MULTISPECIES: hypothetical protein [Bacteria]
Protein Classification
transposon-transfer assisting family protein( domain architecture ID 10624705)
transposon-transfer assisting family protein similar to Clostridium difficile CD1104B, which is encoded in transposon CTn4 and may participate in interactions with proteins required for the transfer of transposons between different bacterial species
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| TTRAP | pfam14203 | Putative transposon-transfer assisting protein; TTRAP is a family of small bacterial proteins ... |
4-64 | 7.50e-21 | ||
Putative transposon-transfer assisting protein; TTRAP is a family of small bacterial proteins largely from Clostrium difficile. From comparative and other structural studies of the PDB:2L7K, UniProtKB:Q18AW3, it has been suggested that this family is required for interacting with other proteins in order to facilitate the transfer of the transposon CTn4 between different bacterial species. PDB:2L7K comprises an alpha-helical fold of four alpha-helices leading to the production of two clefts, the larger of which displays two highly conserved residues in close proximity, Glu-8 and Lys-48. The gene concerned is part of an operon within transposon CTn4, and is expressed alongside a putative DNA primase, a DNA topoisomerase and conjugal transfer proteins. : Pssm-ID: 433771 Cd Length: 62 Bit Score: 76.89 E-value: 7.50e-21
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| Name | Accession | Description | Interval | E-value | ||
| TTRAP | pfam14203 | Putative transposon-transfer assisting protein; TTRAP is a family of small bacterial proteins ... |
4-64 | 7.50e-21 | ||
Putative transposon-transfer assisting protein; TTRAP is a family of small bacterial proteins largely from Clostrium difficile. From comparative and other structural studies of the PDB:2L7K, UniProtKB:Q18AW3, it has been suggested that this family is required for interacting with other proteins in order to facilitate the transfer of the transposon CTn4 between different bacterial species. PDB:2L7K comprises an alpha-helical fold of four alpha-helices leading to the production of two clefts, the larger of which displays two highly conserved residues in close proximity, Glu-8 and Lys-48. The gene concerned is part of an operon within transposon CTn4, and is expressed alongside a putative DNA primase, a DNA topoisomerase and conjugal transfer proteins. Pssm-ID: 433771 Cd Length: 62 Bit Score: 76.89 E-value: 7.50e-21
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| Name | Accession | Description | Interval | E-value | ||
| TTRAP | pfam14203 | Putative transposon-transfer assisting protein; TTRAP is a family of small bacterial proteins ... |
4-64 | 7.50e-21 | ||
Putative transposon-transfer assisting protein; TTRAP is a family of small bacterial proteins largely from Clostrium difficile. From comparative and other structural studies of the PDB:2L7K, UniProtKB:Q18AW3, it has been suggested that this family is required for interacting with other proteins in order to facilitate the transfer of the transposon CTn4 between different bacterial species. PDB:2L7K comprises an alpha-helical fold of four alpha-helices leading to the production of two clefts, the larger of which displays two highly conserved residues in close proximity, Glu-8 and Lys-48. The gene concerned is part of an operon within transposon CTn4, and is expressed alongside a putative DNA primase, a DNA topoisomerase and conjugal transfer proteins. Pssm-ID: 433771 Cd Length: 62 Bit Score: 76.89 E-value: 7.50e-21
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