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Conserved domains on  [gi|488053596|ref|WP_002124993|]
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MULTISPECIES: YesK-like family protein [Bacillus]

Protein Classification

YesK-like family protein( domain architecture ID 10624431)

YesK-like family protein similar to Bacillus subtilis uncharacterized protein YesK

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YesK pfam14150
YesK-like protein; The YesK-like protein family includes the B. subtilis YesK protein, which ...
 10-90 3.83e-17

YesK-like protein; The YesK-like protein family includes the B. subtilis YesK protein, which is functionally uncharacterized. Its expression is regulated by the sporulation-specific sigma factor sigma-E. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.


:

Pssm-ID: 372929  Cd Length: 81  Bit Score: 69.31  E-value: 3.83e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488053596  10 FYIIGGVTVLLVFFMSYLLKKRFPDKQFDIIFALSLVLLCLAFFPVTMIAIGGWEGMGYGFICFFVLIGTLIGMVAHQLV 89
Cdd:pfam14150  1 FFIIGIITAILFFALSYLLKKRFPPRQYGIILLLILILLSLAQVLYSLFFVGGWEGMGLGILGFSVFIGTILGYIIHALI 80


                 .
gi 488053596  90 K 90
Cdd:pfam14150 81 R 81
 
Name Accession Description Interval E-value
YesK pfam14150
YesK-like protein; The YesK-like protein family includes the B. subtilis YesK protein, which ...
 10-90 3.83e-17

YesK-like protein; The YesK-like protein family includes the B. subtilis YesK protein, which is functionally uncharacterized. Its expression is regulated by the sporulation-specific sigma factor sigma-E. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.


Pssm-ID: 372929  Cd Length: 81  Bit Score: 69.31  E-value: 3.83e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488053596  10 FYIIGGVTVLLVFFMSYLLKKRFPDKQFDIIFALSLVLLCLAFFPVTMIAIGGWEGMGYGFICFFVLIGTLIGMVAHQLV 89
Cdd:pfam14150  1 FFIIGIITAILFFALSYLLKKRFPPRQYGIILLLILILLSLAQVLYSLFFVGGWEGMGLGILGFSVFIGTILGYIIHALI 80


                 .
gi 488053596  90 K 90
Cdd:pfam14150 81 R 81
 
Name Accession Description Interval E-value
YesK pfam14150
YesK-like protein; The YesK-like protein family includes the B. subtilis YesK protein, which ...
 10-90 3.83e-17

YesK-like protein; The YesK-like protein family includes the B. subtilis YesK protein, which is functionally uncharacterized. Its expression is regulated by the sporulation-specific sigma factor sigma-E. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.


Pssm-ID: 372929  Cd Length: 81  Bit Score: 69.31  E-value: 3.83e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488053596  10 FYIIGGVTVLLVFFMSYLLKKRFPDKQFDIIFALSLVLLCLAFFPVTMIAIGGWEGMGYGFICFFVLIGTLIGMVAHQLV 89
Cdd:pfam14150  1 FFIIGIITAILFFALSYLLKKRFPPRQYGIILLLILILLSLAQVLYSLFFVGGWEGMGLGILGFSVFIGTILGYIIHALI 80


                 .
gi 488053596  90 K 90
Cdd:pfam14150 81 R 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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