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Conserved domains on  [gi|488976013|ref|WP_002886900|]
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MULTISPECIES: lactonase family protein [Klebsiella]

Protein Classification

lactonase family protein( domain architecture ID 11457674)

lactonase family protein similar to 6-phosphogluconolactonase which\ncatalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconic acid in the oxidative phase of the pentose phosphate pathway

CATH:  2.130.10.10
Gene Ontology:  GO:0052689
SCOP:  4002745|4000933

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Pgl COG2706
6-phosphogluconolactonase, cycloisomerase 2 family [Carbohydrate transport and metabolism];
24-380 1.45e-144

6-phosphogluconolactonase, cycloisomerase 2 family [Carbohydrate transport and metabolism];


:

Pssm-ID: 442025 [Multi-domain]  Cd Length: 352  Bit Score: 413.92  E-value: 1.45e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  24 THYAWVGTYN-PNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASEVEKGVVQAWRIE-KNGELTALS 101
Cdd:COG2706    7 STFVYVGTYTsGESEGIYVFRLDTATGELTLLGLVAALGNPSFLALSPDGRFLYAVNEVDDGGVSAFRIDpADGTLTLLN 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 102 QVASGGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGpagaerpaaaveGSFAISDHNGPHAHM 181
Cdd:COG2706   87 TVSSGGASPCHLSVDPDGRFLFVANYGGGSVSVFPIDADGSLGEPVQVIQHEG------------SGPNPERQEGPHAHS 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 182 IAADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPndPPFIAASsPGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQS 261
Cdd:COG2706  155 VVFDPDGRFLYVPDLGTDRIYVYRLDPATGKLPE--PPEVSLP-PGSGPRHLAFHPNGRFAYVINELDSTVSVYAYDAAT 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 262 GLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTVLAD-GSLSHQEDIWTRGDYPRTLTLDNQGQW 340
Cdd:COG2706  232 GTLTLIQTVSTLPEDFTGENWAADIHISPDGRFLYVSNRGHNSIAVFAIDADgGKLTLVGHVPTGGKWPRDFAIDPDGRF 311

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 488976013 341 LYVMNQRSDNITRFSVAPKDGKLTFASDYTPVGSPSQMVI 380
Cdd:COG2706  312 LLVANQKSDNITVFRIDADTGKLTPTGRSVPVPSPVCVAF 351
 
Name Accession Description Interval E-value
Pgl COG2706
6-phosphogluconolactonase, cycloisomerase 2 family [Carbohydrate transport and metabolism];
24-380 1.45e-144

6-phosphogluconolactonase, cycloisomerase 2 family [Carbohydrate transport and metabolism];


Pssm-ID: 442025 [Multi-domain]  Cd Length: 352  Bit Score: 413.92  E-value: 1.45e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  24 THYAWVGTYN-PNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASEVEKGVVQAWRIE-KNGELTALS 101
Cdd:COG2706    7 STFVYVGTYTsGESEGIYVFRLDTATGELTLLGLVAALGNPSFLALSPDGRFLYAVNEVDDGGVSAFRIDpADGTLTLLN 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 102 QVASGGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGpagaerpaaaveGSFAISDHNGPHAHM 181
Cdd:COG2706   87 TVSSGGASPCHLSVDPDGRFLFVANYGGGSVSVFPIDADGSLGEPVQVIQHEG------------SGPNPERQEGPHAHS 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 182 IAADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPndPPFIAASsPGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQS 261
Cdd:COG2706  155 VVFDPDGRFLYVPDLGTDRIYVYRLDPATGKLPE--PPEVSLP-PGSGPRHLAFHPNGRFAYVINELDSTVSVYAYDAAT 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 262 GLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTVLAD-GSLSHQEDIWTRGDYPRTLTLDNQGQW 340
Cdd:COG2706  232 GTLTLIQTVSTLPEDFTGENWAADIHISPDGRFLYVSNRGHNSIAVFAIDADgGKLTLVGHVPTGGKWPRDFAIDPDGRF 311

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 488976013 341 LYVMNQRSDNITRFSVAPKDGKLTFASDYTPVGSPSQMVI 380
Cdd:COG2706  312 LLVANQKSDNITVFRIDADTGKLTPTGRSVPVPSPVCVAF 351
Lactonase pfam10282
Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases ...
 27-376 3.24e-120

Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.


Pssm-ID: 431196 [Multi-domain]  Cd Length: 340  Bit Score: 351.52  E-value: 3.24e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013   27 AWVGTY-NPNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASEV-EKGVVQAWRIEK-NGELTALSQV 103
Cdd:pfam10282   2 LYVGTYtKGDSKGIYVLTLDTETGALTLLGLVAEVGNPSYLALSPDGRTLYAVNEEgDQGGVAAFRIDPdSGALTLLNQV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  104 ASGGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGPAGAErpaaavegsfaiSDHNGPHAHMIA 183
Cdd:pfam10282  82 PTGGASPCHLSVDPDGRFLFVANYHGGSVSVFPLDADGSLGELSQVVQHEGSGPPP------------ERQESPHPHSVD 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  184 ADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPndPPFIAASsPGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQSGL 263
Cdd:pfam10282 150 LTPDGKFLVVPDLGTDRVRVYKLDAGGGKLTP--PASVQTP-PGSGPRHLAFHPNGKYAYVVNELSSTVTVFEYDPATGT 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  264 LREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTVL-ADGSLSHQEDIWTRGDYPRTLTLDNQGQWLY 342
Cdd:pfam10282 227 FEELQTVSTLPEGFTGTNGAAAIRVSPDGKFLYVSNRGHDSIAVFAVDeAGGTLTLVERVSTEGDFPRDFNIDPDGKFLV 306

                         330       340       350
                  ....*....|....*....|....*....|....
gi 488976013  343 VMNQRSDNITRFSVAPKDGKLTFASDYTPVGSPS 376
Cdd:pfam10282 307 VANQDSDNVTVFRRDPETGKLTLLGKDIEVPEPV 340
PRK11028 PRK11028
6-phosphogluconolactonase; Provisional
 57-373 1.06e-38

6-phosphogluconolactonase; Provisional


Pssm-ID: 182912 [Multi-domain]  Cd Length: 330  Bit Score: 141.25  E-value: 1.06e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  57 VSSLPNVAQ-LTVSRDGKTLYAASEVEKGVVqAWRIEKNGELTALSQVASGGAgPVYLSLTPDGKHLLVANYVSGSIAVL 135
Cdd:PRK11028  30 VVDVPGQVQpMVISPDKRHLYVGVRPEFRVL-SYRIADDGALTFAAESPLPGS-PTHISTDHQGRFLFSASYNANCVSVS 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 136 PVQEDGSLAEAVDrhqdegpagaerpaaAVEGSFaisdhnGPHAHMIaaDPSGKYVYSTDLGLDRIYQYRLDSAsGKLTP 215
Cdd:PRK11028 108 PLDKDGIPVAPIQ---------------IIEGLE------GCHSANI--DPDNRTLWVPCLKEDRIRLFTLSDD-GHLVA 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 216 NDPPFIAASSpGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQSGLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQL 295
Cdd:PRK11028 164 QEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHL 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 296 YVANRLHNSIAHFTVLADGS----LSHQEdiwTRgDYPRTLTLDNQGQWLYVMNQRSDNITRFSVAPKDGKLTFASDYtP 371
Cdd:PRK11028 243 YACDRTASLISVFSVSEDGSvlsfEGHQP---TE-TQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGRY-A 317


                 ..
gi 488976013 372 VG 373
Cdd:PRK11028 318 VG 319
PQQ_ABC_repeats TIGR03866
PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family ...
 66-298 1.37e-04

PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.


Pssm-ID: 274824 [Multi-domain]  Cd Length: 310  Bit Score: 43.49  E-value: 1.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013   66 LTVSRDGKTLY-AASEVEKgvVQAWRIEKNGELTALSQvasgGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLA 144
Cdd:TIGR03866  46 ITFSKDGKLLYvCASDSDT--IQVIDPATGEVLHTLPS----GPDPEQFALHPNGKILYIANEDDALVTVIDIETRKVLA 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  145 EAvdrhqdegPAGAErPaaavEGsfaisdhngphahmIAADPSGKYVYSTDLGLDRIYQyrLDSASGKLTPNDPPfiaas 224
Cdd:TIGR03866 120 QI--------DVGVE-P----EG--------------MAVSPDGKIVVNTSETTNMAHW--IDTATYEIVDNTLV----- 165

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488976013  225 spGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQSGLlreGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVA 298
Cdd:TIGR03866 166 --DARPRFAEFTADGKELWVSSEIGGTVTVIDVATRKVI---KKITFAIPGVHPEKVQPVGIKLTKDGKTAFVA 234
NHL_like_6 cd14962
Uncharacterized NHL-repeat domain in bacterial proteins; The NHL (NCL-1, HT2A and LIN-41) ...
 156-362 3.69e-03

Uncharacterized NHL-repeat domain in bacterial proteins; The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.


Pssm-ID: 271332 [Multi-domain]  Cd Length: 271  Bit Score: 38.72  E-value: 3.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 156 AGAERPAAAVegsfaisdhNGPHAhmIAADPSGKyVYSTDLGLDRIYQYrlDSASGKLTPNDPpfiaasspgAGPRHFVf 235
Cdd:cd14962    2 TGEERPKEAL---------TRPYG--VAADGRGR-IYVADTGRGAVFVF--DLPNGKVFVIGN---------AGPNRFV- 57

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 236 TPQG------DGLWLINEEASTLtfYHLDkqsgllREGKTVSALPEGyKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFT 309
Cdd:cd14962   58 SPIGvaidanGNLYVSDAELGKV--FVFD------RDGKFLRAIGAG-ALFKRPTGIAVDPAGKRLYVVDTLAHKVKVFD 128

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488976013 310 vlADGslSHQEDIWTRGD------YPRTLTLDNQGQwLYV---MNQRsdnITRFSvapKDGK 362
Cdd:cd14962  129 --LDG--RLLFDIGKRGSgpgefnLPTDLAVDRDGN-LYVtdtMNFR---VQIFD---ADGK 179
 
Name Accession Description Interval E-value
Pgl COG2706
6-phosphogluconolactonase, cycloisomerase 2 family [Carbohydrate transport and metabolism];
24-380 1.45e-144

6-phosphogluconolactonase, cycloisomerase 2 family [Carbohydrate transport and metabolism];


Pssm-ID: 442025 [Multi-domain]  Cd Length: 352  Bit Score: 413.92  E-value: 1.45e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  24 THYAWVGTYN-PNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASEVEKGVVQAWRIE-KNGELTALS 101
Cdd:COG2706    7 STFVYVGTYTsGESEGIYVFRLDTATGELTLLGLVAALGNPSFLALSPDGRFLYAVNEVDDGGVSAFRIDpADGTLTLLN 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 102 QVASGGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGpagaerpaaaveGSFAISDHNGPHAHM 181
Cdd:COG2706   87 TVSSGGASPCHLSVDPDGRFLFVANYGGGSVSVFPIDADGSLGEPVQVIQHEG------------SGPNPERQEGPHAHS 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 182 IAADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPndPPFIAASsPGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQS 261
Cdd:COG2706  155 VVFDPDGRFLYVPDLGTDRIYVYRLDPATGKLPE--PPEVSLP-PGSGPRHLAFHPNGRFAYVINELDSTVSVYAYDAAT 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 262 GLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTVLAD-GSLSHQEDIWTRGDYPRTLTLDNQGQW 340
Cdd:COG2706  232 GTLTLIQTVSTLPEDFTGENWAADIHISPDGRFLYVSNRGHNSIAVFAIDADgGKLTLVGHVPTGGKWPRDFAIDPDGRF 311

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 488976013 341 LYVMNQRSDNITRFSVAPKDGKLTFASDYTPVGSPSQMVI 380
Cdd:COG2706  312 LLVANQKSDNITVFRIDADTGKLTPTGRSVPVPSPVCVAF 351
Lactonase pfam10282
Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases ...
 27-376 3.24e-120

Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.


Pssm-ID: 431196 [Multi-domain]  Cd Length: 340  Bit Score: 351.52  E-value: 3.24e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013   27 AWVGTY-NPNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASEV-EKGVVQAWRIEK-NGELTALSQV 103
Cdd:pfam10282   2 LYVGTYtKGDSKGIYVLTLDTETGALTLLGLVAEVGNPSYLALSPDGRTLYAVNEEgDQGGVAAFRIDPdSGALTLLNQV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  104 ASGGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAVDRHQDEGPAGAErpaaavegsfaiSDHNGPHAHMIA 183
Cdd:pfam10282  82 PTGGASPCHLSVDPDGRFLFVANYHGGSVSVFPLDADGSLGELSQVVQHEGSGPPP------------ERQESPHPHSVD 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  184 ADPSGKYVYSTDLGLDRIYQYRLDSASGKLTPndPPFIAASsPGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQSGL 263
Cdd:pfam10282 150 LTPDGKFLVVPDLGTDRVRVYKLDAGGGKLTP--PASVQTP-PGSGPRHLAFHPNGKYAYVVNELSSTVTVFEYDPATGT 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  264 LREGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTVL-ADGSLSHQEDIWTRGDYPRTLTLDNQGQWLY 342
Cdd:pfam10282 227 FEELQTVSTLPEGFTGTNGAAAIRVSPDGKFLYVSNRGHDSIAVFAVDeAGGTLTLVERVSTEGDFPRDFNIDPDGKFLV 306

                         330       340       350
                  ....*....|....*....|....*....|....
gi 488976013  343 VMNQRSDNITRFSVAPKDGKLTFASDYTPVGSPS 376
Cdd:pfam10282 307 VANQDSDNVTVFRRDPETGKLTLLGKDIEVPEPV 340
PRK11028 PRK11028
6-phosphogluconolactonase; Provisional
 57-373 1.06e-38

6-phosphogluconolactonase; Provisional


Pssm-ID: 182912 [Multi-domain]  Cd Length: 330  Bit Score: 141.25  E-value: 1.06e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  57 VSSLPNVAQ-LTVSRDGKTLYAASEVEKGVVqAWRIEKNGELTALSQVASGGAgPVYLSLTPDGKHLLVANYVSGSIAVL 135
Cdd:PRK11028  30 VVDVPGQVQpMVISPDKRHLYVGVRPEFRVL-SYRIADDGALTFAAESPLPGS-PTHISTDHQGRFLFSASYNANCVSVS 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 136 PVQEDGSLAEAVDrhqdegpagaerpaaAVEGSFaisdhnGPHAHMIaaDPSGKYVYSTDLGLDRIYQYRLDSAsGKLTP 215
Cdd:PRK11028 108 PLDKDGIPVAPIQ---------------IIEGLE------GCHSANI--DPDNRTLWVPCLKEDRIRLFTLSDD-GHLVA 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 216 NDPPFIAASSpGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQSGLLREGKTVSALPEGYKGTSFAAGLVLSNDGKQL 295
Cdd:PRK11028 164 QEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHL 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 296 YVANRLHNSIAHFTVLADGS----LSHQEdiwTRgDYPRTLTLDNQGQWLYVMNQRSDNITRFSVAPKDGKLTFASDYtP 371
Cdd:PRK11028 243 YACDRTASLISVFSVSEDGSvlsfEGHQP---TE-TQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGRY-A 317


                 ..
gi 488976013 372 VG 373
Cdd:PRK11028 318 VG 319
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
141-355 7.85e-14

DNA-binding beta-propeller fold protein YncE [General function prediction only];


Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 70.49  E-value: 7.85e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 141 GSLAEAVDRHQDEGPAGAERPAAAVEGSFAISDHNGPHAHMIAADPSGKYVYSTDLGLDRIYqyRLDSASGKLtpndppf 220
Cdd:COG3391   32 GGGPLLAAASGGVVGAAVGGGGVALLAGLGLGAAAVADADGADAGADGRRLYVANSGSGRVS--VIDLATGKV------- 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 221 IAASSPGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKqsgllreGKTVSALPEGykgtSFAAGLVLSNDGKQLYVANR 300
Cdd:COG3391  103 VATIPVGGGPRGLAVDPDGGRLYVADSGNGRVSVIDTAT-------GKVVATIPVG----AGPHGIAVDPDGKRLYVANS 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 488976013 301 LHNSIAHFTVLADGSLSHQEDIWTRGDYPRTLTLDNQGQWLYVMNQRSDNITRFS 355
Cdd:COG3391  172 GSNTVSVIVSVIDTATGKVVATIPVGGGPVGVAVSPDGRRLYVANRGSNTSNGGS 226
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
41-304 1.59e-11

DNA-binding beta-propeller fold protein YncE [General function prediction only];


Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 63.56  E-value: 1.59e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  41 RFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASEVEKGVVQAWRIEKNGELTALSQVASGGAGPVYLSLTPDGK 120
Cdd:COG3391    1 ALVASSLLVAVLLAVLALAALAVAVAALGLGGGGPLLAAASGGVVGAAVGGGGVALLAGLGLGAAAVADADGADAGADGR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 121 HLLVANYVSGSIAVLPVQedgslaeavdrhqdegpagaerpAAAVEGSFAIsdhnGPHAHMIAADPSGKYVYSTDLGLDR 200
Cdd:COG3391   81 RLYVANSGSGRVSVIDLA-----------------------TGKVVATIPV----GGGPRGLAVDPDGGRLYVADSGNGR 133

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 201 IyqYRLDSASGKLtpndppfIAASSPGAGPRHFVFTPQGDGLWLINEEASTLT--FYHLDkqsglLREGKTVSALPEGyk 278
Cdd:COG3391  134 V--SVIDTATGKV-------VATIPVGAGPHGIAVDPDGKRLYVANSGSNTVSviVSVID-----TATGKVVATIPVG-- 197

                        250       260
                 ....*....|....*....|....*.
gi 488976013 279 gtSFAAGLVLSNDGKQLYVANRLHNS 304
Cdd:COG3391  198 --GGPVGVAVSPDGRRLYVANRGSNT 221
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
26-251 3.91e-10

DNA-binding beta-propeller fold protein YncE [General function prediction only];


Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 59.71  E-value: 3.91e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  26 YAWVGTYNPNGEGLYRFTVDAKTGALRDKTLVSSLPNVAQLTVSRDGKTLYAASEVEkGVVQAWRIEKNGELTALSQvas 105
Cdd:COG3391   33 GGPLLAAASGGVVGAAVGGGGVALLAGLGLGAAAVADADGADAGADGRRLYVANSGS-GRVSVIDLATGKVVATIPV--- 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 106 gGAGPVYLSLTPDGKHLLVANYVSGSIAVlpvqedgslaeaVDRHQDEgpagaerpaaaVEGSFAIsdhnGPHAHMIAAD 185
Cdd:COG3391  109 -GGGPRGLAVDPDGGRLYVADSGNGRVSV------------IDTATGK-----------VVATIPV----GAGPHGIAVD 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488976013 186 PSGKYVYSTDLGLDRIYQ--YRLDSASGKltpndppFIAASSPGAGPRHFVFTPQGDGLWLINEEAST 251
Cdd:COG3391  161 PDGKRLYVANSGSNTVSVivSVIDTATGK-------VVATIPVGGGPVGVAVSPDGRRLYVANRGSNT 221
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
2-200 1.41e-08

DNA-binding beta-propeller fold protein YncE [General function prediction only];


Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 55.09  E-value: 1.41e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013   2 PVARHLLVASLSLFAAAAGAAQTHYAWVGtyNPNGEGLYRFtvDAKTGALRDKTLVSSLPnvAQLTVSRDGKTLYAASEv 81
Cdd:COG3391   57 LAGLGLGAAAVADADGADAGADGRRLYVA--NSGSGRVSVI--DLATGKVVATIPVGGGP--RGLAVDPDGGRLYVADS- 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  82 EKGVVQAWRIEKNGELTALSqvasGGAGPVYLSLTPDGKHLLVANYVSGSIAVLpVQedgslaeAVDRHQDEgpagaerp 161
Cdd:COG3391  130 GNGRVSVIDTATGKVVATIP----VGAGPHGIAVDPDGKRLYVANSGSNTVSVI-VS-------VIDTATGK-------- 189

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 488976013 162 aaaVEGSFAIsdhnGPHAHMIAADPSGKYVYSTDLGLDR 200
Cdd:COG3391  190 ---VVATIPV----GGGPVGVAVSPDGRRLYVANRGSNT 221
YvrE COG3386
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase ...
 182-364 1.61e-08

Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase YvrE is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 442613 [Multi-domain]  Cd Length: 266  Bit Score: 54.90  E-value: 1.61e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 182 IAADPSGK-YVYSTDLGLdriyqYRLDSASGKLTPndppfIAASS--PGAGPRHFVFTPQGdGLWL--INEEASTLTFYH 256
Cdd:COG3386   54 LAFDPDGRlLVADHGRGL-----VRFDPADGEVTV-----LADEYgkPLNRPNDGVVDPDG-RLYFtdMGEYLPTGALYR 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 257 LDKqsgllreGKTVSALPEGYkgtSFAAGLVLSNDGKQLYVANRLHNSIAHFTVLADGSLSHQE---DIWTRGDYPRTLT 333
Cdd:COG3386  123 VDP-------DGSLRVLADGL---TFPNGIAFSPDGRTLYVADTGAGRIYRFDLDADGTLGNRRvfaDLPDGPGGPDGLA 192

                        170       180       190
                 ....*....|....*....|....*....|.
gi 488976013 334 LDNQGqWLYVMNQRSDNITRFSvapKDGKLT 364
Cdd:COG3386  193 VDADG-NLWVALWGGGGVVRFD---PDGELL 219
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
 27-215 2.34e-07

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 50.06  E-value: 2.34e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  27 AWVGTYNPNGEgLYrfTVDAKTGALRdkTLVSSLPNVAQLTVSRDGKTLYAASEvEKGVVQAWRIEKNGelTALSQVASG 106
Cdd:COG0823    2 AFTLSRDGNSD-IY--VVDLDGGEPR--RLTNSPGIDTSPAWSPDGRRIAFTSD-RGGGPQIYVVDADG--GEPRRLTFG 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 107 GAGPVYLSLTPDGKHLLVANYVSGS--IAVLPVqeDGslaeavdrhqdegpaGAERPAAAVEGSFAISdhngphahmiaa 184
Cdd:COG0823   74 GGYNASPSWSPDGKRLAFVSRSDGRfdIYVLDL--DG---------------GAPRRLTDGPGSPSWS------------ 124

                        170       180       190
                 ....*....|....*....|....*....|...
gi 488976013 185 dPSGKYVY--STDLGLDRIYQYRLDSASGKLTP 215
Cdd:COG0823  125 -PDGRRIVfsSDRGGRPDLYVVDLDGRKRRLTP 156
YvrE COG3386
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase ...
 35-214 4.48e-07

Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase YvrE is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 442613 [Multi-domain]  Cd Length: 266  Bit Score: 50.66  E-value: 4.48e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  35 NGEGLYRFtvDAKTGALRdkTLVSSLPNVAQ----LTVSRDGkTLYAAS---EVEKGVVqaWRIEKNGELTalsQVASGG 107
Cdd:COG3386   67 HGRGLVRF--DPADGEVT--VLADEYGKPLNrpndGVVDPDG-RLYFTDmgeYLPTGAL--YRVDPDGSLR---VLADGL 136

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 108 AGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLAEAvdrhqdegpagaeRPAAAVEGSFAISDhnGphahmIAADPS 187
Cdd:COG3386  137 TFPNGIAFSPDGRTLYVADTGAGRIYRFDLDADGTLGNR-------------RVFADLPDGPGGPD--G-----LAVDAD 196

                        170       180
                 ....*....|....*....|....*..
gi 488976013 188 GkYVYSTDLGLDRIYQYrldSASGKLT 214
Cdd:COG3386  197 G-NLWVALWGGGGVVRF---DPDGELL 219
Vgb COG4257
Streptogramin lyase [Defense mechanisms];
28-309 2.31e-06

Streptogramin lyase [Defense mechanisms];


Pssm-ID: 443399 [Multi-domain]  Cd Length: 270  Bit Score: 48.48  E-value: 2.31e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  28 WVGtyNPNGEGLYRFtvDAKTGALRdKTLVSSLPNVAQLTVSRDGKtLYAASEVEKGVvqaWRIE-KNGELTALSqVASG 106
Cdd:COG4257   31 WFT--DQGGGRIGRL--DPATGEFT-EYPLGGGSGPHGIAVDPDGN-LWFTDNGNNRI---GRIDpKTGEITTFA-LPGG 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 107 GAGPVYLSLTPDGkHLLVANYVSGSIAVLPVqEDGSLAEavdrhqDEGPAGAERPaaavegsfaisdhngphaHMIAADP 186
Cdd:COG4257  101 GSNPHGIAFDPDG-NLWFTDQGGNRIGRLDP-ATGEVTE------FPLPTGGAGP------------------YGIAVDP 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 187 SGKyVYSTDLGLDRIYqyRLDSASGKLTPNDPPfiaasSPGAGPRHFVFTPQGDgLWLINEEASTLTfyHLDKQSGLLRE 266
Cdd:COG4257  155 DGN-LWVTDFGANAIG--RIDPDTGTLTEYALP-----TPGAGPRGLAVDPDGN-LWVADTGSGRIG--RFDPKTGTVTE 223

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 488976013 267 GKTVSALPEGYkgtsfaaGLVLSNDGKqLYVANRLHNSIAHFT 309
Cdd:COG4257  224 YPLPGGGARPY-------GVAVDGDGR-VWFAESGANRIVRFD 258
YncE COG3391
DNA-binding beta-propeller fold protein YncE [General function prediction only];
269-382 7.11e-06

DNA-binding beta-propeller fold protein YncE [General function prediction only];


Pssm-ID: 442618 [Multi-domain]  Cd Length: 237  Bit Score: 47.00  E-value: 7.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 269 TVSALPEGYKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFTvLADGSLSHQediWTRGDYPRTLTLDNQGQWLYVMNQRS 348
Cdd:COG3391   56 LLAGLGLGAAAVADADGADAGADGRRLYVANSGSGRVSVID-LATGKVVAT---IPVGGGPRGLAVDPDGGRLYVADSGN 131

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 488976013 349 DNITRFSVApkDGKLTfasDYTPVG-SPSQMVISA 382
Cdd:COG3391  132 GRVSVIDTA--TGKVV---ATIPVGaGPHGIAVDP 161
PQQ_ABC_repeats TIGR03866
PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family ...
 66-298 1.37e-04

PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.


Pssm-ID: 274824 [Multi-domain]  Cd Length: 310  Bit Score: 43.49  E-value: 1.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013   66 LTVSRDGKTLY-AASEVEKgvVQAWRIEKNGELTALSQvasgGAGPVYLSLTPDGKHLLVANYVSGSIAVLPVQEDGSLA 144
Cdd:TIGR03866  46 ITFSKDGKLLYvCASDSDT--IQVIDPATGEVLHTLPS----GPDPEQFALHPNGKILYIANEDDALVTVIDIETRKVLA 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  145 EAvdrhqdegPAGAErPaaavEGsfaisdhngphahmIAADPSGKYVYSTDLGLDRIYQyrLDSASGKLTPNDPPfiaas 224
Cdd:TIGR03866 120 QI--------DVGVE-P----EG--------------MAVSPDGKIVVNTSETTNMAHW--IDTATYEIVDNTLV----- 165

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488976013  225 spGAGPRHFVFTPQGDGLWLINEEASTLTFYHLDKQSGLlreGKTVSALPEGYKGTSFAAGLVLSNDGKQLYVA 298
Cdd:TIGR03866 166 --DARPRFAEFTADGKELWVSSEIGGTVTVIDVATRKVI---KKITFAIPGVHPEKVQPVGIKLTKDGKTAFVA 234
WD40 COG2319
WD40 repeat [General function prediction only];
45-125 2.47e-04

WD40 repeat [General function prediction only];


Pssm-ID: 441893 [Multi-domain]  Cd Length: 403  Bit Score: 42.98  E-value: 2.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  45 DAKTGALRdKTLVSSLPNVAQLTVSRDGKTLYAASevEKGVVQAWRIEKNGELTALsqvaSGGAGPVY-LSLTPDGKHLL 123
Cdd:COG2319  316 DLATGKLL-RTLTGHTGAVRSVAFSPDGKTLASGS--DDGTVRLWDLATGELLRTL----TGHTGAVTsVAFSPDGRTLA 388


                 ..
gi 488976013 124 VA 125
Cdd:COG2319  389 SG 390
PQQ_ABC_repeats TIGR03866
PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family ...
 44-138 1.22e-03

PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.


Pssm-ID: 274824 [Multi-domain]  Cd Length: 310  Bit Score: 40.41  E-value: 1.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013   44 VDAKTGALRDKTLVSSLPNVAQLTvsRDGKTLYAASEVeKGVVQAWRIEKN---GELT-ALSQVASGGAGPVYLSLTPDG 119
Cdd:TIGR03866 152 IDTATYEIVDNTLVDARPRFAEFT--ADGKELWVSSEI-GGTVTVIDVATRkviKKITfAIPGVHPEKVQPVGIKLTKDG 228

                          90
                  ....*....|....*....
gi 488976013  120 KHLLVANYVSGSIAVLPVQ 138
Cdd:TIGR03866 229 KTAFVALGPANRVAVVDAK 247
WD40 COG2319
WD40 repeat [General function prediction only];
45-127 1.28e-03

WD40 repeat [General function prediction only];


Pssm-ID: 441893 [Multi-domain]  Cd Length: 403  Bit Score: 40.66  E-value: 1.28e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  45 DAKTGALRdKTLVSSLPNVAQLTVSRDGKTLYAASevEKGVVQAWRIEKNGELTALsqvaSGGAGPVY-LSLTPDGKHLL 123
Cdd:COG2319  232 DLATGKLL-RTLTGHSGSVRSVAFSPDGRLLASGS--ADGTVRLWDLATGELLRTL----TGHSGGVNsVAFSPDGKLLA 304


                 ....
gi 488976013 124 VANY 127
Cdd:COG2319  305 SGSD 308
WD40 COG2319
WD40 repeat [General function prediction only];
45-125 3.08e-03

WD40 repeat [General function prediction only];


Pssm-ID: 441893 [Multi-domain]  Cd Length: 403  Bit Score: 39.51  E-value: 3.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  45 DAKTGALRdKTLVSSLPNVAQLTVSRDGKTLYAASevEKGVVQAWRIEKNGELTALsqvaSGGAGPVY-LSLTPDGKHLL 123
Cdd:COG2319  190 DLATGKLL-RTLTGHTGAVRSVAFSPDGKLLASGS--ADGTVRLWDLATGKLLRTL----TGHSGSVRsVAFSPDGRLLA 262


                 ..
gi 488976013 124 VA 125
Cdd:COG2319  263 SG 264
NHL_like_6 cd14962
Uncharacterized NHL-repeat domain in bacterial proteins; The NHL (NCL-1, HT2A and LIN-41) ...
 156-362 3.69e-03

Uncharacterized NHL-repeat domain in bacterial proteins; The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.


Pssm-ID: 271332 [Multi-domain]  Cd Length: 271  Bit Score: 38.72  E-value: 3.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 156 AGAERPAAAVegsfaisdhNGPHAhmIAADPSGKyVYSTDLGLDRIYQYrlDSASGKLTPNDPpfiaasspgAGPRHFVf 235
Cdd:cd14962    2 TGEERPKEAL---------TRPYG--VAADGRGR-IYVADTGRGAVFVF--DLPNGKVFVIGN---------AGPNRFV- 57

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013 236 TPQG------DGLWLINEEASTLtfYHLDkqsgllREGKTVSALPEGyKGTSFAAGLVLSNDGKQLYVANRLHNSIAHFT 309
Cdd:cd14962   58 SPIGvaidanGNLYVSDAELGKV--FVFD------RDGKFLRAIGAG-ALFKRPTGIAVDPAGKRLYVVDTLAHKVKVFD 128

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488976013 310 vlADGslSHQEDIWTRGD------YPRTLTLDNQGQwLYV---MNQRsdnITRFSvapKDGK 362
Cdd:cd14962  129 --LDG--RLLFDIGKRGSgpgefnLPTDLAVDRDGN-LYVtdtMNFR---VQIFD---ADGK 179
DUF1513 pfam07433
Protein of unknown function (DUF1513); This entry represents bacterial proteins that are ...
 67-126 4.10e-03

Protein of unknown function (DUF1513); This entry represents bacterial proteins that are predicted to be the outer membrane component of an efeUOB-like ferrous iron, uptake system.


Pssm-ID: 429460  Cd Length: 304  Bit Score: 38.82  E-value: 4.10e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488976013   67 TVSRDGKTLYAaSEVE----KGVVQAWRIEknGELTALSQVASGGAGPVYLSLTPDGKHLLVAN 126
Cdd:pfam07433  57 VFSADGRLLYT-TENDletgRGVIGVYDAR--DGLVRVGEWSTGGIGPHELILMPDGETLVVAN 117
COG3490 COG3490
Uncharacterized conserved protein, DUF1513 domain [Function unknown];
69-126 4.42e-03

Uncharacterized conserved protein, DUF1513 domain [Function unknown];


Pssm-ID: 442713 [Multi-domain]  Cd Length: 365  Bit Score: 38.69  E-value: 4.42e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488976013  69 SRDGKTLYAaSEVEK----GVVQAWRIEknGELTALSQVASGGAGPVYLSLTPDGKHLLVAN 126
Cdd:COG3490  118 SPDGRLLYT-TENDFetgrGVIGVYDAR--DGYRRIGEFPSHGIGPHELLLMPDGRTLVVAN 176
WD40 COG2319
WD40 repeat [General function prediction only];
45-125 4.62e-03

WD40 repeat [General function prediction only];


Pssm-ID: 441893 [Multi-domain]  Cd Length: 403  Bit Score: 38.74  E-value: 4.62e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488976013  45 DAKTGALRdKTLVSSLPNVAQLTVSRDGKTLYAASevEKGVVQAWRIEKNGELTALsqvaSGGAGPVY-LSLTPDGKHLL 123
Cdd:COG2319  148 DLATGKLL-RTLTGHSGAVTSVAFSPDGKLLASGS--DDGTVRLWDLATGKLLRTL----TGHTGAVRsVAFSPDGKLLA 220


                 ..
gi 488976013 124 VA 125
Cdd:COG2319  221 SG 222
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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