MULTISPECIES: macrodomain Ter protein MatP [Klebsiella]
macrodomain Ter protein( domain architecture ID 10012251)
macrodomain Ter protein is required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle, and prevents early segregation of duplicated Ter macrodomains during cell division
List of domain hits
Name | Accession | Description | Interval | E-value | |||
PRK05097 | PRK05097 | macrodomain Ter protein MatP; |
1-150 | 6.91e-103 | |||
macrodomain Ter protein MatP; : Pssm-ID: 235344 [Multi-domain] Cd Length: 150 Bit Score: 290.71 E-value: 6.91e-103
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Name | Accession | Description | Interval | E-value | |||
PRK05097 | PRK05097 | macrodomain Ter protein MatP; |
1-150 | 6.91e-103 | |||
macrodomain Ter protein MatP; Pssm-ID: 235344 [Multi-domain] Cd Length: 150 Bit Score: 290.71 E-value: 6.91e-103
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MatP | COG3120 | Macrodomain Ter protein organizer, MatP/YcbG family [Replication, recombination and repair]; |
1-149 | 9.94e-100 | |||
Macrodomain Ter protein organizer, MatP/YcbG family [Replication, recombination and repair]; Pssm-ID: 442354 Cd Length: 149 Bit Score: 282.65 E-value: 9.94e-100
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MatP | pfam06303 | MatP N-terminal domain; This family, many of whose members are YcbG, organizes the macrodomain ... |
2-85 | 3.18e-50 | |||
MatP N-terminal domain; This family, many of whose members are YcbG, organizes the macrodomain Ter of the chromosome of bacteria such as E coli. In these bacteria, insulated macrodomains influence the segregation of sister chromatids and the mobility of chromosomal DNA. organization of the Terminus region (Ter) into a macrodomain relies on the presence of a 13 bp motif called matS repeated 23 times in the 800-kb-long domain. MatS sites are the main targets in the E. coli chromosome of YcbG or MatP (macrodomain Ter protein). MatP accumulates in the cell as a discrete focus that co-localizes with the Ter macrodomain. The effects of MatP inactivation reveal its role as the main organizer of the Ter macrodomain: in the absence of MatP, DNA is less compacted, the mobility of markers is increased, and segregation of the Ter macrodomain occurs early in the cell cycle. A specific organizational system is required in the Terminus region for bacterial chromosome management during the cell cycle. This entry represents the N-terminal domain of MatP. Pssm-ID: 428878 Cd Length: 84 Bit Score: 155.31 E-value: 3.18e-50
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Name | Accession | Description | Interval | E-value | |||
PRK05097 | PRK05097 | macrodomain Ter protein MatP; |
1-150 | 6.91e-103 | |||
macrodomain Ter protein MatP; Pssm-ID: 235344 [Multi-domain] Cd Length: 150 Bit Score: 290.71 E-value: 6.91e-103
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MatP | COG3120 | Macrodomain Ter protein organizer, MatP/YcbG family [Replication, recombination and repair]; |
1-149 | 9.94e-100 | |||
Macrodomain Ter protein organizer, MatP/YcbG family [Replication, recombination and repair]; Pssm-ID: 442354 Cd Length: 149 Bit Score: 282.65 E-value: 9.94e-100
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MatP | pfam06303 | MatP N-terminal domain; This family, many of whose members are YcbG, organizes the macrodomain ... |
2-85 | 3.18e-50 | |||
MatP N-terminal domain; This family, many of whose members are YcbG, organizes the macrodomain Ter of the chromosome of bacteria such as E coli. In these bacteria, insulated macrodomains influence the segregation of sister chromatids and the mobility of chromosomal DNA. organization of the Terminus region (Ter) into a macrodomain relies on the presence of a 13 bp motif called matS repeated 23 times in the 800-kb-long domain. MatS sites are the main targets in the E. coli chromosome of YcbG or MatP (macrodomain Ter protein). MatP accumulates in the cell as a discrete focus that co-localizes with the Ter macrodomain. The effects of MatP inactivation reveal its role as the main organizer of the Ter macrodomain: in the absence of MatP, DNA is less compacted, the mobility of markers is increased, and segregation of the Ter macrodomain occurs early in the cell cycle. A specific organizational system is required in the Terminus region for bacterial chromosome management during the cell cycle. This entry represents the N-terminal domain of MatP. Pssm-ID: 428878 Cd Length: 84 Bit Score: 155.31 E-value: 3.18e-50
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MatP_C | pfam17414 | MatP C-terminal ribbon-helix-helix domain; This family, many of whose members are YcbG, ... |
88-147 | 1.62e-26 | |||
MatP C-terminal ribbon-helix-helix domain; This family, many of whose members are YcbG, organizes the macrodomain Ter of the chromosome of bacteria such as E coli. In these bacteria, insulated macrodomains influence the segregation of sister chromatids and the mobility of chromosomal DNA. organization of the Terminus region (Ter) into a macrodomain relies on the presence of a 13 bp motif called matS repeated 23 times in the 800-kb-long domain. MatS sites are the main targets in the E. coli chromosome of YcbG or MatP (macrodomain Ter protein). MatP accumulates in the cell as a discrete focus that co-localizes with the Ter macrodomain. The effects of MatP inactivation reveal its role as the main organizer of the Ter macrodomain: in the absence of MatP, DNA is less compacted, the mobility of markers is increased, and segregation of the Ter macrodomain occurs early in the cell cycle. A specific organizational system is required in the Terminus region for bacterial chromosome management during the cell cycle. This entry represents the C-terminal ribbon-helix-helix domain. Pssm-ID: 435905 Cd Length: 60 Bit Score: 94.43 E-value: 1.62e-26
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Blast search parameters | ||||
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