YncE family protein [Escherichia coli]
YncE family protein( domain architecture ID 11465355)
YncE family protein contains repeats resembling the NHL (NCL-1, HT2A and LIN-41) and YVTN-type repeats, similar to DNA-binding beta-propeller protein YncE and Bacillus subtilis uncharacterized protein YwhL
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
149-360 | 1.81e-15 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; : Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 75.12 E-value: 1.81e-15
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YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
47-221 | 6.67e-13 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; : Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 67.80 E-value: 6.67e-13
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Name | Accession | Description | Interval | E-value | ||||
YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
149-360 | 1.81e-15 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 75.12 E-value: 1.81e-15
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YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
47-221 | 6.67e-13 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 67.80 E-value: 6.67e-13
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assembly_YfgL | TIGR03300 | outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a ... |
201-297 | 9.56e-04 | ||||
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking] Pssm-ID: 274511 [Multi-domain] Cd Length: 377 Bit Score: 41.07 E-value: 9.56e-04
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Lactonase | pfam10282 | Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases ... |
276-358 | 6.32e-03 | ||||
Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold. Pssm-ID: 431196 [Multi-domain] Cd Length: 340 Bit Score: 38.36 E-value: 6.32e-03
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Name | Accession | Description | Interval | E-value | ||||
YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
149-360 | 1.81e-15 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 75.12 E-value: 1.81e-15
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YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
168-332 | 2.85e-15 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 74.73 E-value: 2.85e-15
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YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
47-221 | 6.67e-13 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 67.80 E-value: 6.67e-13
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YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
12-106 | 1.04e-06 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 49.31 E-value: 1.04e-06
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YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
246-367 | 1.53e-04 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 42.76 E-value: 1.53e-04
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assembly_YfgL | TIGR03300 | outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a ... |
201-297 | 9.56e-04 | ||||
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking] Pssm-ID: 274511 [Multi-domain] Cd Length: 377 Bit Score: 41.07 E-value: 9.56e-04
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YncE | COG3391 | DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
24-98 | 1.09e-03 | ||||
DNA-binding beta-propeller fold protein YncE [General function prediction only]; Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 40.06 E-value: 1.09e-03
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PQQ | COG1520 | Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell ... |
201-315 | 1.19e-03 | ||||
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 441129 [Multi-domain] Cd Length: 370 Bit Score: 40.57 E-value: 1.19e-03
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Pgl | COG2706 | 6-phosphogluconolactonase, cycloisomerase 2 family [Carbohydrate transport and metabolism]; |
269-358 | 1.47e-03 | ||||
6-phosphogluconolactonase, cycloisomerase 2 family [Carbohydrate transport and metabolism]; Pssm-ID: 442025 [Multi-domain] Cd Length: 352 Bit Score: 40.27 E-value: 1.47e-03
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Lactonase | pfam10282 | Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases ... |
276-358 | 6.32e-03 | ||||
Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold. Pssm-ID: 431196 [Multi-domain] Cd Length: 340 Bit Score: 38.36 E-value: 6.32e-03
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Blast search parameters | ||||
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