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Conserved domains on  [gi|488666806|ref|WP_002595623|]
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MULTISPECIES: Mor transcription activator family protein [Enterocloster]

Protein Classification

Mor domain-containing protein( domain architecture ID 10009442)

Mor domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Mor COG5566
Transcriptional regulator, middle operon regulator (Mor) family [Transcription, Mobilome: ...
 10-102 1.62e-23

Transcriptional regulator, middle operon regulator (Mor) family [Transcription, Mobilome: prophages, transposons];


:

Pssm-ID: 444308  Cd Length: 120  Bit Score: 86.96  E-value: 1.62e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488666806  10 EDLDEEQRTLAGLIGIEAFRALVRSYNGTPIYIPKIESLEKPVRDELIREEFDGKNYRELALKYGLTETWIRNIVIEKAR 89
Cdd:COG5566   28 EELPGLDEELAELIGLEVALALASYYGGQNIYFPKGDSLRRALRDLEIWREFNGNNHRELARKYGLSERWIYEIVKRVRK 107

                         90
                 ....*....|...
gi 488666806  90 EIKAKPmdgQISL 102
Cdd:COG5566  108 EERARR---QPSL 117
 
Name Accession Description Interval E-value
Mor COG5566
Transcriptional regulator, middle operon regulator (Mor) family [Transcription, Mobilome: ...
 10-102 1.62e-23

Transcriptional regulator, middle operon regulator (Mor) family [Transcription, Mobilome: prophages, transposons];


Pssm-ID: 444308  Cd Length: 120  Bit Score: 86.96  E-value: 1.62e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488666806  10 EDLDEEQRTLAGLIGIEAFRALVRSYNGTPIYIPKIESLEKPVRDELIREEFDGKNYRELALKYGLTETWIRNIVIEKAR 89
Cdd:COG5566   28 EELPGLDEELAELIGLEVALALASYYGGQNIYFPKGDSLRRALRDLEIWREFNGNNHRELARKYGLSERWIYEIVKRVRK 107

                         90
                 ....*....|...
gi 488666806  90 EIKAKPmdgQISL 102
Cdd:COG5566  108 EERARR---QPSL 117
Mor pfam08765
Mor transcription activator family; Mor (Middle operon regulator) is a sequence specific DNA ...
 2-97 4.92e-17

Mor transcription activator family; Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.


Pssm-ID: 400902  Cd Length: 107  Bit Score: 70.01  E-value: 4.92e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488666806    2 DLLDKVQME----DLDEEqrtLAGLIGIEAFRALVRSYNGTPIYIPKIESLEKPVRDELIREEFDGKNYRELALKYGLTE 77
Cdd:pfam08765   9 DLADHVAAElkrlGIDNE---LAEQIGIEVADALAAHWGGQQIYIPRGQSLRLALRDLEIYNEFNGNNHAELARKYGVSE 85

                          90       100
                  ....*....|....*....|.
gi 488666806   78 TWIRNIVIE-KAREIKAKPMD 97
Cdd:pfam08765  86 QWIYKIIKRvRKLEIARRQPD 106
 
Name Accession Description Interval E-value
Mor COG5566
Transcriptional regulator, middle operon regulator (Mor) family [Transcription, Mobilome: ...
 10-102 1.62e-23

Transcriptional regulator, middle operon regulator (Mor) family [Transcription, Mobilome: prophages, transposons];


Pssm-ID: 444308  Cd Length: 120  Bit Score: 86.96  E-value: 1.62e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488666806  10 EDLDEEQRTLAGLIGIEAFRALVRSYNGTPIYIPKIESLEKPVRDELIREEFDGKNYRELALKYGLTETWIRNIVIEKAR 89
Cdd:COG5566   28 EELPGLDEELAELIGLEVALALASYYGGQNIYFPKGDSLRRALRDLEIWREFNGNNHRELARKYGLSERWIYEIVKRVRK 107

                         90
                 ....*....|...
gi 488666806  90 EIKAKPmdgQISL 102
Cdd:COG5566  108 EERARR---QPSL 117
Mor pfam08765
Mor transcription activator family; Mor (Middle operon regulator) is a sequence specific DNA ...
 2-97 4.92e-17

Mor transcription activator family; Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.


Pssm-ID: 400902  Cd Length: 107  Bit Score: 70.01  E-value: 4.92e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488666806    2 DLLDKVQME----DLDEEqrtLAGLIGIEAFRALVRSYNGTPIYIPKIESLEKPVRDELIREEFDGKNYRELALKYGLTE 77
Cdd:pfam08765   9 DLADHVAAElkrlGIDNE---LAEQIGIEVADALAAHWGGQQIYIPRGQSLRLALRDLEIYNEFNGNNHAELARKYGVSE 85

                          90       100
                  ....*....|....*....|.
gi 488666806   78 TWIRNIVIE-KAREIKAKPMD 97
Cdd:pfam08765  86 QWIYKIIKRvRKLEIARRQPD 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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