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Conserved domains on  [gi|488373603|ref|WP_002442988|]
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GhoT/OrtT family toxin [Shimwellia blattae]

Protein Classification

Toxin_GhoT_OrtT domain-containing protein( domain architecture ID 10566655)

Toxin_GhoT_OrtT domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Toxin_GhoT_OrtT pfam10753
Toxin GhoT_OrtT; GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is ...
 4-57 4.15e-10

Toxin GhoT_OrtT; GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.


:

Pssm-ID: 431472  Cd Length: 55  Bit Score: 48.88  E-value: 4.15e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 488373603   4 YYKMLVFYAVMAVIFTIITWFLTKE-TLAIRLLAAFLVGATWPFSFPVALLFSLF 57
Cdd:pfam10753  1 WELILVFYAIGLVISFLITFFLSKDpSLFIRLLAALLIGLTWPMSFPVVLLFSLF 55
 
Name Accession Description Interval E-value
Toxin_GhoT_OrtT pfam10753
Toxin GhoT_OrtT; GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is ...
 4-57 4.15e-10

Toxin GhoT_OrtT; GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.


Pssm-ID: 431472  Cd Length: 55  Bit Score: 48.88  E-value: 4.15e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 488373603   4 YYKMLVFYAVMAVIFTIITWFLTKE-TLAIRLLAAFLVGATWPFSFPVALLFSLF 57
Cdd:pfam10753  1 WELILVFYAIGLVISFLITFFLSKDpSLFIRLLAALLIGLTWPMSFPVVLLFSLF 55
 
Name Accession Description Interval E-value
Toxin_GhoT_OrtT pfam10753
Toxin GhoT_OrtT; GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is ...
 4-57 4.15e-10

Toxin GhoT_OrtT; GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.


Pssm-ID: 431472  Cd Length: 55  Bit Score: 48.88  E-value: 4.15e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 488373603   4 YYKMLVFYAVMAVIFTIITWFLTKE-TLAIRLLAAFLVGATWPFSFPVALLFSLF 57
Cdd:pfam10753  1 WELILVFYAIGLVISFLITFFLSKDpSLFIRLLAALLIGLTWPMSFPVVLLFSLF 55
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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