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Conserved domains on  [gi|447087373|ref|WP_001164629|]
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MULTISPECIES: DUF3113 family protein [Bacteria]

Protein Classification

DUF3113 family protein( domain architecture ID 10568278)

DUF3113 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3113 pfam11310
Protein of unknown function (DUF3113); This family of proteins has no known function. It has a ...
 1-60 2.03e-30

Protein of unknown function (DUF3113); This family of proteins has no known function. It has a highly conserved sequence.


:

Pssm-ID: 288203  Cd Length: 60  Bit Score: 100.82  E-value: 2.03e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 447087373   1 MQHQAYINASVDIRIPTEVESVNYNQIDKEKENLADYLFNNPGELLKYNVINIKVLDLEV 60
Cdd:pfam11310  1 MQHQAYINASIDIRIPTEVESHHFDDIDDEKDMLADRLDDNPDELLKYDNINIKHADIEV 60
 
Name Accession Description Interval E-value
DUF3113 pfam11310
Protein of unknown function (DUF3113); This family of proteins has no known function. It has a ...
 1-60 2.03e-30

Protein of unknown function (DUF3113); This family of proteins has no known function. It has a highly conserved sequence.


Pssm-ID: 288203  Cd Length: 60  Bit Score: 100.82  E-value: 2.03e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 447087373   1 MQHQAYINASVDIRIPTEVESVNYNQIDKEKENLADYLFNNPGELLKYNVINIKVLDLEV 60
Cdd:pfam11310  1 MQHQAYINASIDIRIPTEVESHHFDDIDDEKDMLADRLDDNPDELLKYDNINIKHADIEV 60
Mcm2 COG1241
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and ...
 22-59 2.86e-03

DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and repair];


Pssm-ID: 440854 [Multi-domain]  Cd Length: 682  Bit Score: 33.62  E-value: 2.86e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 447087373  22 VNYNQIDKEKENLADYLFNNPGELLKYNVINIKVLDLE 59
Cdd:COG1241   37 VDYNDLYSFDPDLADDLLENPDEVLEAAEEALREIDLE 74
 
Name Accession Description Interval E-value
DUF3113 pfam11310
Protein of unknown function (DUF3113); This family of proteins has no known function. It has a ...
 1-60 2.03e-30

Protein of unknown function (DUF3113); This family of proteins has no known function. It has a highly conserved sequence.


Pssm-ID: 288203  Cd Length: 60  Bit Score: 100.82  E-value: 2.03e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 447087373   1 MQHQAYINASVDIRIPTEVESVNYNQIDKEKENLADYLFNNPGELLKYNVINIKVLDLEV 60
Cdd:pfam11310  1 MQHQAYINASIDIRIPTEVESHHFDDIDDEKDMLADRLDDNPDELLKYDNINIKHADIEV 60
Mcm2 COG1241
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and ...
 22-59 2.86e-03

DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and repair];


Pssm-ID: 440854 [Multi-domain]  Cd Length: 682  Bit Score: 33.62  E-value: 2.86e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 447087373  22 VNYNQIDKEKENLADYLFNNPGELLKYNVINIKVLDLE 59
Cdd:COG1241   37 VDYNDLYSFDPDLADDLLENPDEVLEAAEEALREIDLE 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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