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Conserved domains on  [gi|489115803|ref|WP_003025652|]
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MULTISPECIES: PTS ascorbate transporter subunit IIC [Citrobacter]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK09548 super family cl28458
PTS ascorbate-specific subunit IIBC;
1-462 0e+00

PTS ascorbate-specific subunit IIBC;


The actual alignment was detected with superfamily member PRK09548:

Pssm-ID: 236559 [Multi-domain]  Cd Length: 602  Bit Score: 613.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   1 MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGIN 80
Cdd:PRK09548   1 METLYEIFLNFFSQVIGKAPLLLGLVACIGYLLLKKDTTTIIKGTIKTIVGFMLVQVGAGTLVAGFKPVIEALSLYHGLT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  81 GAISDTYASMMATIERMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTII 160
Cdd:PRK09548  81 GAVIDPYTSMQATLETMGDNYAWVGYAVLLALFLNILLVVFRRITGIRTIMLTGHIMFQQAGLIAVFYHVLGASMWETVI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 161 CTAVLVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM 240
Cdd:PRK09548 161 YGAVLMALYWGISSNIMNKPTQQVTGGAGFSIGHQQQVASWIATKIAPKLGDKEDSVDDLKLPKWLHIFHDSIVATAIVM 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 241 TIFFGAILLSFGIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYS 320
Cdd:PRK09548 241 TVFFGIILLSFGLDNLQIMAGKTHWFIYILETGLKFAVAIQVIVIGVRMFVAELSESFKGISERVIPNAVLAIDCAAIYA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 321 FAPNAVVWGFMWGTIGQLIAVGILVA-------CGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIF 393
Cdd:PRK09548 321 YSPNAVVFGFMWGAIGQFLAVGILIAfnlkgidVDAPIIIIPGFIPMFFSNATIGVFANHFGGWKAVMKICFVMGIIEVL 400
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489115803 394 GCVWAVKL-------TGMSAWMGMADWSILAPPMMQGFASIGIVFMAVIILIALAYMFFAGRTLRAEEDAEKQLAE 462
Cdd:PRK09548 401 GSAWVIQLianisqgTQFNGWMGMADWALGFPPILQGLVGSKSAFFFVLLALALVYMIFASKQLRAKEAAAAAGGK 476
 
Name Accession Description Interval E-value
PRK09548 PRK09548
PTS ascorbate-specific subunit IIBC;
1-462 0e+00

PTS ascorbate-specific subunit IIBC;


Pssm-ID: 236559 [Multi-domain]  Cd Length: 602  Bit Score: 613.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   1 MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGIN 80
Cdd:PRK09548   1 METLYEIFLNFFSQVIGKAPLLLGLVACIGYLLLKKDTTTIIKGTIKTIVGFMLVQVGAGTLVAGFKPVIEALSLYHGLT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  81 GAISDTYASMMATIERMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTII 160
Cdd:PRK09548  81 GAVIDPYTSMQATLETMGDNYAWVGYAVLLALFLNILLVVFRRITGIRTIMLTGHIMFQQAGLIAVFYHVLGASMWETVI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 161 CTAVLVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM 240
Cdd:PRK09548 161 YGAVLMALYWGISSNIMNKPTQQVTGGAGFSIGHQQQVASWIATKIAPKLGDKEDSVDDLKLPKWLHIFHDSIVATAIVM 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 241 TIFFGAILLSFGIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYS 320
Cdd:PRK09548 241 TVFFGIILLSFGLDNLQIMAGKTHWFIYILETGLKFAVAIQVIVIGVRMFVAELSESFKGISERVIPNAVLAIDCAAIYA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 321 FAPNAVVWGFMWGTIGQLIAVGILVA-------CGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIF 393
Cdd:PRK09548 321 YSPNAVVFGFMWGAIGQFLAVGILIAfnlkgidVDAPIIIIPGFIPMFFSNATIGVFANHFGGWKAVMKICFVMGIIEVL 400
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489115803 394 GCVWAVKL-------TGMSAWMGMADWSILAPPMMQGFASIGIVFMAVIILIALAYMFFAGRTLRAEEDAEKQLAE 462
Cdd:PRK09548 401 GSAWVIQLianisqgTQFNGWMGMADWALGFPPILQGLVGSKSAFFFVLLALALVYMIFASKQLRAKEAAAAAGGK 476
UlaA COG3037
Ascorbate-specific PTS system IIC component UlaA [Carbohydrate transport and metabolism];
6-437 1.71e-144

Ascorbate-specific PTS system IIC component UlaA [Carbohydrate transport and metabolism];


Pssm-ID: 442271  Cd Length: 430  Bit Score: 419.92  E-value: 1.71e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   6 NIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISD 85
Cdd:COG3037    2 SILNFIVNNILGQPAILIGLIALIGLLLQKKPFSDVISGTIKTIVGFLILSAGAGILVGSLTPFGEMFNKAFGLQGVVPN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  86 TYASMMATIERMGdaySWVGYAVLLALALNIcyvLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTIICTAVL 165
Cdd:COG3037   82 NEAIVAAAQEKYG---SEVALIMLFGFIINI---LLARFTKFKYIFLTGHHMLYMACLLAVILVVAGLSGWELIIVGGIL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 166 VSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFG 245
Cdd:COG3037  156 LGLYWAVSPALAQPFMRKITGNDDFAIGHFGTLGYWLSGKIGKLVGKKEKSTEDIKLPKWLSFLRDSTVSTALTMTIFYL 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 246 AILLSFGIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNA 325
Cdd:COG3037  236 IIALFAGPDYVEELSGGTNFIVYALLQALTFAAGVYILLQGVRMFLAEIVPAFKGISEKLVPGAKPALDCPVVFPYAPNA 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 326 VVWGFMWGTIGQLIAVGILVACGsSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMS 405
Cdd:COG3037  316 VLIGFLSSFIGGLVGMLLLGLLG-LVVIIPGVVPHFFDGATAGVFGNATGGRRGAIIGGFVNGILITFLPALLLPVLGSL 394
                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 489115803 406 ----AWMGMADWSILAPPMMQGFASIGIVFMAVIIL 437
Cdd:COG3037  395 gfagTTFGDADFAVVGIILGLIAKLFGGIGIIIIIV 430
EIIC-GAT pfam03611
PTS system sugar-specific permease component; This family includes bacterial transmembrane ...
14-411 2.29e-98

PTS system sugar-specific permease component; This family includes bacterial transmembrane proteins with a putative sugar-specific permease function, including and analogous to the IIC component of the PTS system. It has been suggested that this permease may form part of an L-ascorbate utilization pathway, with proposed specificity for 3-keto-L-gulonate (formed by hydrolysis of L-ascorbate). This family includes the IIC component of the galactitol specific GAT family PTS system.


Pssm-ID: 460988  Cd Length: 397  Bit Score: 300.99  E-value: 2.29e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   14 QVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAI--SDTYASMM 91
Cdd:pfam03611   1 NILGGPAILVGLIIFIGLLLLKKKFSKAIKGTLKTGIGFLGLNAGAGLLVSSLGPAAQAFVEAFGLNLVGwpNEAIVAWA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   92 ATIERmgdaYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTIICTAVLVSLYWG 171
Cdd:pfam03611  81 SPQVY----GSEAALIMLLGFIVNILLARFTKTKTLKYIWLTGHHMFWGALVYAVTLYVAGFGNLWLVIIGGLILGLYML 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  172 ITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFgaiLLSF 251
Cdd:pfam03611 157 VLPALTQPFVRKITGNDGVALGHFSTIGYALAGLLGKLFGKKEKSTEKIKLPKKLGFFGDPMVSGAILMLILG---LLAA 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  252 GIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFM 331
Cdd:pfam03611 234 LFAGPAALSGGYNFVVYILTQGITFAAGMVIIPRGVRMFMEELVPAFKGISEKLVPGAKPALDCAVVFGYAPNAVTIGFI 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  332 WGTIGQLIAVGILVACGSSIlIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGmsaWMGMA 411
Cdd:pfam03611 314 LSPIGGLLAMFILGGLGSAV-ILPGVLPLFFLGATAGVFANATGGRRGAIIGSFINGLLILFLPTLLAPLLG---QLGMA 389
 
Name Accession Description Interval E-value
PRK09548 PRK09548
PTS ascorbate-specific subunit IIBC;
1-462 0e+00

PTS ascorbate-specific subunit IIBC;


Pssm-ID: 236559 [Multi-domain]  Cd Length: 602  Bit Score: 613.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   1 MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGIN 80
Cdd:PRK09548   1 METLYEIFLNFFSQVIGKAPLLLGLVACIGYLLLKKDTTTIIKGTIKTIVGFMLVQVGAGTLVAGFKPVIEALSLYHGLT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  81 GAISDTYASMMATIERMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTII 160
Cdd:PRK09548  81 GAVIDPYTSMQATLETMGDNYAWVGYAVLLALFLNILLVVFRRITGIRTIMLTGHIMFQQAGLIAVFYHVLGASMWETVI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 161 CTAVLVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM 240
Cdd:PRK09548 161 YGAVLMALYWGISSNIMNKPTQQVTGGAGFSIGHQQQVASWIATKIAPKLGDKEDSVDDLKLPKWLHIFHDSIVATAIVM 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 241 TIFFGAILLSFGIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYS 320
Cdd:PRK09548 241 TVFFGIILLSFGLDNLQIMAGKTHWFIYILETGLKFAVAIQVIVIGVRMFVAELSESFKGISERVIPNAVLAIDCAAIYA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 321 FAPNAVVWGFMWGTIGQLIAVGILVA-------CGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIF 393
Cdd:PRK09548 321 YSPNAVVFGFMWGAIGQFLAVGILIAfnlkgidVDAPIIIIPGFIPMFFSNATIGVFANHFGGWKAVMKICFVMGIIEVL 400
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489115803 394 GCVWAVKL-------TGMSAWMGMADWSILAPPMMQGFASIGIVFMAVIILIALAYMFFAGRTLRAEEDAEKQLAE 462
Cdd:PRK09548 401 GSAWVIQLianisqgTQFNGWMGMADWALGFPPILQGLVGSKSAFFFVLLALALVYMIFASKQLRAKEAAAAAGGK 476
ulaA PRK09410
PTS system ascorbate-specific transporter subunit IIC; Reviewed
5-461 2.88e-159

PTS system ascorbate-specific transporter subunit IIC; Reviewed


Pssm-ID: 236502  Cd Length: 452  Bit Score: 458.18  E-value: 2.88e-159
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   5 YNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAIS 84
Cdd:PRK09410   1 MNIFLFFINNILTQPAILVGLIALIGLILQKKPASDVIKGTLKTIIGFLILGAGAGILVSSLKPFGTMFQEAFGIQGVVP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  85 DTYASMMATIERMGDAYSWVgyaVLLALALNIcyvLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTIICTAV 164
Cdd:PRK09410  81 NNEAIVAAAQKKFGSATALI---MLLGFLINI---LLARFTPFKYIFLTGHHMFQMACLIAVILSVAGLSGWGLIIFGGL 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 165 LVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFF 244
Cdd:PRK09410 155 LLGLYWAISPAITQKYTRKVTGNDGFAIGHFQSLGYWLAGKVGKLFGKKEKSTEDIKLPKSLSFLRDSTVSTAITMTIFF 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 245 GAILLSFGIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPN 324
Cdd:PRK09410 235 LIAALFAGIEYVEEMAGGQNFIVYILMQGLTFAAGVFIILQGVRMFLAELVPAFQGISEKLVPGAKPALDCPAVFPYAPN 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 325 AVVWGFMWGTIGQLIAVGILVACGsSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGM 404
Cdd:PRK09410 315 AVLIGFLSSFIGGLIGMGILGAFG-SVVIIPGFIPHFFCGATAGVFGNATGGWRGAIIGAFVNGLLITFLPALLLPVLGS 393
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 489115803 405 SAWMG--MADWSILAPPMMQGFASIGIVFMAVIILIALAYMFFAGRTLRAEEDAEKQLA 461
Cdd:PRK09410 394 LGMANttFGDWDFGAPGILLGFLAKLFGIIGIIIVIALALLVLAGRALRKKEDAEKQLA 452
UlaA COG3037
Ascorbate-specific PTS system IIC component UlaA [Carbohydrate transport and metabolism];
6-437 1.71e-144

Ascorbate-specific PTS system IIC component UlaA [Carbohydrate transport and metabolism];


Pssm-ID: 442271  Cd Length: 430  Bit Score: 419.92  E-value: 1.71e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   6 NIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISD 85
Cdd:COG3037    2 SILNFIVNNILGQPAILIGLIALIGLLLQKKPFSDVISGTIKTIVGFLILSAGAGILVGSLTPFGEMFNKAFGLQGVVPN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  86 TYASMMATIERMGdaySWVGYAVLLALALNIcyvLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTIICTAVL 165
Cdd:COG3037   82 NEAIVAAAQEKYG---SEVALIMLFGFIINI---LLARFTKFKYIFLTGHHMLYMACLLAVILVVAGLSGWELIIVGGIL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 166 VSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFG 245
Cdd:COG3037  156 LGLYWAVSPALAQPFMRKITGNDDFAIGHFGTLGYWLSGKIGKLVGKKEKSTEDIKLPKWLSFLRDSTVSTALTMTIFYL 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 246 AILLSFGIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNA 325
Cdd:COG3037  236 IIALFAGPDYVEELSGGTNFIVYALLQALTFAAGVYILLQGVRMFLAEIVPAFKGISEKLVPGAKPALDCPVVFPYAPNA 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 326 VVWGFMWGTIGQLIAVGILVACGsSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMS 405
Cdd:COG3037  316 VLIGFLSSFIGGLVGMLLLGLLG-LVVIIPGVVPHFFDGATAGVFGNATGGRRGAIIGGFVNGILITFLPALLLPVLGSL 394
                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 489115803 406 ----AWMGMADWSILAPPMMQGFASIGIVFMAVIIL 437
Cdd:COG3037  395 gfagTTFGDADFAVVGIILGLIAKLFGGIGIIIIIV 430
PRK12997 PRK12997
PTS sugar transporter subunit IIC;
1-444 1.79e-123

PTS sugar transporter subunit IIC;


Pssm-ID: 237262  Cd Length: 466  Bit Score: 367.72  E-value: 1.79e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   1 MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGIN 80
Cdd:PRK12997   1 MEFLMTVLNFFIQNILGTPAILVGLIVLIGYILLKKSFSDVITGTIKTTVGFLILNVGAGGLVTTLRPFLAAFSKAFGLK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  81 GAISDTYASMMATIERMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIA--VSFYIFGYSMWTT 158
Cdd:PRK12997  81 GVVIDPYAGLAAAQTALGSEFPYVSLILLIGFIVNILLAALRRFTKFKYIFLTGHIMVQQAATVLllVLLLIPGFRNVFG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 159 ---IICTAVLVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVS 235
Cdd:PRK12997 161 vqlIIIGGIILGVYWAVSPALAQPFMRKITGNDGFAIGHQQMFGYWFSGKIAGKFGKKEKSTENLKLPKWLSIFRDTVVA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 236 TAIVMTIFFGAILLSFGIDVVQAMA------GKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGA 309
Cdd:PRK12997 241 IAIVMLVFFGIILLAAGPDIMANVDliakgtGGQNWFMYIIIQALTFSVGVFILLQGVRMFVGELVPAFKGISDKLIPGA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 310 VLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGM 389
Cdd:PRK12997 321 KPAVDVPAVFPFAPNAVLIGFIFGTIGGLIGMGILIVFKSPIVIIPGFVPLFFDGATAGVFGNARGGWRGAIIGSFLSGI 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 489115803 390 IEIFGCVWAVKLTGMSA---WMGMADWSILAPPMMQGFASIGIVFMAVIILIALAYMF 444
Cdd:PRK12997 401 LITFLPALAVPLLGLAKyggWHGNTDWDTDWPAFGLLLKYIGLGGYLLLAIPQLQFAK 458
EIIC-GAT pfam03611
PTS system sugar-specific permease component; This family includes bacterial transmembrane ...
14-411 2.29e-98

PTS system sugar-specific permease component; This family includes bacterial transmembrane proteins with a putative sugar-specific permease function, including and analogous to the IIC component of the PTS system. It has been suggested that this permease may form part of an L-ascorbate utilization pathway, with proposed specificity for 3-keto-L-gulonate (formed by hydrolysis of L-ascorbate). This family includes the IIC component of the galactitol specific GAT family PTS system.


Pssm-ID: 460988  Cd Length: 397  Bit Score: 300.99  E-value: 2.29e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   14 QVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAI--SDTYASMM 91
Cdd:pfam03611   1 NILGGPAILVGLIIFIGLLLLKKKFSKAIKGTLKTGIGFLGLNAGAGLLVSSLGPAAQAFVEAFGLNLVGwpNEAIVAWA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803   92 ATIERmgdaYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTIICTAVLVSLYWG 171
Cdd:pfam03611  81 SPQVY----GSEAALIMLLGFIVNILLARFTKTKTLKYIWLTGHHMFWGALVYAVTLYVAGFGNLWLVIIGGLILGLYML 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  172 ITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFgaiLLSF 251
Cdd:pfam03611 157 VLPALTQPFVRKITGNDGVALGHFSTIGYALAGLLGKLFGKKEKSTEKIKLPKKLGFFGDPMVSGAILMLILG---LLAA 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  252 GIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFM 331
Cdd:pfam03611 234 LFAGPAALSGGYNFVVYILTQGITFAAGMVIIPRGVRMFMEELVPAFKGISEKLVPGAKPALDCAVVFGYAPNAVTIGFI 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  332 WGTIGQLIAVGILVACGSSIlIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGmsaWMGMA 411
Cdd:pfam03611 314 LSPIGGLLAMFILGGLGSAV-ILPGVLPLFFLGATAGVFANATGGRRGAIIGSFINGLLILFLPTLLAPLLG---QLGMA 389
ulaA PRK12996
PTS ascorbate transporter subunit IIC;
11-393 2.24e-37

PTS ascorbate transporter subunit IIC;


Pssm-ID: 171824  Cd Length: 463  Bit Score: 142.37  E-value: 2.24e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  11 FFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASM 90
Cdd:PRK12996   9 FVVDILKVPSVLVGLIALIGLVAQKKAFSDVVKGTIKTILGFIVLGGGATVLVGSLNPLGGMFEHAFNIQGIIPNNEAIV 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803  91 MATIERMGdayswVGYAVLLALALnICYVLLRRITGIRTIMLTGHIMFQQAGLIAVSFYIFGYSMWTTIICTAVLVSLYW 170
Cdd:PRK12996  89 SIALEKYG-----ASTALIMAFGM-VANIVVARFTRLKYIFLTGHHTFYMACMIGVILTVAGFEGVGLVFTGSLILGLVM 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 171 GITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLS 250
Cdd:PRK12996 163 AFFPALAQRYMRRITGTDDIAFGHFGTLGYVLSGWIGSLCGKGSRSTEEMNLPKNLSFLRDSSISISLTMMIIYLIMAVS 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489115803 251 FGIDVVQA-MAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWG 329
Cdd:PRK12996 243 AGREYVEAtFSGGQNYLVYAIIMAITFAAGVFIILQGVRLILAEIVPAFTGFSEKLVPNARPALDCPVVYPYAPNAVLIG 322
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489115803 330 FMWGTIGQLIAVgILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIF 393
Cdd:PRK12996 323 FLFSFLGGLVGL-FLLGQMKLVLILPGVVPHFFTGATAGVFGNATGGRRGAMIGAFANGLLITF 385
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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