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Conserved domains on  [gi|488140879|ref|WP_002212087|]
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MULTISPECIES: maltose ABC transporter permease MalG [Yersinia pseudotuberculosis complex]

Protein Classification

maltose ABC transporter permease MalG( domain architecture ID 10793519)

maltose ABC transporter permease MalG is part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


:

Pssm-ID: 182891  Cd Length: 296  Bit Score: 568.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   1 MAMVQPKSQRLRLLGTHFLMLCFIALIMFPLLMVIAISLRPGNFATGSLIPDQISWEHWKLALGMSVTHADGSVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  81 VMLWLWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYMPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 161 GVIFAYMGGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 488140879 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITTVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
 
Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 568.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   1 MAMVQPKSQRLRLLGTHFLMLCFIALIMFPLLMVIAISLRPGNFATGSLIPDQISWEHWKLALGMSVTHADGSVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  81 VMLWLWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYMPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 161 GVIFAYMGGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 488140879 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITTVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 3-296 7.32e-116

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 334.81  E-value: 7.32e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   3 MVQPKSQRLRLLGTHFLMLCFIALIMFPLLMVIAISLRPGNF-ATGSLIPDQISWEHWKLALGmsvthadgsvtppPFPV 81
Cdd:COG3833    5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  82 MLWLWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQympfigLNTHGG 161
Cdd:COG3833   72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLG 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 162 VIFAYMGG-IALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:COG3833  146 LILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 488140879 241 NSYTLAVGMQQYLNPQ-NYLWGDFAAAAVLSAIPITTVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG3833  226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 85-274 9.50e-19

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 81.94  E-value: 9.50e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYMPFIGLnTHGGVIF 164
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 165 AYMGGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYT 244
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|
gi 488140879 245 LAVGMQQYLNPQNYLWGDFAAAAVLSAIPI 274
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 85-279 6.48e-08

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 52.74  E-value: 6.48e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGM-LIFQMFPAV--LSLVALYALFDRIGQYMPFIGLNthgg 161
Cdd:TIGR00969  62 YNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIdLPFALSPVVagLTLALLYGSNGWLGSWLASFGIQ---- 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  162 VIFAYMG--------GIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:TIGR00969 138 IIFTWPGmalamifvSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAV 217

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 488140879  234 SLLLRDVNSYTLAVGMQQYLNPQNYLW-GDFAAAAVLSAIPITTVFL 279
Cdd:TIGR00969 218 VVVSGNIPGKTLTLPLLIEERLEQYDYpGAYVIAAVLLLVSLVTLFL 264
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 112-286 5.95e-07

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 48.83  E-value: 5.95e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  112 RMRFRGKSALLKGMLIFQMFPAVLSLVALYALFdrigqYMPFIGLNTHGGVIFAYMGGIALHVWTIKGYFETIDNSLEEA 191
Cdd:pfam00528  11 RRGRRLDRLLRPLIDLLQALPSFVLAILLVVIA-----ILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  192 AALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGdfAAAAVLSA 271
Cdd:pfam00528  86 ARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGP--VLAAALIL 163

                         170
                  ....*....|....*
gi 488140879  272 IPITTVFLLAQRWLV 286
Cdd:pfam00528 164 LLLNLLVDILQRLLD 178
 
Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 568.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   1 MAMVQPKSQRLRLLGTHFLMLCFIALIMFPLLMVIAISLRPGNFATGSLIPDQISWEHWKLALGMSVTHADGSVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  81 VMLWLWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYMPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 161 GVIFAYMGGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 488140879 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITTVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 3-296 7.32e-116

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 334.81  E-value: 7.32e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   3 MVQPKSQRLRLLGTHFLMLCFIALIMFPLLMVIAISLRPGNF-ATGSLIPDQISWEHWKLALGmsvthadgsvtppPFPV 81
Cdd:COG3833    5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  82 MLWLWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQympfigLNTHGG 161
Cdd:COG3833   72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLG 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 162 VIFAYMGG-IALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:COG3833  146 LILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 488140879 241 NSYTLAVGMQQYLNPQ-NYLWGDFAAAAVLSAIPITTVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG3833  226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 6-296 7.26e-69

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 215.34  E-value: 7.26e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   6 PKSQRLRLLGTHFLMLCFIALIMFPLLMVIAISLRPGN--FATG-SLIPDQISWEHWKLALGMSvthadgsvtpppfPVM 82
Cdd:COG0395    7 RRRRRLGRILLYLLLILLALLFLFPLYWMVVTSFKPPAeiFSGPpSLLPSEFTLENYRAAFTDG-------------PFG 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  83 LWLWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQympfigLNTHGGV 162
Cdd:COG0395   74 RYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGL------LNTYWGL 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 163 IFAYMG-GIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVN 241
Cdd:COG0395  148 ILPYLAfGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTSPD 227

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 488140879 242 SYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITTVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG0395  228 LRTLPVGLASFQGQYGTDWGLLMAAAVIATLPVLILFLFLQRYFVRGLTAGAVKG 282
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 8-285 1.86e-27

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 107.12  E-value: 1.86e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   8 SQRLRLLGTHFLMLCFIALIMFPLLMVIAISLRPGNFATgsLIPDQISWEHWKLALGMSvthadgsvtpppfPVMLWLWN 87
Cdd:COG1177    1 SSRLGRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLT--FPPEGFTLRWYAELFSDP-------------RLLDALLN 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  88 SIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYmpfiglNTHGGVIFAY- 166
Cdd:COG1177   66 SLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLS------GGLWGLILAHv 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 167 MGGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVaSLLLRDVNSYTLA 246
Cdd:COG1177  140 VFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVI-TLFLAGPGVTTLP 218

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 488140879 247 VGMQQYLNPQNYLWGdfAAAAVLSAIPITTVFLLAQRWL 285
Cdd:COG1177  219 VYIYSMIRRGISPEI--NALSTLLILLSLLLLLLAERLR 255
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
10-285 1.21e-22

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 97.54  E-value: 1.21e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  10 RLRLLGTHFLMLCFIALIMFPLLMVIAISLRPGnfatgslIPDQISWEHWKLALGMSVThadgsvtpppfpvMLWLWNSI 89
Cdd:COG1178  285 RWRWLALALCLLLVLLGLLLPLLALLLWSLTKA-------LDDNLTLDNYRFVLLDPSL-------------LRALLNSL 344

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  90 KIALITAMGIVALSTTCAYAFARMRFRGKSALLK-GMLIFQMFPAVLSLVALYALfdriGQYMPFIGLNTHGGVIFAYMG 168
Cdd:COG1178  345 LLALLAALLAVLLALLLAYLVRRRRGRLARLLDRlAMLPYAVPGIVLGLGLLLLF----NRPLPLLLYGTLAILVLAYVV 420

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 169 -GIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPvASLLLRDVNSYTLAV 247
Cdd:COG1178  421 rFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELS-ATLLLRPPGFETLAV 499

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 488140879 248 GMQQYLnpQNYLWGDFAAAAVLSAIPITTVFLLAQRWL 285
Cdd:COG1178  500 LIYQLA--SSGRYGEAAALALLLVLVSLLPVLLLERLL 535
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
85-296 3.74e-20

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 90.22  E-value: 3.74e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQY---------MPFIG 155
Cdd:COG1178   56 LGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLntllralfgLEPPD 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 156 LNTHGGVIFAY-MGGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVAS 234
Cdd:COG1178  136 IYGLGGIILVLvLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPL 215

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488140879 235 LLLRDVNsyTLAVGMQQYLNPQnylwGDFAAAAVLSAI--PITTVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG1178  216 VLGGGYT--TLTTAIYQAWLGD----FDLGAAAALALVllLLVLLLLLLERRLRRRRRYATVGG 273
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 85-274 9.50e-19

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 81.94  E-value: 9.50e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYMPFIGLnTHGGVIF 164
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 165 AYMGGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYT 244
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|
gi 488140879 245 LAVGMQQYLNPQNYLWGDFAAAAVLSAIPI 274
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 23-293 7.73e-17

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 78.65  E-value: 7.73e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  23 FIALIMFPLLMVIAISLRPGNFATGslIPDQISWEHWKLALGMSVTHADgsvtpppfpvmlwLWNSIKIALITAMGIVAL 102
Cdd:COG1176   22 LLLFFVLPLLLLLVYSFTTRDPYGG--VVPGFTLENYARLFTDPLYLKV-------------LLRTLWIALLTTLICLLL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 103 STTCAYAFARMRFRGKSALLkGMLIFQMFpaVLSLVALYA---------LFDRIGQYMPFIG-----LNTHGGVIFAYmg 168
Cdd:COG1176   87 GYPIAYFLARAPPRWRNLLL-LLVILPFW--TSFLVRTYAwivllgrngLLNSLLLALGLIDeplrlLYTEFAVVIGL-- 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 169 giaLHVW------TIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLlrdVNS 242
Cdd:COG1176  162 ---VYVYlpfmvlPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALL---GGG 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 488140879 243 YTLAVGM---QQYLNPQNylWGdFAAAAVLSAIPITTVFLLAQRWLVGGLTAGG 293
Cdd:COG1176  236 KVLMIGNliyQQFLSALN--WP-LAAALAVVLLLIVLLVLLLYLRLLRRRRLLG 286
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 85-229 1.71e-15

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 74.79  E-value: 1.71e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSaLLKGM--LIFQMFPAV--LSLVALYALFDRIGQYMPFIGLN--- 157
Cdd:COG0555   56 LKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKR-LVDALvdLPFALPTAVagIALLLLFGPNGWLGQLLAPLGIKvaf 134

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488140879 158 THGGVIFAyMGGIAL--HVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:COG0555  135 TPLGIVLA-QTFVSLpfVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGE 207
PRK10973 PRK10973
sn-glycerol-3-phosphate ABC transporter permease UgpE;
17-289 9.17e-14

sn-glycerol-3-phosphate ABC transporter permease UgpE;


Pssm-ID: 182875 [Multi-domain]  Cd Length: 281  Bit Score: 69.76  E-value: 9.17e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  17 HFLMLCFIALIMFPLLMV-IAISLRPGNFATG--SLIPDQISWEHWKlalgmSVTHADGSVTPPPFPVMLWlwNSIKIAL 93
Cdd:PRK10973  13 HTMLILGIAVILFPLYVAfVAATLDKQAVFAVpmTLIPGTHLLENIA-----NIWVNGVGNNSAPFGRMLL--NSFVMAF 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  94 ITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQympfigLNTHGGVIFAYMGGiALH 173
Cdd:PRK10973  86 SITVGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKM------LDSYAGLTLPLMAS-ATA 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 174 VWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYL 253
Cdd:PRK10973 159 TFLFRQFFMTLPDELVEAARIDGASPMRFFWDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIITDVSLGTAVAGIKGMI 238

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 488140879 254 NPQNYL--WGDFAAAAVLSAIPITTVFLLAQRWLVGGL 289
Cdd:PRK10973 239 ATGEGTteWNQVMAAMLLTLIPPVVIVLAMQRAFVRGL 276
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 86-234 1.53e-09

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 57.30  E-value: 1.53e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  86 WNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYMPFIGLnthggvIFA 165
Cdd:PRK09500  60 QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSL------LFA 133

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 166 YMG-GIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVAS 234
Cdd:PRK09500 134 HITfCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSS 203
modB PRK09421
molybdate ABC transporter permease subunit;
88-229 1.83e-09

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 56.85  E-value: 1.83e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  88 SIKIALITAMGIVALSTTCAYAFARMRFRGKSaLLKGMLIFQM-FPAVLSLVALYALFDRIGqympFIG--LNTHGGVIF 164
Cdd:PRK09421  14 SLKVSSVAVLFSLPFGILVAWLLARCRFPGKS-LLDSLLHLPLvLPPVVTGYLLLISMGRRG----FIGqwLYEWFGISF 88

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488140879 165 AY----------MGGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:PRK09421  89 AFswrgaalaaaVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
85-226 6.56e-09

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 55.91  E-value: 6.56e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  85 LWNSIKIALITAMGIVALSTTCAYAFARmRFRGKSALLKGMLIFQMFPAVLSLVALYALFDR----IGQYMPFIGLNTH- 159
Cdd:COG1175   78 LGNTLLFTVVSVPLQLVLGLLLALLLNR-KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPdyglLNALLGALGLEPIn 156

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 488140879 160 --GGVIFAYMGGIALHVWTIKGYF--------ETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAA 226
Cdd:COG1175  157 wlGDPSLALPAVIIVTVWKGTGFNmliflaglQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGA 233
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 85-279 6.48e-08

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 52.74  E-value: 6.48e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGM-LIFQMFPAV--LSLVALYALFDRIGQYMPFIGLNthgg 161
Cdd:TIGR00969  62 YNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIdLPFALSPVVagLTLALLYGSNGWLGSWLASFGIQ---- 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  162 VIFAYMG--------GIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:TIGR00969 138 IIFTWPGmalamifvSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAV 217

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 488140879  234 SLLLRDVNSYTLAVGMQQYLNPQNYLW-GDFAAAAVLSAIPITTVFL 279
Cdd:TIGR00969 218 VVVSGNIPGKTLTLPLLIEERLEQYDYpGAYVIAAVLLLVSLVTLFL 264
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 112-286 5.95e-07

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 48.83  E-value: 5.95e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  112 RMRFRGKSALLKGMLIFQMFPAVLSLVALYALFdrigqYMPFIGLNTHGGVIFAYMGGIALHVWTIKGYFETIDNSLEEA 191
Cdd:pfam00528  11 RRGRRLDRLLRPLIDLLQALPSFVLAILLVVIA-----ILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  192 AALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGdfAAAAVLSA 271
Cdd:pfam00528  86 ARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGP--VLAAALIL 163

                         170
                  ....*....|....*
gi 488140879  272 IPITTVFLLAQRWLV 286
Cdd:pfam00528 164 LLLNLLVDILQRLLD 178
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 85-229 8.38e-07

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 49.25  E-value: 8.38e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSaLLKGM--LIFQMFPAV--LSLVALYALFDRIGQYMPFIGLN--- 157
Cdd:TIGR02139  52 YKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKR-IVDALvdLPFALPTAVagIALATLYSPNGWIGSFLAPLGIKiaf 130

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488140879  158 THGGVIFAYM-GGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:TIGR02139 131 TPLGIVIALVfVSLPFVVRTVQPVLEEIEKELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGE 203
cysT CHL00187
sulfate transport protein; Provisional
 80-229 1.05e-06

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 48.86  E-value: 1.05e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  80 PVMLWLWN-SIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGM-LIFQMFPAV--LSLVALYALFDRIGQYMPFIG 155
Cdd:CHL00187  51 PIALSAYSlTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVdLPFALPTSVagLTLATVYGDNGWIGHLLSHLG 130

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488140879 156 LN---THGGVIFAYM-GGIALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:CHL00187 131 IQivfTKLGVLLAMIfVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGE 208
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 85-280 3.44e-06

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 48.14  E-value: 3.44e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879   85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYMPFIGLNTHGGVIF 164
Cdd:TIGR03262  56 LGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSIYGFWG 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  165 AYMGGI------ALHVWTIKgyFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLR 238
Cdd:TIGR03262 136 IVIGEVfytfphALMILVTA--LSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGG 213

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 488140879  239 DVNSYTLAVgMQQYLNPQNYLWGdfAAAAVLSAIPITTVFLL 280
Cdd:TIGR03262 214 DYNVLATDI-YKQVIGQQNFPMG--AVVGVLLLLPALLAFGI 252
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
85-279 1.35e-04

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 42.82  E-value: 1.35e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  85 LWNSIKIALITAMGIVALSTTCAYAFARMRFRGKSALLKGMLI-FQMFPAVLSLvaLYALFdrIGQYMPFIG-LNTHG-G 161
Cdd:PRK11602  66 IWLTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGL--VYLLF--YGSNGPLGGwLDEHNlQ 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 162 VIFAYMGGIALHVWTIKGYF--ETIDNSL------EEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:PRK11602 142 LMFSWPGMVLVTIFVTCPFVvrELVPVMLsqgsqeDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAV 221

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 488140879 234 SLLLRDVNSYTLAVGMQQYLNPQNY-LWGDFAAAAVLSAIPITTVFL 279
Cdd:PRK11602 222 SVVSGSIRGETLSLPLQIELLEQDYnTVGSFTAAALLTLMAIITLFL 268
LplB COG4209
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and ...
 183-222 8.69e-04

ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 443357 [Multi-domain]  Cd Length: 316  Bit Score: 40.46  E-value: 8.69e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 488140879 183 TIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILS 222
Cdd:COG4209  202 GIDPELYEAAAIDGAGRWQQIWHITLPGIRPTIVILLILN 241
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
107-280 1.15e-03

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 39.74  E-value: 1.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 107 AYAFARMRFRGKSaLLKGM--LIFQMFPAV--LSLVALYALFDRIGQYMPFIGL---NTHGGVIFAY-MGGIALHVWTIK 178
Cdd:PRK10971  82 AWILTRYRFPGRT-LLDALmdLPFALPTAVagLTLASLFSVNGWYGEWLAKFDIkvtYTWLGIAVAMaFTSIPFVVRTVQ 160

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879 179 GYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNY 258
Cdd:PRK10971 161 PVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF 240

                        170       180
                 ....*....|....*....|...
gi 488140879 259 lwgDF-AAAAVLSAIPITTVFLL 280
Cdd:PRK10971 241 ---DYpAASAIASVILAASLLLL 260
malF PRK10999
maltose ABC transporter permease MalF;
179-223 3.65e-03

maltose ABC transporter permease MalF;


Pssm-ID: 236816 [Multi-domain]  Cd Length: 520  Bit Score: 38.79  E-value: 3.65e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 488140879 179 GYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSF 223
Cdd:PRK10999 396 GLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASF 440
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 16-236 7.14e-03

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 37.52  E-value: 7.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  16 THFLMLCFIALIMfPLLMVIAISLRPGNFATgslipdqiSWEHWKLALGMSVTHADGSVTPppfpVMLwlwnSIKIALIT 95
Cdd:PRK10592  13 IVILVLGFTFLYA-PMLMLVIYSFNSSKLVT--------VWAGWSTRWYGELFRDDAMMSA----VGL----SLTIAACA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488140879  96 AMGIVALSTTCAYAFARM-RFRGKSALLKGMLIFQMFPAVLSLVALYALFDRIGQYmpfIGLNTHGGVIFAYMGGI---- 170
Cdd:PRK10592  76 ATAAAILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHA---IGWPADRGMLTIWLAHVtfct 152

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 488140879 171 ALHVWTIKGYFETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLL 236
Cdd:PRK10592 153 AYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV 218
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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