|
Name |
Accession |
Description |
Interval |
E-value |
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
5-306 |
1.38e-135 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 386.01 E-value: 1.38e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNNTADIENFPGF-KSVLGPDLSKDMYESSTQFGAEYAYGSVE 83
Cdd:COG0492 1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEGGEPGGQLATTKEIENYPGFpEGISGPELAERLREQAERFGAEILLEEVT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 84 SIRDDGATKLVKTDMGDEFEAKVVIIGTGSEYKKLGVPGEEDFSGRGVSYCAVCDGAFFKGTDVVVVGGGDSAIEEGLYL 163
Cdd:COG0492 81 SVDKDDGPFRVTTDDGTEYEAKAVIIATGAGPRKLGLPGEEEFEGRGVSYCATCDGFFFRGKDVVVVGGGDSALEEALYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 164 TQLASKVTVIHRRDQLRAQKIIQDRAFANPKMEFVWNSNVTEVVGEGKVTGVKVNNNQTGEDSFIEAAGIFIYVGVKPMT 243
Cdd:COG0492 161 TKFASKVTLIHRRDELRASKILVERLRANPKIEVLWNTEVTEIEGDGRVEGVTLKNVKTGEEKELEVDGVFVAIGLKPNT 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488923010 244 AAFADLGI-LDEQGWIPTDDHMHTKVPGILAVGDVRKKDLRQITTAVGDGGVAGQQAYEYIQAL 306
Cdd:COG0492 241 ELLKGLGLeLDEDGYIVVDEDMETSVPGVFAAGDVRDYKYRQAATAAGEGAIAALSAARYLEPL 304
|
|
| TRX_reduct |
TIGR01292 |
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a ... |
6-303 |
5.74e-132 |
|
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport]
Pssm-ID: 273540 [Multi-domain] Cd Length: 299 Bit Score: 376.97 E-value: 5.74e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNNTADIENFPGFKS-VLGPDLSKDMYESSTQFGAEYAYGSVES 84
Cdd:TIGR01292 1 DVIIIGAGPAGLTAAIYAARANLKPLLIEGMEPGGQLTTTTEVENYPGFPEgISGPELMEKMKEQAVKFGAEIIYEEVIK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 85 IRDDGATKLVKTDMGDEFEAKVVIIGTGSEYKKLGVPGEEDFSGRGVSYCAVCDGAFFKGTDVVVVGGGDSAIEEGLYLT 164
Cdd:TIGR01292 81 VDKSDRPFKVYTGDGKEYTAKAVIIATGASARKLGIPGEDEFWGRGVSYCATCDGPFFKNKEVAVVGGGDSAIEEALYLT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 165 QLASKVTVIHRRDQLRAQKIIQDRAFANPKMEFVWNSNVTEVVGEGKVTGVKVNNNQTGEDSFIEAAGIFIYVGVKPMTA 244
Cdd:TIGR01292 161 RIAKKVTLVHRRDKFRAEKILLDRLKKNPKIEFLWNSTVEEIVGDNKVEGVKIKNTVTGEEEELEVDGVFIAIGHEPNTE 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 488923010 245 AFADLGILDEQGWIPTDDHMHTKVPGILAVGDVRKKDLRQITTAVGDGGVAGQQAYEYI 303
Cdd:TIGR01292 241 LLKGLLELDENGYIVTDEGMRTSVPGVFAAGDVRDKGYRQAVTAAGDGCIAALSAERYL 299
|
|
| AhpF_homolog |
TIGR03143 |
putative alkyl hydroperoxide reductase F subunit; This family of thioredoxin reductase ... |
1-306 |
2.64e-93 |
|
putative alkyl hydroperoxide reductase F subunit; This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Pssm-ID: 132187 [Multi-domain] Cd Length: 555 Bit Score: 287.06 E-value: 2.64e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNNTADIENFPGFKSVLGPDLSKDMYESSTQFGAEYAYG 80
Cdd:TIGR03143 1 MEEIYDLIIIGGGPAGLSAGIYAGRAKLDTLIIEKDDFGGQITITSEVVNYPGILNTTGPELMQEMRQQAQDFGVKFLQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 81 SVESIRDDGATKLVKTDMGDeFEAKVVIIGTGSEYKKLGVPGEEDFSGRGVSYCAVCDGAFFKGTDVVVVGGGDSAIEEG 160
Cdd:TIGR03143 81 EVLDVDFDGDIKTIKTARGD-YKTLAVLIATGASPRKLGFPGEEEFTGRGVAYCATCDGEFFTGMDVFVIGGGFAAAEEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 161 LYLTQLASKVTVIHRRDQLRAQKIIQDRAFANPKMEFVWNSNVTEVVGEGKVTGVKVNNNQTGEDSFIEAA------GIF 234
Cdd:TIGR03143 160 VFLTRYASKVTVIVREPDFTCAKLIAEKVKNHPKIEVKFNTELKEATGDDGLRYAKFVNNVTGEITEYKAPkdagtfGVF 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488923010 235 IYVGVKPMTAAFADLGILDEQGWIPTDDHMHTKVPGILAVGDVRKKDLRQITTAVGDGGVAGQQAYEYIQAL 306
Cdd:TIGR03143 240 VFVGYAPSSELFKGVVELDKRGYIPTNEDMETNVPGVYAAGDLRPKELRQVVTAVADGAIAATSAERYVKEL 311
|
|
| PRK15317 |
PRK15317 |
alkyl hydroperoxide reductase subunit F; Provisional |
5-303 |
4.26e-60 |
|
alkyl hydroperoxide reductase subunit F; Provisional
Pssm-ID: 237942 [Multi-domain] Cd Length: 517 Bit Score: 199.61 E-value: 4.26e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSV-VMLDRgiYGGQMNNTADIENFPGFKSVLGPDLSKDMYESStqfgAEYAYGSVE 83
Cdd:PRK15317 212 YDVLVVGGGPAGAAAAIYAARKGIRTgIVAER--FGGQVLDTMGIENFISVPETEGPKLAAALEEHV----KEYDVDIMN 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 84 SIRddgATKLVKTDM--------GDEFEAKVVIIGTGSEYKKLGVPGEEDFSGRGVSYCAVCDGAFFKGTDVVVVGGGDS 155
Cdd:PRK15317 286 LQR---ASKLEPAAGlievelanGAVLKAKTVILATGARWRNMNVPGEDEYRNKGVAYCPHCDGPLFKGKRVAVIGGGNS 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 156 AIEEGLYLTQLASKVTVIHRRDQLRAQKIIQDRAFANPKMEFVWNSNVTEVVGEG-KVTGVKVNNNQTGEDSFIEAAGIF 234
Cdd:PRK15317 363 GVEAAIDLAGIVKHVTVLEFAPELKADQVLQDKLRSLPNVTIITNAQTTEVTGDGdKVTGLTYKDRTTGEEHHLELEGVF 442
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488923010 235 IYVGVKPMTAAFADLGILDEQGWIPTDDHMHTKVPGILAVGDVRKKDLRQITTAVGDGGVAGQQAYEYI 303
Cdd:PRK15317 443 VQIGLVPNTEWLKGTVELNRRGEIIVDARGATSVPGVFAAGDCTTVPYKQIIIAMGEGAKAALSAFDYL 511
|
|
| PRK10262 |
PRK10262 |
thioredoxin reductase; Provisional |
2-308 |
9.48e-56 |
|
thioredoxin reductase; Provisional
Pssm-ID: 182343 [Multi-domain] Cd Length: 321 Bit Score: 183.34 E-value: 9.48e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNNTADIENFPGFKSVL-GPDLSKDMYESSTQFGAEYAYG 80
Cdd:PRK10262 4 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLtGPLLMERMHEHATKFETEIIFD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 81 SVESIRDDGATKLVKTDMGdEFEAKVVIIGTGSEYKKLGVPGEEDFSGRGVSYCAVCDGAFFKGTDVVVVGGGDSAIEEG 160
Cdd:PRK10262 84 HINKVDLQNRPFRLTGDSG-EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 161 LYLTQLASKVTVIHRRDQLRAQKIIQDRAF---ANPKMEFVWNSNVTEVVGEGK-VTGVKVNNNQTGED-SFIEAAGIFI 235
Cdd:PRK10262 163 LYLSNIASEVHLIHRRDGFRAEKILIKRLMdkvENGNIILHTNRTLEEVTGDQMgVTGVRLRDTQNSDNiESLDVAGLFV 242
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488923010 236 YVGVKPMTAAFAdlGILD-EQGWIPTDDHMH-----TKVPGILAVGDVRKKDLRQITTAVGDGGVAGQQAYEYIQALND 308
Cdd:PRK10262 243 AIGHSPNTAIFE--GQLElENGYIKVQSGIHgnatqTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLAD 319
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
5-292 |
2.98e-49 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 165.95 E-value: 2.98e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRG--IYGGQMNNTADIENFPGFKSVL--GPDLSKDMYESSTQFGAEYAY- 79
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEgtCPYGGCVLSKALLGAAEAPEIAslWADLYKRKEEVVKKLNNGIEVl 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 80 --GSVESIRDDGAT-KLVKTDMGDEFE--AKVVIIGTGSEYKKLGVPGEEDFSGRGVSYCAVCDGAFFKGTDVVVVG--G 152
Cdd:pfam07992 81 lgTEVVSIDPGAKKvVLEELVDGDGETitYDRLVIATGARPRLPPIPGVELNVGFLVRTLDSAEALRLKLLPKRVVVvgG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 153 GDSAIEEGLYLTQLASKVTVIHRRDQL------RAQKIIQDRaFANPKMEFVWNSNVTEVVGEGKVTGVKVNNNQTgeds 226
Cdd:pfam07992 161 GYIGVELAAALAKLGKEVTLIEALDRLlrafdeEISAALEKA-LEKNGVEVRLGTSVKEIIGDGDGVEVILKDGTE---- 235
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 488923010 227 fIEAAGIFIYVGVKPMTAAFADLGI-LDEQGWIPTDDHMHTKVPGILAVGDVRKKDLRQITTAVGDG 292
Cdd:pfam07992 236 -IDADLVVVAIGRRPNTELLEAAGLeLDERGGIVVDEYLRTSVPGIYAAGDCRVGGPELAQNAVAQG 301
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
2-277 |
7.71e-25 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 103.72 E-value: 7.71e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGG---------------------QMNNTADIENFPGFKSVLGP 60
Cdd:PRK06292 1 MEKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGPLGGtclnvgcipskaliaaaeafhEAKHAEEFGIHADGPKIDFK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 61 -----------DLSKDMYESSTQFGAEYAYGSVESIRDDGatkLVKTDmGDEFEAKVVIIGTGSeyKKLGVPGEED-FSG 128
Cdd:PRK06292 81 kvmarvrrerdRFVGGVVEGLEKKPKIDKIKGTARFVDPN---TVEVN-GERIEAKNIVIATGS--RVPPIPGVWLiLGD 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 129 RGVSYcavcDGAFFkgtdvvVVGGGDS---------AIEEGLYLTQLASKVTVIHRRDQL----------RAQKIIQDRa 189
Cdd:PRK06292 155 RLLTS----DDAFE------LDKLPKSlavigggviGLELGQALSRLGVKVTVFERGDRIlpledpevskQAQKILSKE- 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 190 fanpkMEFVWNSNVTEVVGEGKVtgVKVNNNQTGEDSFIEAAGIFIYVGVKPMTAA--FADLGI-LDEQGWIPTDDHMHT 266
Cdd:PRK06292 224 -----FKIKLGAKVTSVEKSGDE--KVEELEKGGKTETIEADYVLVATGRRPNTDGlgLENTGIeLDERGRPVVDEHTQT 296
|
330
....*....|.
gi 488923010 267 KVPGILAVGDV 277
Cdd:PRK06292 297 SVPGIYAAGDV 307
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
2-277 |
4.81e-24 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 101.32 E-value: 4.81e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGG------------------QMNNTADIENFpGFK-SVLGPDL 62
Cdd:COG1249 1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGRLGGtclnvgcipskallhaaeVAHEARHAAEF-GISaGAPSVDW 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 63 SKdMYESSTQFGAEYAYGSVESIRDDGATKL-----------VKTDMGDEFEAKVVIIGTGSEYKKLGVPGEEDfsGRGV 131
Cdd:COG1249 80 AA-LMARKDKVVDRLRGGVEELLKKNGVDVIrgrarfvdphtVEVTGGETLTADHIVIATGSRPRVPPIPGLDE--VRVL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 132 SYcavcDGAFfkgtdvvvvgggdsAIEE-------------GL----YLTQLASKVTVIHRRDQL------RAQKIIQdR 188
Cdd:COG1249 157 TS----DEAL--------------ELEElpkslvvigggyiGLefaqIFARLGSEVTLVERGDRLlpgedpEISEALE-K 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 189 AFANPKMEFVWNSNVTEVVGEGKvtGVKVNNNQTGEDSFIEAAGIFIYVGVKPMTAAF--ADLGI-LDEQGWIPTDDHMH 265
Cdd:COG1249 218 ALEKEGIDILTGAKVTSVEKTGD--GVTVTLEDGGGEEAVEADKVLVATGRRPNTDGLglEAAGVeLDERGGIKVDEYLR 295
|
330
....*....|..
gi 488923010 266 TKVPGILAVGDV 277
Cdd:COG1249 296 TSVPGIYAIGDV 307
|
|
| lipoamide_DH |
TIGR01350 |
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ... |
5-280 |
9.51e-17 |
|
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Pssm-ID: 273568 [Multi-domain] Cd Length: 460 Bit Score: 79.99 E-value: 9.51e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQ------------MNNTADIENFPGFK----SVLGPDLS-KDMY 67
Cdd:TIGR01350 2 YDVIVIGGGPGGYVAAIRAAQLGLKVALVEKEYLGGTclnvgciptkalLHSAEVYDEIKHAKdlgiEVENVSVDwEKMQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 68 ESSTQF------GAEYAYGS--VE------SIRDDGATKLVKTDMGDEFEAKVVIIGTGSEYKKLgvPGEEDFSGRGV-- 131
Cdd:TIGR01350 82 KRKNKVvkklvgGVSGLLKKnkVTvikgeaKFLDPGTVSVTGENGEETLEAKNIIIATGSRPRSL--PGPFDFDGKVVit 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 132 SycavcDGAF-FKGTDVVVVGGGDSAI--EEGLYLTQLASKVTVIHRRDQLRAQ------KIIQdRAFANPKMEFVWNSN 202
Cdd:TIGR01350 160 S-----TGALnLEEVPESLVIIGGGVIgiEFASIFASLGSKVTVIEMLDRILPGedaevsKVLQ-KALKKKGVKILTNTK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 203 VTEVVGEGKvtGVKVNNNQTGEDSfIEAAGIFIYVGVKPMT--AAFADLGI-LDEQGWIPTDDHMHTKVPGILAVGDVRK 279
Cdd:TIGR01350 234 VTAVEKNDD--QVTYENKGGETET-LTGEKVLVAVGRKPNTegLGLEKLGVeLDERGRIVVDEYMRTNVPGIYAIGDVIG 310
|
.
gi 488923010 280 K 280
Cdd:TIGR01350 311 G 311
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
1-277 |
4.12e-14 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 72.10 E-value: 4.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGG------------------QMNNTADIENFpGFKSVL-GPD 61
Cdd:PRK06416 1 FAFEYDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKEKLGGtclnrgcipskallhaaeRADEARHSEDF-GIKAENvGID 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 62 LSKDmyesstqfgAEYAYGSVESIRDdGATKLVK----------------------TDMGDE-FEAKVVIIGTGSEYKKL 118
Cdd:PRK06416 80 FKKV---------QEWKNGVVNRLTG-GVEGLLKknkvdiirgeaklvdpntvrvmTEDGEQtYTAKNIILATGSRPREL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 119 gvPGEEdFSGRGVSYCavcDGAFfkgtdvVVVGGGDSAI---------EEGLYLTQLASKVTVIHRRDQLRA------QK 183
Cdd:PRK06416 150 --PGIE-IDGRVIWTS---DEAL------NLDEVPKSLVvigggyigvEFASAYASLGAEVTIVEALPRILPgedkeiSK 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 184 IIQdRAFANPKMEFVWNSNVTEVvgEGKVTGVKVNNNQTGEDSFIEAAGIFIYVGVKPMTAA--FADLGILDEQGWIPTD 261
Cdd:PRK06416 218 LAE-RALKKRGIKIKTGAKAKKV--EQTDDGVTVTLEDGGKEETLEADYVLVAVGRRPNTENlgLEELGVKTDRGFIEVD 294
|
330
....*....|....*.
gi 488923010 262 DHMHTKVPGILAVGDV 277
Cdd:PRK06416 295 EQLRTNVPNIYAIGDI 310
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
6-308 |
8.36e-14 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 71.33 E-value: 8.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 6 DVVIIGAGPAGMTAA--LYASRANLSVVML--------DR----GIYGGQMNnTADIenfpgfksVLGPDlskDMYEsst 71
Cdd:COG1251 3 RIVIIGAGMAGVRAAeeLRKLDPDGEITVIgaephppyNRpplsKVLAGETD-EEDL--------LLRPA---DFYE--- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 72 QFGAEYAYGS-VESIrdDGATKLVKTDMGDEFEAKVVIIGTGSEYKKLGVPGEEdfsGRGVSYC---AVCDgaffkgtdv 147
Cdd:COG1251 68 ENGIDLRLGTrVTAI--DRAARTVTLADGETLPYDKLVLATGSRPRVPPIPGAD---LPGVFTLrtlDDAD--------- 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 148 vvvgggdsAIEE----------------GL----YLTQLASKVTVIHRRDQL-------RAQKIIQdRAFANPKMEFVWN 200
Cdd:COG1251 134 --------ALRAalapgkrvvvigggliGLeaaaALRKRGLEVTVVERAPRLlprqldeEAGALLQ-RLLEALGVEVRLG 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 201 SNVTEVVGEGKVTGVKVNNNQTgedsfIEAAGIFIYVGVKPMTAAFADLGILDEQGwIPTDDHMHTKVPGILAVGDVrkk 280
Cdd:COG1251 205 TGVTEIEGDDRVTGVRLADGEE-----LPADLVVVAIGVRPNTELARAAGLAVDRG-IVVDDYLRTSDPDIYAAGDC--- 275
|
330 340
....*....|....*....|....*...
gi 488923010 281 dlrqittAVGDGGVAGQQAYEYIQALND 308
Cdd:COG1251 276 -------AEHPGPVYGRRVLELVAPAYE 296
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
1-277 |
5.51e-13 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 69.08 E-value: 5.51e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNNT---------------ADIENFPGFKSVLGPDLSKD 65
Cdd:PRK06370 2 PAQRYDAIVIGAGQAGPPLAARAAGLGMKVALIERGLLGGTCVNTgcvptktliasaraaHLARRAAEYGVSVGGPVSVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 66 M---YESSTQFGAEYAYGSVESIRD-DGAT-----------KLVKTDmGDEFEAKVVIIGTGSEYKKLGVPGEEDfsgrg 130
Cdd:PRK06370 82 FkavMARKRRIRARSRHGSEQWLRGlEGVDvfrgharfespNTVRVG-GETLRAKRIFINTGARAAIPPIPGLDE----- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 131 VSY---------------CAVCDGaffkgtdvvvvgggdSAIeeGLYLTQ----LASKVTVIHRRDQL------RAQKII 185
Cdd:PRK06370 156 VGYltnetifsldelpehLVIIGG---------------GYI--GLEFAQmfrrFGSEVTVIERGPRLlpredeDVAAAV 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 186 QDrAFANPKMEFVWNSNVTEVVGEGkvTGVKVNNNQTGEDSFIEAAGIFIYVGVKPMTAafaDLGI------LDEQGWIP 259
Cdd:PRK06370 219 RE-ILEREGIDVRLNAECIRVERDG--DGIAVGLDCNGGAPEITGSHILVAVGRVPNTD---DLGLeaagveTDARGYIK 292
|
330
....*....|....*...
gi 488923010 260 TDDHMHTKVPGILAVGDV 277
Cdd:PRK06370 293 VDDQLRTTNPGIYAAGDC 310
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
82-277 |
9.51e-13 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 67.53 E-value: 9.51e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 82 VESIrdDGATKLVKTDMGDEFEAKVVIIGTGSEYKKLGVPGEEdfsGRGVSYCAVCDGAffkgtdvvvvGGGDSAIEE-- 159
Cdd:COG0446 59 VTAI--DPEAKTVTLRDGETLSYDKLVLATGARPRPPPIPGLD---LPGVFTLRTLDDA----------DALREALKEfk 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 160 ------------GL----YLTQLASKVTVIHRRDQL----------RAQKIIQDRafanpKMEFVWNSNVTEVVGEGKVT 213
Cdd:COG0446 124 gkravvigggpiGLelaeALRKRGLKVTLVERAPRLlgvldpemaaLLEEELREH-----GVELRLGETVVAIDGDDKVA 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488923010 214 gVKVNNNQTgedsfIEAAGIFIYVGVKPMTAAFADLGI-LDEQGWIPTDDHMHTKVPGILAVGDV 277
Cdd:COG0446 199 -VTLTDGEE-----IPADLVVVAPGVRPNTELAKDAGLaLGERGWIKVDETLQTSDPDVYAAGDC 257
|
|
| PRK06327 |
PRK06327 |
dihydrolipoamide dehydrogenase; Validated |
1-277 |
2.42e-12 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235779 [Multi-domain] Cd Length: 475 Bit Score: 66.87 E-value: 2.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDrgiyggqmnntaDIENFPGFKSVLGPDL------SKDMYESSTQF- 73
Cdd:PRK06327 1 MSKQFDVVVIGAGPGGYVAAIRAAQLGLKVACIE------------AWKNPKGKPALGGTCLnvgcipSKALLASSEEFe 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 74 ------------------------------------GAEY-----------AYGSVESIRDDGATKLVKTDMGDEFEAKV 106
Cdd:PRK06327 69 naghhfadhgihvdgvkidvakmiarkdkvvkkmtgGIEGlfkknkitvlkGRGSFVGKTDAGYEIKVTGEDETVITAKH 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 107 VIIGTGSEYKKL-GVPgeedFSGRGVsycaVC-DGAF-FKGTDVVVVGGGDSAI--EEGLYLTQLASKVTVIHRRDQLRA 181
Cdd:PRK06327 149 VIIATGSEPRHLpGVP----FDNKII----LDnTGALnFTEVPKKLAVIGAGVIglELGSVWRRLGAEVTILEALPAFLA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 182 ---QKIIQD--RAFANPKMEFVWNSNVTEVVGEGKvtGVKVN-NNQTGEDSFIEAAGIFIYVGVKPMTAafaDLG----- 250
Cdd:PRK06327 221 aadEQVAKEaaKAFTKQGLDIHLGVKIGEIKTGGK--GVSVAyTDADGEAQTLEVDKLIVSIGRVPNTD---GLGleavg 295
|
330 340
....*....|....*....|....*...
gi 488923010 251 -ILDEQGWIPTDDHMHTKVPGILAVGDV 277
Cdd:PRK06327 296 lKLDERGFIPVDDHCRTNVPNVYAIGDV 323
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
7-292 |
2.65e-12 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 66.70 E-value: 2.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLDR-----GI--YGgqmnntadIenfPGFKsvlgpdLSKDMYEsstqfgAEyay 79
Cdd:COG0493 124 VAVVGSGPAGLAAAYQLARAGHEVTVFEAldkpgGLlrYG--------I---PEFR------LPKDVLD------RE--- 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 80 gsVESIRDDGATKLVKTDMG---------DEFEAkvVIIGTGSE-YKKLGVPGEEdfsGRGVsycavcdgaffkgtdvvv 149
Cdd:COG0493 178 --IELIEALGVEFRTNVEVGkditldellEEFDA--VFLATGAGkPRDLGIPGED---LKGV------------------ 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 150 vgggDSAIEeglYLTQL------------------------------------ASKVTVIHRRDqlraqkiiQDRAFANP 193
Cdd:COG0493 233 ----HSAMD---FLTAVnlgeapdtilavgkrvvvigggntamdcartalrlgAESVTIVYRRT--------REEMPASK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 194 K---------MEFVWNSNVTEVVGE--GKVTGVKVNNNQ---------------TGEDSFIEAAGIFIYVGVKP-MTAAF 246
Cdd:COG0493 298 EeveealeegVEFLFLVAPVEIIGDenGRVTGLECVRMElgepdesgrrrpvpiEGSEFTLPADLVILAIGQTPdPSGLE 377
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 488923010 247 ADLGI-LDEQGWIPTD-DHMHTKVPGILAVGD-VRKKDLrqITTAVGDG 292
Cdd:COG0493 378 EELGLeLDKRGTIVVDeETYQTSLPGVFAGGDaVRGPSL--VVWAIAEG 424
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
7-292 |
3.63e-12 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 66.34 E-value: 3.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLDR----------GIyggqmnntadienfPGFKsvlgpdLSKD--------Mye 68
Cdd:PRK12810 146 VAVVGSGPAGLAAADQLARAGHKVTVFERadriggllryGI--------------PDFK------LEKEvidrrielM-- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 69 ssTQFGAEYAYGsVESIRDDGATKLVktdmgDEFEAkvVIIGTGSE-YKKLGVPGEEdfsgrgvsycavCDGAFFkgtdv 147
Cdd:PRK12810 204 --EAEGIEFRTN-VEVGKDITAEELL-----AEYDA--VFLGTGAYkPRDLGIPGRD------------LDGVHF----- 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 148 vvvgggdsAIEeglYLTQ--------------LAS--KVTVI-------------HRrdqLRAQKIIQ---------DRA 189
Cdd:PRK12810 257 --------AMD---FLIQntrrvlgdetepfiSAKgkHVVVIgggdtgmdcvgtaIR---QGAKSVTQrdimpmppsRRN 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 190 FANP------KME----------FVWNSNVTEVVGE-GKVTGVKVNNNQTGEDSFIEAAG---------IFIYVG-VKPM 242
Cdd:PRK12810 323 KNNPwpywpmKLEvsnaheegveREFNVQTKEFEGEnGKVTGVKVVRTELGEGDFEPVEGsefvlpadlVLLAMGfTGPE 402
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 488923010 243 TAAFADLGI-LDEQGWIPTDDHMH-TKVPGILAVGD-VRKKDLrqITTAVGDG 292
Cdd:PRK12810 403 AGLLAQFGVeLDERGRVAAPDNAYqTSNPKVFAAGDmRRGQSL--VVWAIAEG 453
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
1-129 |
5.16e-11 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 62.96 E-value: 5.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRG--IyGG--QMNN----TADIEN----FPGFKSVLGP-------- 60
Cdd:COG2072 3 ATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKAddV-GGtwRDNRypglRLDTPShlysLPFFPNWSDDpdfptgde 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 61 ------------DLSKDMyesstQFGAEyaygsVESIRDDGATKL--VKTDMGDEFEAKVVIIGTG--SEYKKLGVPGEE 124
Cdd:COG2072 82 ilayleayadkfGLRRPI-----RFGTE-----VTSARWDEADGRwtVTTDDGETLTARFVVVATGplSRPKIPDIPGLE 151
|
....*
gi 488923010 125 DFSGR 129
Cdd:COG2072 152 DFAGE 156
|
|
| PRK07251 |
PRK07251 |
FAD-containing oxidoreductase; |
2-277 |
7.49e-11 |
|
FAD-containing oxidoreductase;
Pssm-ID: 180907 [Multi-domain] Cd Length: 438 Bit Score: 62.46 E-value: 7.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRG--IYGGQMNNTADI---------ENFPGF------KSVLGPDLSK 64
Cdd:PRK07251 1 MLTYDLIVIGFGKAGKTLAAKLASAGKKVALVEESkaMYGGTCINIGCIptktllvaaEKNLSFeqvmatKNTVTSRLRG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 65 DMYESSTQFGAEYAYGSVESIrddgATKLVKTDMGD---EFEAKVVIIGTGSEYKKLGVPGEED----FSGRGV------ 131
Cdd:PRK07251 81 KNYAMLAGSGVDLYDAEAHFV----SNKVIEVQAGDekiELTAETIVINTGAVSNVLPIPGLADskhvYDSTGIqsletl 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 132 -SYCAVCDGAffkgtdvvvvgggDSAIE-EGLYlTQLASKVTVIHRRDQL--RAQKIIQdrAFANPKME-----FVWNSN 202
Cdd:PRK07251 157 pERLGIIGGG-------------NIGLEfAGLY-NKLGSKVTVLDAASTIlpREEPSVA--ALAKQYMEedgitFLLNAH 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 203 VTEVVGEGKVTGVKVNNNQTGEDSFIEAagifiyVGVKPMTAafaDLGI------LDEQGWIPTDDHMHTKVPGILAVGD 276
Cdd:PRK07251 221 TTEVKNDGDQVLVVTEDETYRFDALLYA------TGRKPNTE---PLGLentdieLTERGAIKVDDYCQTSVPGVFAVGD 291
|
.
gi 488923010 277 V 277
Cdd:PRK07251 292 V 292
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
154-219 |
1.33e-10 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 56.83 E-value: 1.33e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488923010 154 DSAIEEGLYLTQLASKVTVIHRRDQLR------AQKIIQDRAFANpKMEFVWNSNVTEVVGEGKVTGVKVNN 219
Cdd:pfam00070 9 YIGLELAGALARLGSKVTVVERRDRLLpgfdpeIAKILQEKLEKN-GIEFLLNTTVEAIEGNGDGVVVVLTD 79
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
8-119 |
2.18e-09 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 57.75 E-value: 2.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 8 VIIGAGPAGMTAALYASRANLSVVMLDRG------IY---GGQMN--NTADIENF-------PGF-KSVLG--------- 59
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNpkvgrkILisgGGRCNftNSEPLPEFlnyyggnPHFlKSALSrftpedlia 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 60 ------------------PDLSK-----DMYES-STQFGAEYAYGS-VESIRDDGATKLVKTDMGDEFEAKVVIIGTG-- 112
Cdd:COG2081 81 ffeglgietkeessgrvfPDSSKasdilRALLAeLREAGVEIRLRTrVTGIEKEDGGFGVETPDGETVRADAVVLATGgl 160
|
....*..
gi 488923010 113 SeYKKLG 119
Cdd:COG2081 161 S-YPKLG 166
|
|
| COG2509 |
COG2509 |
FAD-dependent dehydrogenase [General function prediction only]; |
2-36 |
3.63e-09 |
|
FAD-dependent dehydrogenase [General function prediction only];
Pssm-ID: 441999 [Multi-domain] Cd Length: 466 Bit Score: 57.43 E-value: 3.63e-09
10 20 30
....*....|....*....|....*....|....*
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:COG2509 28 SLKYDVVIVGAGPAGLFAALELAEAGLKPLVLERG 62
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
7-305 |
4.86e-09 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 56.54 E-value: 4.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNntadIENFPGFK--------SVlgpdlsKDMYESSTQFGAE-Y 77
Cdd:PRK12770 21 VAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLM----LFGIPEFRipiervreGV------KELEEAGVVFHTRtK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 78 AYGSVESIRDDG---ATKLVK-TDMGDEFEAkvVIIGTGS-EYKKLGVPGEE---------------------------- 124
Cdd:PRK12770 91 VCCGEPLHEEEGdefVERIVSlEELVKKYDA--VLIATGTwKSRKLGIPGEDlpgvysaleylfriraaklgylpwekvp 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 125 DFSGRGVsycaVCDGAffkgtdvvvvggGDSAI---EEGLYLTqlASKVTVIHRRDQLRA-------QKIIQDRAfanpk 194
Cdd:PRK12770 169 PVEGKKV----VVVGA------------GLTAVdaaLEAVLLG--AEKVYLAYRRTINEApagkyeiERLIARGV----- 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 195 mEFVWNSNVTEVVGEGKVTGVKVNNNQ---------------TGEDSFIEAAGIFIYVGVKPmTAAFA--DLGI-LDEQG 256
Cdd:PRK12770 226 -EFLELVTPVRIIGEGRVEGVELAKMRlgepdesgrprpvpiPGSEFVLEADTVVFAIGEIP-TPPFAkeCLGIeLNRKG 303
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 488923010 257 WIPTDDHMHTKVPGILAVGDVRKKDlRQITTAVGDGGVAGQQAYEYIQA 305
Cdd:PRK12770 304 EIVVDEKHMTSREGVFAAGDVVTGP-SKIGKAIKSGLRAAQSIHEWLDL 351
|
|
| TIGR00275 |
TIGR00275 |
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ... |
8-119 |
1.46e-08 |
|
flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 272992 [Multi-domain] Cd Length: 400 Bit Score: 55.29 E-value: 1.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 8 VIIGAGPAGMTAALYASRANLSVVMLDR-----------GiyGGQMN--NTADIENF-------PGF-KSVL-------- 58
Cdd:TIGR00275 1 IIIGGGAAGLMAAITAARAGLSVLLLEKnkkigkkllisG--GGRCNltNSCPTPEFvayyprnGKFlRSALsrfsnkdl 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 59 -------GPDLSKD----MY----ESST----------QFGAEYAYGS-VESIRDDGATKLVKTDmGDEFEAKVVIIGTG 112
Cdd:TIGR00275 79 idffeslGLELKVEedgrVFpcsdSAADvldallnelkELGVEILTNSkVKSIEKEDGGFGVETS-GGEYEADKVIIATG 157
|
....*...
gi 488923010 113 SE-YKKLG 119
Cdd:TIGR00275 158 GLsYPQLG 165
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
6-277 |
1.58e-08 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 55.14 E-value: 1.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 6 DVVIIGAGPAGMTAALYASR---ANLSVVMLDRGIY-----------GGQMNnTADIEnFPgFKSVLGPdlskdmyesst 71
Cdd:COG1252 3 RIVIVGGGFAGLEAARRLRKklgGDAEVTLIDPNPYhlfqpllpevaAGTLS-PDDIA-IP-LRELLRR----------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 72 qFGAEYAYGSVESIrdDGATKLVKTDMGDEFEAKVVIIGTGSEYKKLGVPGEEDFsgrGVSYCAVCD-----GAFFKGTD 146
Cdd:COG1252 69 -AGVRFIQGEVTGI--DPEARTVTLADGRTLSYDYLVIATGSVTNFFGIPGLAEH---ALPLKTLEDalalrERLLAAFE 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 147 VVVVGGGDS---------------AIEEglYLTQLAS---------KVTVIHRRDQL----------RAQKIIQDRafan 192
Cdd:COG1252 143 RAERRRLLTivvvgggptgvelagELAE--LLRKLLRypgidpdkvRITLVEAGPRIlpglgeklseAAEKELEKR---- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 193 pKMEFVWNSNVTEVVGEgkvtGVKVNNNQTgedsfIEAAGIFIYVGVKPmTAAFADLGI-LDEQGWIPTDDHM-HTKVPG 270
Cdd:COG1252 217 -GVEVHTGTRVTEVDAD----GVTLEDGEE-----IPADTVIWAAGVKA-PPLLADLGLpTDRRGRVLVDPTLqVPGHPN 285
|
....*..
gi 488923010 271 ILAVGDV 277
Cdd:COG1252 286 VFAIGDC 292
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
7-305 |
1.95e-08 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 55.19 E-value: 1.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLDR-----G--IYGgqmnntadIenfPGFKsvlgpdLSKD--MYEsstqfgaey 77
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKGYDVTIFEArdkagGllRYG--------I---PEFR------LPKDivDRE--------- 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 78 aygsVESIRDDGATklVKT-----------DMGDEFEAkvVIIGTG-SEYKKLGVPGEE--------DF----------- 126
Cdd:PRK11749 197 ----VERLLKLGVE--IRTntevgrditldELRAGYDA--VFIGTGaGLPRFLGIPGENlggvysavDFltrvnqavady 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 127 ---SGRGVsycAVCDGaffkgtdvvvvggGDSAIEEGlyltqlASKVTVIHRRDqlRAQKIIQDRAFANPKME---FVWN 200
Cdd:PRK11749 269 dlpVGKRV---VVIGGgnta------mdaARTAKRLG------AESVTIVYRRG--REEMPASEEEVEHAKEEgveFEWL 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 201 SNVTEVVGEGK-VTGVKVNNNQ--------------TGEDSFIEAAGIFIYVG---VKPMTAAFADLGILDEQGWIPTDD 262
Cdd:PRK11749 332 AAPVEILGDEGrVTGVEFVRMElgepdasgrrrvpiEGSEFTLPADLVIKAIGqtpNPLILSTTPGLELNRWGTIIADDE 411
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 488923010 263 HMHTKVPGILAVGD-VRKKDLrqITTAVGDGGVAGQQAYEYIQA 305
Cdd:PRK11749 412 TGRTSLPGVFAGGDiVTGAAT--VVWAVGDGKDAAEAIHEYLEG 453
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
5-119 |
6.76e-08 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 53.35 E-value: 6.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRG--------IYG-GQMNNT---ADIENF-------PGF-KSVL------ 58
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGkklgrkilISGgGRCNVTnlsEEPDNFlsrypgnPKFlKSALsrftpw 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 59 ------------------G---PDLSK-----DMYESS-TQFGAEYAYGS-VESI-RDDGATKLVKTDmGDEFEAKVVII 109
Cdd:pfam03486 81 dfiaffeslgvplkeedhGrlfPDSDKasdivDALLNElKELGVKIRLRTrVLSVeKDDDGRFRVKTG-GEELEADSLVL 159
|
170
....*....|.
gi 488923010 110 GTGS-EYKKLG 119
Cdd:pfam03486 160 ATGGlSWPKTG 170
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
5-55 |
1.08e-07 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 52.32 E-value: 1.08e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRgiyggqmnntadiENFPGFK 55
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEK-------------KSFPRYK 38
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
2-40 |
1.67e-07 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 52.16 E-value: 1.67e-07
10 20 30 40
....*....|....*....|....*....|....*....|
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDR-GIYGG 40
Cdd:COG1233 1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKnDTPGG 40
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
3-36 |
2.00e-07 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 51.83 E-value: 2.00e-07
10 20 30
....*....|....*....|....*....|....
gi 488923010 3 KQYDVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERG 34
|
|
| PRK06116 |
PRK06116 |
glutathione reductase; Validated |
99-277 |
2.27e-07 |
|
glutathione reductase; Validated
Pssm-ID: 235701 [Multi-domain] Cd Length: 450 Bit Score: 51.70 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 99 GDEFEAKVVIIGTGSEYKKLGVPGEEdfsgrgvsYCAVCDGAFF-----KGTdvvvvgggdsAIEEGLY--------LTQ 165
Cdd:PRK06116 127 GERYTADHILIATGGRPSIPDIPGAE--------YGITSDGFFAleelpKRV----------AVVGAGYiavefagvLNG 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 166 LASKVTVIHRRDQ-LRAQ-KIIQD---RAFANPKMEFVWNSNVTEVV--GEGKVTgVKVNNNQTGE-DSFIEAagifiyV 237
Cdd:PRK06116 189 LGSETHLFVRGDApLRGFdPDIREtlvEEMEKKGIRLHTNAVPKAVEknADGSLT-LTLEDGETLTvDCLIWA------I 261
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 488923010 238 GVKPMTAafaDLGI------LDEQGWIPTDDHMHTKVPGILAVGDV 277
Cdd:PRK06116 262 GREPNTD---GLGLenagvkLNEKGYIIVDEYQNTNVPGIYAVGDV 304
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
7-112 |
3.05e-07 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 50.97 E-value: 3.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLDRGiyggqmnntadienfPGFKSVLGPDLSKDMYESSTQFGAEYAYGS-VESI 85
Cdd:COG0446 127 AVVIGGGPIGLELAEALRKRGLKVTLVERA---------------PRLLGVLDPEMAALLEEELREHGVELRLGEtVVAI 191
|
90 100
....*....|....*....|....*..
gi 488923010 86 RDDGATKLVKTDmGDEFEAKVVIIGTG 112
Cdd:COG0446 192 DGDDKVAVTLTD-GEEIPADLVVVAPG 217
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
2-35 |
3.08e-07 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 51.09 E-value: 3.08e-07
10 20 30
....*....|....*....|....*....|....
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVER 34
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
2-40 |
5.11e-07 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 50.60 E-value: 5.11e-07
10 20 30
....*....|....*....|....*....|....*....
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGG 40
Cdd:COG1053 1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRG 39
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
1-40 |
5.71e-07 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 50.80 E-value: 5.71e-07
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 488923010 1 MTKQ-YDVVIIGAGPAGMTAALYASRANLSVVMLDR-GIYGG 40
Cdd:PRK07843 3 MTVQeYDVVVVGSGAAGMVAALTAAHRGLSTVVVEKaPHYGG 44
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
12-112 |
7.17e-07 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 49.58 E-value: 7.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 12 AGPAGMTAALYASRANLSVVMLDRGIY-------GGQMNNTADIENFPGFKSVLGPDLSKDMYESST------------- 71
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFpgdkicgGGLLPRALEELEPLGLDEPLERPVRGARFYSPGgksvelppgrggg 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 488923010 72 ------QF-----------GAEYAYGS-VESIRDDGATKLVKTDMGDEFEAKVVIIGTG 112
Cdd:COG0644 81 yvvdraRFdrwlaeqaeeaGAEVRTGTrVTDVLRDDGRVVVRTGDGEEIRADYVVDADG 139
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
6-42 |
1.22e-06 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 49.53 E-value: 1.22e-06
10 20 30
....*....|....*....|....*....|....*...
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVMLDRGIY-GGQM 42
Cdd:pfam12831 1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGFlGGML 38
|
|
| GIDA |
pfam01134 |
Glucose inhibited division protein A; |
6-129 |
1.40e-06 |
|
Glucose inhibited division protein A;
Pssm-ID: 250388 [Multi-domain] Cd Length: 391 Bit Score: 49.09 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVM----LD-----------RGI-----------YGGQMNNTAD-------IENFP 52
Cdd:pfam01134 1 DVIVIGGGHAGCEAALAAARMGAKVLLithnTDtiaelscnpsiGGIakghlvreidaLGGLMGKAADktgiqfrMLNTS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 53 GFKSVLGPDLS--KDMYESSTQFGAEYAY------GSVESIRD-DGATKLVKTDMGDEFEAKVVIIGTGSEYKKLGVPGE 123
Cdd:pfam01134 81 KGPAVRALRAQvdRDLYSKEMTETLENHPnltliqGEVTDLIPeNGKVKGVVTEDGEEYKAKAVVLATGTFLNGKIHIGL 160
|
....*.
gi 488923010 124 EDFSGR 129
Cdd:pfam01134 161 KCYPAG 166
|
|
| nitri_red_nirB |
TIGR02374 |
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ... |
85-277 |
1.46e-06 |
|
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]
Pssm-ID: 162827 [Multi-domain] Cd Length: 785 Bit Score: 49.44 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 85 IRDDGATKLVKTDMGDEFEAKVVIIGTGSEYKKLGVPGEED---FSGRGVSYCAVCDGAFFKGTDVVVVGGGDSAIEEGL 161
Cdd:TIGR02374 78 IQIDTDQKQVITDAGRTLSYDKLILATGSYPFILPIPGADKkgvYVFRTIEDLDAIMAMAQRFKKAAVIGGGLLGLEAAV 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 162 YLTQLASKVTVIHRRDQLRAQKIIQ------DRAFANPKMEFVWNSNVTEVVGEGKVTGVKVNNNqtgedSFIEAAGIFI 235
Cdd:TIGR02374 158 GLQNLGMDVSVIHHAPGLMAKQLDQtagrllQRELEQKGLTFLLEKDTVEIVGATKADRIRFKDG-----SSLEADLIVM 232
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 488923010 236 YVGVKPMTAAFADLGIlDEQGWIPTDDHMHTKVPGILAVGDV 277
Cdd:TIGR02374 233 AAGIRPNDELAVSAGI-KVNRGIIVNDSMQTSDPDIYAVGEC 273
|
|
| PRK12843 |
PRK12843 |
FAD-dependent oxidoreductase; |
5-40 |
1.48e-06 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 237225 [Multi-domain] Cd Length: 578 Bit Score: 49.35 E-value: 1.48e-06
10 20 30
....*....|....*....|....*....|....*.
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGG 40
Cdd:PRK12843 17 FDVIVIGAGAAGMSAALFAAIAGLKVLLVERTEYVG 52
|
|
| PRK07845 |
PRK07845 |
flavoprotein disulfide reductase; Reviewed |
1-277 |
1.69e-06 |
|
flavoprotein disulfide reductase; Reviewed
Pssm-ID: 236112 [Multi-domain] Cd Length: 466 Bit Score: 49.09 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 1 MTKqydVVIIGAGPAGMTAALYASRANLSVVMLDR-GIYG-----------------GQMNNTADIENFpGFKSVLGPDL 62
Cdd:PRK07845 1 MTR---IVIIGGGPGGYEAALVAAQLGADVTVIERdGLGGaavltdcvpsktliataEVRTELRRAAEL-GIRFIDDGEA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 63 ------------------SKDMYESSTQFGAEYAYGSVESIRDDGATKLVKTDMGD----EFEAKVVIIGTGSEYKKL-- 118
Cdd:PRK07845 77 rvdlpavnarvkalaaaqSADIRARLEREGVRVIAGRGRLIDPGLGPHRVKVTTADggeeTLDADVVLIATGASPRILpt 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 119 GVP-GEEDFS-----------------GRGVSycavcdGAFFkgtdvvvvgggDSAieeglYlTQLASKVTVIHRRDQL- 179
Cdd:PRK07845 157 AEPdGERILTwrqlydldelpehlivvGSGVT------GAEF-----------ASA-----Y-TELGVKVTLVSSRDRVl 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 180 -----RAQKIIQDrAFANPKMEFVWNSNVTEVVGEGkvTGVKVnnnqTGED-SFIEAAGIFIYVGVKPMTAafaDLGI-- 251
Cdd:PRK07845 214 pgedaDAAEVLEE-VFARRGMTVLKRSRAESVERTG--DGVVV----TLTDgRTVEGSHALMAVGSVPNTA---GLGLee 283
|
330 340 350
....*....|....*....|....*....|
gi 488923010 252 ----LDEQGWIPTDDHMHTKVPGILAVGDV 277
Cdd:PRK07845 284 agveLTPSGHITVDRVSRTSVPGIYAAGDC 313
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
6-41 |
4.58e-06 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 47.39 E-value: 4.58e-06
10 20 30
....*....|....*....|....*....|....*.
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQ 41
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS 36
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
2-35 |
9.54e-06 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 46.75 E-value: 9.54e-06
10 20 30
....*....|....*....|....*....|....
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:PRK11259 1 TMRYDVIVIGLGSMGSAAGYYLARRGLRVLGLDR 34
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
2-35 |
1.16e-05 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 46.71 E-value: 1.16e-05
10 20 30
....*....|....*....|....*....|....
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:COG3573 3 AMDADVIVVGAGLAGLVAAAELADAGRRVLLLDQ 36
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
6-36 |
1.39e-05 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 46.13 E-value: 1.39e-05
10 20 30
....*....|....*....|....*....|.
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKG 31
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
14-275 |
1.60e-05 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 45.68 E-value: 1.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 14 PAGMTAALYASRANL-SVVMLDRGiyggqmNNTADIENFP--------GFKS-VLG-PDLSKDMYESSTQF--------G 74
Cdd:pfam13738 1 PAGIGCAIALKKAGLeDYLILEKG------NIGNSFYRYPthmtffspSFTSnGFGiPDLNAISPGTSPAFtfnrehpsG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 75 AEYA----------------YGSVESIRDDGATKLVKTDmGDEFEAKVVIIGTGsEY---KKLGVPGEedfsgrGVSYCA 135
Cdd:pfam13738 75 NEYAeylrrvadhfelpinlFEEVTSVKKEDDGFVVTTS-KGTYQARYVIIATG-EFdfpNKLGVPEL------PKHYSY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 136 VCDGAFFKGTDVVVVGGGDSAIEEGLYLTQLASKVTVIHRRDQLRAQK---------IIQDR---AFANPKMEFVWNSNV 203
Cdd:pfam13738 147 VKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSEWEDRDsdpsyslspDTLNRleeLVKNGKIKAHFNAEV 226
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 488923010 204 TEVvgEGKVTGVKVNnnqTGEDSFIEAAGIFIY-VGVKPmTAAF--ADLGILDEQGWIP-TDDHMHTKVPGILAVG 275
Cdd:pfam13738 227 KEI--TEVDVSYKVH---TEDGRKVTSNDDPILaTGYHP-DLSFlkKGLFELDEDGRPVlTEETESTNVPGLFLAG 296
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
5-36 |
1.69e-05 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 46.00 E-value: 1.69e-05
10 20 30
....*....|....*....|....*....|..
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:PRK05329 3 FDVLVIGGGLAGLTAALAAAEAGKRVALVAKG 34
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
7-124 |
2.27e-05 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 45.87 E-value: 2.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNNTAdIENFPGFKSVLGPDLskdmyESSTQFGAEYAYGSVESiR 86
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYG-IPRFRLPESVIDADI-----APLRAMGAEFRFNTVFG-R 268
|
90 100 110
....*....|....*....|....*....|....*...
gi 488923010 87 DDGATKLVKtdmgdEFEAKVVIIGTgSEYKKLGVPGEE 124
Cdd:PRK12814 269 DITLEELQK-----EFDAVLLAVGA-QKASKMGIPGEE 300
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
2-35 |
2.48e-05 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 45.30 E-value: 2.48e-05
10 20 30
....*....|....*....|....*....|....*..
gi 488923010 2 TKQYDVVIIGAGPAGMTAALYASRANLSVVML---DR 35
Cdd:COG1231 5 ARGKDVVIVGAGLAGLAAARELRKAGLDVTVLearDR 41
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
4-36 |
2.51e-05 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 45.59 E-value: 2.51e-05
10 20 30
....*....|....*....|....*....|...
gi 488923010 4 QYDVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEAS 33
|
|
| GlpB |
COG3075 |
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; |
4-36 |
2.82e-05 |
|
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
Pssm-ID: 442309 Cd Length: 415 Bit Score: 45.17 E-value: 2.82e-05
10 20 30
....*....|....*....|....*....|...
gi 488923010 4 QYDVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:COG3075 2 KFDVVVIGGGLAGLTAAIRAAEAGLRVAIVSAG 34
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
1-35 |
3.25e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 45.27 E-value: 3.25e-05
10 20 30
....*....|....*....|....*....|....*
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:PRK07208 1 MTNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEA 35
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
4-277 |
3.25e-05 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 45.15 E-value: 3.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 4 QYDVVIIGAGPAGMTAALYASRANLSVVMLDRG-IYGGQMNNTADIE---------NFPGFKS------------VLGPD 61
Cdd:PRK05249 5 DYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYrNVGGGCTHTGTIPskalreavlRLIGFNQnplyssyrvklrITFAD 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 62 LSK----------DMYESstQF---GAEYAYG--------SVESIRDDGATKLVKtdmgdefeAKVVIIGTGSE-YKklg 119
Cdd:PRK05249 85 LLAradhvinkqvEVRRG--QYernRVDLIQGrarfvdphTVEVECPDGEVETLT--------ADKIVIATGSRpYR--- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 120 vPGEEDFSGRgvsycAVCD-----------------GAffkgtdvvvvggGDSAIEEGLYLTQLASKVTVIHRRDQLRA- 181
Cdd:PRK05249 152 -PPDVDFDHP-----RIYDsdsilsldhlprsliiyGA------------GVIGCEYASIFAALGVKVTLINTRDRLLSf 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 182 --QKIIQD--RAFANPKMEFVWNSNVTEVVG--EGKVTGVKvNNNQTGEDSFIEAAGifiyvgvkpMTAAFADLGI---- 251
Cdd:PRK05249 214 ldDEISDAlsYHLRDSGVTIRHNEEVEKVEGgdDGVIVHLK-SGKKIKADCLLYANG---------RTGNTDGLNLenag 283
|
330 340
....*....|....*....|....*...
gi 488923010 252 --LDEQGWIPTDDHMHTKVPGILAVGDV 277
Cdd:PRK05249 284 leADSRGQLKVNENYQTAVPHIYAVGDV 311
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
1-35 |
4.30e-05 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 44.51 E-value: 4.30e-05
10 20 30
....*....|....*....|....*....|....*
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:PRK07494 4 EKEHTDIAVIGGGPAGLAAAIALARAGASVALVAP 38
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
1-35 |
4.32e-05 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 44.83 E-value: 4.32e-05
10 20 30
....*....|....*....|....*....|....*
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:PRK06481 58 LKDKYDIVIVGAGGAGMSAAIEAKDAGMNPVILEK 92
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
7-295 |
4.87e-05 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 44.87 E-value: 4.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLDRG-IYGGQMNntadienF--PGFKsvlgpdLSKDMYESSTQ----FGAEYAY 79
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGpKLGGMMR-------YgiPAYR------LPREVLDAEIQrildLGVEVRL 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 80 GSveSIRDDgatkLVKTDMGDEFEAKVVIIGTGSEyKKLGVPGEE-------------------DFSGRGVsycaVCDGA 140
Cdd:PRK12771 207 GV--RVGED----ITLEQLEGEFDAVFVAIGAQLG-KRLPIPGEDaagvldavdflravgegepPFLGKRV----VVIGG 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 141 ffkgtdvvvvggGDSAIEEGLYLTQL-ASKVTVIHRRDqlRAQKIIQDRAFANPKME---FVWNSNVTEV-VGEGKVTGV 215
Cdd:PRK12771 276 ------------GNTAMDAARTARRLgAEEVTIVYRRT--REDMPAHDEEIEEALREgveINWLRTPVEIeGDENGATGL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 216 KV-------------NNNQTGEDSFIEAAGIFIYVGVKPMTAAFADL-GILDEQGWIPTDDH-MHTKVPGILAVGDVRKK 280
Cdd:PRK12771 342 RVitvekmeldedgrPSPVTGEEETLEADLVVLAIGQDIDSAGLESVpGVEVGRGVVQVDPNfMMTGRPGVFAGGDMVPG 421
|
330
....*....|....*
gi 488923010 281 DlRQITTAVGDGGVA 295
Cdd:PRK12771 422 P-RTVTTAIGHGKKA 435
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
200-276 |
5.60e-05 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 44.26 E-value: 5.60e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488923010 200 NSNVTEVVGEGKVTGVKVNNNQtgedsfIEAAGIFIYVGVKPMTAAFADLGI-LDEQGWIPTDDHMHTKVPGILAVGD 276
Cdd:PRK09564 211 NEFVKSLIGEDKVEGVVTDKGE------YEADVVIVATGVKPNTEFLEDTGLkTLKNGAIIVDEYGETSIENIYAAGD 282
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
5-35 |
6.85e-05 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 43.85 E-value: 6.85e-05
10 20 30
....*....|....*....|....*....|.
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:pfam01494 2 TDVLIVGGGPAGLMLALLLARAGVRVVLVER 32
|
|
| PLN02507 |
PLN02507 |
glutathione reductase |
102-277 |
6.90e-05 |
|
glutathione reductase
Pssm-ID: 215281 [Multi-domain] Cd Length: 499 Bit Score: 44.04 E-value: 6.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 102 FEAKVVIIGTGSEYKKLGVPGEE------------DFSGRGVsycaVCDGAFFkgtdvvvvgggdsAIEEGLYLTQLASK 169
Cdd:PLN02507 166 YTAKHILIATGSRAQRPNIPGKElaitsdealsleELPKRAV----VLGGGYI-------------AVEFASIWRGMGAT 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 170 VTVIHRR--------DQLRAqkiIQDRAFANPKMEFVWNSNVTEVVGEGKvtGVKVNNNQTGEdsfIEAAGIFIYVGVKP 241
Cdd:PLN02507 229 VDLFFRKelplrgfdDEMRA---VVARNLEGRGINLHPRTNLTQLTKTEG--GIKVITDHGEE---FVADVVLFATGRAP 300
|
170 180 190
....*....|....*....|....*....|....*....
gi 488923010 242 MTAA--FADLGI-LDEQGWIPTDDHMHTKVPGILAVGDV 277
Cdd:PLN02507 301 NTKRlnLEAVGVeLDKAGAVKVDEYSRTNIPSIWAIGDV 339
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
1-33 |
9.88e-05 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 43.56 E-value: 9.88e-05
10 20 30
....*....|....*....|....*....|...
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRAnLSVVML 33
Cdd:COG0029 1 ERLKTDVLVIGSGIAGLSAALKLAER-GRVTLL 32
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
4-35 |
1.04e-04 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 43.74 E-value: 1.04e-04
10 20 30
....*....|....*....|....*....|..
gi 488923010 4 QYDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:PRK06183 10 DTDVVIVGAGPVGLTLANLLGQYGVRVLVLER 41
|
|
| PLN02463 |
PLN02463 |
lycopene beta cyclase |
5-122 |
1.54e-04 |
|
lycopene beta cyclase
Pssm-ID: 178082 [Multi-domain] Cd Length: 447 Bit Score: 43.16 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNN---------TADIEN-----FPGFKSVLGPDLSKD----- 65
Cdd:PLN02463 29 VDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPSPLSIWPNNygvwvdefeALGLLDcldttWPGAVVYIDDGKKKDldrpy 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488923010 66 -----------MYESSTQFGAEYAYGSVESIRDDGATKLVKTDMGDEFEAKVVIIGTG-----SEYKKLGVPG 122
Cdd:PLN02463 109 grvnrkklkskMLERCIANGVQFHQAKVKKVVHEESKSLVVCDDGVKIQASLVLDATGfsrclVQYDKPFNPG 181
|
|
| PRK08274 |
PRK08274 |
FAD-dependent tricarballylate dehydrogenase TcuA; |
1-36 |
1.89e-04 |
|
FAD-dependent tricarballylate dehydrogenase TcuA;
Pssm-ID: 236214 [Multi-domain] Cd Length: 466 Bit Score: 42.94 E-value: 1.89e-04
10 20 30
....*....|....*....|....*....|....*.
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:PRK08274 1 MASMVDVLVIGGGNAALCAALAAREAGASVLLLEAA 36
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
6-36 |
2.10e-04 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 42.65 E-value: 2.10e-04
10 20 30
....*....|....*....|....*....|.
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:PRK07804 18 DVVVVGSGVAGLTAALAARRAGRRVLVVTKA 48
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
1-36 |
2.30e-04 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 42.51 E-value: 2.30e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 488923010 1 MTKQYDVVIIGAGPAGmtAALyASR----ANLSVVMLDRG 36
Cdd:COG2303 1 MLEEYDYVIVGAGSAG--CVL-ANRlsedAGLRVLLLEAG 37
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
9-42 |
2.93e-04 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 38.28 E-value: 2.93e-04
10 20 30
....*....|....*....|....*....|....*
gi 488923010 9 IIGAGPAGMTAALYASRANLSVVMLDRGIY-GGQM 42
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRlGGNA 35
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
5-35 |
3.03e-04 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 41.85 E-value: 3.03e-04
10 20 30
....*....|....*....|....*....|.
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:PRK09126 4 SDIVVVGAGPAGLSFARSLAGSGLKVTLIER 34
|
|
| Thi4 |
pfam01946 |
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme. |
6-42 |
3.08e-04 |
|
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
Pssm-ID: 460393 Cd Length: 232 Bit Score: 41.30 E-value: 3.08e-04
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 488923010 6 DVVIIGAGPAGMTAALY-ASRANLSVVMLDR------GIYGGQM 42
Cdd:pfam01946 19 DVVIVGAGSSGLTAAYYlAKNRGLKVAIIERsvspggGAWLGGQ 62
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
6-44 |
3.55e-04 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 42.15 E-value: 3.55e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVMLDRGIY-GGQMNN 44
Cdd:COG1148 142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPElGGRAAQ 181
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
6-35 |
5.43e-04 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 41.38 E-value: 5.43e-04
10 20 30
....*....|....*....|....*....|
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVMLDR 35
Cdd:PRK06185 8 DCCIVGGGPAGMMLGLLLARAGVDVTVLEK 37
|
|
| PRK08010 |
PRK08010 |
pyridine nucleotide-disulfide oxidoreductase; Provisional |
4-277 |
7.04e-04 |
|
pyridine nucleotide-disulfide oxidoreductase; Provisional
Pssm-ID: 181196 [Multi-domain] Cd Length: 441 Bit Score: 41.15 E-value: 7.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 4 QYDVVIIGAGPAGMTAALYASRANLSVVMLDR--GIYGGQMNNTA---------DIENFPGF-------KSVLGPDLSKD 65
Cdd:PRK08010 3 KYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQsnAMYGGTCINIGciptktlvhDAQQHTDFvraiqrkNEVVNFLRNKN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 66 MYESSTQFGAEYAYGSVESIrDDGATKLVKTDMGDEFEAKVVIIGTGSEYKKLGVPGEED----FSGRGV-------SYC 134
Cdd:PRK08010 83 FHNLADMPNIDVIDGQAEFI-NNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTtpgvYDSTGLlnlkelpGHL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 135 AVCDGAFFkgtdvvvvgggdsAIEEGLYLTQLASKVTVIH-------RRDQLRAQKIIqdRAFANPKMEFVWNSNVTEVV 207
Cdd:PRK08010 162 GILGGGYI-------------GVEFASMFANFGSKVTILEaaslflpREDRDIADNIA--TILRDQGVDIILNAHVERIS 226
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488923010 208 GEGKVTGVKVNNNQTGEDSFIEAAGifiyvgVKPMTAAF--ADLGI-LDEQGWIPTDDHMHTKVPGILAVGDV 277
Cdd:PRK08010 227 HHENQVQVHSEHAQLAVDALLIASG------RQPATASLhpENAGIaVNERGAIVVDKYLHTTADNIWAMGDV 293
|
|
| PRK13512 |
PRK13512 |
coenzyme A disulfide reductase; Provisional |
237-285 |
8.46e-04 |
|
coenzyme A disulfide reductase; Provisional
Pssm-ID: 184103 [Multi-domain] Cd Length: 438 Bit Score: 40.54 E-value: 8.46e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 488923010 237 VGVKPMTAAFADLGI-LDEQGWIPTDDHMHTKVPGILAVGDVRKKDLRQI 285
Cdd:PRK13512 237 VGTHPNSKFIESSNIkLDDKGFIPVNDKFETNVPNIYAIGDIITSHYRHV 286
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
1-41 |
8.98e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 40.65 E-value: 8.98e-04
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVMLD---RGIYGGQ 41
Cdd:PRK12834 1 MAMDADVIVVGAGLAGLVAAAELADAGKRVLLLDqenEANLGGQ 44
|
|
| Lycopene_cycl |
pfam05834 |
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ... |
6-112 |
1.07e-03 |
|
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.
Pssm-ID: 310433 [Multi-domain] Cd Length: 380 Bit Score: 40.09 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 6 DVVIIGAGPAG--MTAALYASRANLSVVMLDRG---IYGGqmNNT-----ADIEN---------------FPGFKSVLG- 59
Cdd:pfam05834 1 DVVIIGAGPAGlsLAARLAAAKPGLSVVLIEPGpslLRPN--NYVwsdefEDLGAledcvghswpgtrvhFDDGKPILIg 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488923010 60 --------PDLSKDMYESSTQFGAEYAYGSVESIR-DDGATKLVKTDMGDEFEAKVVIIGTG 112
Cdd:pfam05834 79 raygrvssKRLEEEMLQRCVENGVIRLNAKVESVEaDPVGESLVVCEGGRTIRARLVFDARG 140
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
1-35 |
1.58e-03 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 39.74 E-value: 1.58e-03
10 20 30
....*....|....*....|....*....|....*.
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRA-NLSVVMLDR 35
Cdd:COG0579 1 MMEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEK 36
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
6-40 |
1.80e-03 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 39.84 E-value: 1.80e-03
10 20 30
....*....|....*....|....*....|....*.
gi 488923010 6 DVVIIGAGPAGMTAALYASRANLSVVMLD-RGIYGG 40
Cdd:COG3349 5 RVVVVGGGLAGLAAAVELAEAGFRVTLLEaRPRLGG 40
|
|
| PTZ00058 |
PTZ00058 |
glutathione reductase; Provisional |
5-276 |
2.91e-03 |
|
glutathione reductase; Provisional
Pssm-ID: 185420 [Multi-domain] Cd Length: 561 Bit Score: 39.21 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNN----------------------------TADIENFPGFKS 56
Cdd:PTZ00058 49 YDLIVIGGGSGGMAAARRAARNKAKVALVEKDYLGGTCVNvgcvpkkimfnaasihdilensrhygfdTQFSFNLPLLVE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 57 -----------VLGPDLSK---DMYESSTQFGAEYAY---------GSVESIRDDGATKLVKTDMGDE----FEAKVVII 109
Cdd:PTZ00058 129 rrdkyirrlndIYRQNLKKdnvEYFEGKGSLLSENQVlikkvsqvdGEADESDDDEVTIVSAGVSQLDdgqvIEGKNILI 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 110 GTGseykklGVPGEEDFsgRGVSYCAVCDGaFFKGTDVVVVGGGDS---AIEEGLYLTQLASKVTVIHRRDQL--RAQKI 184
Cdd:PTZ00058 209 AVG------NKPIFPDV--KGKEFTISSDD-FFKIKEAKRIGIAGSgyiAVELINVVNRLGAESYIFARGNRLlrKFDET 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 185 IQDRAFANPK---MEFVWNSNVTEVVgEGKVTGVKVNNNQTGedSFIEAAGIFIYVGVKPMTAAFADLGILD--EQGWIP 259
Cdd:PTZ00058 280 IINELENDMKknnINIITHANVEEIE-KVKEKNLTIYLSDGR--KYEHFDYVIYCVGRSPNTEDLNLKALNIktPKGYIK 356
|
330
....*....|....*..
gi 488923010 260 TDDHMHTKVPGILAVGD 276
Cdd:PTZ00058 357 VDDNQRTSVKHIYAVGD 373
|
|
| PRK10015 |
PRK10015 |
oxidoreductase; Provisional |
4-45 |
3.05e-03 |
|
oxidoreductase; Provisional
Pssm-ID: 182194 [Multi-domain] Cd Length: 429 Bit Score: 38.80 E-value: 3.05e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 488923010 4 QYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNNT 45
Cdd:PRK10015 5 KFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMT 46
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
4-39 |
3.63e-03 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 38.86 E-value: 3.63e-03
10 20 30
....*....|....*....|....*....|....*.
gi 488923010 4 QYDVVIIGAGPAGMTAALYASRANLSVVMLDRGIYG 39
Cdd:PRK07803 8 SYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFG 43
|
|
| MnmG |
COG0445 |
tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal ... |
1-33 |
3.96e-03 |
|
tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal structure and biogenesis]; tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440214 [Multi-domain] Cd Length: 626 Bit Score: 38.83 E-value: 3.96e-03
10 20 30
....*....|....*....|....*....|...
gi 488923010 1 MTKQYDVVIIGAGPAGMTAALYASRANLSVVML 33
Cdd:COG0445 3 YPKEYDVIVVGGGHAGCEAALAAARMGAKTLLL 35
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
7-41 |
4.48e-03 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 38.70 E-value: 4.48e-03
10 20 30
....*....|....*....|....*....|....*.
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLD-RGIYGGQ 41
Cdd:PLN02976 696 IIVVGAGPAGLTAARHLQRQGFSVTVLEaRSRIGGR 731
|
|
| TGR |
TIGR01438 |
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ... |
5-300 |
5.10e-03 |
|
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Pssm-ID: 273624 [Multi-domain] Cd Length: 484 Bit Score: 38.29 E-value: 5.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDR----------GIyGGQMNNTADI-ENFPGFKSVLGPDLS---------- 63
Cdd:TIGR01438 3 YDLIVIGGGSGGLAAAKEAAAYGAKVMLLDFvtptplgtrwGI-GGTCVNVGCIpKKLMHQAALLGQALKdsrnygwkve 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 64 -------KDMYES------STQFGAEYAYGSVESIRDDGATKLVKTD-------MGDE--FEAKVVIIGTGSEYKKLGVP 121
Cdd:TIGR01438 82 etvkhdwKRLVEAvqnhigSLNWGYRVALREKKVKYENAYAEFVDKHrikatnkKGKEkiYSAERFLIATGERPRYPGIP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 122 GEEDfsgrgvsYCAVCDGAF-FKGTDVVVVGGGDS--AIEEGLYLTQLASKVTVIHRRDQLRAQkiiqDRAFANPKMEFV 198
Cdd:TIGR01438 162 GAKE-------LCITSDDLFsLPYCPGKTLVVGASyvALECAGFLAGIGLDVTVMVRSILLRGF----DQDCANKVGEHM 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488923010 199 WNSNVT--EVVGEGKVTGV--KVNNNQTGEDSFIEAA--GIFIYVGVKPMTAAF----ADLGILDEQGWIPTDDHMHTKV 268
Cdd:TIGR01438 231 EEHGVKfkRQFVPIKVEQIeaKVLVEFTDSTNGIEEEydTVLLAIGRDACTRKLnlenVGVKINKKTGKIPADEEEQTNV 310
|
330 340 350
....*....|....*....|....*....|..
gi 488923010 269 PGILAVGDVRKKDLRQITTAVGDGGVAGQQAY 300
Cdd:TIGR01438 311 PYIYAVGDILEDKPELTPVAIQAGRLLAQRLF 342
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
5-40 |
5.17e-03 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 38.20 E-value: 5.17e-03
10 20 30
....*....|....*....|....*....|....*..
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDR-GIYGG 40
Cdd:PRK12844 7 YDVVVVGSGGGGMCAALAAADSGLEPLIVEKqDKVGG 43
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
5-36 |
6.25e-03 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 37.94 E-value: 6.25e-03
10 20 30
....*....|....*....|....*....|..
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRG 36
Cdd:PRK07121 21 ADVVVVGFGAAGACAAIEAAAAGARVLVLERA 52
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
7-52 |
7.99e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 37.56 E-value: 7.99e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLDRGIYGGQMNNTADIENFP 52
Cdd:PRK07233 2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASFEFGGLP 47
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
7-34 |
9.07e-03 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 37.54 E-value: 9.07e-03
10 20
....*....|....*....|....*...
gi 488923010 7 VVIIGAGPAGMTAALYASRANLSVVMLD 34
Cdd:PRK08132 26 VVVVGAGPVGLALAIDLAQQGVPVVLLD 53
|
|
| PRK12835 |
PRK12835 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
5-40 |
9.28e-03 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 237221 [Multi-domain] Cd Length: 584 Bit Score: 37.48 E-value: 9.28e-03
10 20 30
....*....|....*....|....*....|....*..
gi 488923010 5 YDVVIIGAGPAGMTAALYASRANLSVVMLDRG-IYGG 40
Cdd:PRK12835 12 VDVLVVGSGGGGMTAALTAAARGLDTLVVEKSaHFGG 48
|
|
| |
