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Conserved domains on  [gi|489113952|ref|WP_003023804|]
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MULTISPECIES: F0F1 ATP synthase subunit gamma [Citrobacter]

Protein Classification

FoF1 ATP synthase subunit gamma( domain architecture ID 10792582)

FoF1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 2.13e-177

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 490.39  E-value: 2.13e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNlEYKHPYLEERDVKRVGYLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  81 VSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 161 DEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELkrKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEE--TSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 489113952 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK05621 238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 2.13e-177

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 490.39  E-value: 2.13e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNlEYKHPYLEERDVKRVGYLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  81 VSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 161 DEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELkrKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEE--TSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 489113952 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK05621 238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 8.96e-167

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 463.47  E-value: 8.96e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  81 VSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 161 DEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELKRKS-WDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASE 239
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETrADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 489113952 240 QAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-287 1.46e-150

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 422.47  E-value: 1.46e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952    2 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   82 STDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAYD 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  162 EGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQA 241
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 489113952  242 ARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
ATP-synt pfam00231
ATP synthase;
5-286 5.76e-150

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 420.78  E-value: 5.76e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952    5 KEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVVSTD 84
Cdd:pfam00231   3 KEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVITSD 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   85 RGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGM-GDNPSLSELIGPVKVMLQAYDEG 163
Cdd:pfam00231  83 RGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSlGDKPTFEEAAEIADELLDAFLAG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  164 RLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAAR 243
Cdd:pfam00231 163 EIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAAR 242

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 489113952  244 MVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASA 286
Cdd:pfam00231 243 MTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-284 6.45e-128

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 364.98  E-value: 6.45e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   2 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVV 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  82 STDRGLCGGLNINLFKKLLADMKTwsDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAYD 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 162 EGRLDRLYVVSNKFINTMSQTPTITQLLPL-PASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLdKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 489113952 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGA 284
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 2.13e-177

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 490.39  E-value: 2.13e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNlEYKHPYLEERDVKRVGYLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  81 VSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 161 DEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELkrKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEE--TSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 489113952 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK05621 238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 8.96e-167

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 463.47  E-value: 8.96e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  81 VSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 161 DEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELKRKS-WDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASE 239
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETrADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 489113952 240 QAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-287 1.46e-150

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 422.47  E-value: 1.46e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952    2 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   82 STDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAYD 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  162 EGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQA 241
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 489113952  242 ARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
ATP-synt pfam00231
ATP synthase;
5-286 5.76e-150

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 420.78  E-value: 5.76e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952    5 KEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVVSTD 84
Cdd:pfam00231   3 KEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVITSD 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   85 RGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGM-GDNPSLSELIGPVKVMLQAYDEG 163
Cdd:pfam00231  83 RGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSlGDKPTFEEAAEIADELLDAFLAG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  164 RLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAAR 243
Cdd:pfam00231 163 EIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAAR 242

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 489113952  244 MVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASA 286
Cdd:pfam00231 243 MTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-284 6.45e-128

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 364.98  E-value: 6.45e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   2 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVV 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  82 STDRGLCGGLNINLFKKLLADMKTwsDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQAYD 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 162 EGRLDRLYVVSNKFINTMSQTPTITQLLPL-PASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLdKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 489113952 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGA 284
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-287 1.11e-97

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 288.62  E-value: 1.11e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLA--NGNLEYKHPYLEER-DVKRVG 77
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTarTVGAARVGPLLEKRpTVKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  78 YLVVSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVML 157
Cdd:PRK14111  81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 158 QAYDEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELKRKswDYLYEPDPKALLDTLLRRYVESQVYQGVVENLA 237
Cdd:PRK14111 161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVV--DYTYEPSPEEVLRALLPRFVEVQLYQAVLESIA 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 489113952 238 SEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK14111 239 SEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAAL 288
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-287 2.54e-93

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 277.32  E-value: 2.54e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLV 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPREVKKALLVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  81 VSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLS--ELIGpvKVMLQ 158
Cdd:PRK13423  81 VTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYEtaALLA--QELIE 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 159 AYDEGRLDRLYVVSNKFINTMSQTPTITQLLPL--PASDDDElkrKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENL 236
Cdd:PRK13423 159 GYLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIdpPEAADDE---YLPEYIYEPSRDALLAELLPKHVEVQIYRALLESV 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 489113952 237 ASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK13423 236 ASEHGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-287 1.49e-84

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 255.75  E-value: 1.49e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLV 80
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRDVKRVGYIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  81 VSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGG-NVI--AQVTGMGDNPSLSELIGPVKVML 157
Cdd:PRK13422  81 TSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFAKLKDvNIVatAHYNDKDKEGSIRAIGGAVKVML 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 158 QAYDEGRLDRLYVVSNKFINTMSQTPTITQLLPLP--------ASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVY 229
Cdd:PRK13422 161 DKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQdifsaeeiKANKEKATKGHWDYIYERDIEEVLNALCIRYIEAQVR 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 489113952 230 QGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK13422 241 GAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-287 4.57e-79

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 241.38  E-value: 4.57e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERD-VKRVGYL 79
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPYLRRPEkIRTVALL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  80 VVSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQA 159
Cdd:PRK13427  81 IITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFMER 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 160 YDEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASE 239
Cdd:PRK13427 161 FANESVDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAEGSVQDDVVYEPSPEAILESLLPLVVKTAFLKAILEANASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 489113952 240 QAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK13427 241 QIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADAL 288
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-286 2.47e-72

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 224.24  E-value: 2.47e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERD-VKRVGYL 79
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVREeIKTCGIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  80 VVSTDRGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVI-AQVTGMGD-NPSLSELIGpvKVML 157
Cdd:PRK13424  81 LITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVtAYADQMTSfDFQLANSIG--LEVI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 158 QAYDEGRLDRLYVVSNKFINTMSQTPTITQLLPL-PASDDDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENL 236
Cdd:PRK13424 159 DGYLTGELDEVVLVYGEFVSMARQLPITLQILPIaPEEAEEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGLLDTS 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 489113952 237 ASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASA 286
Cdd:PRK13424 239 ASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEA 288
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 5-287 1.82e-68

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 214.25  E-value: 1.82e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   5 KEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLVVSTD 84
Cdd:PRK14110   7 RDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLERREEKNVDLVIITAD 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  85 RGLCGGLNINLFKKLLADMKTWSDKGVQCDIAMIGSKGVSFFNSVGGNVIA---QVTGMGDNPSLSELIGpvKVMLQAYD 161
Cdd:PRK14110  87 RGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIKsyeDVFRKEINFSVVKEVG--GILASRYI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 162 EGRLDRLYVVSNKFINTMSQTPTITQLLPL-PASDDDELKRKSwDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ 240
Cdd:PRK14110 165 EEETDAVYLINNEMITRATYKPKVRKFLPFeVEAQEKKLDELS-VYNIEVSEEEFLDKLLQLYLNYQLYRALVESNAAEH 243

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 489113952 241 AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK14110 244 FARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAM 290
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-287 8.82e-66

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 207.36  E-value: 8.82e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEER-DVKRVGYL 79
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDTSLNPLLSPRsEVNKVLVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  80 VVSTDRGLCGGLNINLFK---KLLADmkTWSDKGVQCDIAMI--GSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVK 154
Cdd:PRK13425  81 LITSDRGLCGAFNTNIIKlaqKVIHE--DYAALHAKGGVSMIcaGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIAE 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 155 VMLQAYDEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASDDDelKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVE 234
Cdd:PRK13425 159 TASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPG--AEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLE 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489113952 235 NLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV 287
Cdd:PRK13425 237 SNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADAL 289
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-286 8.57e-65

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 204.63  E-value: 8.57e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952   1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGNLEYKHPYLEERDVKRVGYLV 80
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDVESPFTVERPVKRVAIVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952  81 VSTDRGLCGGLNINLFKKLLADMKTWSDKGvQCDIAM--IGSKGVSFFNSVGGNVIAQVTGMGDNPSLSELIGPVKVMLQ 158
Cdd:PRK13426  81 FSSNTSLCGGFNANIIKLLLQTIGEYRTLG-QDNILIypVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLME 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489113952 159 AYDEGRLDRLYVVSNKFINTMSQTPTITQLLPLPASD---DDELKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVEN 235
Cdd:PRK13426 160 LFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQeknAEHAGGVANDYIIEPSADTVLNDLIPKLLSLKIYTALLDS 239

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 489113952 236 LASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASA 286
Cdd:PRK13426 240 NASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMA 290
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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