|
Name |
Accession |
Description |
Interval |
E-value |
| PQQ_membr_DH |
TIGR03074 |
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; This protein ... |
35-787 |
0e+00 |
|
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Pssm-ID: 274418 [Multi-domain] Cd Length: 764 Bit Score: 1102.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 35 KLALVGGTLYFALMGVVMVIAAVLIFRNRRGGILLYAVAFIASVIWAISDAGWNYWPLFSRLFALGVLAFLAALvwPFLA 114
Cdd:TIGR03074 1 WLVALGGSWYYLLAGLALLLSAWLLFRRRPAGLWLYAALLLGTLIWALWEVGLDFWPLIPRLGLIAVLGLWLLL--PWVR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 115 SP---PAKKGPAYGVAAVLAVALAVSFGWMFKSAPLVSA---TEAVPVKPVAPGEQQKNWAHWGNTTHGDRFAALDQINK 188
Cdd:TIGR03074 79 RPrsvGPARRGAGALAGVLAVAVLAALASMFTDPHPIVGaldTEVPATAAAAPAVPAGDWAAYGRTQAGQRYSPLDQINP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 189 QNVNQLQVAWVAHTGDIPQSNGSG-AEDQNTPLQIGDTLYVCTPYSKVLALDVDSGKEKWRYDSKS---SSPNWQRCRGL 264
Cdd:TIGR03074 159 DNVGNLKVAWTYHTGDLKTPDDPGeATFQATPLKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLkteADRQHQTCRGV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 265 GYYADSQAQTAQASGTQPAACSRRLFLPTIDARLIAIDADTGKLCESFGDRGIVDLSVGMGEVKAGYYQQTSTPLVAGNV 344
Cdd:TIGR03074 239 SYYDAPAAAAGPAGPAAPADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGPTPPGYYYPTSPPLVAGTT 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 345 VVVGGRVADNYSTGEPPGVVRAFDVHTGKLAWAWDPGNPALTGVPPEGQTYTRGTPNVWSAMSYDAKLNLIYLPTGNATP 424
Cdd:TIGR03074 319 VVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNSPNSWSVASYDEKLGLVYLPMGNQTP 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 425 DFFGGERTALDDKYSSSIVAVDATTGQVRWHFQTTHHDLWDFDLPSQPLLYDLPDGKGGTTPVLVQTSKQGMIFMLNRET 504
Cdd:TIGR03074 399 DQWGGDRTPADEKYSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPKADGTTVPALVAPTKQGQIYVLDRRT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 505 GEPVAKVEERPVPAGNVKGERYSPTQPYSVgmPMIGNQTLTESDMWGATPIDLLLCRIQFKEMRHQGVFTPPGEDRSLQF 584
Cdd:TIGR03074 479 GEPIVPVEEVPVPQGAVPGERYSPTQPFSV--LTFGPPTLTESDMWGATPFDQLACRIQFKSLRYEGLYTPPSEQGSLVF 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 585 PGSLGGMNWGSVSLDPNNSLMFVNDMRLGLANYMVPRAKVAK-----DASGIEMGIVPMEGTPFGAMRERFLSPLGIPCQ 659
Cdd:TIGR03074 557 PGNLGGFNWGGVAVDPTRQVMFVNPMRLPFVSQLVPRAPGDEapsgaKGKGTEMGLNPNKGTPYAVNMNPFLSPLGIPCQ 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 660 KPPFGTMFAVDLKTGKLVWQVPVGTVEDTGPLGIRMHMPIPIGMPTLGASLATQSGLLFFAGTQDFYLRAFDTANGKEIW 739
Cdd:TIGR03074 637 APPWGYMAAIDLKTGKVVWQHPNGTVRDTGPMGIPMPLPIPIGVPTLGGPLATAGGLVFIGATQDNYLRAYDLSTGKELW 716
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 488996855 740 KSRLPVGSQSGPMTYVsPKTGKQYIIINAGGARQS-PDRGDYIIAYALP 787
Cdd:TIGR03074 717 EARLPAGGQATPMTYM-GKDGKQYVVIVAGGHGSSgTKRGDYVIAYALP 764
|
|
| PQQ_mGDH |
cd10280 |
Membrane-bound PQQ-dependent glucose dehydrogenase; This bacterial subfamily of enzymes ... |
168-786 |
0e+00 |
|
Membrane-bound PQQ-dependent glucose dehydrogenase; This bacterial subfamily of enzymes belongs to the dehydrogenase family with pyrroloquinoline quinone (PQQ) as cofactor, and is the only subfamily that is bound to the membrane. Glucose dehydrogenase converts D-glucose to D-glucono-1,5-lactone in a reaction that is coupled with the respiratory chain in the periplasmic oxidation of sugars and alcohols in gram-negative bacteria. Ubiquinone functions as the electron acceptor. The alignment model contains an 8-bladed beta-propeller.
Pssm-ID: 199838 [Multi-domain] Cd Length: 616 Bit Score: 926.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 168 WAHWGNTTHGDRFAALDQINKQNVNQLQVAWVAHTGDIPQSNGSGAEDQNTPLQIGDTLYVCTPYSKVLALDVDSGKEKW 247
Cdd:cd10280 1 WPAYGGDPGGTRYSPLDQITPDNVGKLKVAWTYHTGDLPGPDGNEGTFEATPLKVGGTLYLCTPHNRVIALDAATGKELW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 248 RYDSKS---SSPNWQRCRGLGYYADSQAqtaqasgtqPAACSRRLFLPTIDARLIAIDADTGKLCESFGDRGIVDLSVGM 324
Cdd:cd10280 81 RFDPKAgadAAPGHQTCRGVSYWEDGAA---------AAACARRIFFGTGDARLIALDARTGKPCPDFGDNGVVDLREGL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 325 GEVKAGYYQQTSTPLVAGNVVVVGGRVADNYSTGEPPGVVRAFDVHTGKLAWAWDPGNPALTGVPP-EGQTYTRGTPNVW 403
Cdd:cd10280 152 GRVKPGFYSSTSPPTVYGDLVIVGSAVADNQAVDAPSGVIRAFDVRTGKLVWAFDTIPPPGEAGPDtAGAWYTRGGPNVW 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 404 SAMSYDAKLNLIYLPTGNATPDFFGGERTAlDDKYSSSIVAVDATTGQVRWHFQTTHHDLWDFDLPSQPLLYDLPdGKGG 483
Cdd:cd10280 232 AGMSADEKLGLVYLPTGSATPDFYGGDRPG-DNLFANSLVALDAATGKRRWHFQTVHHDLWDYDLPAQPTLVDVP-RDGK 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 484 TTPVLVQTSKQGMIFMLNRETGEPVAKVEERPVPAGNVKGERYSPTQPYSVGMPMIGNQTLTESDMWGATPIDLLLCRIQ 563
Cdd:cd10280 310 TVPAVAQPTKQGFVFVLDRRTGKPLWPVEERPVPQGDVPGERTSPTQPFPTLPPPFARQGLTEDDMWGATPFDQLACRIQ 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 564 FKEMRHQGVFTPPGEDRSLQFPGSLGGMNWGSVSLDPNNSLMFVNDMRLGLANYMVPRAKVAKDASGIEM-------GIV 636
Cdd:cd10280 390 FRSLRYEGLFTPPSLDGTLIFPGNDGGANWGGAAVDPERGILYVNSNRLPFVIQLVPRAPGDPAGVAGGGeggggggGPS 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 637 PMEGTPFGAMRERFLSPLGIPCQKPPFGTMFAVDLKTGKLVWQVPVGTVEDTGPLGIrmHMPIPIGMPTLGASLATQSGL 716
Cdd:cd10280 470 PQAGTPYGVGRGRFLSPLGLPCQAPPWGTLTAIDLNTGKILWQVPLGTVPDLGPKGI--PLPIPTGTPNLGGPVVTAGGL 547
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488996855 717 LFFAGTQDFYLRAFDTANGKEIWKSRLPVGSQSGPMTYVSpkTGKQYIIINAGGARQ-SPDRGDYIIAYAL 786
Cdd:cd10280 548 VFIAATQDNYLRAFDKATGKELWEARLPAGGQATPMTYEV--DGKQYVVIAAGGHGSlGTKRGDSVIAYAL 616
|
|
| Gcd |
COG4993 |
Glucose dehydrogenase, PQQ-dependent [Carbohydrate transport and metabolism]; |
165-787 |
0e+00 |
|
Glucose dehydrogenase, PQQ-dependent [Carbohydrate transport and metabolism];
Pssm-ID: 444017 [Multi-domain] Cd Length: 515 Bit Score: 602.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 165 QKNWAHWGNTTHGDRFAALDQINKQNVNQLQVAWVAHTGDIPQSngsgaEDQNTPLQIGDTLYVCTPYSKVLALDVDSGK 244
Cdd:COG4993 2 PGDWLAYGGDYAGQRYSPLDQINPDNVKKLKVAWTFSTGDLPER-----GHEATPLVVDGVLYVCTPHNRVFALDAATGK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 245 EKWRYDSK---SSSPNWQRCRGLGYYADsqaqtaqasgtqpaacsrRLFLPTIDARLIAIDADTGKLCESfgdrgivdls 321
Cdd:COG4993 77 ELWRYDPKlpdDAACCDVVNRGVAYYDG------------------RIFLGTLDGRLVALDAKTGKVCWD---------- 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 322 VGMGEVKAGYYQqTSTPLVAGNVVVVGGRVADNystgEPPGVVRAFDVHTGKLAWAW----DPGNPALTGvPPEGQTYTR 397
Cdd:COG4993 129 VKVGDPKKGYTI-TSAPLVVKDKVIVGGSGGEF----GPRGVVRAYDARTGKLVWRFdtipDPGEPGAET-WPPGDTWKR 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 398 GTPNVWSAMSYDAKLNLIYLPTGNATPDFFGGERtALDDKYSSSIVAVDATTGQVRWHFQTTHHDLWDFDLPSQPLLYDL 477
Cdd:COG4993 203 GGGNVWGTMSYDPELGLVYLPTGNPAPDWNGGQR-PGDNLYSSSIVALDADTGELKWHYQTVPHDLWDYDGPNEPILVDL 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 478 PDGkGGTTPVLVQTSKQGMIFMLNRETGEPVAkveerpvpagnvkgeryspTQPYsVGMPMIGnqtlTESDMWGATPIdl 557
Cdd:COG4993 282 PVD-GKTRKALVQATKNGFIYVLDRETGEPLV-------------------TQPF-VKPPNWA----TEIDMWGATPI-- 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 558 llcriqfkemrhqgvFTPPGED--RSLQFPGSLGGMNWGSVSLDPNNSLMFVNDMRLGLANYMVPRAkvakdasgiemgi 635
Cdd:COG4993 335 ---------------QTPPSLDgkTTLICPGALGGKNWGPAAYDPETGLLYVPANELCMDYELVPRE------------- 386
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 636 vPMEGTPF-GAMRERFlsplgiPCQKPPFGTMFAVDLKTGKLVWQVPVgtvedtgplgirmhmpipiGMPTLGASLATQS 714
Cdd:COG4993 387 -YQAGAPYlGATLTMY------PCPAPPWGTLTAIDLNTGKIVWQVPL-------------------GFPNWGGPLATAG 440
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488996855 715 GLLfFAGTQDFYLRAFDTANGKEIWKSRLPVGSQSGPMTYVspKTGKQYIIINAGGARQSP-----DRGDYIIAYALP 787
Cdd:COG4993 441 GLV-FIGTLDGYLRAFDAKTGKELWKFRLPSGGQATPMTYE--VDGKQYVAVAAGGGGWLGlglytPQGDYLIAFALP 515
|
|
| PQQ_enz_alc_DH |
TIGR03075 |
PQQ-dependent dehydrogenase, methanol/ethanol family; This protein family has a phylogenetic ... |
166-769 |
4.55e-77 |
|
PQQ-dependent dehydrogenase, methanol/ethanol family; This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Pssm-ID: 274419 [Multi-domain] Cd Length: 527 Bit Score: 258.76 E-value: 4.55e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 166 KNWAHWGNTTHGDRFAALDQINKQNVNQLQVAWVAHTGDIpqsngSGAEDQntPLQIGDTLYVCTPYSKVLALDVDSGKE 245
Cdd:TIGR03075 19 SDWLTYGGGYAGQRYSPLDQINTDNVKKLQPAWTFSLGKQ-----RGQESQ--PLVVDGVMYVTTSYSRVYALDAKTGKI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 246 KWRYDSK---SSSPnwQRC-----RGLGYYADsqaqtaqasgtqpaacsrRLFLPTIDARLIAIDADTGKlcesfgdrgi 317
Cdd:TIGR03075 92 LWKYDPKlpdDIIP--VMCcdvvnRGAALYDG------------------KVFFGTLDARLVALDAKTGK---------- 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 318 VDLSVGMGEVKAGYYQqTSTPLVAGNVVVVGGrvadnySTGE--PPGVVRAFDVHTGKLAWAW-----DPGNPALTGVPP 390
Cdd:TIGR03075 142 VVWSKKNGDYKKGYTI-TAAPLVVKGKVITGI------SGGEfgVRGYVTAYDAKTGKLVWRRytvpgDMGYLKKTGKPV 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 391 ---------EGQTYTRGTPNVWSAMSYDAKLNLIYLPTGNATPdfFGGERTALDDKYSSSIVAVDATTGQVRWHFQTTHH 461
Cdd:TIGR03075 215 ggdpgaktwPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPAP--WNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPH 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 462 DLWDFDLPSQPLLYDLP-DGKggTTPVLVQTSKQGMIFMLNRETGEPVAkveerpvpagnvkGERYSPTqpysvgmpmig 540
Cdd:TIGR03075 293 DEWDYDGVNEMILFDLKkDGK--PRKLLAHADRNGFFYVLDRTNGKLLS-------------AEPFVDK----------- 346
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 541 nqtltesDMWgATPIDLLLCRIQFKEmrhQGVFTPPGEDRSLQF-PGSLGGMNWGSVSLDPNNSLMFV--NDMRLGLANY 617
Cdd:TIGR03075 347 -------VNW-ATGVDLKTGRPIEVP---EARSTDGKKGKPVEVcPGFLGGKNWQPMAYSPKTGLFYVpaNHVCMDYWPE 415
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 618 MVPRAKVAKDAsGIEMGIVPMEGTPFGAMRerflsplgipcqkppfgtmfAVDLKTGKLVWQVPvgtvEDtgplgirmhm 697
Cdd:TIGR03075 416 KVSYKKGAAYL-GAGFTIKPPPDDHIGSLI--------------------AWDPITGKIVWEHK----ED---------- 460
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488996855 698 pipigMPTLGASLATqSGLLFFAGTQDFYLRAFDTANGKEIWKSRLPVGSQSGPMTYVspKTGKQYIIINAG 769
Cdd:TIGR03075 461 -----FPLWGGVLAT-AGDLVFTGTLEGYFKAFDAKTGEELWKFKTGSGIVGPPVTYE--QDGKQYVAVLSG 524
|
|
| PQQ_ADH_I |
cd10277 |
Ethanol dehydrogenase, a bacterial quinoprotein (PQQ-dependent type I alcohol dehydrogenase); ... |
166-769 |
1.16e-73 |
|
Ethanol dehydrogenase, a bacterial quinoprotein (PQQ-dependent type I alcohol dehydrogenase); This bacterial family of homodimeric ethanol dehydrogenases utilize pyrroloquinoline quinone (PQQ) as a cofactor. It represents proteins whose expression may be induced by ethanol, and which are similar to quinoprotein methanol dehydrogenases, but have higher specificities for ethanol and other primary and secondary alcohols. Dehydrogenases with PQQ cofactors, such as ethanol, methanol, and membrane-bound glucose dehydrogenases, form an 8-bladed beta-propeller.
Pssm-ID: 199835 [Multi-domain] Cd Length: 529 Bit Score: 249.52 E-value: 1.16e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 166 KNWAHWGNTTHGDRFAALDQINKQNVNQLQVAWVAHTGDIPQsngsGAEDQntPLQIGDTLYVCTPYSKVLALDVDSGKE 245
Cdd:cd10277 9 GNWLTYGRGYNGQRYSPLKQINTDNVKNLVPAWSFSFGGKQR----GQESQ--PIVNDGVMYVTTSYNRVFAIDAKTGKE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 246 KWRYDSKSSSPNWQRC----RGLGYYADsqaqtaqasgtqpaacsrRLFLPTIDARLIAIDADTGKlcesfgdrgiVDLS 321
Cdd:cd10277 83 LWKYKHRLPEDIRPCCdvvnRGVALYGD------------------KVYFGTLDAHLVALDAKTGK----------VVWK 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 322 VGMGEVKAGYYQqTSTPLVAGNVVVVGGrvadnySTGE--PPGVVRAFDVHTGKLAWAW----DPGNPaLTGVPPEGQTY 395
Cdd:cd10277 135 KKVADYKAGYSM-TLAPLVVKGKVIVGV------SGGEfgVRGFIAALDAETGKEVWRTytvpGPGEP-GSTDTWPGDAW 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 396 TRGTPNVWSAMSYDAKLNLIYLPTGNATPDFfGGERTAlDDKYSSSIVAVDATTGQVRWHFQTTHHDLWDFDLPSQPLLY 475
Cdd:cd10277 207 KTGGGATWLTGTYDPETNLLYWGVGNPAPWN-GDLRPG-DNLYTSSVLALDPDTGKIKWHYQYTPNDTWDYDGVNEPVLF 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 476 DLPDgKGGTTPVLVQTSKQGMIFMLNRETGEPVAkveerpvpagnvkgerysptqpysvGMPMIGNQTLTESDMWGATPI 555
Cdd:cd10277 285 DYTK-NGKPVKALVHADRNGFFYVLDRTNGKLIW-------------------------ATPFVKKITWASIDLKTGRPI 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 556 DlllcriqfKEMRhqgvfTPPGEDRSLQF-PGSLGGMNWGSVSLDPNNSLMFVNDMRLGLanyMVPRAKVAKdasgiemg 634
Cdd:cd10277 339 Y--------DEDK-----VPPKKGKTVDFcPSFLGGKNWPPMAYSPDTGLFYVPANHWCM---DLTGEPVSY-------- 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 635 ivpMEGTPFGAMrerflSPLGIPCQKPPFGTMFAVDLKTGKLVWQVPVGTvedtgplgirmhmpipigmPTLGASLATQS 714
Cdd:cd10277 395 ---KKGAAYLGA-----GFTIKPPFEDHIGELQAIDPTTGKKVWEHKTPL-------------------PLWGGVLTTAG 447
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 488996855 715 GLLfFAGTQDFYLRAFDTANGKEIWKSRLPVGSQSGPMTYvsPKTGKQYIIINAG 769
Cdd:cd10277 448 GLV-FTGTPDGYFRAFDAKTGKELWEFQTGSGIIGPPVTW--EVDGKQYVAVLSG 499
|
|
| PQQ_DH_like |
cd00216 |
PQQ-dependent dehydrogenases and related proteins; This family is composed of dehydrogenases ... |
188-770 |
1.07e-71 |
|
PQQ-dependent dehydrogenases and related proteins; This family is composed of dehydrogenases with pyrroloquinoline quinone (PQQ) as a cofactor, such as ethanol, methanol, and membrane-bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller, and the family also includes distantly related proteins which are not enzymatically active and do not bind PQQ.
Pssm-ID: 199833 [Multi-domain] Cd Length: 434 Bit Score: 241.36 E-value: 1.07e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 188 KQNVNQLQVAWVAHTGDIPQsNGSGAedqnTPLQIGDTLYVCTPYSKVLALDVDSGKEKWRYDSKSSsPNWQR------C 261
Cdd:cd00216 1 ADNVFQLTPAWSFSTGDGGN-RGSEL----TPIVVDGVMYATTSFSRVFALDADDGKEIWSYDPALK-DGWFEaccdlvN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 262 RGLGYYAdsqaqtaqasgtqpaacsRRLFLPTIDARLIAIDADTGKLCESFGDRGIvdlsvgmgevkAGYYQQTSTPLVA 341
Cdd:cd00216 75 RGVAVWG------------------GKVYIGVLDGRVYALNAETGKVAWKVKNADV-----------LGGYTATSAPVVV 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 342 GNVVVVGGRVaDNYSTgepPGVVRAFDVHTGKLAWAWDPGNPALTGVPP-------------EGQTYTRGTPNVWSAMSY 408
Cdd:cd00216 126 DGLVIIGSSG-DEFGV---RGYLTAYDVATGEEKWRFYLVMPDPNLLPGkdstvtdrntptgDEHTWTSGGGTGWSSAAY 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 409 DAKLNLIYLPTGNATPDFFGGERTALDDKYSSSIVAVDATTGQVRWHFQTTHHDLWDFDLPSQPLLYDLPDgKGGTTPVL 488
Cdd:cd00216 202 DAELNLIYVGGGNPTPWNWGGNRTPGDNLYTSSIVAVNADTGEMKWQYQTTPHDAWDYDGDNTPVLADIKV-KGKKVKVL 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 489 VQTSKQGMIFMLNRETGEpvakveerpvpagnvkgerysptqpysvgmpmignqtltesdmwgatpidlllcriqfkemr 568
Cdd:cd00216 281 FAPAKNGNFYVLDRRNGE-------------------------------------------------------------- 298
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 569 hqgvftppgedrsLQFPGSLGGMnwgsvSLDPNNSLMFVndmrlglanymvprakvakdasgiemgivpmegtpfgamre 648
Cdd:cd00216 299 -------------LVSARPLVPD-----SYDPDRELFYV----------------------------------------- 319
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 649 rflsplgipcqkPPFGTMFAVDLKTGKLVWQVpvgtvedtgplgirmhmpiPIGMPTLGASLATQSGLLFFaGTQDFYLR 728
Cdd:cd00216 320 ------------PANGRIMALDPVTGVVVWEK-------------------SELHPLLGGPLSTAGNLVFV-GTSDGYLK 367
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 488996855 729 AFDTANGKEIWKSRLPVGSQSGPMTYvsPKTGKQYIIINAGG 770
Cdd:cd00216 368 AYNADTGEKLWQQKVPSGFQAEPVTY--EVDGEQYVLIQAGG 407
|
|
| PQQ_ADH_II |
cd10279 |
PQQ_like domain of the quinohemoprotein alcohol dehydrogenase (type II); This family of ... |
167-769 |
2.11e-64 |
|
PQQ_like domain of the quinohemoprotein alcohol dehydrogenase (type II); This family of monomeric and soluble type II alcohol dehydrogenases utilizes pyrroloquinoline quinone (PQQ) as a cofactor and is related to ethanol, methanol, and membrane-bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Pssm-ID: 199837 [Multi-domain] Cd Length: 549 Bit Score: 224.83 E-value: 2.11e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 167 NWAHWGNTTHGDRFAALDQINKQNVNQLQVAWVAhtgDIPQSNGSGAedqnTPLQIGDTLYVCTPYSKVLALDVDSGKEK 246
Cdd:cd10279 2 NWLSYGRDYDEQRFSPLTQINRSNVGQLGLAWYF---DLDTNRGQEA----TPLVVDGVMYVSGPWSVVYALDARTGKLL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 247 WRYDSKSSsPNWQR---C----RGLGYYADsqaqtaqasgtqpaacsrRLFLPTIDARLIAIDADTGKLCESfgdrgivd 319
Cdd:cd10279 75 WQYDPEVD-RESGRkacCdvvnRGVAVWDG------------------KVFVGTLDGRLIALDAKTGKEVWS-------- 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 320 lsvgmgevkagyyQQTSTPlvagnvvvvggrVADNYSTGEPP------------------GVVRAFDVHTGKLAWAWD-- 379
Cdd:cd10279 128 -------------VDTIDP------------RKPYTITGAPRvakgkvvignggaefgvrGYVSAYDAETGKLVWRFYtv 182
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 380 PGNPALTGVPPEGQ-----------TYTRGTPNVWSAMSYDAKLNLIYLPTGNATP---DFFGGERTalDDKYSSSIVAV 445
Cdd:cd10279 183 PGNPAKPFEHASLEaaaatwwtgewWRTGGGGTVWDSITYDPELDLLYIGTGNGSPwnrKVRSPGGG--DNLFLSSIVAL 260
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 446 DATTGQVRWHFQTTHHDLWDFDlPSQPL-LYDLP-DGKggTTPVLVQTSKQGMIFMLNRETGEPvakveerpvpagnVKG 523
Cdd:cd10279 261 DADTGRYKWHYQTTPGDTWDYT-ATQPIiLADLEiDGK--PRKVLMHAPKNGFFYVLDRATGKL-------------LSA 324
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 524 ERYSPTQpysvgmpmignqtltesdmWgATPIDLLLCR-IQFKEMRHQgvftppgEDRSLQFPGSLGGMNWGSVSLDPNN 602
Cdd:cd10279 325 EPFVPVN-------------------W-ATGIDLKTGRpIENPEARYT-------KGPKLVFPGPLGAHNWHPMSYNPDT 377
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 603 SLMF--VNDMRLGLANYMV-PRAKVAKDASGIEMGIVPMEGTPFGAMRerflsplgipcqKPPFGTMFAVDLKTGKLVWQ 679
Cdd:cd10279 378 GLVYipAQEIPAVYEDDPGdFGYNPLGWNTGITPDATPPPAAAKRALR------------KATRGRLVAWDPVTQKAAWR 445
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 680 VPvgtvedtgplgirmhMPIPIGmptlGASLATQSGLLfFAGTQDFYLRAFDTANGKEIWKSRLPVGSQSGPMTYVSpkT 759
Cdd:cd10279 446 VE---------------HPGPWN----GGVLATAGNLV-FQGTADGELAAYDARTGEKLWSFDTGSGIVAAPMTYSV--D 503
|
650
....*....|
gi 488996855 760 GKQYIIINAG 769
Cdd:cd10279 504 GEQYVAVLAG 513
|
|
| PQQ_MDH |
cd10278 |
Large subunit of methanol dehydrogenase (moxF); Methanol dehydrogenase is a key enzyme in the ... |
168-769 |
5.41e-63 |
|
Large subunit of methanol dehydrogenase (moxF); Methanol dehydrogenase is a key enzyme in the utilization of C1 compounds as a source of energy and carbon by bacteria. It catalyzes the oxidation of methanol to formaldehyde, transfering two electrons per methanol to cytochrome c(L) as the acceptor. Methanol dehydrogenase belongs to a family of dehydrogenases with pyrroloquinoline quinone (PQQ) as cofactor, which also includes dehydrogenases specific to other alcohols and membrane-bound glucose dehydrogenases. This alignment model for the large subunit contains an 8-bladed beta-propeller; the functional enzyme forms a heterotetramer composed of two large and two small subunits.
Pssm-ID: 199836 [Multi-domain] Cd Length: 553 Bit Score: 221.05 E-value: 5.41e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 168 WAHWGNTTHGDRFAALDQINKQNVNQLQVAWVAHTGDIPQSNGSgaedqntPLQIGDTLYVCTPY-SKVLALDV-DSGKE 245
Cdd:cd10278 1 WVMPGKDYANTRYSPLAQINKDNVKNLKVAWTFSTGVLRGHEGA-------PLVVGDTMYVVTPFpNNVYALDLnDPGKI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 246 KWRYDSK--SSSPNWQRC----RGLGYyADSqaqtaqasgtqpaacsrRLFLPTIDARLIAIDADTGKlcesfgdrgiVD 319
Cdd:cd10278 74 LWKYKPKqdPSAVAVACCdvvnRGLAY-ADG-----------------KIFFNQLDGHLVALDAKTGK----------EV 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 320 LSVGMGEVKAGyyqQTST--PLVAGNVVVVGgrvadnySTGEPPGV---VRAFDVHTGKLAW-AWDPG-----------N 382
Cdd:cd10278 126 WKVKNGDPKVG---ETLTmaPLVVKDKVIVG-------ISGGEFGVrgyVTAYDLKTGKLVWrAYSTGpdkdvligpdfN 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 383 PALT-------GVPP-EGQTYTRGTPNVWSAMSYDAKLNLIYLPTGNA---TPDFFGGertalDDKYSSSIVAVDATTGQ 451
Cdd:cd10278 196 PFNPhdggkdlGLSTwPGDAWKIGGGTNWGWYSYDPKLNLVYYGTGNPgpwNPTQRPG-----DNKWSMTIFARDPDTGE 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 452 VRWHFQTTHHDLWDFDLPSQPLLYDLP-DGKGgtTPVLVQTSKQGMIFMLNRETGEPVakVEERPVPAGNVKGerysptq 530
Cdd:cd10278 271 AKWAYQMTPHDEWDYDGVNEMILVDQTvDGKK--RKLLVHFDRNGFVYTLDRTTGELL--SAEKFDPVNNWKG------- 339
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 531 pysvgmpmignqtltesdmwgatpIDLLLCRIQfKEMRHqgvftPPGEDRSLQ--FPGSLGGMNWGSVSLDPNNSLMFvn 608
Cdd:cd10278 340 ------------------------VDLKTGRPV-KDPEK-----STHMDHNVTdiCPSAMGGKDQQPSSYSPKTGLFY-- 387
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 609 dmrlglanymVPRAKVAKDASGIEMGIVpmEGTPF-GAMRERFLSPLGIpcqkppFGTMFAVDLKTGKLVWQvpvgtved 687
Cdd:cd10278 388 ----------VPTNHLCMDYEPFEVNYT--AGQPYvGATLAMYPGPGGH------MGQFKAWDPVTGKTKWE-------- 441
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 688 tgplgirmhmpIPIGMPTLGASLATQSGLLFFaGTQDFYLRAFDTANGKEIWKSRLPVGSQSGPMTYVSpkTGKQYIIIN 767
Cdd:cd10278 442 -----------IKERFPVWSGTLATAGGLVFY-GTLDGWFKAVDAKTGKLLWKFKLPSGIIGNPITYKH--DGKQYVAVL 507
|
..
gi 488996855 768 AG 769
Cdd:cd10278 508 SG 509
|
|
| BamB_YfgL |
cd10276 |
Beta-barrel assembly machinery (Bam) complex component B and related proteins; BamB (YflG) is ... |
193-512 |
3.35e-10 |
|
Beta-barrel assembly machinery (Bam) complex component B and related proteins; BamB (YflG) is a non-essential component of the beta-barrel assembly machinery (Bam), a multi-subunit complex that inserts proteins with beta-barrel topology into the outer membrane. BamB has been found to interact with BamA, which in turn binds and stabilizes pre-folded beta-barrel proteins; it has been suggested that BamB participates in the stabilization.
Pssm-ID: 199834 [Multi-domain] Cd Length: 358 Bit Score: 62.73 E-value: 3.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 193 QLQVAWVAHTGdipqsNGSGAEDQNTPLQIGDTLYVCTPYSKVLALDVDSGKEKWRYDSKSSspnwQRCRGLGYYADSQA 272
Cdd:cd10276 13 DPEVLWSKSVG-----NGGMAGIDLTPVVAGDMVYAADANGQVSAFNATTGKIIWETSLSGK----GFLGGTPAVGNGKI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 273 QTAQASG------------------------TQPAACSRRLFLPTIDARLIAIDADTGKLCESFGDrgivdlsvgmgEVK 328
Cdd:cd10276 84 FVGTESGylyaldakdgselwrtevsdsqllSPPTYADGKIYVGTGDGRLYYCNAETGKVVWNRTS-----------TAP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 329 AGYYQQTSTPLvagnvvvvggRVADNYSTGEPPGVVRAFDVHTGKLAWAWDPGNP----ALTGVPPEGQTYTRGTPNVWS 404
Cdd:cd10276 153 ELSLRGGAAPV----------GAYDVVFVGDGNGTVVALNTGTGVDIWEFSVSEPrgrtELPRMIDSSVTYVVVGGYLYS 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 405 AMS--YDAKLNL---IYLPTGNATpdffGGERTALDDKYS-------SSIVAVDATTGQVRWHFQTTHHdlwdfDLPSQP 472
Cdd:cd10276 223 TSYqgYLVALDFesgQFLWSRKAS----GGTSTSTDANGRvyvgdgeGSLYCLDASTGDELWSQTVLLG-----RVLSSP 293
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 488996855 473 LLYDLPDgkggttpVLVQTSKQGMIFMLNRETGEPVAKVE 512
Cdd:cd10276 294 AIYVGVY-------IYVTDNAEGYLYCLKDNDGLTVARVE 326
|
|
| PQQ |
COG1520 |
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell ... |
193-521 |
4.01e-09 |
|
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 441129 [Multi-domain] Cd Length: 370 Bit Score: 59.44 E-value: 4.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 193 QLQVAWVAHTGDipqsngsGAEDQNTPLQI---GDTLYVCTPYSKVLALDVDSGKEKWRYDSK---SSSPnwqrcrGLGY 266
Cdd:COG1520 31 KVKQLWSASVGD-------GVGKGYSRLAPavaGDRVYAADADGRVAALDAATGKELWRVDLGeplSGGV------GADG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 267 ------------YADSQAQ-----TAQASG---TQPAACSRRLFLPTIDARLIAIDADTGKLCESFgDRGIVDLSVgmge 326
Cdd:COG1520 98 glvvvgtedgevIALDADDgeelwRARLSSevlAAPAVAGGRVVVRTGDGRVYALDAATGERLWSY-QRPVPALTL---- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 327 vkagyyQQTSTPLVAgnvvvvggrvaDNYS-TGEPPGVVRAFDVHTGKLAW----AwDP-------------GNPALTGv 388
Cdd:COG1520 173 ------RGTSSPVIV-----------GGAVlVGFANGKLVALDLANGQPLWeqrvA-QPrgrtelerlvdvdGTPVVDG- 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 389 ppeGQTYtrgtpnvwsAMSYDAKLNLIYLPTGNA--TPDFFGGERTALDDKY------SSSIVAVDATTGQVRWhfqtth 460
Cdd:COG1520 234 ---GVVY---------AVAYQGRLAALDLRSGRVlwSRDLSSYTGLAVDGNNlyvtddDGRVWALDRRNGAELW------ 295
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488996855 461 hdlwdfdlpSQPLLydlpDGKGGTTPVLVQTS-----KQGMIFMLNRETGEPVAKVEE-------RPVPAGNV 521
Cdd:COG1520 296 ---------KQDAL----LYRGLTAPVVLGDYvvvgdFEGYLHWLSRDDGSLVARLRVdgsgiraAPVVVGDT 355
|
|
| PQQ_2 |
pfam13360 |
PQQ-like domain; This domain contains several repeats of the PQQ repeat. |
223-454 |
4.28e-06 |
|
PQQ-like domain; This domain contains several repeats of the PQQ repeat.
Pssm-ID: 433144 [Multi-domain] Cd Length: 233 Bit Score: 48.55 E-value: 4.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 223 GDTLYVCTPYSKVLALDVDSGKEKWRYDskssspnwqrcrglgyyADSQAQTAqasgtqPAACSRRLFLPTIDARLIAID 302
Cdd:pfam13360 33 GGRLFVATGGGQLVALDAATGKLLWRQT-----------------LSGEVLGA------PLVAGGRVFVVAGDGSLIALD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 303 ADTGKLCesfgdrgivdlsvgmgevkagYYQQTSTPLVAGNVVVVGGRVADNYSTGEPPGVVRAFDVHTGKLAW----AW 378
Cdd:pfam13360 90 AADGRRL---------------------WSYQRSGEPLALRSSGSPAVVGDTVVAGFSSGKLVALDPATGKVRWeaplAA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 379 DPGNPALtgvppEGQTYTRGTPNVWS----AMSYDAKLNLIYLPTGNA--TPDFFGGERTALDDKY------SSSIVAVD 446
Cdd:pfam13360 149 PRGTNEL-----ERLVDITGTPVVAGgrvfASAYQGRLVAFDAATGRRlwTREISGPNGPILDGDLlyvvsdDGELYALD 223
|
....*...
gi 488996855 447 ATTGQVRW 454
Cdd:pfam13360 224 RATGAVVW 231
|
|
| PRK11138 |
PRK11138 |
outer membrane biogenesis protein BamB; Provisional |
180-512 |
2.84e-05 |
|
outer membrane biogenesis protein BamB; Provisional
Pssm-ID: 236857 [Multi-domain] Cd Length: 394 Bit Score: 47.23 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 180 FAALDQINKQNvnQLQVAWVAhtgdipqSNGSGAED---QNTPLQIGDTLYVCTPYSKVLALDVDSGKEKWRYDSkSSSP 256
Cdd:PRK11138 32 MSPLPQVENQF--TPTTVWST-------SVGDGVGDyysRLHPAVAYNKVYAADRAGLVKALDADTGKEIWSVDL-SEKD 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 257 NWQrcrglgyyadSQAQTAQASGTqPAACSRRLFLPTIDARLIAIDADTGKLcesfgdrgIVDLSVGmGEVkagyyqqTS 336
Cdd:PRK11138 102 GWF----------SKNKSALLSGG-VTVAGGKVYIGSEKGQVYALNAEDGEV--------AWQTKVA-GEA-------LS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 337 TPLvagnvvvvggrVADNY---STGEppGVVRAFDVHTGKLAWAWDPGNPALTgvppegqtyTRGTpnvwSAMSY----- 408
Cdd:PRK11138 155 RPV-----------VSDGLvlvHTSN--GMLQALNESDGAVKWTVNLDVPSLT---------LRGE----SAPATafgga 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 409 -----DAKLNL-------------IYLPTGN----------ATPDFFGGERTALddKYSSSIVAVDATTGQVRWH----- 455
Cdd:PRK11138 209 ivggdNGRVSAvlmeqgqliwqqrISQPTGAteidrlvdvdTTPVVVGGVVYAL--AYNGNLVALDLRSGQIVWKreygs 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 456 -----------FQTTHHD------------LWdfdlpSQPLLYdlpdGKGGTTPV-----LVQTSKQGMIFMLNRETGEP 507
Cdd:PRK11138 287 vndfavdggriYLVDQNDrvyaldtrggveLW-----SQSDLL----HRLLTAPVlyngyLVVGDSEGYLHWINREDGRF 357
|
....*
gi 488996855 508 VAKVE 512
Cdd:PRK11138 358 VAQQK 362
|
|
| BamB_YfgL |
cd10276 |
Beta-barrel assembly machinery (Bam) complex component B and related proteins; BamB (YflG) is ... |
662-764 |
4.01e-05 |
|
Beta-barrel assembly machinery (Bam) complex component B and related proteins; BamB (YflG) is a non-essential component of the beta-barrel assembly machinery (Bam), a multi-subunit complex that inserts proteins with beta-barrel topology into the outer membrane. BamB has been found to interact with BamA, which in turn binds and stabilizes pre-folded beta-barrel proteins; it has been suggested that BamB participates in the stabilization.
Pssm-ID: 199834 [Multi-domain] Cd Length: 358 Bit Score: 46.56 E-value: 4.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 662 PFGTMFAVDLKTGKLVWQVPVGtvedtgplgirmhmpipiGMPTLGASLATQSGLLFfAGTQDFYLRAFDTANGKEIWKS 741
Cdd:cd10276 46 ANGQVSAFNATTGKIIWETSLS------------------GKGFLGGTPAVGNGKIF-VGTESGYLYALDAKDGSELWRT 106
|
90 100
....*....|....*....|...
gi 488996855 742 RLPVGSQSGPMTYVSpktGKQYI 764
Cdd:cd10276 107 EVSDSQLLSPPTYAD---GKIYV 126
|
|
| HdeD |
COG3247 |
Acid resistance membrane protein HdeD, DUF308 family [General function prediction only]; |
16-114 |
2.39e-04 |
|
Acid resistance membrane protein HdeD, DUF308 family [General function prediction only];
Pssm-ID: 442478 [Multi-domain] Cd Length: 178 Bit Score: 42.47 E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 16 WLLAGLMLIIGLAVGILGAKLALVGGTLYFALMGVVMVIAAVLIFRNRRGG--ILLYAVAF------IASVIWAIS---- 83
Cdd:COG3247 39 ILFGILLLVSGIVQLVAAFRARGWGGRGWLLLLGILYIVAGILLLFNPLAGalVLTLLIGIwllvsgILRIVAAFRlrke 118
|
90 100 110
....*....|....*....|....*....|....
gi 488996855 84 DAGWnYWPLFSrlfalGVLAFLAA---LVWPFLA 114
Cdd:COG3247 119 VPGW-GWLLLS-----GILSLLLGillLFWPFSG 146
|
|
| PQQ_2 |
pfam13360 |
PQQ-like domain; This domain contains several repeats of the PQQ repeat. |
171-377 |
2.73e-04 |
|
PQQ-like domain; This domain contains several repeats of the PQQ repeat.
Pssm-ID: 433144 [Multi-domain] Cd Length: 233 Bit Score: 43.16 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 171 WGNTTHGDRFAALDQinkqnVNQLqVAWVAHTGDIPQSNGSGAEDQNTPLQIGDTLYVCTPYSKVLALDVDSGKEKWRYD 250
Cdd:pfam13360 27 GGVAVDGGRLFVATG-----GGQL-VALDAATGKLLWRQTLSGEVLGAPLVAGGRVFVVAGDGSLIALDAADGRRLWSYQ 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 251 skssspnwqrcrglgyyaDSQAQTAQASGTQPAACSRRLFLPTIDARLIAIDADTGKL---CESFGDRGIVDLS------ 321
Cdd:pfam13360 101 ------------------RSGEPLALRSSGSPAVVGDTVVAGFSSGKLVALDPATGKVrweAPLAAPRGTNELErlvdit 162
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 322 ----VGMGEVKAGYYQQ----------TSTPLVAGNVVVVGGRVADNYSTGEPPGVVRAFDVHTGKLAWA 377
Cdd:pfam13360 163 gtpvVAGGRVFASAYQGrlvafdaatgRRLWTREISGPNGPILDGDLLYVVSDDGELYALDRATGAVVWK 232
|
|
| PQQ_2 |
pfam13360 |
PQQ-like domain; This domain contains several repeats of the PQQ repeat. |
362-525 |
3.97e-04 |
|
PQQ-like domain; This domain contains several repeats of the PQQ repeat.
Pssm-ID: 433144 [Multi-domain] Cd Length: 233 Bit Score: 42.78 E-value: 3.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 362 GVVRAFDVHTGKLAWAWDPGNPALTGVP-PEGQTYTRGTPNVwsAMSYDAKLNLIY----LPTGNATPDFFGGERT---A 433
Cdd:pfam13360 3 GVVTALDAATGAELWRVDLETGLGGGVAvDGGRLFVATGGGQ--LVALDAATGKLLwrqtLSGEVLGAPLVAGGRVfvvA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 434 LDDkyssSIVAVDATTGQVRWHFQTTHHDLWdFDLPSQPLLYdlpdgkGGTtpVLVQTSKqGMIFMLNRETGEPVAkveE 513
Cdd:pfam13360 81 GDG----SLIALDAADGRRLWSYQRSGEPLA-LRSSGSPAVV------GDT--VVAGFSS-GKLVALDPATGKVRW---E 143
|
170
....*....|....
gi 488996855 514 RPVPA--GNVKGER 525
Cdd:pfam13360 144 APLAAprGTNELER 157
|
|
| Cyt_b561_CYB561D2_like |
cd08761 |
Eukaryotic cytochrome b(561), including the CYB561D2 gene product; Cytochrome b(561), as found ... |
24-109 |
4.39e-04 |
|
Eukaryotic cytochrome b(561), including the CYB561D2 gene product; Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Pssm-ID: 176491 Cd Length: 183 Bit Score: 41.89 E-value: 4.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 24 IIGLAVGILGAKLALVGGTLYFALMGVVMVIAAVLIFR-NRRGGILLYAVAfIASVIWAISDAGWNYWPLFSRLFALGVL 102
Cdd:cd08761 97 ILGLVTVILIVLQALGGLALLYPPGLRRGESKAKKLKKyHRLSGYVAYLLG-LATLVLGLETRWFSKNVTHVALWYLALA 175
|
....*..
gi 488996855 103 AFLAALV 109
Cdd:cd08761 176 VALALAG 182
|
|
| PQQ |
pfam01011 |
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller ... |
442-466 |
4.42e-04 |
|
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller has been found in several enzymes which utilize pyrrolo-quinoline quinone as a prosthetic group.
Pssm-ID: 395799 [Multi-domain] Cd Length: 36 Bit Score: 38.33 E-value: 4.42e-04
|
| assembly_YfgL |
TIGR03300 |
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a ... |
223-307 |
5.11e-04 |
|
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274511 [Multi-domain] Cd Length: 377 Bit Score: 43.00 E-value: 5.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 223 GDTLYVCTPYSKVLALDVDSGKEKWRydskssspnwqrcrglgyyadsqaqtAQASG---TQPAACSRRLFLPTIDARLI 299
Cdd:TIGR03300 105 GGLVFVGTEKGEVIALDAEDGKELWR--------------------------AKLSSevlSPPLVANGLVVVRTNDGRLT 158
|
....*...
gi 488996855 300 AIDADTGK 307
Cdd:TIGR03300 159 ALDAATGE 166
|
|
| assembly_YfgL |
TIGR03300 |
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a ... |
662-744 |
1.08e-03 |
|
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274511 [Multi-domain] Cd Length: 377 Bit Score: 42.23 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 662 PFGTMFAVDLKTGKLVWQVPVGTvedtgPLGirmhmpipiGMPTLGASLAtqsgllfFAGTQDFYLRAFDTANGKEIWKS 741
Cdd:TIGR03300 73 ADGTVAALDAETGKRLWRVDLDE-----RLS---------GGVGADGGLV-------FVGTEKGEVIALDAEDGKELWRA 131
|
...
gi 488996855 742 RLP 744
Cdd:TIGR03300 132 KLS 134
|
|
| 7TMR-DISM_7TM |
pfam07695 |
7TM diverse intracellular signalling; This entry represents the transmembrane region of the ... |
5-108 |
1.56e-03 |
|
7TM diverse intracellular signalling; This entry represents the transmembrane region of the 7TM-DISM (7TM Receptors with Diverse Intracellular Signalling Modules).
Pssm-ID: 429600 [Multi-domain] Cd Length: 207 Bit Score: 40.72 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 5 NAPRGFPRILQWL--LAGLMLIIGLAVGILGAKLALVGGTLYFALMGVVMVIAAVLIFRNRRGGILLYAVAF----IASV 78
Cdd:pfam07695 90 ELKKYLPRLLRLLlgLALLLALLLLLLPLFPYTLSLPLAQLLALLFILFLLLLGIIAWRKGYKPARYFLLAWllllIGAL 169
|
90 100 110
....*....|....*....|....*....|.
gi 488996855 79 IWAISDAGWNYWPLFSR-LFALGVLAFLAAL 108
Cdd:pfam07695 170 IDILSLLGLLPSNFFTNyLLQIGSALEVLLL 200
|
|
| CodB |
COG1457 |
Purine-cytosine permease or related protein [Nucleotide transport and metabolism]; |
10-118 |
1.70e-03 |
|
Purine-cytosine permease or related protein [Nucleotide transport and metabolism];
Pssm-ID: 441066 [Multi-domain] Cd Length: 448 Bit Score: 41.78 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 10 FPRILQWLLAGLMLIIGLAVGILGAkLALVGGTLyfALMGVVMV-IAAVLI---FRNRRGGILLYAVAFIASVIwaisdA 85
Cdd:COG1457 316 FPRLGRVVATLVVGVIGTLLALLGF-LDAFENFL--LLLGVVLPpWGGIMLadyFLVRRGRYDPDALFDRRGRY-----G 387
|
90 100 110
....*....|....*....|....*....|...
gi 488996855 86 GWNYWPLFSrlFALGVLAFLAALVWPFLASPPA 118
Cdd:COG1457 388 GVNWVGLIA--WLLGSVVGILFVNTPGLFGPAL 418
|
|
| CynX |
COG2807 |
Cyanate permease [Inorganic ion transport and metabolism]; |
11-123 |
2.20e-03 |
|
Cyanate permease [Inorganic ion transport and metabolism];
Pssm-ID: 442057 [Multi-domain] Cd Length: 399 Bit Score: 41.01 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 11 PRILQWLLAGLMLIIGLAVGILGAKLALVGGTLYF-----ALMGVVMVIAAVLI-------FRNRRGGIL-LYAV----- 72
Cdd:COG2807 74 PRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALllagtALIGAGIAVGNVLLpglikrwFPDRVGLMTgLYTAamglg 153
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 488996855 73 AFIASVI--WAISDAGWNYWplfsrLFALGVLAFLAALVW-PFLASPPAKKGPA 123
Cdd:COG2807 154 AALAAGLtvPLAAALGWRGA-----LAVWALLALLALLLWlPLLRRRPAAAAAA 202
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
12-110 |
2.34e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.52 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 12 RILQWLLAGLMLIIGLAVGILGAKLALVGGTLYFALMGVVMVIAAVLIFRNRRG--------GILLYAVAFIASVIWAIS 83
Cdd:COG5373 273 RWLNLLGFAGTFGWGLLWGVLLYRPELFLSTELFLIAFFLLFLAIALLFALRHPgplrgpvdGTLLFGTPLVAFALQLAL 352
|
90 100
....*....|....*....|....*..
gi 488996855 84 DAGWNYWPLFSRLFALGVLAFLAALVW 110
Cdd:COG5373 353 VADSGYGLALSALALALLYLALALLLR 379
|
|
| DUF3784 |
pfam12650 |
Domain of unknown function (DUF3784); This family of proteins is functionally uncharacterized. ... |
16-82 |
2.66e-03 |
|
Domain of unknown function (DUF3784); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 96 and 110 amino acids in length.
Pssm-ID: 463655 Cd Length: 94 Bit Score: 37.58 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 16 WLLAGLMLIIGLAVGILGAKLALVGG-TL-------------------YFALMGVVMVIAAVLIFRNRRGGILLYAVAFI 75
Cdd:pfam12650 1 LILGIIFLILGILFLKGKGANLIAGYnTMskeekekydekklcrfmgiLLLLIGILFLLLGLLSAFGSEAFLIIAIIAII 80
|
....*..
gi 488996855 76 ASVIWAI 82
Cdd:pfam12650 81 IIVIYII 87
|
|
| TgpA_N |
pfam11992 |
TgpA N-terminal domain; This domain can be found at the N terminus of TgpA from Pseudomonas ... |
6-108 |
3.65e-03 |
|
TgpA N-terminal domain; This domain can be found at the N terminus of TgpA from Pseudomonas aeruginosa. TgpA is a transglutaminase that plays a critical role in the viability of Pseudomonas aeruginosa. This domain is composed of 5 transmembrane helices.
Pssm-ID: 463423 Cd Length: 336 Bit Score: 40.49 E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 6 APRGFPRILQWLLAGLmLIIGLAVGILGAKLALVGGTLYF---ALMGVVMVIAAVLIFRNRRGGILLYAVAFIASVIWAI 82
Cdd:pfam11992 41 RLPRWRLPPALLLAGL-LVLALLLTLFLAGTALLGLSLGLlaaVALLLLALLLKLLEVRLRRDALAGLLLLLFLLVPAAL 119
|
90 100
....*....|....*....|....*.
gi 488996855 83 SDAGWNYWplfsrLFALGVLAFLAAL 108
Cdd:pfam11992 120 LSQSLGLL-----LFLLLALAFLLLL 140
|
|
| PQQ |
pfam01011 |
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller ... |
224-250 |
4.25e-03 |
|
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller has been found in several enzymes which utilize pyrrolo-quinoline quinone as a prosthetic group.
Pssm-ID: 395799 [Multi-domain] Cd Length: 36 Bit Score: 35.63 E-value: 4.25e-03
10 20
....*....|....*....|....*..
gi 488996855 224 DTLYVCTPYSKVLALDVDSGKEKWRYD 250
Cdd:pfam01011 1 GTVYLGSDDGYLYALDAETGKVLWSFK 27
|
|
| assembly_YfgL |
TIGR03300 |
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a ... |
207-512 |
4.45e-03 |
|
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274511 [Multi-domain] Cd Length: 377 Bit Score: 40.30 E-value: 4.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 207 QSNGSGAEDQNTPLQI---GDTLYVCTPYSKVLALDVDSGKEKWRYDskssspnwqrcrglgyyadsqAQTAQASGtqPA 283
Cdd:TIGR03300 46 ASVGDGVGHYYLRLQPavaGGKVYAADADGTVAALDAETGKRLWRVD---------------------LDERLSGG--VG 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 284 ACSRRLFLPTIDARLIAIDADTGKLcesfgdrgIVDLSVGmGEVkagyyqqTSTPLVAGNVVVVggrvadnySTGEppGV 363
Cdd:TIGR03300 103 ADGGLVFVGTEKGEVIALDAEDGKE--------LWRAKLS-SEV-------LSPPLVANGLVVV--------RTND--GR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 364 VRAFDVHTGKLAWAWDPGNPALT----GVPpegqTYTRGTPNVWSAMSYDAKLNL----------IYLPTG--------- 420
Cdd:TIGR03300 157 LTALDAATGERLWTYSRVTPPLTlrgsASP----VIADGGVLVGFAGGKLVALDLqtgqplweqrVALPKGrtelerlvd 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 421 -NATPDFFGGERTALddKYSSSIVAVDATTGQVRWH----------------FQTTHHD-LWDFDLPSQPLLYDLPDGKG 482
Cdd:TIGR03300 233 vDGDPVVDGGQVYAV--SYQGRVAALDLRSGRVLWKrdassyqgpavddnrlYVTDADGvVVALDRRSGSELWKNDELKY 310
|
330 340 350
....*....|....*....|....*....|....*..
gi 488996855 483 G--TTPVLVQTS-----KQGMIFMLNRETGEPVAKVE 512
Cdd:TIGR03300 311 RqlTAPAVLGGYlvvgdFEGYLHWLDRDDGSFVARLK 347
|
|
| PQQ |
COG1520 |
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell ... |
664-744 |
4.45e-03 |
|
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 441129 [Multi-domain] Cd Length: 370 Bit Score: 40.18 E-value: 4.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488996855 664 GTMFAVDLKTGKLVWQVPVGTVedtgplgirmhmpipigmptLGASLATQSGLLFFaGTQDFYLRAFDTANGKEIWKSRL 743
Cdd:COG1520 67 GRVAALDAATGKELWRVDLGEP--------------------LSGGVGADGGLVVV-GTEDGEVIALDADDGEELWRARL 125
|
.
gi 488996855 744 P 744
Cdd:COG1520 126 S 126
|
|
| PQQ |
pfam01011 |
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller ... |
719-751 |
6.30e-03 |
|
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller has been found in several enzymes which utilize pyrrolo-quinoline quinone as a prosthetic group.
Pssm-ID: 395799 [Multi-domain] Cd Length: 36 Bit Score: 34.86 E-value: 6.30e-03
10 20 30
....*....|....*....|....*....|...
gi 488996855 719 FAGTQDFYLRAFDTANGKEIWKSRLPVGSQSGP 751
Cdd:pfam01011 4 YLGSDDGYLYALDAETGKVLWSFKTGGAVLSSP 36
|
|
| |
