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Conserved domains on  [gi|489082687|ref|WP_002992607|]
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DUF3272 family protein [Streptococcus pyogenes]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3272 super family cl13176
Protein of unknown function (DUF3272); This family of proteins with unknown function appears ...
 2-58 1.34e-13

Protein of unknown function (DUF3272); This family of proteins with unknown function appears to be restricted to Streptococcus.


The actual alignment was detected with superfamily member pfam11676:

Pssm-ID: 431996  Cd Length: 61  Bit Score: 58.68  E-value: 1.34e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 489082687   2 TIRQFLFMAFVCAFETYFFNDLLLSGNYLFALFWGLLLFRDLRRVHTINQLTKTILK 58
Cdd:pfam11676  1 NKPQFIFMALTTILETYFFNASIMTGDFIIAGFWAFLLYRNLHFAYKVTKFIRLVEK 57
 
Name Accession Description Interval E-value
DUF3272 pfam11676
Protein of unknown function (DUF3272); This family of proteins with unknown function appears ...
 2-58 1.34e-13

Protein of unknown function (DUF3272); This family of proteins with unknown function appears to be restricted to Streptococcus.


Pssm-ID: 431996  Cd Length: 61  Bit Score: 58.68  E-value: 1.34e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 489082687   2 TIRQFLFMAFVCAFETYFFNDLLLSGNYLFALFWGLLLFRDLRRVHTINQLTKTILK 58
Cdd:pfam11676  1 NKPQFIFMALTTILETYFFNASIMTGDFIIAGFWAFLLYRNLHFAYKVTKFIRLVEK 57
 
Name Accession Description Interval E-value
DUF3272 pfam11676
Protein of unknown function (DUF3272); This family of proteins with unknown function appears ...
 2-58 1.34e-13

Protein of unknown function (DUF3272); This family of proteins with unknown function appears to be restricted to Streptococcus.


Pssm-ID: 431996  Cd Length: 61  Bit Score: 58.68  E-value: 1.34e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 489082687   2 TIRQFLFMAFVCAFETYFFNDLLLSGNYLFALFWGLLLFRDLRRVHTINQLTKTILK 58
Cdd:pfam11676  1 NKPQFIFMALTTILETYFFNASIMTGDFIIAGFWAFLLYRNLHFAYKVTKFIRLVEK 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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