|
Name |
Accession |
Description |
Interval |
E-value |
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
12-701 |
0e+00 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 668.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 12 IAKHKWSAVIAWIVIVAAiLIPLATNAPK--FDNDIKMTGLESLDTNKKIEKHFNQDSEkAQIRVVFkTTKDDGIVQPNI 89
Cdd:COG2409 1 VARHRWLVLLAWLVLLVA-LGVLAPQLGGslSSNGFFLPGSESQRAADLLAEAFPESDG-ASAVVVV-EAPDGTLTDPAF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 90 AEDIKKTLEDIKKDDkHIDKISDPYENKQ---ISKDKTTAFADITYDVSQTSLKDGSRDNVKSHLKDLRDNhNVQTELTG 166
Cdd:COG2409 78 RAAVAALVARLRADP-GVAGVQDPWDDPAaglVSEDGKAALVTVTLDGDAGDEAAEAVDALRDAVAAAPAP-GLTVYVTG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 167 TGMTSTEVG-------GNSELVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVTLTLAVMIG 239
Cdd:COG2409 156 PAALAADLNeafeedlGRAELITLPVALVVLLLVFRSLVAALLPLLTAGLAVGVALGLLALLAAFTDVSSFAPNLLTMLG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 240 LAVGIDYALFILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSA 319
Cdd:COG2409 236 LGVGIDYALFLVSRYREELRAGEDREEAVARAVATAGRAVLFSGLTVAIALLGLLLAGLPFLRSMGPAAAIGVAVAVLAA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 320 LTLLPALISIFHKRIkvNKLQSNFKKDIDTP-------WSKFITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPA 392
Cdd:COG2409 316 LTLLPALLALLGRRV--FWPRRPRRRRAAAPesgfwrrLARAVVRRPVPVLVAAVAVLLALALPALGLRLGLPDADSLPA 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 393 DSTQKKAYDIISDKFGEGFNGqiPMLINVKDKKDDPQGLQQDLQSVYKDIKDKKNVDIVTPPQMS--KDNDYALMVVIPK 470
Cdd:COG2409 394 DSPSRQGYDALAEHFPPGSNG--PLTVVVESDDDLDPADLAALDALAAALAAVPGVASVQPPTRPegTDGDAARLQVVPD 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 471 QGPNAESTNDLVHDLRDyhKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFATVIVVLAFFLLMIVFRSILIPLKAVL 550
Cdd:COG2409 472 GDPDSPEAIDLVDRLRD--AAAPALEGAEVLVGGTTAVNIDISDALADDLPLVIPVVLGLIFLLLLLLFRSVVAPLKAVL 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 551 GFVLSLMATLGFTTLVMQDGFmkGLFGIeTTGPMLAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKTGDNDYSIKVGLK 630
Cdd:COG2409 550 TNLLSLGAALGVLVLVFQHGW--LLLGF-TPGPLDSFVPLLLFVILFGLGMDYEVFLVSRIREEYDRGGGTREAVIRGLA 626
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446974161 631 ESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFDAFVVRMMLIPALTKLFGKGSWYLPAWLNR 701
Cdd:COG2409 627 RTGRVITSAALIMAAVFAAFATSPLVFLKQIGFGLAVGVLLDAFVVRMLLVPALMALLGRWNWWLPRWLDR 697
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
3-690 |
3.01e-69 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 244.00 E-value: 3.01e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 3 KFLYKMGTFIAKHKWsAVIAWIVIVAAILIPLATNApKFDNDIKM---TGLESLDTNKKIEKHFNQDSekaQIRVVFKTT 79
Cdd:COG1033 2 RLMERLARFILRHRK-LVLLLFLLLTLLLAYGAPKL-EVDTDFESllpEDDPSVQAYDEFEEEFGGDD---TVVVAVEGK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 80 KD--------------------DGI--------------------VQPNIAEDIKKTLEDIKKDDKHIDKiSDPYENKQI 119
Cdd:COG1033 77 DDiftpetlealrelteeleeiPGVdsvtsltnvrategtedgltVEPLIPDELPASPEELAELREKVLS-SPLYVGRLV 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 120 SKDKTTAFADITYDVSQTSLKDGSR---DNVKSHLKDLRDNhNVQTELTGTGMTSTEVGGNSE-------LVGIIVAFVV 189
Cdd:COG1033 156 SPDGKATLIVVTLDPDPLSSDLDRKevvAEIRAIIAKYEDP-GVEVYLTGFPVLRGDIAEAIQsdlaiffPLALLLILLL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 190 LLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIpnVTLTLAVMIgLAVGIDYALFILFRYRQVMKTETDYIKGIG 269
Cdd:COG1033 235 LFLFFRSLRGVLLPLLVVLLAVIWTLGLMGLLGIPLSP--LTILVPPLL-LAIGIDYGIHLLNRYREERRKGLDKREALR 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 270 LAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSALTLLPALISIFHKRIKVNKLQSNfKKDIDT 349
Cdd:COG1033 312 EALRKLGPPVLLTSLTTAIGFLSLLFSDIPPIRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPKPKTRRLKK-PPELGR 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 350 PWSK---FITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPADSTQKKAYDIISDKFGegfnGQIPMLINVKDKKD 426
Cdd:COG1033 391 LLAKlarFVLRRPKVILVVALVLAVVSLYGISRLKVEYDFEDYLPEDSPIRQDLDFIEENFG----GSDPLEVVVDTGEP 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 427 DP----------QGLQQDLQ------------SVYKDIK------DKKNVDI--------------------VTPPQMSK 458
Cdd:COG1033 467 DGlkdpevlkeiDRLQDYLEslpevgkvlslaDLVKELNqalnegDPKYYALpesrellaqlllllssppgdDLSRFVDE 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 459 DNDYALMVVIPKQGPNAEsTNDLVHDLRDYHKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFATVIVVLAFFLLMIV 538
Cdd:COG1033 547 DYSAARVTVRLKDLDSEE-IKALVEEVRAFLAENFPPDGVEVTLTGSAVLFAAINESVIESQIRSLLLALLLIFLLLLLA 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 539 FRSILIPLKAVLGFVLSLMATLGfttlVMqdgfmkGLFGIEttgpmLAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKT 618
Cdd:COG1033 626 FRSLRLGLISLIPNLLPILLTFG----LM------GLLGIP-----LNIATAVVASIALGIGVDYTIHFLSRYREERRKG 690
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446974161 619 GDNDYSIKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFdAFVVRMMLIPALTKLFGK 690
Cdd:COG1033 691 GDLEEAIRRALRTTGKAILFTSLTLAAGFGVLLFSSFPPLADFGLLLALGLLV-ALLAALLLLPALLLLLDP 761
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
51-333 |
1.20e-55 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 194.82 E-value: 1.20e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 51 ESLDTNKKIEKHFNQdSEKAQIRVVFKTTKDDGIVQPNIAEDIKKTLEDIKKDDKHIDKISDPYENKQ-----ISKDKTT 125
Cdd:pfam03176 8 PSVRAMDRLGAAFPQ-ADSDPIIVVVLGEGDQALGDAAAEAGYDTLVDALRADTGHVGSVQDFWGDPDtaalfVSPDGKA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 126 AFADITYDVSQ-TSLKDGSRDNVKSHLKDLRDNHNVQTELTGTGMTSTEV--GGNS-----ELVGIIVAFVVLLITFGSV 197
Cdd:pfam03176 87 AYVVVTLEGDPgTTEADESVAAVRDAVEQAPPPEGLKAYLTGPAATVADLrdAGDRdlgliEAVTLVVIFIILLIVYRSV 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 198 IAAGLPIISALIGLASGVGIISLLTYAFDIP--NVTLTLAVMIGLAVGIDYALFILFRYRQVMKTETDYIKGIGLAIGTA 275
Cdd:pfam03176 167 VAALLPLLTVGLSLGAAQGLVAILAHILGIGlsTFALNLLVVLLIAVGTDYALFLVSRYREELRAGEDREEAVIRAVRGT 246
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 446974161 276 GSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSALTLLPALISIFHKR 333
Cdd:pfam03176 247 GKVVTAAGLTVAIAMLALSFARLPVFAQVGPTIAIGVLVDVLAALTLLPALLALLGRW 304
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
180-687 |
2.79e-36 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 146.52 E-value: 2.79e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 180 LVGIIVAfVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIpNVTLTLAVMIGlaVGIDYALFILFRYRQVMK 259
Cdd:TIGR00921 201 ISGILVV-LVLLLDFKRWWRPLLPLVIILFGVAWVLGIMGWLGIPLYA-TTLLAVPMLIG--VGIDYGIQTLNRYEEERD 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 260 TETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSALTLLPA-LISIFHKRIKVNK 338
Cdd:TIGR00921 277 IGRAKGEAIVTAVRRTGRAVLIALLTTSAGFAALALSEFPMVSEFGLGLVAGLITAYLLTLLVLPAlLQSIDIGREKVKK 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 339 LQSNFK------KDIDTPWSKFITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPADSTQKKAYDIISDKFGeGFN 412
Cdd:TIGR00921 357 EIIAIGgksseiEEELSKVLSITVRHPVPALVAALIITGLGLYGAAGIKPEVNIEKFIPQDLPSLQARKVIESHMG-GSH 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 413 GQIPMLINVKDKKDdPQgLQQDLQSVYKDIKDKKNVDIVTPPQ------MSKDNDYALMVVIPKQGPNAESTNDLVHDLR 486
Cdd:TIGR00921 436 DFATILVKADDVRD-PE-LVRFMDELSRDIKATGVAARVFGAPsiidlvKEVEGLPAPERSALEPIPEDEEGGYISGGQI 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 487 DYH----KDAQDKY------------------GFKTEISGQSVINIDMSKKLNEAIPLFATVIVVLAFFLLMIVFRSili 544
Cdd:TIGR00921 514 KVAviqvQLKQGEPkvqgrkilrdvqhehpppGVKVGVTGLPVAFAEMHELVNEGMRRMTIAGAILVLMILLAVFRN--- 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 545 PLKAVLGFVlSLMATLGFTTLVMqdgfmkGLFGIETTgPMLAflpvITIGILFGLAMDYEVFLMSRIHEEYSKTGDNDyS 624
Cdd:TIGR00921 591 PIKAVFPLI-AIGSGILWAIGLM------GLRGIPSF-LAMA----TTISIILGLGMDYSIHLAERYFEERKEHGPKE-A 657
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446974161 625 IKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFDAFVVrMMLIPALTKL 687
Cdd:TIGR00921 658 ITHTMERTGPGILFSGLTTAGGFLSLLLSHFPIMRNFGLVQGIGVLSSLTAA-LVVFPALLVL 719
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
391-696 |
8.61e-32 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 127.02 E-value: 8.61e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 391 PADSTQKKAYDIISDKFGEGfnGQIPMLINVKDKKDDPQGLQQDLQSVYKDI----KDKKNVDIVTPPQ---------MS 457
Cdd:pfam03176 4 PADAPSVRAMDRLGAAFPQA--DSDPIIVVVLGEGDQALGDAAAEAGYDTLVdalrADTGHVGSVQDFWgdpdtaalfVS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 458 KDNDYALMVVIPKQGPNAESTNDLVHDLRDYHKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFATVIVVLAFFLLMI 537
Cdd:pfam03176 82 PDGKAAYVVVTLEGDPGTTEADESVAAVRDAVEQAPPPEGLKAYLTGPAATVADLRDAGDRDLGLIEAVTLVVIFIILLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 538 VFRSILIPLKAVLGFVLSLMATLGfTTLVMQDGfmkGLFGIETTGPMLAFLpvitigILFGLAMDYEVFLMSRIHEEYSK 617
Cdd:pfam03176 162 VYRSVVAALLPLLTVGLSLGAAQG-LVAILAHI---LGIGLSTFALNLLVV------LLIAVGTDYALFLVSRYREELRA 231
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446974161 618 TGDNDYSIKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFDAFVVRmMLIPALTKLFGKGSWYLP 696
Cdd:pfam03176 232 GEDREEAVIRAVRGTGKVVTAAGLTVAIAMLALSFARLPVFAQVGPTIAIGVLVDVLAAL-TLLPALLALLGRWGLWPP 309
|
|
| actII |
TIGR00833 |
Transport protein; The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family ... |
16-694 |
1.77e-28 |
|
Transport protein; The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family (TC 2.A.6.5)Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. This sub-family includes the S. coelicolor ActII3 protein, which may play a role in drug resistance, and the M. tuberculosis MmpL7 protein, which catalyzes export of an outer membrane lipid, phthiocerol dimycocerosate. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 129913 [Multi-domain] Cd Length: 910 Bit Score: 122.77 E-value: 1.77e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 16 KWSAVIAWIVIVAAILIPLATNAPKFDNDIKM---TGLESLDTNKKIEKHFNQDSEKAQIRVVFKTTKDDGIVQPNI-AE 91
Cdd:TIGR00833 3 AYGIIGVWIATAISLQLLAPLLEDVSYFRLQAelpGGAASSIAVKEMSAAFQEAIRDPKIILVLESNERLGDKDYATyDA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 92 DIKKTLEDIKKDDKHIDKISDPY-ENKQISKDKTTAFADITYDVSQTSLKDG-SRDNVKSHLKDLRDNHNVQTELTGTGM 169
Cdd:TIGR00833 83 LIAKLRADIMHVISVVDFWGPPEaAEGLRSDDGKATIIIVNLAGEKGQKEAQeAINAVRRIVEQTNAPDGLTVHVTGPLA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 170 T---STEVGGNS----ELVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVTLTLAVMIGLAV 242
Cdd:TIGR00833 163 TiadILESGDKDmnriTATTGIIVLIILLLVYRSPITMLVPLVSVGFSVVVAQGIVSLLGIPGLIGVNAQTTVLLTALVI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 243 --GIDYALFILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSAL 320
Cdd:TIGR00833 243 gaGTDYAVFLTGRYHEERRKGESLEEAAAEALRGTGKAILGSALTVAVAFLALSLARLPSFKTLGVSCAVGVLVALLNAV 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 321 TLLPALISIFHKR--------IKVNKLQSNFKKDID-TPWSKFITGNALAAVLLGLIILVA------AAIPVS------- 378
Cdd:TIGR00833 323 TLTPALLTLEGREglmkpgrkSKIRFIWRRLGTAVVrRPWPILVTTLIISGVSLLALPLIRtgyddeKMIPTDlesvqgy 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 379 -----H--------MRLGIPDD-----------------------GV-------KPADSTQKKAYdiISDKFGEGFNGQI 415
Cdd:TIGR00833 403 eaadrHfpgnsmdpMVVMIKSDhdvrnpalladidrfereikavpGInmvqetqRPDGVVIKKTY--LTFQAGNLGDQLD 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 416 PMLINVKDKKDD------------------PQGLQQD------------------------------------------- 434
Cdd:TIGR00833 481 EFSDQLTSRQAYllqdaekiaeaiaglrlvQAGMRLDgenlgqvslavrlmqqaisklqgsagdvfdifdplrrfvaaip 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 435 ---------------------------LQSVYKDIKDK------------------------------------------ 445
Cdd:TIGR00833 561 ecranpvcsvareivqaadtvvssaakLADAAGQLARGiadvasalsqvsglpnaldgigtqlaqmresaagvqdllnel 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 446 --------------KNVDIVTPPQMSKDNDY--------------ALMVVIPKQGPNAESTNDLVHDLRDYHKDAQDKYG 497
Cdd:TIGR00833 641 sdysmtmgklkgnaMGVDFYAPPRIFTDPNFkavldyflspdghaARLLVYGDGSPAGDQGAQEFNAIRTVAEEAIQRAD 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 498 F---KTEISGQSVINIDMSKKLNEAIPLFATVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLVMQDgfmkg 574
Cdd:TIGR00833 721 LepaKVELAGVSAVNRDLRDLVNSDLGLISIITLAIVFMILALLLRAPVAPIVLIGSVALSYLWALGLSVLAFQH----- 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 575 LFGIEttgpMLAFLPVITIGILFGLAMDYEVFLMSRIHEEySKTGdNDYSIKVGLKESGPVIVAAALIMFSVFFAFVFQE 654
Cdd:TIGR00833 796 ILGAE----LHWSVLAGVFVLLVALGVDYNMLLVSRIKEE-SPAG-NRTGIIRALGSTGGVITAAGLVFAGTMAALASAQ 869
|
890 900 910 920
....*....|....*....|....*....|....*....|
gi 446974161 655 DVMIKSMGMALAFGVLFDAFVVRMMLIPALTKLFGKGSWY 694
Cdd:TIGR00833 870 LTAIAQFGFTVGVGILLDTFIVRSVTVPALTLLLGRWIWW 909
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
1-335 |
5.27e-28 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 120.73 E-value: 5.27e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 1 MAKFLYKMGTFIAKHKWSAVIAwIVIVAAILIPLATNAPKFDNDIKM--TGLESLDTNKKIEKHFNQDSekaQIRVVFKT 78
Cdd:COG1033 388 LGRLLAKLARFVLRRPKVILVV-ALVLAVVSLYGISRLKVEYDFEDYlpEDSPIRQDLDFIEENFGGSD---PLEVVVDT 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 79 TKDDGIVQPNIAEDIKKTLEDIKK-----------------------DDKHIDKISDPYE-----------------NKQ 118
Cdd:COG1033 464 GEPDGLKDPEVLKEIDRLQDYLESlpevgkvlsladlvkelnqalneGDPKYYALPESREllaqlllllssppgddlSRF 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 119 ISKDKTTAFADITYDVSQTSLKDGSRDNVKSHLKDLRDNHNVQTELTGTGMTSTEVGGN-------SELVGIIVAFVVLL 191
Cdd:COG1033 544 VDEDYSAARVTVRLKDLDSEEIKALVEEVRAFLAENFPPDGVEVTLTGSAVLFAAINESviesqirSLLLALLLIFLLLL 623
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 192 ITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVTLtLAVMIGLAVgiDYALFILFRYRQVMKTETDYIKGIGLA 271
Cdd:COG1033 624 LAFRSLRLGLISLIPNLLPILLTFGLMGLLGIPLNIATAVV-ASIALGIGV--DYTIHFLSRYREERRKGGDLEEAIRRA 700
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446974161 272 IGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSALTLLPALISIFHKRIK 335
Cdd:COG1033 701 LRTTGKAILFTSLTLAAGFGVLLFSSFPPLADFGLLLALGLLVALLAALLLLPALLLLLDPRIA 764
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
3-327 |
2.47e-18 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 89.90 E-value: 2.47e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 3 KFLYKMGTFIAKHKWSAVIAWIVIVAAIL-----IPLATNAPKFDNdikmTGLESLDTNKKIEKHFNQDSEKAQIRVvfk 77
Cdd:TIGR00921 370 EELSKVLSITVRHPVPALVAALIITGLGLygaagIKPEVNIEKFIP----QDLPSLQARKVIESHMGGSHDFATILV--- 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 78 ttKDDGIVQPNIAEDIKKTLEDIKKDDKH--------------------------IDKISDPYENKQISKDkttafaDIT 131
Cdd:TIGR00921 443 --KADDVRDPELVRFMDELSRDIKATGVAarvfgapsiidlvkeveglpapersaLEPIPEDEEGGYISGG------QIK 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 132 YDVSQTSLK-DGSRDNVKSHLKDLRDNH---NVQTELTGTGMTSTEVG-------GNSELVGIIVAFVVLLITFGSVIAA 200
Cdd:TIGR00921 515 VAVIQVQLKqGEPKVQGRKILRDVQHEHpppGVKVGVTGLPVAFAEMHelvnegmRRMTIAGAILVLMILLAVFRNPIKA 594
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 201 GLPIISALIGLASGVGIISLLTYAFdipnvTLTLAVMIG--LAVGIDYALFILFRYRQVMKtETDYIKGIGLAIGTAGSA 278
Cdd:TIGR00921 595 VFPLIAIGSGILWAIGLMGLRGIPS-----FLAMATTISiiLGLGMDYSIHLAERYFEERK-EHGPKEAITHTMERTGPG 668
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 446974161 279 VVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSALTLLPALI 327
Cdd:TIGR00921 669 ILFSGLTTAGGFLSLLLSHFPIMRNFGLVQGIGVLSSLTAALVVFPALL 717
|
|
| actII |
TIGR00833 |
Transport protein; The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family ... |
391-702 |
2.84e-17 |
|
Transport protein; The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family (TC 2.A.6.5)Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. This sub-family includes the S. coelicolor ActII3 protein, which may play a role in drug resistance, and the M. tuberculosis MmpL7 protein, which catalyzes export of an outer membrane lipid, phthiocerol dimycocerosate. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 129913 [Multi-domain] Cd Length: 910 Bit Score: 86.95 E-value: 2.84e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 391 PADSTQKKAYDIISDKFGEGFNGQIPMLINVKDKKDDPQGLQQDLQSVYK---DIKDK-KNVDIVTPPQM-----SKDND 461
Cdd:TIGR00833 37 PGGAASSIAVKEMSAAFQEAIRDPKIILVLESNERLGDKDYATYDALIAKlraDIMHViSVVDFWGPPEAaeglrSDDGK 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 462 YALMVVIPKQGPNAESTNDLVHDLRDYHKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFATVIVVLAFFLLMIVFRS 541
Cdd:TIGR00833 117 ATIIIVNLAGEKGQKEAQEAINAVRRIVEQTNAPDGLTVHVTGPLATIADILESGDKDMNRITATTGIIVLIILLLVYRS 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 542 ILIplkavlgfVLSLMATLGFTtLVMQDGFMkGLFGIETTGPMLAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKTGDN 621
Cdd:TIGR00833 197 PIT--------MLVPLVSVGFS-VVVAQGIV-SLLGIPGLIGVNAQTTVLLTALVIGAGTDYAVFLTGRYHEERRKGESL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 622 DYSIKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFdAFVVRMMLIPALTKLFGKGSWYLPAWLNR 701
Cdd:TIGR00833 267 EEAAAEALRGTGKAILGSALTVAVAFLALSLARLPSFKTLGVSCAVGVLV-ALLNAVTLTPALLTLEGREGLMKPGRKSK 345
|
.
gi 446974161 702 I 702
Cdd:TIGR00833 346 I 346
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
2-330 |
5.26e-16 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 82.51 E-value: 5.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 2 AKFLYKMGTFIAKHKWsaviAWIVIVAAILIPLATNAPKF-----DNDIKMTGLESLDTNKKIEKHFNQDSEkAQIRVVF 76
Cdd:COG2409 346 SGFWRRLARAVVRRPV----PVLVAAVAVLLALALPALGLrlglpDADSLPADSPSRQGYDALAEHFPPGSN-GPLTVVV 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 77 KTTKDDGIVQPNIAEDIKKTLEDIkkddKHIDKISDPYENKqiSKDKTTAFADITYDVSQTSlkDGSRDnvksHLKDLRD 156
Cdd:COG2409 421 ESDDDLDPADLAALDALAAALAAV----PGVASVQPPTRPE--GTDGDAARLQVVPDGDPDS--PEAID----LVDRLRD 488
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 157 nhNVQTELTGtgmTSTEVGGNS--------------ELVGIIV---AFVVLLITFGSVIAAGLPIISALIGLASGVGIIS 219
Cdd:COG2409 489 --AAAPALEG---AEVLVGGTTavnidisdaladdlPLVIPVVlglIFLLLLLLFRSVVAPLKAVLTNLLSLGAALGVLV 563
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 220 LL----TYAFDIPNVTLT-----LAVMIGLAVGIDYALFILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVtVVIAV 290
Cdd:COG2409 564 LVfqhgWLLLGFTPGPLDsfvplLLFVILFGLGMDYEVFLVSRIREEYDRGGGTREAVIRGLARTGRVITSAAL-IMAAV 642
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 446974161 291 -CGLSLVGIDFLAVMGFASAISVIF-AVFSALTLLPALISIF 330
Cdd:COG2409 643 fAAFATSPLVFLKQIGFGLAVGVLLdAFVVRMLLVPALMALL 684
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
359-688 |
8.76e-15 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 78.34 E-value: 8.76e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 359 ALAAVLLGLIILVAAAIpvSHMRLGIPDDGVKPADSTQKKAYDIISDKFGEGfNGQIPMLINVKDKKDDP-----QGLQQ 433
Cdd:TIGR00921 6 AIILVFLALLILSAYGA--QHLNVESDTEKQLPKDFESYKWYHVLQREFGTS-TKTLLVVIEGDDVTRKPvldymRRLEQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 434 DLQSV-------------------YKDIKDKKNVDIVT---PPQ----MSKDNDYALMVVIPKQGPNAESTNDLVHDLRD 487
Cdd:TIGR00921 83 RLREKpyvtnvrsaadimrqipgnFPLPVTMPEVRPLMseyPRSkemfLSKDHTVAIIIVQLKSDADYKQVVPIYNDVER 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 488 YHKDAQDKYGFKTEISGQSVINIDMSKKLNEAIPLFATVIVVLAFFLLMIVFRSiliPLKAVLGFVLSLMAtlgfttLVM 567
Cdd:TIGR00921 163 SLERTNPPSGKFLDVTGSPAINYDIEREFGKDMGTTMAISGILVVLVLLLDFKR---WWRPLLPLVIILFG------VAW 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 568 QDGFMkGLFGIETTGPMLAFLPVitigiLFGLAMDYEVFLMSRIHEEYSKTGDNDYSIKVGLKESGPVIVAAALIMFSVF 647
Cdd:TIGR00921 234 VLGIM-GWLGIPLYATTLLAVPM-----LIGVGIDYGIQTLNRYEEERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAGF 307
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 446974161 648 FAFVFQEDVMIKSMGMALAFGVLFdAFVVRMMLIPALTKLF 688
Cdd:TIGR00921 308 AALALSEFPMVSEFGLGLVAGLIT-AYLLTLLVLPALLQSI 347
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
153-382 |
3.28e-12 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 70.41 E-value: 3.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 153 DLRDNHNVQTELTGTG------MTSTEVGGNSELVGIIVAFVVLLI----TFGSVIAAGLPIISALI---GLAS-GVGII 218
Cdd:TIGR03480 242 RLDEDHGVTVRLTGEValsdeeLATVSEGATVAGLLSFVLVLVLLWlalrSPRLVFAVLVTLIVGLIltaAFATlAVGHL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 219 SLLTYAFdipnvtltlAVM-IGLavGIDYALFILFRYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVcgLSLVG 297
Cdd:TIGR03480 322 NLISVAF---------AVLfIGL--GVDFAIQFSLRYREERFRGGNHREALSVAARRMGAALLLAALATAAGF--FAFLP 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 298 IDFLAV--MGFASAISVIFAVFSALTLLPALISIFHKRIKVNKLQSNFKKDIDTpwskFITGNALAAVLLGLIILVAAAI 375
Cdd:TIGR03480 389 TDYKGVseLGIIAGTGMFIALFVTLTVLPALLRLLRPPRRRKPPGYATLAPLDA----FLRRHRRPVLGVTLILGIAALA 464
|
....*..
gi 446974161 376 PVSHMRL 382
Cdd:TIGR03480 465 LLPQLRF 471
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
497-688 |
1.93e-07 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 55.00 E-value: 1.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 497 GFKTEISGQSVINIDMSKKLNEAIPLFATVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLvmqdgfmkglf 576
Cdd:TIGR03480 248 GVTVRLTGEVALSDEELATVSEGATVAGLLSFVLVLVLLWLALRSPRLVFAVLVTLIVGLILTAAFATL----------- 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 577 giettgpMLAFLPVITIG--ILF-GLAMDYEVFLMSRIHEEYSKTGDNDYSIKVGLKESGPVIVAAALIMFSVFFAFVFQ 653
Cdd:TIGR03480 317 -------AVGHLNLISVAfaVLFiGLGVDFAIQFSLRYREERFRGGNHREALSVAARRMGAALLLAALATAAGFFAFLPT 389
|
170 180 190
....*....|....*....|....*....|....*
gi 446974161 654 EDVMIKSMGMALAFGVlFDAFVVRMMLIPALTKLF 688
Cdd:TIGR03480 390 DYKGVSELGIIAGTGM-FIALFVTLTVLPALLRLL 423
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
180-374 |
2.52e-06 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 51.39 E-value: 2.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 180 LVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLtyaFdiPNVT-LTL---AVMIGlaVGIDYALFILFRYR 255
Cdd:COG4258 256 LISLLGILLLLLLVFRSLRPLLLGLLPVAVGALAGLAAVSLV---F--GSVHgITLgfgSSLIG--VAVDYSLHYLTHRR 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 256 --------QVMKtetDYIKGIGLAIGTagSAVVFAGvtvviavcgLSLVGIDFLAVMGFASAISVIFAVFSALTLLPALI 327
Cdd:COG4258 329 aagewdprAALR---RIWPTLLLGLLT--TVLGYLA---------LLFSPFPGLRQLGVFAAAGLLAAALTTLLWLPLLL 394
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 446974161 328 SifHKRIKVNKLQSNFkkdIDTPWSKFITGNALAAVLLGLIILVAAA 374
Cdd:COG4258 395 P--RAAPRPPAPALAL---LARLLARWPRRLRWLLALLAVLALASLL 436
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
180-325 |
3.48e-06 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 50.62 E-value: 3.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 180 LVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIPNVtltLAVMIGLAVGIDYALFILfryRQVMK 259
Cdd:COG4258 646 LLALLLILLLLLLRLRSLRRALRVLLPPLLAVLLTLAILGLLGIPLNLFHL---IALLLVLGIGIDYALFFT---EGLLD 719
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446974161 260 TETDyikgiglaiGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSALTLLPA 325
Cdd:COG4258 720 KGEL---------ARTLLSILLAALTTLLGFGLLAFSSTPALRSFGLTVLLGILLALLLAPLLAPR 776
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
180-487 |
9.16e-06 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 49.33 E-value: 9.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 180 LVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFDIpnvtLTLAVMIgLAVGI--DYALFIL---FRY 254
Cdd:COG0841 338 LEAILLVVLVVFLFLRSWRATLIPAVAIPVSLIGTFAVMYLLGFSLNI----LTLFALV-LAIGIvvDDAIVVVeniERH 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 255 RQV-MKTETDYIKG---IGLAigtagsavVFAGVTVVIAV-CGLSLV-GI--DFLAVMGFASAISVIFAVFSALTLLPAL 326
Cdd:COG0841 413 MEEgLSPLEAAIKGareVAGA--------VIASTLTLVAVfLPLAFMgGItgQLFRQFALTVAIALLISLFVALTLTPAL 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 327 ISIF---HKRIKVNKLQSNFKKDID------TPWSKFITGNALAAVLLGLIILVAAAIPVSHMRLG-IP--DDGV----- 389
Cdd:COG0841 485 CARLlkpHPKGKKGRFFRAFNRGFDrltrgyGRLLRWALRHRKLTLLVALALLALSVLLFGRLPTEfFPeeDQGQiivsv 564
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 390 -KPADST----------------QKKAYDIISDKFGEGFNGQIP----MLINVKDKKD---DPQGLQQDLQSVYKDIKDK 445
Cdd:COG0841 565 qLPPGTSlerteavvrqveeillEVPEVESVFSVVGFSGGGSGSnsgtIFVTLKPWDErdrSADEIIARLREKLAKIPGA 644
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 446974161 446 KnVDIVTPPQMSKDNDYALMVVIpkQGPNAESTNDLVHDLRD 487
Cdd:COG0841 645 R-VFVFQPPAGGLGSGAPIEVQL--QGDDLEELAAAAEKLLA 683
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
180-380 |
1.88e-05 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 48.49 E-value: 1.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 180 LVGIIVAFVVLLITFGSVIAAglpIISAL-IGLASGVGIISLltYAFDIPNVTLTL---AVMIGLAVgiDYAL----FIL 251
Cdd:COG3696 342 LEGALLVILVLFLFLGNLRAA---LIVALaIPLSLLFAFIVM--RLFGISANLMSLgglAIDFGIIV--DGAVvmveNIL 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 252 FRYR--QVMKTETDYIKGIGLAIGTAGSAVVFAgvTVVIAVCGL---SLVGID--FLAVMGFASAISVIFAVFSALTLLP 324
Cdd:COG3696 415 RRLEenRAAGTPRERLEVVLEAAREVRRPIFFA--TLIIILVFLpifTLEGVEgkLFRPMALTVIFALLGALLLSLTLVP 492
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 446974161 325 ALISIF---HKRIKVNKLqSNFKKDIDTPWSKFITGNALAAVLLGLIILVAAAIPVSHM 380
Cdd:COG3696 493 VLASLLlrgKVPEKENPL-VRWLKRLYRPLLRWALRHPKLVLAVALVLLVLALALFPRL 550
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
154-327 |
2.19e-05 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 48.07 E-value: 2.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 154 LRDNHNVQTELTGTGMTSTEvGGNSELVGIIVAF--------VVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAF 225
Cdd:TIGR03480 686 VRAVRKVAPDATGAPVSILE-SGDTVVGAFLQAFiyalvaitVLLLLTLRRVRDVLLVLAPLLLAGLLTVAAMVLLGIPF 764
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 226 DIPNVtLTLAVMIGlaVGIDYALFILFRYRQVMKTetdyikGIGLAIGTAgSAVVFAGVTVVIAVCGLSLVGIDFLAVMG 305
Cdd:TIGR03480 765 NFANI-IALPLLLG--LGVDFGIYMVHRWRNGVDS------GNLLQSSTA-RAVFFSALTTATAFGSLAVSSHPGTASMG 834
|
170 180
....*....|....*....|..
gi 446974161 306 FASAISVIFAVFSALTLLPALI 327
Cdd:TIGR03480 835 ILLSLGLGLTLLCTLIFLPALL 856
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
511-701 |
3.46e-05 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 47.67 E-value: 3.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 511 DMSKKLNEAIplfatVIVVLAFFLLMIVFRSILIPLKAVlgfVLSLMATlgFTTLVMQDgfmkglFGIETtgpMLAFLPV 590
Cdd:pfam00873 332 EVVKTLLEAI-----VLVILVMFLFLQNWRATLIPAIAI---PLSLLGT--FAVMKAFG------FSINT---LTLGGLV 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 591 ITIGILfglaMDYEVFLMSRIHEEYSKTG-DNDYSIKVGLKESGPVIVAAALIMFSVFFAFVFQEDV---MIKSMGMALA 666
Cdd:pfam00873 393 LAIGLV----VDDAIVVVENIERVLEENGlKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLtgrIFRQFAITIV 468
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 446974161 667 FGVLFDAFVVrMMLIPALTKLFGKGS-----WYLPAWLNR 701
Cdd:pfam00873 469 LAILLSVLVA-LTLTPALCATLLKPRrepkhGGFFRWFNR 507
|
|
| PRK14726 |
PRK14726 |
protein translocase subunit SecDF; |
182-333 |
3.56e-05 |
|
protein translocase subunit SecDF;
Pssm-ID: 237805 [Multi-domain] Cd Length: 855 Bit Score: 47.41 E-value: 3.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 182 GIIVAFVVLLITFGSVIAAGLPIISALIglASGVGIISLLTYAfdipNVTLTL------AVMIGLAVgiDYALFILFRYR 255
Cdd:PRK14726 378 GLIAAILVAALMIGFYGFLGVIAVIALI--VNVVLIIAVLSLL----GATLTLpgiagiVLTIGMAV--DSNVLIYERIR 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 256 QVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDflAVMGFAS--AISVIFAVFSALTLLPALISIFHKR 333
Cdd:PRK14726 450 EEEKTGHSLIQALDRGFSRALATIVDANVTILIAAVILFFLGSG--AVRGFAVtlAVGILTTVFTAFTLTRSLVAVWLRR 527
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
456-703 |
4.82e-05 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 47.15 E-value: 4.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 456 MSKDNDYALMVVIPKQGPNAESTND-LVHDLRDYHKDAQDKY-GFKTEISGQ---SVINIDMSKKLNEAIPLFATVIVVL 530
Cdd:COG4258 185 VSRDGTWALLLAETRASGFDTDAQQqLVAALRAAFAALNAAFpGAQLLLTGAglfAVAAAQQIKHDISTIGLISLLGILL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 531 affLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLVmqdgfmkglFGIettgpmlafLPVITIGI---LFGLAMDYEV-F 606
Cdd:COG4258 265 ---LLLLVFRSLRPLLLGLLPVAVGALAGLAAVSLV---------FGS---------VHGITLGFgssLIGVAVDYSLhY 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 607 LMSRIHEEysktgdnDYSIKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFdAFVVRMMLIPAL-T 685
Cdd:COG4258 324 LTHRRAAG-------EWDPRAALRRIWPTLLLGLLTTVLGYLALLFSPFPGLRQLGVFAAAGLLA-AALTTLLWLPLLlP 395
|
250
....*....|....*...
gi 446974161 686 KLFGKGSWYLPAWLNRII 703
Cdd:COG4258 396 RAAPRPPAPALALLARLL 413
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
495-684 |
4.86e-04 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 43.69 E-value: 4.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 495 KYGFKTEISgqSVINIDMSKKLNEAIPlfATVIVVLAFFLLMIVFRSILIPLKAV---LGFVLSLMATLGFTTLVMQdgf 571
Cdd:PRK09577 321 KYQIPYETS--SFVRVSMNKVVTTLIE--AGVLVFLVMFLFMQNFRATLIPTLVVpvaLLGTFGVMLAAGFSINVLT--- 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 572 mkgLFGIettgpmlaflpVITIGILfglaMDYEVFLMSRIHEEYSKTGDNDYSIKV-GLKESGPVIVAAALIMFSVFFAF 650
Cdd:PRK09577 394 ---MFGM-----------VLAIGIL----VDDAIVVVENVERLMVEEGLSPYDATVkAMKQISGAIVGITVVLTSVFVPM 455
|
170 180 190
....*....|....*....|....*....|....*..
gi 446974161 651 VFQEDV---MIKSMGMALAFGVLFDAFVVrMMLIPAL 684
Cdd:PRK09577 456 AFFGGAvgnIYRQFALSLAVSIGFSAFLA-LSLTPAL 491
|
|
| 2A060602 |
TIGR00918 |
The Eukaryotic (Putative) Sterol Transporter (EST) Family; |
195-329 |
7.12e-04 |
|
The Eukaryotic (Putative) Sterol Transporter (EST) Family;
Pssm-ID: 273338 [Multi-domain] Cd Length: 1145 Bit Score: 43.33 E-value: 7.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 195 GSVIAAGLPIISalIGLASGVGIISLLTYAFdipNVTLTLAV-MIGLAVGIDYALFILFRYRQVMKtETDYIKGIGLAIG 273
Cdd:TIGR00918 427 GSVGLAGVLLVA--LSVAAGLGLCALLGISF---NAATTQVLpFLALGVGVDDVFLLAHAFSETGQ-NIPFEERTGECLK 500
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 446974161 274 TAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSALTLLPALISI 329
Cdd:TIGR00918 501 RTGASVVLTSISNVTAFFMAALIPIPALRAFSLQAAIVVVFNFAAVLLVFPAILSL 556
|
|
| 2A060602 |
TIGR00918 |
The Eukaryotic (Putative) Sterol Transporter (EST) Family; |
183-330 |
9.74e-04 |
|
The Eukaryotic (Putative) Sterol Transporter (EST) Family;
Pssm-ID: 273338 [Multi-domain] Cd Length: 1145 Bit Score: 42.95 E-value: 9.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 183 IIVAFVVLLITFGSVIAAGLPIISALIGLASGVGIISLLTYAFD-IPNVTLTLAVMIGLAVGIDYALfilfryrQVMKTE 261
Cdd:TIGR00918 975 LACTFLVCALLLLNPWTAGLIVLVLALMTVELFGMMGLLGIKLSaIPVVILIASVGIGVEFTVHIAL-------GFLTAI 1047
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 262 TDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFAS-AISVIFAVFSALTLLPALISIF 330
Cdd:TIGR00918 1048 GDRNRRAVLALEHMFAPVLDGALSTLLGVLMLAGSEFDFIVRYFFAVlAVLTCLGVLNGLVLLPVLLSMF 1117
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
180-375 |
1.37e-03 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 42.28 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 180 LVGIIVAFVVLLITFGSVIAAGLPIISalIGLASGVGIISLLTYAFDIPNVTL-TLAVMIGLAVgiDYALFILFR-YRQV 257
Cdd:pfam00873 338 LEAIVLVILVMFLFLQNWRATLIPAIA--IPLSLLGTFAVMKAFGFSINTLTLgGLVLAIGLVV--DDAIVVVENiERVL 413
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 258 MKTETDYIKGIGLAIGTAGSAVVFaGVTVVIAVCG--LSLVGID--FLAVMGFASAISVIFAVFSALTLLPALISIF--- 330
Cdd:pfam00873 414 EENGLKPLEAAYKSMGEIGGALVA-IALVLSAVFLpiLFLGGLTgrIFRQFAITIVLAILLSVLVALTLTPALCATLlkp 492
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 446974161 331 HKRIKVNKLQSNFKKDIDtpWSKFITGNALAAVLLG-LIILVAAAI 375
Cdd:pfam00873 493 RREPKHGGFFRWFNRMFD--RLTRGYAKLLAKVLRHtAVVLLVALL 536
|
|
| RhaT |
COG0697 |
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ... |
179-327 |
1.45e-03 |
|
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];
Pssm-ID: 440461 [Multi-domain] Cd Length: 290 Bit Score: 41.37 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 179 ELVGIIVAFV-VLLITFGSVIAAGLPIISALIGLASGV--GIISLLT--YAFDIPNVTLTLAVMIGLAVGIdyALFILFR 253
Cdd:COG0697 122 RWLGLLLGFAgVLLIVGPGGGGGGGSLLGDLLALLAALswALYTVLTrrLSRRLDPLTLTFWQMLVGALLL--LPLALLT 199
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446974161 254 YRQVMKTETDYikGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFA--VFSALTLLPALI 327
Cdd:COG0697 200 GLPLPLSAAAW--LALLYLGLFGTALAYLLWFRALRRLGASRAAPLTYLEPVFAVLLGWLLLgePLTPLQLLGAAL 273
|
|
| NodJ |
COG3559 |
Putative exporter of oligosaccharides and polyketide antibiotics DrrB/NodJ, ABC-2 family ... |
180-326 |
1.75e-03 |
|
Putative exporter of oligosaccharides and polyketide antibiotics DrrB/NodJ, ABC-2 family [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442780 [Multi-domain] Cd Length: 529 Bit Score: 41.77 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 180 LVGIIVAFVVLLITFGSV------IAAGLPIISALIGLASGVgiiSLLTYAFdipnvTLTLAVMIGLAVGIdYALFILFR 253
Cdd:COG3559 294 LIGWAIGLAVLGLAYGSLagsvgdLLEDNPALAELLARLGGG---ASLVDAF-----LATLLGILAILAAA-YAVQAVLR 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 254 YRQvmkTETDYIKGIGLAIGT-----AGSAVVFA--GVTVVIAVCGLSLvGIDFLAVMGFASAISVIFAvfSALTLLPAL 326
Cdd:COG3559 365 LRA---EETSGRAEPLLATAVsrtrwLASHLAVAalGSAVLLLVAGLGL-GLGAAAVTGDPGSLGRLLG--AALAQLPAV 438
|
|
| AglD2 |
COG0392 |
Predicted membrane flippase AglD2/YbhN, UPF0104 family [Cell wall/membrane/envelope biogenesis] ... |
209-375 |
5.32e-03 |
|
Predicted membrane flippase AglD2/YbhN, UPF0104 family [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440161 Cd Length: 289 Bit Score: 39.55 E-value: 5.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 209 IGLASGVGIISLLTYAF-----------DIPNVTLTLAVMIGL---AVGIDYALFILFRYRqvmktetdYIKGIGLAIGT 274
Cdd:COG0392 9 LLLALLLTLLSYLLLALrwrlllralgvKLPFRRLFLVSFIGYfgnNIGPGALGGEAVRAR--------LLSRRGVPAGK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 275 AGSAVVFAGVTVVIAVCGLSLVG-------IDFLAVMGFASAISVI-FAVFSALTLLpALISIFHKRIKVNKLQSNFKKD 346
Cdd:COG0392 81 AAAIVALERLTDLLGLLLLAGLGllfgpgaLPGLGNLPGALLLLLLgLALLAAVLLY-LLLLAFRPRLLLRLRRWKLLRK 159
|
170 180 190
....*....|....*....|....*....|....*...
gi 446974161 347 IDTPWSKFITGN---------ALAAVLLGLIILVAAAI 375
Cdd:COG0392 160 IREKLERFLEGLrrlrlsprlLLLQLLLSLLDWLLAAL 197
|
|
| EcfT |
cd16914 |
T component of ECF-type transporters; The transmembrane component (T component) of the energy ... |
512-612 |
5.49e-03 |
|
T component of ECF-type transporters; The transmembrane component (T component) of the energy coupling-factor (ECF)-type transporter is a transmembrane protein important for vitamin uptake in prokaryotes. In addition to the T component, energy-coupling factor (ECF) transporters contain an energy-coupling module that consists of two ATP-binding proteins (known as the A and A' components) and a substrate-binding (S) component. ECF transporters comprise a subgroup of ATP-binding cassette (ABC) transporters that do not make use of water-soluble substrate binding proteins or domains, but instead employ integral membrane proteins for substrate binding, the S component, in contrast to classical ABC importers. The T component links the S component to the ATP-binding subcomplex that is composed of the A and A' components.
Pssm-ID: 410987 Cd Length: 233 Bit Score: 39.44 E-value: 5.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 512 MSKKLNEAIPLFATVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLVMQDGFmkGLFGIETTGPMLA----- 586
Cdd:cd16914 19 LLPSLLLLLLLLLLLLLLLLLAGLPLRLLRLLKRLLFLLLFLLLILLLLPLGGGGGVFGL--GGLGITLEGLLYAlllal 96
|
90 100
....*....|....*....|....*....
gi 446974161 587 -FLPVITIGILFGLAMDYEVFL--MSRIH 612
Cdd:cd16914 97 rLLAIVLAALLLLLTTPPSELLaaLRRLG 125
|
|
| CitMHS |
pfam03600 |
Citrate transporter; |
164-377 |
6.36e-03 |
|
Citrate transporter;
Pssm-ID: 460985 [Multi-domain] Cd Length: 342 Bit Score: 39.60 E-value: 6.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 164 LTGTGMTSTEVGGNSELVGIIVAFVVLLITFGSVIAAGL-------PIISALIGLASG--------VGIISLLTYAFdIP 228
Cdd:pfam03600 17 LGAVLLVLLGVLTPEEALSGIDSPTILLLLGMMIIGAILertglfdRLALKLLRLAGGkprrllvaLMLATALLSAF-LS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446974161 229 NVTlTLAVMIGLAVGIdyalfilfrYRQVMKTETDYIKGIGLAIGTAGSAVVFAGVTVVIAVCGLSLVGIDFLAVMGFAS 308
Cdd:pfam03600 96 NDG-TVLIMIPIVLAL---------ARRLGLPPSPLLIALAFAANIGGTATPIGDPPNIIIASALGLSFGDFGFFMFPPV 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446974161 309 AISVIfavfsaLTLLPALISIFHKRIKVNK-----LQSNFKKDIDTPWSKFITGNALAAVLLGLIILVAAAIPV 377
Cdd:pfam03600 166 GVALL------LVGLLPLLLIFRKLLPVRKeeeaeLEELRKRAIKDKLLLAISALVLALVILGFLLLSVLALAG 233
|
|
| |
