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Concise Results
Standard Results
Full Results
MULTISPECIES: lysine decarboxylase LdcC [Salmonella]
Protein Classification
lysine decarboxylase LdcC ( domain architecture ID 11487770 )
lysine decarboxylase LdcC catalyzes the conversion from L-lysine to cadaverine; constitutively but weakly expressed under various conditions
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
1-713
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1620.58
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 1 MNIIAIMGPHGV Y YKDEPIKELE R ALQ SL GFQ I IWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCS E INQLNEYLPLY 80
Cdd:PRK15399 1 MNIIAIMGPHGV F YKDEPIKELE S ALQ AQ GFQ T IWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCS D INQLNEYLPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 81 AFINT N ST L DVSV H DMRMALWFFEYALG L AEDIA T RI H QYTNEYLDNITPPFTKALFTY A KEGKYTFCTPGHM A GT V YQK 160
Cdd:PRK15399 81 AFINT H ST M DVSV Q DMRMALWFFEYALG A AEDIA I RI R QYTNEYLDNITPPFTKALFTY V KEGKYTFCTPGHM G GT A YQK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 161 SP P GCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSY M VTNGTSTSNKIVGMYAAPAGSTLLI 240
Cdd:PRK15399 161 SP V GCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSY I VTNGTSTSNKIVGMYAAPAGSTLLI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 241 DRNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIP K REFTRDSI AR KVA E T A QAQWPVHAVITNSTYDGLLYNT N WIKQ 320
Cdd:PRK15399 241 DRNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIP R REFTRDSI EE KVA A T T QAQWPVHAVITNSTYDGLLYNT D WIKQ 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 321 M LDVPSIHFDSAWVPYTHFHPIYQGKSGMSG D RVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTS 400
Cdd:PRK15399 321 T LDVPSIHFDSAWVPYTHFHPIYQGKSGMSG E RVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 401 PSYPIVAS I ETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESD S WFFDIWQPE E VDEAECWPV T PGE T WHGF T DAD 480
Cdd:PRK15399 401 PSYPIVAS V ETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESD G WFFDIWQPE N VDEAECWPV A PGE Q WHGF K DAD 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 481 D DHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAY 560
Cdd:PRK15399 481 A DHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAY 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIR Q HDLP E LMLRAF E VLPEMIMTPHQAWQRQIKGEVETVAL D QL 640
Cdd:PRK15399 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIR K HDLP G LMLRAF D VLPEMIMTPHQAWQRQIKGEVETVAL E QL 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446943803 641 P GRVSANMILPYPPGVPLLMPGE R IT QQ SRAVLDFLLMLCSIGQHYPGFETDIHGAKR N EDGVY Q VRVLK H A C 713
Cdd:PRK15399 641 V GRVSANMILPYPPGVPLLMPGE M IT EE SRAVLDFLLMLCSIGQHYPGFETDIHGAKR D EDGVY R VRVLK M A G 713
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
1-713
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1620.58
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 1 MNIIAIMGPHGV Y YKDEPIKELE R ALQ SL GFQ I IWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCS E INQLNEYLPLY 80
Cdd:PRK15399 1 MNIIAIMGPHGV F YKDEPIKELE S ALQ AQ GFQ T IWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCS D INQLNEYLPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 81 AFINT N ST L DVSV H DMRMALWFFEYALG L AEDIA T RI H QYTNEYLDNITPPFTKALFTY A KEGKYTFCTPGHM A GT V YQK 160
Cdd:PRK15399 81 AFINT H ST M DVSV Q DMRMALWFFEYALG A AEDIA I RI R QYTNEYLDNITPPFTKALFTY V KEGKYTFCTPGHM G GT A YQK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 161 SP P GCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSY M VTNGTSTSNKIVGMYAAPAGSTLLI 240
Cdd:PRK15399 161 SP V GCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSY I VTNGTSTSNKIVGMYAAPAGSTLLI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 241 DRNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIP K REFTRDSI AR KVA E T A QAQWPVHAVITNSTYDGLLYNT N WIKQ 320
Cdd:PRK15399 241 DRNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIP R REFTRDSI EE KVA A T T QAQWPVHAVITNSTYDGLLYNT D WIKQ 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 321 M LDVPSIHFDSAWVPYTHFHPIYQGKSGMSG D RVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTS 400
Cdd:PRK15399 321 T LDVPSIHFDSAWVPYTHFHPIYQGKSGMSG E RVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 401 PSYPIVAS I ETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESD S WFFDIWQPE E VDEAECWPV T PGE T WHGF T DAD 480
Cdd:PRK15399 401 PSYPIVAS V ETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESD G WFFDIWQPE N VDEAECWPV A PGE Q WHGF K DAD 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 481 D DHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAY 560
Cdd:PRK15399 481 A DHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAY 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIR Q HDLP E LMLRAF E VLPEMIMTPHQAWQRQIKGEVETVAL D QL 640
Cdd:PRK15399 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIR K HDLP G LMLRAF D VLPEMIMTPHQAWQRQIKGEVETVAL E QL 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446943803 641 P GRVSANMILPYPPGVPLLMPGE R IT QQ SRAVLDFLLMLCSIGQHYPGFETDIHGAKR N EDGVY Q VRVLK H A C 713
Cdd:PRK15399 641 V GRVSANMILPYPPGVPLLMPGE M IT EE SRAVLDFLLMLCSIGQHYPGFETDIHGAKR D EDGVY R VRVLK M A G 713
OKR_DC_1
pfam01276 Orn/Lys/Arg decarboxylase, major domain;
130-545
0e+00
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain]
Cd Length: 417
Bit Score: 688.86
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 130 PP FT KALF T Y AKE G K YTF CT PGH MA G TVY QK S P P G CL FYDFFG G N T L KA DV S I SVT ELG S LLDH T G PHL EA EE Y I AR T FG 209
Cdd:pfam01276 1 PP LY KALF K Y VRR G N YTF HC PGH QG G AGF QK H P A G RF FYDFFG E N L L RI DV C I EDV ELG D LLDH E G AIK EA QK Y A AR V FG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 210 A EQ SY M V T NGTS T SNK I VGM YAAPA G S T L LIDRNCHKS LA H L LM M S DVV P LW L K P T RNA L GI L GGIP KR EF TRDSIARKV 289
Cdd:pfam01276 81 A DK SY F V V NGTS G SNK T VGM AVCTP G D T I LIDRNCHKS IH H A LM L S GAT P VY L E P S RNA Y GI I GGIP LH EF QEETLKEAI 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 290 AE TAQ A QW P VH AVITN S TYDG L LYN TNW I KQM L DVP S -- I H FDSAWV P Y TH F H PIY QGK S G M S G DRVP G KV IF E TQS T HK 367
Cdd:pfam01276 161 AE VPD A KG P RL AVITN P TYDG V LYN AKE I VDT L HHL S dp I L FDSAWV G Y EQ F I PIY ADA S P M G G ENEN G PG IF V TQS V HK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 368 M LAA F SQAS L IH I K GE -- YDEET FNEAFMMH TS TSPSYPI V AS IET AA A ML R GN P G K RL I N RS VERA LH FRK EVQ rlr EE 445
Cdd:pfam01276 241 L LAA L SQAS Y IH K K EG hi VNHDR FNEAFMMH AT TSPSYPI F AS LDV AA K ML E GN S G R RL W N EC VERA IE FRK AID --- TL 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 446 SDSW FF DI W Q PE E VD EA ECWP VT PGETWHGF TDAD D DHM FLDP V K V TILTPGMDE Q G NM SE E G I PA AL VAK F L D E R G V V V 525
Cdd:pfam01276 318 NNCE FF RP W N PE I VD GK ECWP FH PGETWHGF EGYA D NQY FLDP C K L TILTPGMDE D G EY SE F G V PA TI VAK W L R E N G I V P 397
410 420
....*....|....*....|
gi 446943803 526 EKT GPY N L LFLF SI G I D K T R 545
Cdd:pfam01276 398 EKT DLN N I LFLF TP G E D R T K 417
LdcC
COG1982 Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
124-711
0e+00
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain]
Cd Length: 486
Bit Score: 558.57
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 124 Y L D NITP P FTK AL FT YA KE G KYT F CT PGH MA G TVY qkspp G CL FYDFFG G N TLKA D VSI s VTE L GS L L D HT G PHL EA E E Y 203
Cdd:COG1982 1 Y M D QLLT P LFD AL KK YA ER G PVS F HV PGH KG G RGF ----- G RE FYDFFG E N VFRL D LTE - LPG L DD L H D PE G VIK EA Q E L 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 204 I A RT FGA EQSYMVT NGTS TS NK IVGMYAAPA G STL L ID RNCHKS LA H L L MM S DVV P LW L K P T - R N A LGI L GGI PKREFTR 282
Cdd:COG1982 75 A A EA FGA DRTFFLV NGTS SG NK AMILAVCGP G DKV L VP RNCHKS VI H G L IL S GAI P VY L N P E i D N E LGI I GGI TPEAVEE 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 283 DS I arkvaeta QAQWPVHAV ITN S TY D G LL Y NTNW I KQMLD -- VPSIHF D S A WVPYTH FHP IYQ g K S G M S gdrvp GKVIF 360
Cdd:COG1982 155 AL I -------- EHPDAKAVL ITN P TY Y G VC Y DLKA I AELAH eh GIPVLV D E A HGAHFG FHP DLP - R S A M E ----- AGADL 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 361 ET QSTHK M L A A FS Q A S LI H I KG EY - D E E TF NEA F M MHT STSPSY PIV AS IET A AAMLR G N p G KR L INRSV E R A LHF RKE V 439
Cdd:COG1982 221 VV QSTHK T L G A LT Q S S ML H V KG GR v D H E RV NEA L M LLQ STSPSY LLM AS LDV A RRQMA G E - G EE L LDEAL E L A IEA RKE I 299
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 440 QRL reesds WFFDIWQ PE EVD eaecwpvtpgetwhgftda DDDHMF LDP V K V TI LT PG M deqgnmsee GI PAAL VA KF L D 519
Cdd:COG1982 300 NKI ------ PGLYVFG PE DLG ------------------- APGVYD LDP T K L TI DV PG L --------- GI SGYE VA EY L R 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 520 E R - G VV VE KTGP YN L LFL F S I G ID K TRAMG L LRG L T E F KR A YD L N LRVKNM LP dlyaedpdfyrnmriqdlaqgihklir 598
Cdd:COG1982 346 E E y G IQ VE LADL YN I LFL L S L G DT K EDIER L VAA L K E L KR L YD K N APLEEV LP --------------------------- 398
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 599 qhdlpelml R AF EV LPE MI M T P HQ A WQ rqik G E V E T V A L DQLP GR VS A N M IL PYPPG V PLLMPGERIT Q qsr A V L D F L LM 678
Cdd:COG1982 399 --------- L AF PP LPE LV M S P RE A FF ---- A E T E L V P L EEAV GR IA A E M VI PYPPG I PLLMPGERIT E --- E V I D Y L RA 462
570 580 590
....*....|....*....|....*....|...
gi 446943803 679 L CSI G QHY PGFE tdihgakrn EDGVYQV RV L K H 711
Cdd:COG1982 463 L EEA G GRF PGFE --------- DPELRTI RV V K E 486
Orn_deC_like
cd00615 Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
131-441
3.07e-131
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain]
Cd Length: 294
Bit Score: 389.69
E-value: 3.07e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 131 P FTK AL FT YAK E G KYT F CT PGH MA G TVYQ KS ppgcl FY D F F G G N TL KADV SI s V T E L GS LLD H TGP HL EA E E YI AR T FGA 210
Cdd:cd00615 1 P LFE AL KE YAK R G IIS F HV PGH KG G RGFR KS ----- FY E F Y G E N LF KADV TE - L T G L DD LLD P TGP IK EA Q E LA AR A FGA 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 211 EQSYMVT NGTS T SNK I V GMYAAPA G STL LIDRNCHKS LAHL L MM S DV VP LW LKP T RN A - L GI L GGIP KRE F TRDS I arkv 289
Cdd:cd00615 75 KHTFFLV NGTS S SNK A V ILAVCGP G DKI LIDRNCHKS VING L VL S GA VP VY LKP E RN P y Y GI A GGIP PET F KKAL I ---- 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 290 aeta QAQWPVH AVITN S TY D G LL YN TNW I KQMLD -- VPSIHF D S A WVPYTH FHPI YQGKSG M S G drvpgk VIFET QSTHK 367
Cdd:cd00615 151 ---- EHPDAKA AVITN P TY Y G IC YN LRK I VEEAH hr GLPVLV D E A HGAHFR FHPI LPSSAA M A G ------ ADIVV QSTHK 220
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446943803 368 M L A A FS Q A S L IH I KG EY - DEETF NEA FMM H T STSPSY P I V AS IET A A AM L r GNP GK R L INRSV E R AL HF R K E VQR 441
Cdd:cd00615 221 T L P A LT Q G S M IH V KG DL v NPDRV NEA LNL H Q STSPSY L I L AS LDV A R AM M - ALE GK E L VEELI E L AL YA R Q E INK 294
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
1-713
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1620.58
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 1 MNIIAIMGPHGV Y YKDEPIKELE R ALQ SL GFQ I IWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCS E INQLNEYLPLY 80
Cdd:PRK15399 1 MNIIAIMGPHGV F YKDEPIKELE S ALQ AQ GFQ T IWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCS D INQLNEYLPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 81 AFINT N ST L DVSV H DMRMALWFFEYALG L AEDIA T RI H QYTNEYLDNITPPFTKALFTY A KEGKYTFCTPGHM A GT V YQK 160
Cdd:PRK15399 81 AFINT H ST M DVSV Q DMRMALWFFEYALG A AEDIA I RI R QYTNEYLDNITPPFTKALFTY V KEGKYTFCTPGHM G GT A YQK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 161 SP P GCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSY M VTNGTSTSNKIVGMYAAPAGSTLLI 240
Cdd:PRK15399 161 SP V GCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSY I VTNGTSTSNKIVGMYAAPAGSTLLI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 241 DRNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIP K REFTRDSI AR KVA E T A QAQWPVHAVITNSTYDGLLYNT N WIKQ 320
Cdd:PRK15399 241 DRNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIP R REFTRDSI EE KVA A T T QAQWPVHAVITNSTYDGLLYNT D WIKQ 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 321 M LDVPSIHFDSAWVPYTHFHPIYQGKSGMSG D RVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTS 400
Cdd:PRK15399 321 T LDVPSIHFDSAWVPYTHFHPIYQGKSGMSG E RVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 401 PSYPIVAS I ETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESD S WFFDIWQPE E VDEAECWPV T PGE T WHGF T DAD 480
Cdd:PRK15399 401 PSYPIVAS V ETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESD G WFFDIWQPE N VDEAECWPV A PGE Q WHGF K DAD 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 481 D DHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAY 560
Cdd:PRK15399 481 A DHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAY 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIR Q HDLP E LMLRAF E VLPEMIMTPHQAWQRQIKGEVETVAL D QL 640
Cdd:PRK15399 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIR K HDLP G LMLRAF D VLPEMIMTPHQAWQRQIKGEVETVAL E QL 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446943803 641 P GRVSANMILPYPPGVPLLMPGE R IT QQ SRAVLDFLLMLCSIGQHYPGFETDIHGAKR N EDGVY Q VRVLK H A C 713
Cdd:PRK15399 641 V GRVSANMILPYPPGVPLLMPGE M IT EE SRAVLDFLLMLCSIGQHYPGFETDIHGAKR D EDGVY R VRVLK M A G 713
PRK15400
PRK15400 lysine decarboxylase;
1-710
0e+00
lysine decarboxylase;
Pssm-ID: 185298 [Multi-domain]
Cd Length: 714
Bit Score: 1289.80
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 1 MN I IAI MGPH GVY Y K D EPI K EL E RAL QS L G FQI IW P QNSV DLLK F IE H N P R I CGVIFDWD E Y S L D LC S EI NQL NE Y LPLY 80
Cdd:PRK15400 1 MN V IAI LNHM GVY F K E EPI R EL H RAL ER L N FQI VY P NDRD DLLK L IE N N A R L CGVIFDWD K Y N L E LC E EI SKM NE N LPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 81 AF I NT N STLDVS VH D M R MALW FFEYALG L A E DIA TR I H Q Y T N EY L D N I T PP F TKALF T Y AK EGKYTFCTPGHM A GT VY QK 160
Cdd:PRK15400 81 AF A NT Y STLDVS LN D L R LQVS FFEYALG A A D DIA NK I K Q T T D EY I D T I L PP L TKALF K Y VR EGKYTFCTPGHM G GT AF QK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 161 SP P G C LFYDFFG G NT L K A D V SISV T ELGSLLDH T GPH L EAEEYIAR T F G A EQ SYMVTNGTST S NKIVGMY A APAGST L LI 240
Cdd:PRK15400 161 SP V G S LFYDFFG P NT M K S D I SISV S ELGSLLDH S GPH K EAEEYIAR V F N A DR SYMVTNGTST A NKIVGMY S APAGST V LI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 241 DRNCHKSL A HL L MMSDV V P LWLK PTRNA L GILGGIP KR EF TRDS IA RK V A ET AQ A Q WPVHAVITNSTYDGLLYNT NW IK Q 320
Cdd:PRK15400 241 DRNCHKSL T HL M MMSDV T P IYFR PTRNA Y GILGGIP QS EF QHAT IA KR V K ET PN A T WPVHAVITNSTYDGLLYNT DF IK K 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 321 M LDV P SIHFDSAWVPYT H F H PIY Q GK S GMSG D RV P GKVI F ETQSTHK M LAAFSQAS L IH I KG EYD EETFNEA F MMHT S TS 400
Cdd:PRK15400 321 T LDV K SIHFDSAWVPYT N F S PIY E GK C GMSG G RV E GKVI Y ETQSTHK L LAAFSQAS M IH V KG DVN EETFNEA Y MMHT T TS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 401 P S Y P IVAS I ETAAAM LR GN P GKRLIN R S V ERA LH FRKE VQ RLR E ESD S WFFD I WQP EEV D EA ECWP VTPGE TWHGF TDA D 480
Cdd:PRK15400 401 P H Y G IVAS T ETAAAM MK GN A GKRLIN G S I ERA IK FRKE IK RLR T ESD G WFFD V WQP DHI D TT ECWP LRSDS TWHGF KNI D 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 481 DD HM F LDP V KVT I LTPGM DEQ G N MS EE GIPA AL VAK F LDE R G V VVEKTGPYNLLFLFSIGIDKT R A MG LLR G LT E FKRA Y 560
Cdd:PRK15400 481 NE HM Y LDP I KVT L LTPGM KKD G T MS DF GIPA SI VAK Y LDE H G I VVEKTGPYNLLFLFSIGIDKT K A LS LLR A LT D FKRA F 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 561 DLNLRVKNMLP D LY A EDP D FY R NMRIQ D LAQ G IHKLI RQ H D LP E LM L RAFEVLP E M I MTP HQ A W Q RQIK G EV E T V A LD QL 640
Cdd:PRK15400 561 DLNLRVKNMLP S LY R EDP E FY E NMRIQ E LAQ N IHKLI VH H N LP D LM Y RAFEVLP T M V MTP YA A F Q KELH G MT E E V Y LD EM 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 641 P GRV S ANMILPYPPGVPL L MPGE R IT QQ SR A VL D FL L MLC S IG Q HYPGFETDIHGA K R NE DG V Y Q V R VLK 710
Cdd:PRK15400 641 V GRV N ANMILPYPPGVPL V MPGE M IT EE SR P VL E FL Q MLC E IG A HYPGFETDIHGA Y R QA DG R Y T V K VLK 710
OKR_DC_1
pfam01276 Orn/Lys/Arg decarboxylase, major domain;
130-545
0e+00
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain]
Cd Length: 417
Bit Score: 688.86
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 130 PP FT KALF T Y AKE G K YTF CT PGH MA G TVY QK S P P G CL FYDFFG G N T L KA DV S I SVT ELG S LLDH T G PHL EA EE Y I AR T FG 209
Cdd:pfam01276 1 PP LY KALF K Y VRR G N YTF HC PGH QG G AGF QK H P A G RF FYDFFG E N L L RI DV C I EDV ELG D LLDH E G AIK EA QK Y A AR V FG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 210 A EQ SY M V T NGTS T SNK I VGM YAAPA G S T L LIDRNCHKS LA H L LM M S DVV P LW L K P T RNA L GI L GGIP KR EF TRDSIARKV 289
Cdd:pfam01276 81 A DK SY F V V NGTS G SNK T VGM AVCTP G D T I LIDRNCHKS IH H A LM L S GAT P VY L E P S RNA Y GI I GGIP LH EF QEETLKEAI 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 290 AE TAQ A QW P VH AVITN S TYDG L LYN TNW I KQM L DVP S -- I H FDSAWV P Y TH F H PIY QGK S G M S G DRVP G KV IF E TQS T HK 367
Cdd:pfam01276 161 AE VPD A KG P RL AVITN P TYDG V LYN AKE I VDT L HHL S dp I L FDSAWV G Y EQ F I PIY ADA S P M G G ENEN G PG IF V TQS V HK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 368 M LAA F SQAS L IH I K GE -- YDEET FNEAFMMH TS TSPSYPI V AS IET AA A ML R GN P G K RL I N RS VERA LH FRK EVQ rlr EE 445
Cdd:pfam01276 241 L LAA L SQAS Y IH K K EG hi VNHDR FNEAFMMH AT TSPSYPI F AS LDV AA K ML E GN S G R RL W N EC VERA IE FRK AID --- TL 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 446 SDSW FF DI W Q PE E VD EA ECWP VT PGETWHGF TDAD D DHM FLDP V K V TILTPGMDE Q G NM SE E G I PA AL VAK F L D E R G V V V 525
Cdd:pfam01276 318 NNCE FF RP W N PE I VD GK ECWP FH PGETWHGF EGYA D NQY FLDP C K L TILTPGMDE D G EY SE F G V PA TI VAK W L R E N G I V P 397
410 420
....*....|....*....|
gi 446943803 526 EKT GPY N L LFLF SI G I D K T R 545
Cdd:pfam01276 398 EKT DLN N I LFLF TP G E D R T K 417
PRK15029
PRK15029 arginine decarboxylase; Provisional
19-710
0e+00
arginine decarboxylase; Provisional
Pssm-ID: 184989 [Multi-domain]
Cd Length: 755
Bit Score: 560.62
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 19 IKE L ER AL QSLGFQI I WPQNSV D LLKFIEH N PR I CGVI F DWDEYSL D LCSEIN QL ------- NEYL P LYAFINTNST L DV 91
Cdd:PRK15029 21 VER L AD AL SQQNVTV I KSTSFD D GFAILSS N EA I DCLM F SYQMEHP D EHQNVR QL igklher QQNV P VFLLGDREKA L AA 100
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 92 SVH D MRMALWF F EYA L GLAE D - IA T R IHQYTNE Y LDNIT PP FTK AL FT Y AKEGK Y TFCT PGH MA G TVYQ K S P P G CLFY D F 170
Cdd:PRK15029 101 MDR D LLELVDE F AWI L EDTA D f IA G R AVAAMTR Y RQQLL PP LFS AL MK Y SDIHE Y SWAA PGH QG G VGFT K T P A G RFYH D Y 180
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 171 F G G N TLKA D VS I SV T E LGSLLDHTG PHL E A E E Y I AR T FGA EQ S YM V TN GTS T SN KIVGMYAAPAGSTLLI DRNCHKS LAH 250
Cdd:PRK15029 181 Y G E N LFRT D MG I ER T S LGSLLDHTG AFG E S E K Y A AR V FGA DR S WS V VV GTS G SN RTIMQACMTDNDVVVV DRNCHKS IEQ 260
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 251 L L MMSDVV P LWLK P T RN AL GI L G G I PKR E FTRDSIAR K VA E ----- TAQA Q W P VHA V I TN S TYDG LL YN TNWIKQM L D -- 323
Cdd:PRK15029 261 G L ILTGAK P VYMV P S RN RY GI I G P I YPQ E MQPETLQK K IS E spltk DKAG Q K P SYC V V TN C TYDG VC YN AKEAQDL L E kt 340
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 324 VPSI HFD S AW VP Y TH F H PIY QGKSG M S G DRV -- P G KVI F E T Q STHK M L A A F SQAS L IH I --- K G EYDEET FN E A F MMH TS 398
Cdd:PRK15029 341 SDRL HFD E AW YG Y AR F N PIY ADHYA M R G EPG dh N G PTV F A T H STHK L L N A L SQAS Y IH V reg R G AINFSR FN Q A Y MMH AT 420
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 399 TSP S Y P I V AS IET A AA M LR GN P G KR L INRSVER A LH FR KEVQ RL R --- EESD SWFF DI W QP E E V ---------------- 459
Cdd:PRK15029 421 TSP L Y A I C AS NDV A VS M MD GN S G LS L TQEVIDE A VD FR QAMA RL Y kef TADG SWFF KP W NK E V V tdpqtgktydfadapt 500
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 460 ---- DEAE CW PVT PGE T WHGF T D AD D DHMF LDP V KV T IL T PGM D E Q G NMS E E G I PAALV AKF L DER G V V VEK T GPYNLL F 535
Cdd:PRK15029 501 kllt TVQD CW VMH PGE S WHGF K D LP D NWSM LDP I KV S IL A PGM G E D G ELE E T G V PAALV TAW L GRH G I V PTR T TDFQIM F 580
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 536 LFS I G IDKTRAMG L LRG L TE FKR A YD L N LRVKNML P D L YAED PD F Y R NM R I Q DL AQGIHKLIRQHDLPELMLR A FEV LP E 615
Cdd:PRK15029 581 LFS M G VTRGKWGT L VNT L CS FKR H YD A N TPLAQVM P E L VEQY PD T Y A NM G I H DL GDTMFAWLKENNPGARLNE A YSG LP V 660
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 616 MIM TP HQ A WQRQIKGE VE T V ALDQ LPGR VS AN MIL PYPPG V P L L MP GE RITQQSRAVLDF L LM L C S IGQ H Y PGFE TDIH G 695
Cdd:PRK15029 661 AEI TP RE A YNAIVDNN VE L V SIEN LPGR IA AN SVI PYPPG I P M L LS GE NFGDKNSPQVSY L RS L Q S WDH H F PGFE HETE G 740
730
....*....|....*
gi 446943803 696 AKR n E DG V Y Q V RVL K 710
Cdd:PRK15029 741 TEI - I DG I Y H V MCV K 754
LdcC
COG1982 Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
124-711
0e+00
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain]
Cd Length: 486
Bit Score: 558.57
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 124 Y L D NITP P FTK AL FT YA KE G KYT F CT PGH MA G TVY qkspp G CL FYDFFG G N TLKA D VSI s VTE L GS L L D HT G PHL EA E E Y 203
Cdd:COG1982 1 Y M D QLLT P LFD AL KK YA ER G PVS F HV PGH KG G RGF ----- G RE FYDFFG E N VFRL D LTE - LPG L DD L H D PE G VIK EA Q E L 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 204 I A RT FGA EQSYMVT NGTS TS NK IVGMYAAPA G STL L ID RNCHKS LA H L L MM S DVV P LW L K P T - R N A LGI L GGI PKREFTR 282
Cdd:COG1982 75 A A EA FGA DRTFFLV NGTS SG NK AMILAVCGP G DKV L VP RNCHKS VI H G L IL S GAI P VY L N P E i D N E LGI I GGI TPEAVEE 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 283 DS I arkvaeta QAQWPVHAV ITN S TY D G LL Y NTNW I KQMLD -- VPSIHF D S A WVPYTH FHP IYQ g K S G M S gdrvp GKVIF 360
Cdd:COG1982 155 AL I -------- EHPDAKAVL ITN P TY Y G VC Y DLKA I AELAH eh GIPVLV D E A HGAHFG FHP DLP - R S A M E ----- AGADL 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 361 ET QSTHK M L A A FS Q A S LI H I KG EY - D E E TF NEA F M MHT STSPSY PIV AS IET A AAMLR G N p G KR L INRSV E R A LHF RKE V 439
Cdd:COG1982 221 VV QSTHK T L G A LT Q S S ML H V KG GR v D H E RV NEA L M LLQ STSPSY LLM AS LDV A RRQMA G E - G EE L LDEAL E L A IEA RKE I 299
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 440 QRL reesds WFFDIWQ PE EVD eaecwpvtpgetwhgftda DDDHMF LDP V K V TI LT PG M deqgnmsee GI PAAL VA KF L D 519
Cdd:COG1982 300 NKI ------ PGLYVFG PE DLG ------------------- APGVYD LDP T K L TI DV PG L --------- GI SGYE VA EY L R 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 520 E R - G VV VE KTGP YN L LFL F S I G ID K TRAMG L LRG L T E F KR A YD L N LRVKNM LP dlyaedpdfyrnmriqdlaqgihklir 598
Cdd:COG1982 346 E E y G IQ VE LADL YN I LFL L S L G DT K EDIER L VAA L K E L KR L YD K N APLEEV LP --------------------------- 398
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 599 qhdlpelml R AF EV LPE MI M T P HQ A WQ rqik G E V E T V A L DQLP GR VS A N M IL PYPPG V PLLMPGERIT Q qsr A V L D F L LM 678
Cdd:COG1982 399 --------- L AF PP LPE LV M S P RE A FF ---- A E T E L V P L EEAV GR IA A E M VI PYPPG I PLLMPGERIT E --- E V I D Y L RA 462
570 580 590
....*....|....*....|....*....|...
gi 446943803 679 L CSI G QHY PGFE tdihgakrn EDGVYQV RV L K H 711
Cdd:COG1982 463 L EEA G GRF PGFE --------- DPELRTI RV V K E 486
Orn_deC_like
cd00615 Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
131-441
3.07e-131
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain]
Cd Length: 294
Bit Score: 389.69
E-value: 3.07e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 131 P FTK AL FT YAK E G KYT F CT PGH MA G TVYQ KS ppgcl FY D F F G G N TL KADV SI s V T E L GS LLD H TGP HL EA E E YI AR T FGA 210
Cdd:cd00615 1 P LFE AL KE YAK R G IIS F HV PGH KG G RGFR KS ----- FY E F Y G E N LF KADV TE - L T G L DD LLD P TGP IK EA Q E LA AR A FGA 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 211 EQSYMVT NGTS T SNK I V GMYAAPA G STL LIDRNCHKS LAHL L MM S DV VP LW LKP T RN A - L GI L GGIP KRE F TRDS I arkv 289
Cdd:cd00615 75 KHTFFLV NGTS S SNK A V ILAVCGP G DKI LIDRNCHKS VING L VL S GA VP VY LKP E RN P y Y GI A GGIP PET F KKAL I ---- 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 290 aeta QAQWPVH AVITN S TY D G LL YN TNW I KQMLD -- VPSIHF D S A WVPYTH FHPI YQGKSG M S G drvpgk VIFET QSTHK 367
Cdd:cd00615 151 ---- EHPDAKA AVITN P TY Y G IC YN LRK I VEEAH hr GLPVLV D E A HGAHFR FHPI LPSSAA M A G ------ ADIVV QSTHK 220
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446943803 368 M L A A FS Q A S L IH I KG EY - DEETF NEA FMM H T STSPSY P I V AS IET A A AM L r GNP GK R L INRSV E R AL HF R K E VQR 441
Cdd:cd00615 221 T L P A LT Q G S M IH V KG DL v NPDRV NEA LNL H Q STSPSY L I L AS LDV A R AM M - ALE GK E L VEELI E L AL YA R Q E INK 294
PRK13578
PRK13578 ornithine decarboxylase; Provisional
123-711
5.60e-122
ornithine decarboxylase; Provisional
Pssm-ID: 237434 [Multi-domain]
Cd Length: 720
Bit Score: 380.85
E-value: 5.60e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 123 E Y LD N IT PPF TKA L FT Y AKE G KY TF CT PGH MA G TVYQ K S P P G CL FYDFFG G N TLK AD VSISVTE LG S LL D H T G PHLE A EE 202
Cdd:PRK13578 102 K Y EE N LL PPF FDT L TD Y VEM G NS TF DC PGH QG G QFFR K H P A G RQ FYDFFG E N LFR AD MCNADVK LG D LL I H E G AAKD A QK 181
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 203 YI A RT F G A EQS Y M V T NGTS T SNK I V GMYAAPA G STL L I DRN C HKS LA H - L L MMSDVV P LW L KPT RN AL G IL GGI PKRE F T 281
Cdd:PRK13578 182 HA A KV F N A DKT Y F V L NGTS A SNK V V TNALLTP G DLV L F DRN N HKS NH H g A L IQAGAT P VY L ETA RN PF G FI GGI DAHC F D 261
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 282 ---- R DS I ARKVA E T A QAQW P VH - AVI TNS TYDG LL YN T nwi K Q ML D ----- VPS I H FDSAWV P Y TH F H P IYQGK S GM -- 349
Cdd:PRK13578 262 eeyl R EQ I REVAP E R A DEAR P FR l AVI QLG TYDG TI YN A --- R Q VV D kighl CDY I L FDSAWV G Y EQ F I P MMADC S PL ll 338
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 350 --- SG D rv PG kv IF E TQS T HK ML A A FSQ A S L I ----- HIKG E -- Y - DEETF N E AFM M H T STSP S YP IV A SIETA A A M LR G 418
Cdd:PRK13578 339 eln EN D -- PG -- IF V TQS V HK QQ A G FSQ T S Q I hkkdn HIKG Q ar Y c PHKRL N N AFM L H A STSP F YP LF A ALDVN A K M HE G 414
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 419 NP G K RL INRS V ERALHF RK EV ---- QRL R ---- EES D S wff DI WQ -- P E E V -- DEAECWPVT PGE T WHGF TDADD D HM F L 486
Cdd:PRK13578 415 ES G R RL WMEC V KLGIEA RK LI larc KLI R pfip PVV D G --- KP WQ dy P T E Q ia SDLRFFSFE PGE K WHGF EGYAE D QY F V 491
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 487 DP V K VTIL TPG M D - E Q G NMSEE GIPA ALV A KF L D E R G V V V EK TGPYNL LFL FSIGI D KTRAMG L LRG L TE F KRAYDLNLR 565
Cdd:PRK13578 492 DP C K LLLT TPG I D a E T G EYEDF GIPA TIL A NY L R E N G I V P EK CDLNSI LFL LTPAE D MAKLQQ L VAM L AR F EKHIEDDAP 571
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 566 VKNM LP DL Y AED P DF YR NMRIQD L A Q GI H K L IRQ HD LPE L --- M L R A f EVL P EMI M T P HQ A WQRQ I K GEVE T V A L DQLP G 642
Cdd:PRK13578 572 LAEV LP SV Y KKN P ER YR GYTLRQ L C Q EM H D L YVS HD VKQ L qke M F R K - ASF P RVV M N P QD A NIAY I R GEVE L V R L SEAE G 650
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446943803 643 R VS A NMI LPYPPGV PLLM PGE RITQ qsr AV LDFL L M L CSIGQHY PGF ETDIH G -- AKRNE DG VYQVR -- VLK H 711
Cdd:PRK13578 651 R IA A EGA LPYPPGV LCVV PGE IWGG --- AV QRYF L A L EEGINLL PGF APELQ G vy LETDA DG RKRAY gy VLK P 720
OKR_DC_1_C
pfam03711 Orn/Lys/Arg decarboxylase, C-terminal domain;
570-701
9.49e-70
Orn/Lys/Arg decarboxylase, C-terminal domain;
Pssm-ID: 461020 [Multi-domain]
Cd Length: 132
Bit Score: 223.94
E-value: 9.49e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 570 LP D L Y A ED P DF Y RN M RIQ DL A Q GI H KLI R QHDLPE L MLR AF EV LPE MI MTP HQ A W Q RQIK GEVE T V A LD Q L P GR VS A NMI 649
Cdd:pfam03711 1 LP E L V A AY P ER Y EG M GLR DL C Q EM H DFY R ENNVAR L QKE AF RS LPE PA MTP AE A Y Q ELVR GEVE L V P LD E L E GR IA A VGV 80
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 446943803 650 LPYPPG V PLLMPGER ITQQS R AV LD F LL M L CSIGQHY PGFET D IHG AK R N ED 701
Cdd:pfam03711 81 LPYPPG I PLLMPGER FGEEN R PI LD Y LL A L EEFDNRF PGFET E IHG VY R E ED 132
OKR_DC_1_N
pfam03709 Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is ...
14-124
3.37e-36
Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure.
Pssm-ID: 427454 [Multi-domain]
Cd Length: 111
Bit Score: 131.98
E-value: 3.37e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446943803 14 Y K DEPIK EL ER AL QSL G FQIIWPQNSV DLL KF IE HNPR I CG V IFD WD E Y SLD L CS EI NQL N EY LP LYAFIN T NSTL DV SV 93
Cdd:pfam03709 1 L K IAASR EL AE AL ERT G REVVDATSTD DLL AA IE TFTD I AA V VLS WD D Y AAG L LD EI RRR N FD LP VFLLGE T HTSE DV PA 80
90 100 110
....*....|....*....|....*....|.
gi 446943803 94 HDM R MALW F F E Y A LGLA E D IA TR I HQYTNE Y 124
Cdd:pfam03709 81 DVL R LIDG F I E L A EDTP E F IA RQ I EAAAKK Y 111
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
