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Conserved domains on  [gi|446880627|ref|WP_000957883|]
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MULTISPECIES: phosphoenolpyruvate--protein phosphotransferase [Salmonella]

Protein Classification

phosphoenolpyruvate--protein phosphotransferase( domain architecture ID 11485177)

phosphoenolpyruvate--protein phosphotransferase transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11061 PRK11061
phosphoenolpyruvate--protein phosphotransferase;
1-747 0e+00

phosphoenolpyruvate--protein phosphotransferase;


:

Pssm-ID: 182937 [Multi-domain]  Cd Length: 748  Bit Score: 1530.31  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627   1 MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVALAFDEGIVGLVGR 80
Cdd:PRK11061   1 MLTRLREIVEKVASAPRLNEALDILVTETCLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  81 LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVT 160
Cdd:PRK11061  81 LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIYRRQLLGVLVVQQRELRQFDESEESFLVTLATQLAAILSQSQLT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 161 ALFGQYRQTRIRALPAAPGVAIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAA 240
Cdd:PRK11061 161 ALFGQYRQTRIRALPASPGVAIAEGWQDATQPLLEQVYPASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 241 IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLDDSVQGPNAWP 320
Cdd:PRK11061 241 IFDLYSHLLNDPRLRRELFAEVDKGSVAEWAVKQVIEKFAEQFAALSDNYLRERAGDLRALGQRLLFHLDDSEQGPNAWP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 321 ERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPV 400
Cdd:PRK11061 321 ERFILVADELTATLLAELPQDRLAGVVVRDGAANSHAAILVRALGIPTVMGADIQPSLLHQRLLIVDGYRGELLVDPEPV 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 401 LIQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV 480
Cdd:PRK11061 401 LLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSAEHEEKLGSRVDGVGLYRTEIPFMLQSGFPSEEEQV 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 481 AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT 560
Cdd:PRK11061 481 AQYQGMLQMFPDKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 561 SIDEVDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIY 640
Cdd:PRK11061 561 SIDEVDEARRLIDRAGREVEEMLGYEIPKPRIGIMIEVPSMVFMLPHLASRVDFISVGTNDLTQYLLAVDRNNTRVASLY 640
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 641 DSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLE 720
Cdd:PRK11061 641 DSLHPAMLRALKMIADEAEQHGLPVSLCGEMAGDPMGALLLIGLGYRHLSMNGRSVARVKYLLRHIDLAEAENLAQRSLE 720
                        730       740
                 ....*....|....*....|....*..
gi 446880627 721 AQMATEVRHQVAAFMERRGMGGLIRGG 747
Cdd:PRK11061 721 AQLATEVRHQVAAFMERRGLGGLIRGG 747
 
Name Accession Description Interval E-value
PRK11061 PRK11061
phosphoenolpyruvate--protein phosphotransferase;
1-747 0e+00

phosphoenolpyruvate--protein phosphotransferase;


Pssm-ID: 182937 [Multi-domain]  Cd Length: 748  Bit Score: 1530.31  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627   1 MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVALAFDEGIVGLVGR 80
Cdd:PRK11061   1 MLTRLREIVEKVASAPRLNEALDILVTETCLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  81 LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVT 160
Cdd:PRK11061  81 LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIYRRQLLGVLVVQQRELRQFDESEESFLVTLATQLAAILSQSQLT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 161 ALFGQYRQTRIRALPAAPGVAIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAA 240
Cdd:PRK11061 161 ALFGQYRQTRIRALPASPGVAIAEGWQDATQPLLEQVYPASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 241 IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLDDSVQGPNAWP 320
Cdd:PRK11061 241 IFDLYSHLLNDPRLRRELFAEVDKGSVAEWAVKQVIEKFAEQFAALSDNYLRERAGDLRALGQRLLFHLDDSEQGPNAWP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 321 ERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPV 400
Cdd:PRK11061 321 ERFILVADELTATLLAELPQDRLAGVVVRDGAANSHAAILVRALGIPTVMGADIQPSLLHQRLLIVDGYRGELLVDPEPV 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 401 LIQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV 480
Cdd:PRK11061 401 LLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSAEHEEKLGSRVDGVGLYRTEIPFMLQSGFPSEEEQV 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 481 AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT 560
Cdd:PRK11061 481 AQYQGMLQMFPDKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 561 SIDEVDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIY 640
Cdd:PRK11061 561 SIDEVDEARRLIDRAGREVEEMLGYEIPKPRIGIMIEVPSMVFMLPHLASRVDFISVGTNDLTQYLLAVDRNNTRVASLY 640
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 641 DSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLE 720
Cdd:PRK11061 641 DSLHPAMLRALKMIADEAEQHGLPVSLCGEMAGDPMGALLLIGLGYRHLSMNGRSVARVKYLLRHIDLAEAENLAQRSLE 720
                        730       740
                 ....*....|....*....|....*..
gi 446880627 721 AQMATEVRHQVAAFMERRGMGGLIRGG 747
Cdd:PRK11061 721 AQLATEVRHQVAAFMERRGLGGLIRGG 747
PtsA COG1080
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate ...
171-738 0e+00

Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism];


Pssm-ID: 440698 [Multi-domain]  Cd Length: 571  Bit Score: 576.64  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 171 IRALPAAPGVAIATGW--QDATMPLMEQVYEASTLDTslERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHL 248
Cdd:COG1080    1 LKGIAASPGIAIGKAFllREEDLEVPEYTISPEDVEA--EIARLEAALAKAREELEALREKAPEDLGEEEAAIFDAHLLL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 249 LSDARLRRELFAEVDKGAV-AEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHL-DDSVQGPNAWPERFILV 326
Cdd:COG1080   79 LEDPELIEEVEELIREGRYnAEWALKEVIEELAAQFEALDDEYLRERAADIRDVGRRVLRNLlGVEAPDLSDLPEPVILV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 327 ADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGA-DIQPSVLHRRTLVVDGYRGELLVDPEPVLIQEY 405
Cdd:COG1080  159 AHDLTPSDTAQLDPSRVAGFVTDLGGRTSHTAILARSLGIPAVVGLgDALLLVKDGDLVIVDGDAGVVIVNPDEETLAEY 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 406 QRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQG 485
Cdd:COG1080  239 RERQAEYAAERAELARLRDLPAVTLDGVRVELAANIGLPEDAAAALENGAEGVGLFRTEFLFMDRDDLPTEEEQFEAYRA 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 486 MLQMFNDKPVTLRTLDVGADKQLPYMPIS-EENPCLGWRGIRITLDQPEIFLIQVRAMLRAnAATGNLSILLPMVTSIDE 564
Cdd:COG1080  319 VAEAMGGRPVTIRTLDIGGDKPLPYLPLPkEENPFLGLRAIRLCLDRPELFRTQLRAILRA-SAHGNLRIMFPMISSVEE 397
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 565 VDEARRLIERAGREV-EEMIGYAiPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIYDSL 643
Cdd:COG1080  398 LRQAKALLEEAKAELrAEGIPFD-EDIPVGIMIEVPAAALIADQLAKEVDFFSIGTNDLIQYTLAVDRGNEKVAYLYDPL 476
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 644 HPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLEAQM 723
Cdd:COG1080  477 HPAVLRLIKMVIDAAHKAGKPVGVCGEMAGDPLATPLLLGLGLDELSMSPSSIPAVKAIIRRLDLAEARALAEKALALDT 556
                        570
                 ....*....|....*
gi 446880627 724 ATEVRHQVAAFMERR 738
Cdd:COG1080  557 AEEVRALLEEFLAEL 571
PEP-utilizers_C pfam02896
PEP-utilizing enzyme, PEP-binding domain; This entry represents a TIM barrel domain found at ...
416-708 7.81e-141

PEP-utilizing enzyme, PEP-binding domain; This entry represents a TIM barrel domain found at the C terminus of a number of PEP (phosphoenolpyruvate)-utilizing proteins. In PPDK (Pyruvate phosphate dikinase) this C-terminal domain has been shown to be a PEP-binding domain.


Pssm-ID: 397163 [Multi-domain]  Cd Length: 292  Bit Score: 415.17  E-value: 7.81e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  416 SRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPV 495
Cdd:pfam02896   1 KAELGKLKDLPAPTADGTKIKVAANIGTPDDAEAALANGAEGIGLYRTEFLFMDRDELPTEDEQFEAYKGVLEAMNGRPV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  496 TLRTLDVGADKQLPYMPISEE-NPCLGWRGIRITLDQPEIFLIQVRAMLRAnAATGNLSILLPMVTSIDEVDEARRLIER 574
Cdd:pfam02896  81 TVRTLDIGGDKELPYLEEPEEmNPFLGWRGIRIGLDRPELFRTQLRAILRA-SAFGNLRIMFPMVASVEELREAKAIIEE 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  575 AGREVEEMIGYAiPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIYDSLHPAMLRALSMI 654
Cdd:pfam02896 160 VKEELDAEVGFD-KDIKVGIMIEVPSAALLADQLAKEVDFFSIGTNDLTQYTLAVDRDNERVAYLYDPLHPAVLRLIKEV 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 446880627  655 AQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDF 708
Cdd:pfam02896 239 IRAAHRHGKWVGICGEMAGDPSAVPLLVGLGLDEFSMSPDSVPRARALLAQIDR 292
PTS_I_fam TIGR01417
phosphoenolpyruvate-protein phosphotransferase; This model recognizes a distinct clade of ...
171-728 4.04e-117

phosphoenolpyruvate-protein phosphotransferase; This model recognizes a distinct clade of phophoenolpyruvate (PEP)-dependent enzymes. Most members are known or deduced to function as the phosphoenolpyruvate-protein phosphotransferase (or enzyme I) of PTS sugar transport systems. However, some species with both a member of this family and a homolog of the phosphocarrier protein HPr lack a IIC component able to serve as a permease. An HPr homolog designated NPr has been implicated in the regulation of nitrogen assimilation, which demonstrates that not all phosphotransferase system components are associated directly with PTS transport.


Pssm-ID: 273611 [Multi-domain]  Cd Length: 565  Bit Score: 364.11  E-value: 4.04e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  171 IRALPAAPGVAIATGW--QDATMPLMEQVYEASTLDTslERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHL 248
Cdd:TIGR01417   1 ISGIGVSPGIAIGKALllKKPDLVIDRKKISASQVDQ--EISRFLSARAKAKEDLETIKTKAGKTFGQEKAAIFEAHILI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  249 LSDARLRRELFAEVDKGAV-AEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHL-DDSVQGPNAWPERFILV 326
Cdd:TIGR01417  79 LEDPELTEEVIELIKKDHKnAEFAAHEVFEGQAKSLEEMDDEYLKERAADIRDIGNRLLGHLlGVKISDLSEIQDEVILV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  327 ADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMG-ADIQPSVLHRRTLVVDGYRGELLVDPEPVLIQEY 405
Cdd:TIGR01417 159 AEDLTPSETAQLNLKYVKGFLTDAGGKTSHTAIMARSLEIPAIVGtKSVTSQVKNGDTVIIDGVKGIVIFNPSSETIDKY 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  406 QRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQG 485
Cdd:TIGR01417 239 EAKQEAVSSEKAELAKLKDKPAITLDGHQVELAANIGTVDDVEGAERNGGEGIGLFRTEFLYMSRDQLPTEEEQFAAYKT 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  486 MLQMFNDKPVTLRTLDVGADKQLPYMPI-SEENPCLGWRGIRITLDQPEIFLIQVRAMLRAnAATGNLSILLPMVTSIDE 564
Cdd:TIGR01417 319 VLEAMESDAVIVRTLDIGGDKELPYLNFpKEENPFLGYRAIRLALEREEILRTQLRAILRA-SAYGKLRIMFPMVATVEE 397
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  565 VDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIYDSLH 644
Cdd:TIGR01417 398 IRAVKQELEEEKQELNDEGKAFDENIEVGVMIEIPSAALIADHLAKEVDFFSIGTNDLTQYTLAVDRGNDLISNLYQPYN 477
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  645 PAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLEAQMA 724
Cdd:TIGR01417 478 PAVLRLIKLVIDAAKAEGIWVGMCGEMAGDERAIPLLLGLGLRELSMSASSILRIKMIIRKLNIEECKSLAEKALAQPTT 557

                  ....
gi 446880627  725 TEVR 728
Cdd:TIGR01417 558 EEVH 561
GAF smart00065
Domain present in phytochromes and cGMP-specific phosphodiesterases; Mutations within these ...
17-158 1.08e-21

Domain present in phytochromes and cGMP-specific phosphodiesterases; Mutations within these domains in PDE6B result in autosomal recessive inheritance of retinitis pigmentosa.


Pssm-ID: 214500 [Multi-domain]  Cd Length: 149  Bit Score: 92.06  E-value: 1.08e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627    17 RLNEALNILVTDICLAMDTEVCSVYLADHD-RRCYYLMATRGLKKPRGRtVALAFDEGIVGLVGRLAEPINLADAQKHPS 95
Cdd:smart00065   1 DLEELLQTILEELRQLLGADRVLIYLVDENdRGELVLVAADGLTLPTLG-IRFPLDEGLAGRVAETGRPLNIPDVEADPL 79
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446880627    96 FKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQREL-RQYDESEESFLVTLATQMAAILSQSQ 158
Cdd:smart00065  80 FAEDLLGRYQGVRSFLAVPLVADGELVGVLALHNKKSpRPFTEEDEELLQALANQLAIALANAQ 143
 
Name Accession Description Interval E-value
PRK11061 PRK11061
phosphoenolpyruvate--protein phosphotransferase;
1-747 0e+00

phosphoenolpyruvate--protein phosphotransferase;


Pssm-ID: 182937 [Multi-domain]  Cd Length: 748  Bit Score: 1530.31  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627   1 MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVALAFDEGIVGLVGR 80
Cdd:PRK11061   1 MLTRLREIVEKVASAPRLNEALDILVTETCLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  81 LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVT 160
Cdd:PRK11061  81 LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIYRRQLLGVLVVQQRELRQFDESEESFLVTLATQLAAILSQSQLT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 161 ALFGQYRQTRIRALPAAPGVAIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAA 240
Cdd:PRK11061 161 ALFGQYRQTRIRALPASPGVAIAEGWQDATQPLLEQVYPASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 241 IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLDDSVQGPNAWP 320
Cdd:PRK11061 241 IFDLYSHLLNDPRLRRELFAEVDKGSVAEWAVKQVIEKFAEQFAALSDNYLRERAGDLRALGQRLLFHLDDSEQGPNAWP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 321 ERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPV 400
Cdd:PRK11061 321 ERFILVADELTATLLAELPQDRLAGVVVRDGAANSHAAILVRALGIPTVMGADIQPSLLHQRLLIVDGYRGELLVDPEPV 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 401 LIQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV 480
Cdd:PRK11061 401 LLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSAEHEEKLGSRVDGVGLYRTEIPFMLQSGFPSEEEQV 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 481 AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT 560
Cdd:PRK11061 481 AQYQGMLQMFPDKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 561 SIDEVDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIY 640
Cdd:PRK11061 561 SIDEVDEARRLIDRAGREVEEMLGYEIPKPRIGIMIEVPSMVFMLPHLASRVDFISVGTNDLTQYLLAVDRNNTRVASLY 640
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 641 DSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLE 720
Cdd:PRK11061 641 DSLHPAMLRALKMIADEAEQHGLPVSLCGEMAGDPMGALLLIGLGYRHLSMNGRSVARVKYLLRHIDLAEAENLAQRSLE 720
                        730       740
                 ....*....|....*....|....*..
gi 446880627 721 AQMATEVRHQVAAFMERRGMGGLIRGG 747
Cdd:PRK11061 721 AQLATEVRHQVAAFMERRGLGGLIRGG 747
PtsA COG1080
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate ...
171-738 0e+00

Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism];


Pssm-ID: 440698 [Multi-domain]  Cd Length: 571  Bit Score: 576.64  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 171 IRALPAAPGVAIATGW--QDATMPLMEQVYEASTLDTslERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHL 248
Cdd:COG1080    1 LKGIAASPGIAIGKAFllREEDLEVPEYTISPEDVEA--EIARLEAALAKAREELEALREKAPEDLGEEEAAIFDAHLLL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 249 LSDARLRRELFAEVDKGAV-AEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHL-DDSVQGPNAWPERFILV 326
Cdd:COG1080   79 LEDPELIEEVEELIREGRYnAEWALKEVIEELAAQFEALDDEYLRERAADIRDVGRRVLRNLlGVEAPDLSDLPEPVILV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 327 ADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGA-DIQPSVLHRRTLVVDGYRGELLVDPEPVLIQEY 405
Cdd:COG1080  159 AHDLTPSDTAQLDPSRVAGFVTDLGGRTSHTAILARSLGIPAVVGLgDALLLVKDGDLVIVDGDAGVVIVNPDEETLAEY 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 406 QRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQG 485
Cdd:COG1080  239 RERQAEYAAERAELARLRDLPAVTLDGVRVELAANIGLPEDAAAALENGAEGVGLFRTEFLFMDRDDLPTEEEQFEAYRA 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 486 MLQMFNDKPVTLRTLDVGADKQLPYMPIS-EENPCLGWRGIRITLDQPEIFLIQVRAMLRAnAATGNLSILLPMVTSIDE 564
Cdd:COG1080  319 VAEAMGGRPVTIRTLDIGGDKPLPYLPLPkEENPFLGLRAIRLCLDRPELFRTQLRAILRA-SAHGNLRIMFPMISSVEE 397
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 565 VDEARRLIERAGREV-EEMIGYAiPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIYDSL 643
Cdd:COG1080  398 LRQAKALLEEAKAELrAEGIPFD-EDIPVGIMIEVPAAALIADQLAKEVDFFSIGTNDLIQYTLAVDRGNEKVAYLYDPL 476
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 644 HPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLEAQM 723
Cdd:COG1080  477 HPAVLRLIKMVIDAAHKAGKPVGVCGEMAGDPLATPLLLGLGLDELSMSPSSIPAVKAIIRRLDLAEARALAEKALALDT 556
                        570
                 ....*....|....*
gi 446880627 724 ATEVRHQVAAFMERR 738
Cdd:COG1080  557 AEEVRALLEEFLAEL 571
PEP-utilizers_C pfam02896
PEP-utilizing enzyme, PEP-binding domain; This entry represents a TIM barrel domain found at ...
416-708 7.81e-141

PEP-utilizing enzyme, PEP-binding domain; This entry represents a TIM barrel domain found at the C terminus of a number of PEP (phosphoenolpyruvate)-utilizing proteins. In PPDK (Pyruvate phosphate dikinase) this C-terminal domain has been shown to be a PEP-binding domain.


Pssm-ID: 397163 [Multi-domain]  Cd Length: 292  Bit Score: 415.17  E-value: 7.81e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  416 SRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPV 495
Cdd:pfam02896   1 KAELGKLKDLPAPTADGTKIKVAANIGTPDDAEAALANGAEGIGLYRTEFLFMDRDELPTEDEQFEAYKGVLEAMNGRPV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  496 TLRTLDVGADKQLPYMPISEE-NPCLGWRGIRITLDQPEIFLIQVRAMLRAnAATGNLSILLPMVTSIDEVDEARRLIER 574
Cdd:pfam02896  81 TVRTLDIGGDKELPYLEEPEEmNPFLGWRGIRIGLDRPELFRTQLRAILRA-SAFGNLRIMFPMVASVEELREAKAIIEE 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  575 AGREVEEMIGYAiPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIYDSLHPAMLRALSMI 654
Cdd:pfam02896 160 VKEELDAEVGFD-KDIKVGIMIEVPSAALLADQLAKEVDFFSIGTNDLTQYTLAVDRDNERVAYLYDPLHPAVLRLIKEV 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 446880627  655 AQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDF 708
Cdd:pfam02896 239 IRAAHRHGKWVGICGEMAGDPSAVPLLVGLGLDEFSMSPDSVPRARALLAQIDR 292
PTS_I_fam TIGR01417
phosphoenolpyruvate-protein phosphotransferase; This model recognizes a distinct clade of ...
171-728 4.04e-117

phosphoenolpyruvate-protein phosphotransferase; This model recognizes a distinct clade of phophoenolpyruvate (PEP)-dependent enzymes. Most members are known or deduced to function as the phosphoenolpyruvate-protein phosphotransferase (or enzyme I) of PTS sugar transport systems. However, some species with both a member of this family and a homolog of the phosphocarrier protein HPr lack a IIC component able to serve as a permease. An HPr homolog designated NPr has been implicated in the regulation of nitrogen assimilation, which demonstrates that not all phosphotransferase system components are associated directly with PTS transport.


Pssm-ID: 273611 [Multi-domain]  Cd Length: 565  Bit Score: 364.11  E-value: 4.04e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  171 IRALPAAPGVAIATGW--QDATMPLMEQVYEASTLDTslERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHL 248
Cdd:TIGR01417   1 ISGIGVSPGIAIGKALllKKPDLVIDRKKISASQVDQ--EISRFLSARAKAKEDLETIKTKAGKTFGQEKAAIFEAHILI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  249 LSDARLRRELFAEVDKGAV-AEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHL-DDSVQGPNAWPERFILV 326
Cdd:TIGR01417  79 LEDPELTEEVIELIKKDHKnAEFAAHEVFEGQAKSLEEMDDEYLKERAADIRDIGNRLLGHLlGVKISDLSEIQDEVILV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  327 ADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMG-ADIQPSVLHRRTLVVDGYRGELLVDPEPVLIQEY 405
Cdd:TIGR01417 159 AEDLTPSETAQLNLKYVKGFLTDAGGKTSHTAIMARSLEIPAIVGtKSVTSQVKNGDTVIIDGVKGIVIFNPSSETIDKY 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  406 QRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQG 485
Cdd:TIGR01417 239 EAKQEAVSSEKAELAKLKDKPAITLDGHQVELAANIGTVDDVEGAERNGGEGIGLFRTEFLYMSRDQLPTEEEQFAAYKT 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  486 MLQMFNDKPVTLRTLDVGADKQLPYMPI-SEENPCLGWRGIRITLDQPEIFLIQVRAMLRAnAATGNLSILLPMVTSIDE 564
Cdd:TIGR01417 319 VLEAMESDAVIVRTLDIGGDKELPYLNFpKEENPFLGYRAIRLALEREEILRTQLRAILRA-SAYGKLRIMFPMVATVEE 397
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  565 VDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIYDSLH 644
Cdd:TIGR01417 398 IRAVKQELEEEKQELNDEGKAFDENIEVGVMIEIPSAALIADHLAKEVDFFSIGTNDLTQYTLAVDRGNDLISNLYQPYN 477
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  645 PAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLEAQMA 724
Cdd:TIGR01417 478 PAVLRLIKLVIDAAKAEGIWVGMCGEMAGDERAIPLLLGLGLRELSMSASSILRIKMIIRKLNIEECKSLAEKALAQPTT 557

                  ....
gi 446880627  725 TEVR 728
Cdd:TIGR01417 558 EEVH 561
PRK11177 PRK11177
phosphoenolpyruvate-protein phosphotransferase PtsI;
236-736 7.56e-111

phosphoenolpyruvate-protein phosphotransferase PtsI;


Pssm-ID: 183017 [Multi-domain]  Cd Length: 575  Bit Score: 348.15  E-value: 7.56e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 236 KETAAIFDLYSHLLSDARLRRELFAEV-DKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFH-LDDSV 313
Cdd:PRK11177  67 EEKEAIFEGHIMLLEDEELEQEIIALIkDKHMTADAAAHSVIEGQAKALEELDDEYLKERAADVRDIGKRLLKNiLGLKI 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 314 QGPNAWPERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGA-DIQPSVLHRRTLVVDGYRGE 392
Cdd:PRK11177 147 IDLSAIQEEVILVAADLTPSETAQLNLKKVLGFITDIGGRTSHTSIMARSLELPAIVGTgNITKQVKNGDYLILDAVNNQ 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 393 LLVDPEPVLIQEYQRL----ISEEIELSRLAeddvNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFM 468
Cdd:PRK11177 227 IYVNPTNEVIEELKAVqeqyASEKAELAKLK----DLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFM 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 469 LQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPI-SEENPCLGWRGIRITLDQPEIFLIQVRAMLRAnA 547
Cdd:PRK11177 303 DRDALPTEEEQFQAYKAVAEAMGSQAVIVRTMDIGGDKELPYMNLpKEENPFLGWRAIRIAMDRKEILHDQLRAILRA-S 381
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 548 ATGNLSILLPMVTSIDEVDEARRLIE------RA-GREVEEMIgyaipkpRIGIMLEVPSMVFMLPHLANRIDFISVGTN 620
Cdd:PRK11177 382 AFGKLRIMFPMIISVEEVRELKAEIEilkqelRDeGKAFDESI-------EIGVMVETPAAAVIARHLAKEVDFFSIGTN 454
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 621 DLTQYILAVDRNNTRVASIYDSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVK 700
Cdd:PRK11177 455 DLTQYTLAVDRGNELISHLYNPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIK 534
                        490       500       510
                 ....*....|....*....|....*....|....*.
gi 446880627 701 YLLRHIDFEDAQTLARRSLEAQMATEVRHQVAAFME 736
Cdd:PRK11177 535 KIIRNTNFEDAKALAEQALAQPTADELMTLVNKFIE 570
PtsP COG3605
Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms];
1-182 3.01e-66

Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms];


Pssm-ID: 442824 [Multi-domain]  Cd Length: 188  Bit Score: 217.46  E-value: 3.01e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627   1 MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVALAFDEGIVGLVGR 80
Cdd:COG3605    2 MLKALRRISEAVASALDLDEALDRIVRRIAEALGVDVCSIYLLDPDGGRLELRATEGLNPEAVGKVRLPLGEGLVGLVAE 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  81 LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVT 160
Cdd:COG3605   82 RGEPLNLADAASHPRFKYFPETGEEGFRSFLGVPIIRRGRVLGVLVVQSREPREFTEEEVEFLVTLAAQLAEAIANAELL 161
                        170       180
                 ....*....|....*....|....*.
gi 446880627 161 ALFGQYRQTRIRAL----PAAPGVAI 182
Cdd:COG3605  162 GELRAALAELSLAReeerEAAVEAAI 187
PEP_synth TIGR01418
phosphoenolpyruvate synthase; Also called pyruvate,water dikinase and PEP synthase. The member ...
342-699 2.41e-45

phosphoenolpyruvate synthase; Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes. [Energy metabolism, Glycolysis/gluconeogenesis]


Pssm-ID: 273612 [Multi-domain]  Cd Length: 786  Bit Score: 174.15  E-value: 2.41e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  342 RLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLV-VDGYRGELLVdpepvliqEYQRLISEEIElsrlae 420
Cdd:TIGR01418 403 RASAIVTNEGGMTCHAAIVARELGIPAVVGTGDATKTLKDGMEVtVDCAEGDTGY--------VYAGKLEHEVK------ 468
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  421 dDVNLPAQLKSGerIKVMLNAGlSPEHEEKLGSR-IDGIGLYRTEipFMLQSG----------FPSEEEQVAQ------- 482
Cdd:TIGR01418 469 -EVELSNMPVTA--TKIYMNVG-NPEVAFRFAALpNDGVGLARIE--FIILNWigkhplalidDDDLESVEKNeieelma 542
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  483 -----------YQGMLQM---FNDKPVTLRTLDVGAD--KQL----PYMPIsEENPCLGWRGIRITLDQ--PEIFLIQVR 540
Cdd:TIGR01418 543 gnprdffvdklAEGIAKVaaaFYPKPVIVRTSDFKSNeyRNLiggeEYEPD-EENPMLGWRGASRYYSEsyEEAFRLECR 621
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  541 AMLRANAATG--NLSILLPMVTSIDEVDEARRLIERAGREVEEmigyaiPKPRIGIMLEVPSMVFMLPHLANRIDFISVG 618
Cdd:TIGR01418 622 AIKRVREEMGltNVEVMIPFVRTPEEGKRALEIMAEEGLRRGK------NGLEVYVMCEVPSNALLADEFAKEFDGFSIG 695
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  619 TNDLTQYILAVDRNNTRVASIYDSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGD-PMCVAILIGLGYRHLSMNGRSVA 697
Cdd:TIGR01418 696 SNDLTQLTLGVDRDSGLVAHLFDERNPAVLRLIEMAIKAAKEHGKKVGICGQAPSDyPEVVEFLVEEGIDSISLNPDAVL 775

                  ..
gi 446880627  698 RV 699
Cdd:TIGR01418 776 RT 777
PRK06464 PRK06464
phosphoenolpyruvate synthase; Validated
342-721 2.38e-43

phosphoenolpyruvate synthase; Validated


Pssm-ID: 235809 [Multi-domain]  Cd Length: 795  Bit Score: 168.00  E-value: 2.38e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 342 RLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLV----VDGYRGelLVdpepvliqeYQRLISEEIELSR 417
Cdd:PRK06464 404 RASAIVTNRGGRTCHAAIIARELGIPAVVGTGNATEVLKDGQEVtvscAEGDTG--YV---------YEGLLEFEVEEVS 472
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 418 LAEddvnLPAQlksgeRIKVMLNAGlSPEHEEKLgSRI--DGIGLYRTEipFM--------------------------- 468
Cdd:PRK06464 473 LEE----MPET-----PTKIMMNVG-NPERAFDF-AALpnDGVGLARLE--FIinnmigvhplallefdqqdadlkaeie 539
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 469 -LQSGFPSEEE----QVAQYQGML-QMFNDKPVTLRTLD---------VGADKqlpYMPIsEENPCLGWRGIRITLDQP- 532
Cdd:PRK06464 540 eLTAGYASPEEfyvdKLAEGIATVaAAFYPKPVIVRLSDfksneyanlIGGER---YEPE-EENPMLGFRGASRYLSESf 615
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 533 -EIFLIQVRAMLRANAATG--NLSILLPMVTSIDEVDEARRLIERAGREVEEmigyaiPKPRIGIMLEVPSMVFMLPHLA 609
Cdd:PRK06464 616 rEAFALECEAIKRVREEMGltNVEVMIPFVRTVEEAEKVIELLAENGLKRGE------NGLKVIMMCEIPSNALLAEEFL 689
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 610 NRIDFISVGTNDLTQYILAVDRNNTRVASIYDSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGD-PMCVAILIGLGYRH 688
Cdd:PRK06464 690 EYFDGFSIGSNDLTQLTLGLDRDSGLVAHLFDERNPAVKKLISMAIKAAKKAGKYVGICGQAPSDhPDFAEWLVEEGIDS 769
                        410       420       430
                 ....*....|....*....|....*....|...
gi 446880627 689 LSMNGRSVARVKYLLrhidfedAQTLARRSLEA 721
Cdd:PRK06464 770 ISLNPDAVVDTWLAV-------AEVEKKIILEA 795
PEP-utilizers_N pfam05524
PEP-utilizing enzyme, N-terminal;
172-294 7.20e-23

PEP-utilizing enzyme, N-terminal;


Pssm-ID: 461671 [Multi-domain]  Cd Length: 125  Bit Score: 94.60  E-value: 7.20e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  172 RALPAAPGVAIATGWQ-DATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLLS 250
Cdd:pfam05524   1 KGIGASPGIAIGKAVVlEEPELEVPDEREVPADDVEAEIARLEAALEAAREELEALAERAAGELGEEEAAIFEAHLMMLE 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446880627  251 DARLRRELFAEVDKGAV-AEWAVKKIIEKFAEQFAALTDNYLKER 294
Cdd:pfam05524  81 DPELLEEVEELIREGGLnAEAAVKEVVDEFAAMFEAMDDPYLRER 125
GAF smart00065
Domain present in phytochromes and cGMP-specific phosphodiesterases; Mutations within these ...
17-158 1.08e-21

Domain present in phytochromes and cGMP-specific phosphodiesterases; Mutations within these domains in PDE6B result in autosomal recessive inheritance of retinitis pigmentosa.


Pssm-ID: 214500 [Multi-domain]  Cd Length: 149  Bit Score: 92.06  E-value: 1.08e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627    17 RLNEALNILVTDICLAMDTEVCSVYLADHD-RRCYYLMATRGLKKPRGRtVALAFDEGIVGLVGRLAEPINLADAQKHPS 95
Cdd:smart00065   1 DLEELLQTILEELRQLLGADRVLIYLVDENdRGELVLVAADGLTLPTLG-IRFPLDEGLAGRVAETGRPLNIPDVEADPL 79
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446880627    96 FKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQREL-RQYDESEESFLVTLATQMAAILSQSQ 158
Cdd:smart00065  80 FAEDLLGRYQGVRSFLAVPLVADGELVGVLALHNKKSpRPFTEEDEELLQALANQLAIALANAQ 143
PRK11377 PRK11377
dihydroxyacetone kinase subunit M; Provisional
163-396 1.39e-21

dihydroxyacetone kinase subunit M; Provisional


Pssm-ID: 183108 [Multi-domain]  Cd Length: 473  Bit Score: 98.67  E-value: 1.39e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 163 FGQYRQTRIRALPAAPGVAIATGWQdaTMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAAIF 242
Cdd:PRK11377 239 FGETEEVAPPTLRPVPSPVSGKAFY--YQPVLCTVQAKSTLTVEEEQERLRQAIDFTLLDLMTLTAKAEASGLDDIAAIF 316
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 243 DLYSHLLSDArlrrELFAEVDK-----GAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLddsvQGPN 317
Cdd:PRK11377 317 SGHHTLLDDP----ELLAAASErlqheHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHL----TQTK 388
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 318 AWPERF----ILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGAD-----IQPSvlhrRTLVVDG 388
Cdd:PRK11377 389 EELPQFnsptILLAENIYPSTVLQLDPAVVKGICLSAGSPLSHSAIIARELGIGWICQQGeklyaIQPE----ETLTLDV 464

                 ....*...
gi 446880627 389 YRGELLVD 396
Cdd:PRK11377 465 KTQRLNRQ 472
PEP-utilizers pfam00391
PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/alpha domain ...
320-391 8.40e-16

PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it.


Pssm-ID: 459796 [Multi-domain]  Cd Length: 73  Bit Score: 72.44  E-value: 8.40e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446880627  320 PERFILVADELSATTLAELpqDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHR-RTLVVDGYRG 391
Cdd:pfam00391   3 PEGVILVAPDTTPSDTAGL--DKAAGIVTERGGMTSHAAIVARELGIPAVVGVGDATILLKEgDLVTVDGSTG 73
GAF pfam01590
GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl ...
18-154 1.26e-14

GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl cyclases, phytochromes, FhlA and NifA. Adenylyl and guanylyl cyclases catalyze ATP and GTP to the second messengers cAMP and cGMP, respectively, these products up-regulating catalytic activity by binding to the regulatory GAF domain(s). The opposite hydrolysis reaction is catalyzed by phosphodiesterase. cGMP-dependent 3',5'-cyclic phosphodiesterase catalyzes the conversion of guanosine 3',5'-cyclic phosphate to guanosine 5'-phosphate. Here too, cGMP regulates catalytic activity by GAF-domain binding. Phytochromes are regulatory photoreceptors in plants and bacteria which exist in two thermally-stable states that are reversibly inter-convertible by light: the Pr state absorbs maximally in the red region of the spectrum, while the Pfr state absorbs maximally in the far-red region. This domain is also found in FhlA (formate hydrogen lyase transcriptional activator) and NifA, a transcriptional activator which is required for activation of most Nif operons which are directly involved in nitrogen fixation. NifA interacts with sigma-54. This domain can bind biliverdine and phycocyanobilin (Matilla et al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).


Pssm-ID: 460259 [Multi-domain]  Cd Length: 133  Bit Score: 71.36  E-value: 1.26e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627   18 LNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTValafdEGIVGLVGRLAEPINLADAQKHPSF- 96
Cdd:pfam01590   2 LEEILQTILEELRELLGADRCALYLPDADGLEYLPPGARWLKAAGLEIP-----PGTGVTVLRTGRPLVVPDAAGDPRFl 76
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 446880627   97 KYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRElRQYDESEESFLVTLATQMAAIL 154
Cdd:pfam01590  77 DPLLLLRNFGIRSLLAVPIIDDGELLGVLVLHHPR-PPFTEEELELLEVLADQVAIAL 133
GAF COG2203
GAF domain [Signal transduction mechanisms];
2-467 7.42e-13

GAF domain [Signal transduction mechanisms];


Pssm-ID: 441805 [Multi-domain]  Cd Length: 712  Bit Score: 72.15  E-value: 7.42e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627   2 LTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLkkPRGRTVALAFDEGIVGLVGRL 81
Cdd:COG2203  192 LALLNEISQALRSALDLEELLQRILELAGELLGADRGAILLVDEDGGELELVAAPGL--PEEELGRLPLGEGLAGRALRT 269
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  82 AEPINLADAQKHPSFK--YIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQV 159
Cdd:COG2203  270 GEPVVVNDASTDPRFApsLRELLLALGIRSLLCVPLLVDGRLIGVLALYSKEPRAFTEEDLELLEALADQAAIAIERARL 349
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 160 TALFGQYRQTRIRALpaapgVAIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETA 239
Cdd:COG2203  350 YEALEAALAALLQEL-----ALLRLLLDLELTLLRLRQLLLELLLALLLLLSLLGAELLLLLLDAADLSGLLALEGLLLL 424
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 240 AIFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLDDSVQGPNAW 319
Cdd:COG2203  425 DLLLLLLLLRRILLLRVLRRLLLGDEEGLVLLLALAELELLEILELLVLLAVILLALALLAALLLLLLLLLALLALSALA 504
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 320 PERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEP 399
Cdd:COG2203  505 VLASLLLALLLLLLLLLLLLLLGLLAALAADLLLLAAALLEDLLILLLVLLLERELLTLVGVLLLLGLSVLLIELALALI 584
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446880627 400 VLIQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPF 467
Cdd:COG2203  585 LALALLELLLVAVGDLLLLERDLLLLLVLLVRLLLELLVVTLELTVLVVLAAVEDSALLLRLALALAS 652
GAF_2 pfam13185
GAF domain; The GAF domain is named after some of the proteins it is found in, including ...
18-154 6.79e-12

GAF domain; The GAF domain is named after some of the proteins it is found in, including cGMP-specific phosphodiesterases, adenylyl cyclases and FhlA. It is also found in guanylyl cyclases and phytochromes. The structure of a GAF domain shows that the domain shares a similar fold with the PAS domain. This domain can bind O2, CO and NO (Matilla et.al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).


Pssm-ID: 433019 [Multi-domain]  Cd Length: 137  Bit Score: 63.64  E-value: 6.79e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627   18 LNEALNIlVTDICLAMD-TEVCSVYLADHDRRcyyLMATRGLKKPRGRTVALAFDEGIVGLVGRLAEPINLADAQKHPSF 96
Cdd:pfam13185   4 LEELLDA-VLEAAVELGaSAVGFILLVDDDGR---LAAWGGAADELSAALDDPPGEGLVGEALRTGRPVIVNDLAADPAK 79
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 446880627   97 KYIPSVkEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAIL 154
Cdd:pfam13185  80 KGLPAG-HAGLRSFLSVPLVSGGRVVGVLALGSNRPGAFDEEDLELLELLAEQAAIAI 136
PykA2 COG3848
Phosphohistidine swiveling domain of PEP-utilizing enzymes [Signal transduction mechanisms];
324-391 1.25e-05

Phosphohistidine swiveling domain of PEP-utilizing enzymes [Signal transduction mechanisms];


Pssm-ID: 443058  Cd Length: 321  Bit Score: 47.97  E-value: 1.25e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446880627 324 ILVADELSATTLAELpqDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLV-VDGYRG 391
Cdd:COG3848  245 ILVVPSTDAEFVPAI--EKAAGIITEEGGLTSHAAIVGLELGIPVIVGAEGATEILKDGQVVtVDAERG 311
GAF_3 pfam13492
GAF domain;
22-151 6.71e-05

GAF domain;


Pssm-ID: 433253 [Multi-domain]  Cd Length: 129  Bit Score: 43.13  E-value: 6.71e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627   22 LNILVTDICLAMDTEVCSVYLADHDRRcyylmatrglkkprgRTVALAFDEGIVGLVGRLAEPINLAD-AQKHPSFKYIP 100
Cdd:pfam13492   6 LEALLKLLVRLLGAERAAVYLLDEDGN---------------KLQVAAGYDGEPDPSESLDADSPLARrALSSGEPISGL 70
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 446880627  101 SVKEE---RFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMA 151
Cdd:pfam13492  71 GSAGEdglPDGPALVVPLVAGRRVIGVLALASSKPRAFDAEDLRLLESLAAQIA 124
PpsA COG0574
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and ...
324-392 9.66e-05

Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism]; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase is part of the Pathway/BioSystem: Gluconeogenesis


Pssm-ID: 440339 [Multi-domain]  Cd Length: 455  Bit Score: 45.59  E-value: 9.66e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446880627 324 ILVADELSattlaelPQD-----RLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLV-VDGYRGE 392
Cdd:COG0574  386 ILVRDETD-------PDDvpgmkAAAGIVTERGGMTSHAAIVARELGIPAVVGCGDATRVLKDGDEItVDGTTGE 453
FhlA COG3604
FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis ...
104-154 1.59e-04

FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms];


Pssm-ID: 442823 [Multi-domain]  Cd Length: 338  Bit Score: 44.45  E-value: 1.59e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446880627 104 EERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAIL 154
Cdd:COG3604   70 ARERQLFLGVPLRVGGEVLGVLTLDSRRPGAFSEEDLRLLETLASLAAVAI 120
PRK05878 PRK05878
pyruvate phosphate dikinase; Provisional
344-392 1.53e-03

pyruvate phosphate dikinase; Provisional


Pssm-ID: 235635 [Multi-domain]  Cd Length: 530  Bit Score: 41.65  E-value: 1.53e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446880627 344 AGVVVRDGAANSHAAIMVRALGIPTVM--GADIQPSvLHRRTLVVDGYRGE 392
Cdd:PRK05878 401 QGIVTEVGGATSHAAVVSRELGRVAVVgcGAGVAAA-LAGKEITVDGYEGE 450
CitE COG2301
Citrate lyase beta subunit [Carbohydrate transport and metabolism];
523-664 4.12e-03

Citrate lyase beta subunit [Carbohydrate transport and metabolism];


Pssm-ID: 441876  Cd Length: 288  Bit Score: 39.75  E-value: 4.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627 523 RGIRI-TLDQPEiFLIQVRAMLRANAATgnlsILLPMVTSIDEVDEARRLIERAGREVEEMigyaipkpRIGIMLEVPSM 601
Cdd:COG2301   65 VFVRInALDTPW-GLDDLAALVGAGLDG----IVLPKVESAEDVRALAALLTELEAEGGSI--------PLMALIETARG 131
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446880627 602 VFMLPHLA---NRIDFISVGTNDLTqyilavdrNNTRVASIYDSlhPAMLRALSMIAQEAEKHGLD 664
Cdd:COG2301  132 LLNAAEIAaasPRVEALVFGAEDLA--------ADLGARRTRDG--DELLYARSRIVLAARAAGLA 187
MsrC COG1956
GAF domain-containing protein, putative methionine-R-sulfoxide reductase [Defense mechanisms, ...
69-155 5.63e-03

GAF domain-containing protein, putative methionine-R-sulfoxide reductase [Defense mechanisms, Signal transduction mechanisms];


Pssm-ID: 441559 [Multi-domain]  Cd Length: 156  Bit Score: 38.27  E-value: 5.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446880627  69 AFDEGIVGLVGRLAEPINLADAQKHPsfKYI---PSVKEErfrafLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVT 145
Cdd:COG1956   73 PFGKGVCGTAAAEGETQLVPDVHAFP--GHIacdSASRSE-----IVVPIFKDGEVIGVLDIDSPTPGRFDEEDQAGLEA 145
                         90
                 ....*....|
gi 446880627 146 LATQMAAILS 155
Cdd:COG1956  146 LAALLAEALD 155
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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