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Conserved domains on  [gi|446879047|ref|WP_000956303|]
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MFS transporter [Escherichia coli]

Protein Classification

MFS transporter( domain architecture ID 10150691)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085|GO:0016020
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
15-403 4.98e-34

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


:

Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 130.62  E-value: 4.98e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  15 LCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMP 94
Cdd:cd06174    3 LGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  95 GYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGsglLGFKAGIWFY 174
Cdd:cd06174   83 SFWLLLLGRFLLGLGSGLI-DPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLG---FGWRAVFLIA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 175 SLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVA 254
Cdd:cd06174  159 AALALLAAILLLLVVPDPPESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGLSV 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 255 LVGAYGIINQYCLKMIGGPIGGMISDKILKspskyLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAV 334
Cdd:cd06174  239 AVAGLLLSLFGLAGALGSLLLGLLSDRLIG-----RKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPL 313
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446879047 335 FFAPIGEAKIAENKtGAAMALGSFIGYAPAMFCFSLYGYILDlnpGIIGYKIVFGIMACFAFSGAVVSV 403
Cdd:cd06174  314 SFALIAELFPPEIR-GTAFGLLNTFGFLGGAIGPLLAGFLLA---ATFGLTGAFLVLAVLLLLAAILLL 378
 
Name Accession Description Interval E-value
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
15-403 4.98e-34

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 130.62  E-value: 4.98e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  15 LCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMP 94
Cdd:cd06174    3 LGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  95 GYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGsglLGFKAGIWFY 174
Cdd:cd06174   83 SFWLLLLGRFLLGLGSGLI-DPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLG---FGWRAVFLIA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 175 SLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVA 254
Cdd:cd06174  159 AALALLAAILLLLVVPDPPESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGLSV 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 255 LVGAYGIINQYCLKMIGGPIGGMISDKILKspskyLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAV 334
Cdd:cd06174  239 AVAGLLLSLFGLAGALGSLLLGLLSDRLIG-----RKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPL 313
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446879047 335 FFAPIGEAKIAENKtGAAMALGSFIGYAPAMFCFSLYGYILDlnpGIIGYKIVFGIMACFAFSGAVVSV 403
Cdd:cd06174  314 SFALIAELFPPEIR-GTAFGLLNTFGFLGGAIGPLLAGFLLA---ATFGLTGAFLVLAVLLLLAAILLL 378
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
3-411 1.28e-29

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 118.05  E-value: 1.28e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047   3 TKKKWALFSLLRLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIA 82
Cdd:COG2271    5 SRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  83 TGLLGVYLTTMPGYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGs 162
Cdd:COG2271   85 WGLATLLFGFATSFWQLLLLRFLLGLGEAGF-FPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFG- 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 163 gllgfkagiWFYSLIVIAVGIIIFFVLNdkeeapsvevkkedgaskntsmtsvlkdktIWLIAFNVFFVYAVYCGLTFFI 242
Cdd:COG2271  163 ---------WRAAFLILGLPGLLLALLR------------------------------FWLLALAYFLVYFALYGFLTWL 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 243 P-FLKNIYLLPVALVGAYGIINQYCLkMIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPhesmPVYLGMACT 321
Cdd:COG2271  204 PtYLVEVRGLSLAQAGLLLSLPFLAG-IVGSLLGGWLSDRLGRRRKLVLAIGLLLAALALLLLALLP----SPALAIALL 278
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 322 LGFGAIVFTQRAVFFAPIGEAkIAENKTGAAMALGSFIGYAPAMFCFSLYGYILDLnpgiIGYKIVFGIMACFAFSGAVV 401
Cdd:COG2271  279 FLAGFGLGGAFGLLWALAAEL-FPKKARGTASGLVNTFGFLGGALGPLLVGYLLDA----TGYQAAFLLLAALALLAALL 353
                        410
                 ....*....|
gi 446879047 402 SVMLVKRISQ 411
Cdd:COG2271  354 ALLLLRETRK 363
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
34-377 2.40e-15

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 77.03  E-value: 2.40e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047   34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDMM 113
Cdd:TIGR00881  21 LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF-QGM 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  114 NWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGllgfKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:TIGR00881 100 GWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW----HWVFIVPGIIAIIVSLICFLLLRDSP 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  194 EAPSV---------------EVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFlkniYLLPVALVGA 258
Cdd:TIGR00881 176 QSCGLppaeempneepdgdaEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPL----YLTQEKGFSK 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  259 YGIINQYCLKMIGGPIG----GMISDKILKSPSKYLCYTFI-ISTAALVLLIMLPHESMPVYLGMACTLGF----GAIVF 329
Cdd:TIGR00881 252 EKASWAFTLYELGGLVGtllaGWLSDKLFNGRRGPLAVFFMaLIIVSLLVYWLNPAANPLMDLICLFALGFlvygPQMLI 331
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 446879047  330 TQRAVFFAPigeakiaENKTGAAMALGSFIGYAPAMFCFSLYGYILDL 377
Cdd:TIGR00881 332 GVIASELAP-------KKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372
MFS_1 pfam07690
Major Facilitator Superfamily;
29-366 5.41e-14

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 72.84  E-value: 5.41e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047   29 AFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGV 108
Cdd:pfam07690  18 ALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  109 TCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFFV 188
Cdd:pfam07690  98 GAGAL-FPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF-----GWRAAFLILAILSLLAAVLLLLP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  189 LNDKEEAPSVEVKKEdGASKNTSMTSVLKDKTIWLIaFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQyCLK 268
Cdd:pfam07690 172 RPPPESKRPKPAEEA-RLSLIVAWKALLRDPVLWLL-LALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGG-LLG 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  269 MIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFApigeAKIAENK 348
Cdd:pfam07690 249 AIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVS----DLAPKEE 324
                         330
                  ....*....|....*...
gi 446879047  349 TGAAMALGSFIGYAPAMF 366
Cdd:pfam07690 325 RGTASGLYNTAGSLGGAL 342
uhpT PRK09556
hexose-6-phosphate:phosphate antiporter;
34-238 4.40e-05

hexose-6-phosphate:phosphate antiporter;


Pssm-ID: 236564 [Multi-domain]  Cd Length: 467  Bit Score: 45.42  E-value: 4.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLL----GVYLTTMPGYWGILFV-WALFGV 108
Cdd:PRK09556  55 MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICmlgfGASLGSGSVSLGLMIAlWALSGF 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 109 TcDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAfsALAVF---TWFGSGLLGFkagIWFYSLIVIAVGIII 185
Cdd:PRK09556 135 F-QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAG--GVALWganYFFDGHVIGM---FIFPSIIALIIGFIG 208
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446879047 186 FFV---------LNDKEEAPSVEVKKEDGASKNTSMTS-------VLKDKTIWLIAFNVFFVYAVYCGL 238
Cdd:PRK09556 209 LRYgsdspeelgWGKAEEIFGEPISEEDKETESTDMTKwqifveyVLKNPVIWLLCFANIFLYIVRIGI 277
 
Name Accession Description Interval E-value
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
15-403 4.98e-34

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 130.62  E-value: 4.98e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  15 LCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMP 94
Cdd:cd06174    3 LGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  95 GYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGsglLGFKAGIWFY 174
Cdd:cd06174   83 SFWLLLLGRFLLGLGSGLI-DPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLG---FGWRAVFLIA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 175 SLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVA 254
Cdd:cd06174  159 AALALLAAILLLLVVPDPPESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGLSV 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 255 LVGAYGIINQYCLKMIGGPIGGMISDKILKspskyLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAV 334
Cdd:cd06174  239 AVAGLLLSLFGLAGALGSLLLGLLSDRLIG-----RKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPL 313
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446879047 335 FFAPIGEAKIAENKtGAAMALGSFIGYAPAMFCFSLYGYILDlnpGIIGYKIVFGIMACFAFSGAVVSV 403
Cdd:cd06174  314 SFALIAELFPPEIR-GTAFGLLNTFGFLGGAIGPLLAGFLLA---ATFGLTGAFLVLAVLLLLAAILLL 378
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
3-411 1.28e-29

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 118.05  E-value: 1.28e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047   3 TKKKWALFSLLRLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIA 82
Cdd:COG2271    5 SRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  83 TGLLGVYLTTMPGYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGs 162
Cdd:COG2271   85 WGLATLLFGFATSFWQLLLLRFLLGLGEAGF-FPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFG- 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 163 gllgfkagiWFYSLIVIAVGIIIFFVLNdkeeapsvevkkedgaskntsmtsvlkdktIWLIAFNVFFVYAVYCGLTFFI 242
Cdd:COG2271  163 ---------WRAAFLILGLPGLLLALLR------------------------------FWLLALAYFLVYFALYGFLTWL 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 243 P-FLKNIYLLPVALVGAYGIINQYCLkMIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPhesmPVYLGMACT 321
Cdd:COG2271  204 PtYLVEVRGLSLAQAGLLLSLPFLAG-IVGSLLGGWLSDRLGRRRKLVLAIGLLLAALALLLLALLP----SPALAIALL 278
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 322 LGFGAIVFTQRAVFFAPIGEAkIAENKTGAAMALGSFIGYAPAMFCFSLYGYILDLnpgiIGYKIVFGIMACFAFSGAVV 401
Cdd:COG2271  279 FLAGFGLGGAFGLLWALAAEL-FPKKARGTASGLVNTFGFLGGALGPLLVGYLLDA----TGYQAAFLLLAALALLAALL 353
                        410
                 ....*....|
gi 446879047 402 SVMLVKRISQ 411
Cdd:COG2271  354 ALLLLRETRK 363
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
29-415 2.73e-24

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 103.42  E-value: 2.73e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  29 AFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGV 108
Cdd:COG2223   26 VLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGI 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 109 tCDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFFV 188
Cdd:COG2223  106 -GGGGSFAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAF-----GWRNAFLILGILLLVVAVLAWLF 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 189 LNDKEEAPSVEVKKEDGASKntsmtSVLKDKTIWLIAFNVFFVYAVYCGLT-FFIPFLKNIYLLPVALVGAYGIInQYCL 267
Cdd:COG2223  180 LRDPPAGAAAAAKASLRDQL-----EALRDPRFWLLSLLYFGTFGSFIGFSsWLPPYLVDQFGLSAATAGLLAAL-FALL 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 268 KMIGGPIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHeSMPVYLGMACTLGFGAIVFTqrAVFFAPIGEAkIAEN 347
Cdd:COG2223  254 GALGRPLGGWLSDRI--GGRRVLLIVFALMALGLLLLALALG-SLWLFLVLFLLLGLALGGGN--GAVFALVPDI-FPTK 327
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446879047 348 KTGAAMALGSFIGYAPAMFCFSLYGYILDLNPgiiGYKIVFGIMACFAFSGAVVSVMLVKRISQRKKE 415
Cdd:COG2223  328 NAGAVYGLVGAAGGLGGFLGPLLFGALLDATG---SYTAAFLVFAVLALVALVLTLLLYRRPRRAAAA 392
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
33-406 4.57e-17

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 81.94  E-value: 4.57e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDM 112
Cdd:cd17312   28 PIVEEIGLSKDDLGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWGLNGLF-QS 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 113 MNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLGFKAGIwfyslIVIAVGIIIFFVLNDk 192
Cdd:cd17312  107 MGWPPCVKLLGNWFSKKERGTVYGIWSTSHNFGGILAPILAASLASYYGWRAAFLVPGI-----VGLVVAIILFFFLRD- 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 193 eeapsvevkkedgaskntsmtsvlKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNiyLLPVALVGAYGIINQYCLKMIG 271
Cdd:cd17312  181 ------------------------SPPYVWVLSLAYAFVYIVRYACLDWGPlYLYE--VKGYSLIDAGWFSSLYEVGGIA 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 272 GPIG-GMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMpvYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTG 350
Cdd:cd17312  235 GTILaGLLSDKLFGGRRAPIAVIYMLLMTLSLALFWFFPHNK--LLSIVLLFLIGFFVGGPINLIGGAAAQDIGRKEAAG 312
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446879047 351 AAMALGSFIGYAPAMFCFSLYGYILDlnpgiigyKIVFGIMACFAFSGAVVSVMLV 406
Cdd:cd17312  313 TATGFVGLFGYLGASLAGLPLGYIID--------HYGWSTVFYFLISAALLSVLLL 360
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
34-377 2.40e-15

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 77.03  E-value: 2.40e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047   34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDMM 113
Cdd:TIGR00881  21 LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF-QGM 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  114 NWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGllgfKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:TIGR00881 100 GWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW----HWVFIVPGIIAIIVSLICFLLLRDSP 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  194 EAPSV---------------EVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFlkniYLLPVALVGA 258
Cdd:TIGR00881 176 QSCGLppaeempneepdgdaEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPL----YLTQEKGFSK 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  259 YGIINQYCLKMIGGPIG----GMISDKILKSPSKYLCYTFI-ISTAALVLLIMLPHESMPVYLGMACTLGF----GAIVF 329
Cdd:TIGR00881 252 EKASWAFTLYELGGLVGtllaGWLSDKLFNGRRGPLAVFFMaLIIVSLLVYWLNPAANPLMDLICLFALGFlvygPQMLI 331
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 446879047  330 TQRAVFFAPigeakiaENKTGAAMALGSFIGYAPAMFCFSLYGYILDL 377
Cdd:TIGR00881 332 GVIASELAP-------KKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
34-376 5.21e-14

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 73.04  E-value: 5.21e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17475   22 LQEDLHLSLAQVGLLLSALNLGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGAGYGSV 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 114 NwPVLLKSVSRLGNSEQQGRLFGFFETGRgivdTVVAFSALAVFTWFGSGlLGFKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:cd17475  102 Q-PGGGRAIMRWFPPRERGLAMGIRQTGV----PLGGALAAALLPPLALH-YGWRAAFVVAGLVSILAAVLFWLFYREPP 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 194 EAPSVevkKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAV-YCGLTFFIPFLKNIYLLPVALVGAYGIINQyCLKMIGG 272
Cdd:cd17475  176 AASAA---TESASTLLRSLKEVLRNRDVWLIAIAGALLVAPqFALLTFLLLFLHDHLGLSVVAAGALLAVAQ-LGGALGR 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 273 PIGGMISDKILKSPSK-YLCYTFIISTAALVLLIMLPHESMPVYLGMACTLgFGAIVFTQRAVFFAPIGEAKIAENkTGA 351
Cdd:cd17475  252 IGLGRVSDRVFGGRRRpVLVITAAIAAAALLVLSLLSPGTPLWLLVLLLIL-LGLFAIGWNGLYLTLVAESAGPEQ-AGT 329
                        330       340
                 ....*....|....*....|....*
gi 446879047 352 AMALGSFIGYAPAMFCFSLYGYILD 376
Cdd:cd17475  330 ALGLANTINFIGIAIGPPLFGLLVD 354
MFS_1 pfam07690
Major Facilitator Superfamily;
29-366 5.41e-14

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 72.84  E-value: 5.41e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047   29 AFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGV 108
Cdd:pfam07690  18 ALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  109 TCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFFV 188
Cdd:pfam07690  98 GAGAL-FPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF-----GWRAAFLILAILSLLAAVLLLLP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  189 LNDKEEAPSVEVKKEdGASKNTSMTSVLKDKTIWLIaFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQyCLK 268
Cdd:pfam07690 172 RPPPESKRPKPAEEA-RLSLIVAWKALLRDPVLWLL-LALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGG-LLG 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  269 MIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFApigeAKIAENK 348
Cdd:pfam07690 249 AIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVS----DLAPKEE 324
                         330
                  ....*....|....*...
gi 446879047  349 TGAAMALGSFIGYAPAMF 366
Cdd:pfam07690 325 RGTASGLYNTAGSLGGAL 342
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
33-328 1.77e-13

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 71.16  E-value: 1.77e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDM 112
Cdd:COG2814   35 LIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGA 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 113 MnWPVLLKSVSRLGNSEQQGRLFGFFETGrgivdTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNdk 192
Cdd:COG2814  115 L-FPAALALIADLVPPERRGRALGLLGAG-----LGLGPALGPLLGGLLADLFGWRWVFLVNAVLALLALLLLLRLLP-- 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 193 eeapsvEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIINQYCLkMIG 271
Cdd:COG2814  187 ------ESRPAARARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPlYLQEVLGLSASAAGLLLALFGLGG-VLG 259
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446879047 272 GPIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIV 328
Cdd:COG2814  260 ALLAGRLADRF--GRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLF 314
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
34-412 1.97e-13

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 71.42  E-value: 1.97e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:COG0738   34 LKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLLGLGLGLL 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 114 NwpVLLKSVSRLGNSEQQGRLFGFFEtgrgivdtvvAFSALAVFT--WFGSGLLGFKAGI-WFYSLIVIAVGIIIFFVLN 190
Cdd:COG0738  114 D--VAANPYVAALGPETAASRLNLLH----------AFFSLGALLgpLLGGLLILLGLSLsWHLPYLILAVLLLLLALLF 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 191 DKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAV-YCGLTFFIPFLKNIYLLPVAlVGAYGIINQYCLKM 269
Cdd:COG0738  182 LRSKLPEIEEEEEEAAGSAASLKSLLKNPRLLLGGLAIFLYVGAeGAIGDWLPLYLKDVLGLSEA-TAALGLSLFWGGMT 260
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 270 IGGPIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVftqrAVFFAPIGEAKiaENKT 349
Cdd:COG0738  261 IGRFLGGFLLKRF--GPVRLLRLSALLAAVGLLLALLAPGPWLALIGLALVGLGLSLMF----PTIFSLALDGL--GKRT 332
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446879047 350 GAAMALGSFIGYAPAMFCFSLYGYILDlnpgIIGYKIVFGIMACFAFSGAVVSVMLVKRISQR 412
Cdd:COG0738  333 AAAVSAVLIMGIVGGAIGPPLIGFLAD----AFGLRAAFLVPLVCYLLILLLALALKRKRRKK 391
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
38-406 2.30e-12

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 67.99  E-value: 2.30e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVtCDMMNWPV 117
Cdd:cd17325   26 LGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGL-ASAAVWPA 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 118 LLKSVSRLGNSEQQGRLFGFFETGRGIvdtvvAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLndKEEAPS 197
Cdd:cd17325  105 AMALIADIAPPEERGRAMGIFSSAIGL-----GFLIGPLLGGLLADALGYRAPFLVCAALALLALVLALLLL--PEPRPP 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 198 VEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVG----AYGIINqyclkMIGG 272
Cdd:cd17325  178 PNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPlYAAELGGLSPAQIGllfgAQGLAS-----ALSQ 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 273 PIGGMISDKILKSPskYLCYTFIISTAALVLLIMLPheSMPVYLGMACTLGFG-AIVFTQRAVFFAPIgeakIAENKTGA 351
Cdd:cd17325  253 PPAGKLSDRIGRKP--LILIGLLLSAVALLLLPLAT--SFWLLLLLLALLGLGlGLVFPATLALLADI----VPPEGRGT 324
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446879047 352 AMALGSFIGYAPAMFCFSLYGYILDLnpgiIGYKIVFGIMACFAFSGAVVSVMLV 406
Cdd:cd17325  325 AMGLFNTAFSLGMVLGPLLGGFLYDA----FGFATPFLAAAALLLLAAVLFLLLR 375
MFS_GlpT cd17345
Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; ...
34-285 1.16e-11

Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; Glycerol-3-Phosphate Transporter (also called GlpT or G-3-P permease) is responsible for glycerol-3-phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The GlpT group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340903 [Multi-domain]  Cd Length: 411  Bit Score: 66.11  E-value: 1.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDM- 112
Cdd:cd17345   29 LIEQYGLSKTEIGLIGSALSIAYGLSKFVMGNLSDRSNPKRFLAIGLILSAIINILIGFVPSATSSVGLMFILLFLNGWf 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 113 --MNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGllGFKAGIWFYSLIVIAVGIIIFFVLN 190
Cdd:cd17345  109 qgMGWPPSGRTMVHWFSKKERGTWTSIWNISHNVGGGLVGPLAGLGLAIFGDG--WWRGAFIFPAIIAIIVAVIVLFLGK 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 191 DKEEA---PSVEVKKED--------GASKNTS-----MTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPflknIYLLPVA 254
Cdd:cd17345  187 DTPESeglPPIEEYKGDypeeadgeEEEQELSaweifVKYVLKNKLLWYIAIANVFVYLVRYGILDWAP----TYLSEVK 262
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 446879047 255 LVGAYGIINQYCLKMIGGPIG----GMISDKILKS 285
Cdd:cd17345  263 GFSKAQAMWAFSLFEWAAIPGtllaGWLSDKLFKG 297
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
33-362 6.99e-11

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 63.34  E-value: 6.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDM 112
Cdd:cd17324   24 DIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGG 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 113 MnWPVLLKSVSRLGNSEQQGRLFGFFETGrgivdTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLndk 192
Cdd:cd17324  104 F-WAIAAAYAADLVPPEKRGRAIGLVFSG-----LTLGLVLGRPLGGLLGQLLGWRAAFLAIAVLALLAALLLWRLL--- 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 193 eeaPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVY-AVYCGLTFFIPFLKNI-YLLPVALVGAYGIInqYCLKMI 270
Cdd:cd17324  175 ---PSLPPKKPGSLGLLSSLLLLLRNPRLRLAYLITFLLFgGFFALYTYLAPFLTDVpGFSSSAIIGLLLLF--GVAGVV 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 271 GGPIGGMISDKIlksPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMA-CTLGFGAIVFTQRAVFFapigeaKIAENKT 349
Cdd:cd17324  250 GSPLAGRLADRG---GRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVlWGLGFFAAHSALQTRVL------RLAPEAR 320
                        330
                 ....*....|...
gi 446879047 350 GAAMALGSFIGYA 362
Cdd:cd17324  321 GLASSLYLAAYNL 333
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
127-419 1.71e-10

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 62.61  E-value: 1.71e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 127 NSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFG-SGLLGFKAGIWFYSLIVIAVGIIIFFVLndkEEAPSVEVKKEDG 205
Cdd:COG2211  141 DYEERTRLSSWRFAFAGLGGLLASVLPPPLVAAFGgDAALGYRLTALIFAVLGLLAFLLTFFGT---KERPVPEEEKVSL 217
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 206 ASkntSMTSVLKDKT-IWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQYCLkMIGGPIGGMISDKIlk 284
Cdd:COG2211  218 KE---SLKALLKNRPfLLLLLAYLLFFLALALVAALLLYYFKYVLGLSAALVGLLLALYFLAA-LLGAPLWPRLAKRF-- 291
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 285 SPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTqrAVFFA------PIGEAKIAENKTGAAMALGSF 358
Cdd:COG2211  292 GKKKAFIIGLLLAALGLLLLFFLGPGNLWLLLVLAALAGIGLGAIL--VLPWAmladvvDYDEWKTGRRREGLYFGIFTF 369
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446879047 359 IGYAPAMFCFSLYGYILDL---NPG-------IIGYKIVFGIMACFAFSGAVVSVMLVKRISQRKKEMLAA 419
Cdd:COG2211  370 AIKLGQALAGALAGLLLALfgyVAGaaqspsaLTGIRLLFFLLPAVLLLLAALLLLFYPLTRERHAEIRAE 440
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
34-187 6.21e-10

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 60.28  E-value: 6.21e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17325  226 AAELGGLSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLV 305
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446879047 114 nWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFF 187
Cdd:cd17325  306 -FPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAF-----GFATPFLAAAALLLLAAVLFLL 373
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
34-308 1.46e-08

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 56.03  E-value: 1.46e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVtCDMM 113
Cdd:cd17478   22 LIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLLLVALAGI-GSAA 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 114 NWPVLLKSVSRLGnSEQQGRLFGFFETGRGIvdtvvAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:cd17478  101 FHPEGARLASQAA-GGRRGLAMSIFSVGGNL-----GFALGPLIAAALVALFGGLGLLILLIIPGLAVALLLLRLRPLKK 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 194 EAPSVEVKKEDGASKNTSMTSVLkdktIWLIAFnVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAY-GIINQYClkMIGG 272
Cdd:cd17478  175 PEAKKAAAKSSARSTLKGVWRAL----LLLLII-VFLRSWVLSSLTTFLPFYLVQRGYSLVFAGLLlSLFLFAG--AIGT 247
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 446879047 273 PIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLP 308
Cdd:cd17478  248 LIGGPLSDRF--GRRRVIIASLLLAAPFLLLFLLTP 281
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
33-405 1.68e-08

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 56.04  E-value: 1.68e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDM 112
Cdd:cd17319   28 TIMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVA-EA 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 113 MNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIvDTVVAFSALAVFTwfgsGLLGFKAGIWFYSLIVIAVGIIIFFVLndk 192
Cdd:cd17319  107 GFFPGAIKALAEWFPARERGRATGLFNSGAPL-GAAIGPPLSGWLL----LLFGWRWAFIIEGLLGLLLAVLWWFYL--- 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 193 eeapsvevkkedgaskntsmtsvlkdKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIINQYCLkMIG 271
Cdd:cd17319  179 --------------------------RQVWGLALGYFGINYALYGLLTWLPtYLKQARGFSLKQVGLLAAIPFLAG-AIG 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 272 GPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMActLGFGAIVFTQrAVFFAPIGEAkIAENKTGA 351
Cdd:cd17319  232 MILGGRLSDRLLRGARRLVIIIGLLLAAVGLLLAYLTTSPVVAVILLS--LAGFGIGAAS-PVFWSLPADL-LPGEAAAT 307
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446879047 352 AMALGSFIGYAPAMFCFSLYGYILDLNpgiIGYKIVFGIMACFAFSGAVVSVML 405
Cdd:cd17319  308 AGGLINSGGNLGGFVAPLLIGYLVDAT---GSYTAAFLFLAAVALLAALLVLLL 358
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
33-408 8.59e-08

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 53.72  E-value: 8.59e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDM 112
Cdd:COG2807   43 EIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGAGIAV 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 113 MN--WPVLLKSVSrlgnSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFFVLN 190
Cdd:COG2807  123 GNvlLPGLIKRWF----PDRVGLMTGLYTAAMGLGAALAAGLTVPLAAAL-----GWRGALAVWALLALLALLLWLPLLR 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 191 DKEEAPSvevkkedGASKNTSMTSVLKDKTIWLIAFnVFFVYAV--YCGLTFFIPFLKNIYLLPVA---LVGAYGIINqy 265
Cdd:COG2807  194 RRPAAAA-------AAPAAASLRSLWRSPLAWLLTL-FFGLQSLlyYAVVAWLPPILRDAGLSAATaglLLSLFQLAG-- 263
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 266 clkMIGGPIGGMISDKiLKSPSKYLCYTFIISTAALVLLIMLPHESMPVY-----LGMACTLGFGAIVFTQRAvffapiG 340
Cdd:COG2807  264 ---IPGSLLVPLLADR-LGDRRPLLLLLGLLGLAGLLGLLLAPGSLPWLWavllgLGQGGLFPLALTLIGLRA------R 333
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446879047 341 EAKIAenktGAAMALGSFIGYAPAMFCFSLYGYILDLNPgiiGYKIVFGIMACFAFSGAVVSVMLVKR 408
Cdd:COG2807  334 TPAEA----AALSGMAQSVGYLLAALGPLLVGALHDATG---SWTAALLLLAALAVLMLVAGLLAGRP 394
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
30-327 8.91e-08

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 53.81  E-value: 8.91e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  30 FYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVT 109
Cdd:cd17355   25 FIIPIIAEFGWSRAVISLAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLWQLYLLWGLLGGG 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 110 CDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFG--SGLLGFKAgiwfysLIVIAVGIIIFF 187
Cdd:cd17355  105 GAGTLAAVAFATVAAWWFERRRGLALGILTAGGGLGSLVFLPLGAALIEAFGwrTALLVLAL------LALLVLVPVLLL 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 188 VLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFV-YAVYCGLTFFIPFLKNIYLLPVALVGAYGIINqyC 266
Cdd:cd17355  179 LRRRPADLALRAYDDASPASPGSTLKEALRSASFWLLALAFFLCgFAVVGLIVHLVPYLADRGISPAAAAVALALIG--L 256
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446879047 267 LKMIGGPIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHeSMPVYLGMACTLGFGAI 327
Cdd:cd17355  257 FNIVGRLLSGWLGDRY--SPRRLLAASYALRALGLALLLLLPF-PPLALLLFAALFGLGWG 314
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
34-263 5.47e-07

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 51.46  E-value: 5.47e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17329   26 LHQQLGLSASIVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFGGGLF 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 114 nWPVLLKSVSRLGNSEQQGRLFGFFETGRGIvdtVVAFSALAvftwfGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:cd17329  106 -EPASEAMIADVTTPENRTRAFSLLYWAINL---GVAIGPLL-----GGLLLLYSFRLLFLAAAVLFLLAALVLLFLLPE 176
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446879047 194 EAPSVEVKKEDGASKntSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIIN 263
Cdd:cd17329  177 TRPKRRAAEKTEILR--GYKIVLRDRAFLLFLLASFLISLIYFQLESTLPvYVVEILGLGESLLGLLLALN 245
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
38-359 8.04e-07

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 50.71  E-value: 8.04e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLT-TMPGYWGILFVWALFGVTcdMMNWP 116
Cdd:cd17341   29 LGLSTSQIGLLVAIPVLAGALLRLPYGFLCDRFGGRRVFIASLLLLLIPLLALAlAVSSYWGLLVLGFLLGFA--GANFA 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 117 VLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTW--FGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDkee 194
Cdd:cd17341  107 SGQPWASFWFPKEKIGGAAGGIAGAGNMGVAVSQLLAPLIAGAivFDGGFVGWRNAFFVPGILLAIAAVLVLLFGDD--- 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 195 apsVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGiinqYCLKMIGG- 272
Cdd:cd17341  184 ---LPTGKASALEFLKVQLAVLKNYRTWILSLLYGVTFGSFVGFSNVLPtYFKTRFGLPLVTAGILA----ALFPLAGAl 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 273 --PIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHES---------MPVYLGMACTLGFGAIVFTQRAVFFAPIGe 341
Cdd:cd17341  257 arPAGGWLSDRF--GGRRRLWWLFIVMTIGAALLSLSLPTSgtnlvlflaLFVALGLGAGAGNGSVFRMVPFIFRRELG- 333
                        330
                 ....*....|....*...
gi 446879047 342 akIAENKTGAAMALGSFI 359
Cdd:cd17341  334 --AVTGLVGAIGGLGGFF 349
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
34-401 3.05e-06

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 49.11  E-value: 3.05e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17474   25 IAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIGAAGL 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 114 NwPVLLKSVSRLGNSEQQGRLFGFFETGRGIvdTVVAFSALAvftwfgsGLLGfkAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:cd17474  105 G-PLALTLIGDLFEGGERAKAMGLYEAALGL--GIAVGPLLG-------GLLA--AISWRYPFFLLAALIPVAFLAILFL 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 194 EAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPF-LKNIYLLPVALVGAYgiinqYCLKMIGG 272
Cdd:cd17474  173 LPEPKEKAKSSSATKLRDLKKALRGRGLLTFLVSAFLYFFLYFAFLTYLPFlLELLYGISPIIIGLL-----FAGWSVLL 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 273 PIGGMISDKILK---SPSKYLCYTFIISTAALVLLIMLPHesmpVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKt 349
Cdd:cd17474  248 ALGSLFVGRLLKkrfGARRILVIGLLLYALSLLLLGFVPS----LALLLIAIVLFGLGLGLNLPLLTTLVTELAPEEER- 322
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446879047 350 GAAMALGSFIGYAPAMFCFSLYGYILdlnpGIIGYKIVFGIMACFAFSGAVV 401
Cdd:cd17474  323 GTASSLYNFVRFLGQAVGPLLFGLLL----EIFGLSAPFLVGAAIALAAAVL 370
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
38-406 3.77e-06

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 48.74  E-value: 3.77e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNwPV 117
Cdd:cd17489   26 LGGSEAVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFT-TA 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 118 LLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLGfkagiwFYSLIVIAVGIIIFFVLNDKEEAPS 197
Cdd:cd17489  105 AATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLF------IVAAVLALLALLLVFLVKDPPPVAA 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 198 VEVKKEDGASKNtsmtsvLKDKTIWLIAFNVFFVYAVYCGLTFFIPflknIYL--LPVALVGAYGIINQYCLkMIGGPIG 275
Cdd:cd17489  179 EEAEAGTRAFRR------LVEKKVLPPALILFLASIAYGAISTFLP----LYAaeRGISNAGLFFTVYAIAL-LLSRPFS 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 276 GMISDKILKSPSKYLCYTFIIstAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFapigeAKIAENKTGAAMAL 355
Cdd:cd17489  248 GKLSDRKGPKTVIIPGLLLLA--LGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAV-----DLVPPHRRGAANGT 320
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446879047 356 gSFIGYAPAMfcfSLYGYILDLNPGIIGYKIVFGIMACFAFSGAVVSVMLV 406
Cdd:cd17489  321 -FFIFFDLGI---GLGGLLLGLVAELFGYRAMFLLAAVVVLLALVLYIFLL 367
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
34-144 2.22e-05

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 46.12  E-value: 2.22e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVtCDMM 113
Cdd:COG2814  234 LQEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGF-GFGL 312
                         90       100       110
                 ....*....|....*....|....*....|.
gi 446879047 114 NWPVLLKSVSRLGNSEQQGRLFGFFETGRGI 144
Cdd:COG2814  313 LFPLLQALVAELAPPEARGRASGLYNSAFFL 343
uhpT PRK09556
hexose-6-phosphate:phosphate antiporter;
34-238 4.40e-05

hexose-6-phosphate:phosphate antiporter;


Pssm-ID: 236564 [Multi-domain]  Cd Length: 467  Bit Score: 45.42  E-value: 4.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLL----GVYLTTMPGYWGILFV-WALFGV 108
Cdd:PRK09556  55 MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICmlgfGASLGSGSVSLGLMIAlWALSGF 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 109 TcDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAfsALAVF---TWFGSGLLGFkagIWFYSLIVIAVGIII 185
Cdd:PRK09556 135 F-QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAG--GVALWganYFFDGHVIGM---FIFPSIIALIIGFIG 208
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446879047 186 FFV---------LNDKEEAPSVEVKKEDGASKNTSMTS-------VLKDKTIWLIAFNVFFVYAVYCGL 238
Cdd:PRK09556 209 LRYgsdspeelgWGKAEEIFGEPISEEDKETESTDMTKwqifveyVLKNPVIWLLCFANIFLYIVRIGI 277
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
34-403 5.38e-05

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 45.00  E-value: 5.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATgLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17333   22 LEEAFNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLI-SLALALIFATPSIYLFVVLMFLAGLGAGI 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 114 NWPVLLKSVSRLGNSEQQGRLF---GFFETGrgivdtvvAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLn 190
Cdd:cd17333  101 LDTGANTFVGALFEESSATRLNvlhGFFGLG--------ALIGPLIATSLLTSELSWSWAYLIIGLIYLLLAILILLTL- 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 191 dKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFF-VYAVYCGLTFFIPFLKNIYLLPVALVGaYGIINQYCLKM 269
Cdd:cd17333  172 -FPELPSARNPQQSVGAFSASASRLLRNPSIILGALALFLyVGAETAFSSWVPSYLVEKKHVSDGLAG-YLLSGFWVGIT 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 270 IGGPIGGMISDKILksPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFfapigeAKIAENKT 349
Cdd:cd17333  250 IGRLLGGPISRRIK--PHTLLVLSGSGALLGLLILLLAPTLVVGLVATALLGLFMAALFPTILSLG------ISNLPYAK 321
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446879047 350 GAAMALGSFIGYAPAMFCFSLYGYILDlnpgIIGYKIVFGIMACFAFSGAVVSV 403
Cdd:cd17333  322 GKGTSVLLAAGSIGGAIIPFIMGFIAE----AVGIQTAMLLITILYAIIFVLAL 371
2A0108 TIGR00886
nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]
38-326 7.14e-05

nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]


Pssm-ID: 273322 [Multi-domain]  Cd Length: 354  Bit Score: 44.60  E-value: 7.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047   38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATG--LLGVYLTTMPgYWGILFVWALFGVTcdMMNW 115
Cdd:TIGR00886  32 LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDIFGPRYTTALSLLLLAipCLWAGLAVQS-YSVLLLIRLFIGIA--GGSF 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  116 PVLLKSVSRLGNSEQQGRLFGfFETGRGIVDTVVAF---SALAVFTWFGSGLLGFKAGIWFYSL----IVIAVGIIIFFV 188
Cdd:TIGR00886 109 ASCMPWISFFFPKKIQGTALG-LAAGWGNMGGGVAQfvmPPIIGSLIFGGGQPAHLAWGWAFVIvpagILLLPALLIFFV 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  189 LNDKEEApsvevKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIINQYcL 267
Cdd:TIGR00886 188 GADTPPG-----KPATGKLSFKEALKVFGNRHTWILALLYSVTFGSFLGVSSIFAmLFKDQFGLSKVQAGAYASLGGF-L 261
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446879047  268 KMIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLG--MACTLGFGA 326
Cdd:TIGR00886 262 GSLARPAGGAISDRLGGARKLLMNFLGVAMGAFLVVLGLVSDGSLAAFIVlfVALFFFAGA 322
PRK11663 PRK11663
glucose-6-phosphate receptor/MFS transporter UhpC;
61-324 1.07e-04

glucose-6-phosphate receptor/MFS transporter UhpC;


Pssm-ID: 183266 [Multi-domain]  Cd Length: 434  Bit Score: 44.32  E-value: 1.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  61 FLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWAL------FGvtcdmmnWPVLLKSVSRLGNSEQQGRL 134
Cdd:PRK11663  76 FVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLnaffqgWG-------WPVCAKLLTAWYSRTERGGW 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 135 FGFFET----GRGIVDTVVAFSALAvftwfgsglLGFKAGIWFYSLIVIAVGIIIFFVLNDKEEA---PSV--------E 199
Cdd:PRK11663 149 WAIWNTahnvGGALIPLVVGAIALH---------YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAmglPSVgewrhdalE 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 200 VKKE-DGAS---KNTSMTSVLKDKTIWLIAFNVFFVYAVYCGltffIPFLKNIYL---LPVALVGAYGIINQYclkMIGG 272
Cdd:PRK11663 220 LAQQqEGAGlsrKEILTKYVLLNPYIWLLSFSYVLVYVVRAA----INDWGNLYMsetLGVDLVTANSAVSMF---ELGG 292
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 273 PIGGMI----SDKILKSPSKYLCYTFII----STAALVLlimLPHESMPVYLGMACTLGF 324
Cdd:PRK11663 293 FIGALVagwgSDKLFNGNRGPMNLIFAAgillSVGSLWL---MPFASYVMQAACFFTIGF 349
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
38-393 5.47e-04

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 41.82  E-value: 5.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVtCDMMNWPV 117
Cdd:cd17316   31 LGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGI-GIGGEYPG 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 118 LLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLgfkagiWFYSLIVIAVGIIIFFVLNdkeeaps 197
Cdd:cd17316  110 ASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGDWG------WRILFLIGALPALLALLLR------- 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 198 vevkkedgaskntsmtsvlkdKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIINqYCLKMIGGPIGG 276
Cdd:cd17316  177 ---------------------RRTLLLILLWFFISFGYYGLTTFLPtYLQTVLGLSPATSSLYLLLI-SLGALVGALIAG 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 277 MISDKILKSPSkYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTGAAMALG 356
Cdd:cd17316  235 LLSDRIGRKKT-LVIGLILSGILALPLFYLLSGSPTLLLLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLG 313
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 446879047 357 SFI-GYAPAMFCFSLYGYILDLNPGIIGYKIVFGIMAC 393
Cdd:cd17316  314 RLGgGGAPPLIALLLASTGGTGVPALILALLAIVALIV 351
MFS_FEN2_like cd17327
Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; ...
34-328 1.32e-03

Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; This family is composed of Saccharomyces cerevisiae pantothenate transporter FEN2 (or fenpropimorph resistance protein 2) and similar proteins from fungi and bacteria including fungal vitamin H transporter, allantoate permease, and high-affinity nicotinic acid transporter, as well as Pseudomonas putida phthalate transporter and nicotinate degradation protein T (nicT). These proteins are involved in the uptake into the cell of specific substrates such as pathothenate, biotin, allantoate, and nicotinic acid, among others. The FEN2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340885 [Multi-domain]  Cd Length: 406  Bit Score: 40.70  E-value: 1.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTngqiGNAMSVNSFVTTVGFFL----SIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVt 109
Cdd:cd17327   32 MKEDLKLV----GNQYNWGNTVFYVGYIIfelpGNLLLQRFPPSKWLSVFIVLWGLLTLLTAAVKNFGGLIALRFFLGL- 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 110 CDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGllGFKAGIWFY---SLIVIAVGIIIF 186
Cdd:cd17327  107 FESGVFPGFILYLGMWYKREEQAKRIAFFYAAAGLGSIFGGLLAYGVFKILGVG--GLAGWRWLFiieGLITIIIGLVIF 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 187 FV----------LNDKEEAPSVEVKKEDGASKNTSMTS------VLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNI- 248
Cdd:cd17327  185 FWlpdnpskawfLTEEEKELAVERLRANQTGKGDQKFKwkqikeAFKDPRTWLLFLFFFCSQITNNGISNFLPlILKSLg 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 249 -YLLPVALVGAYGiinqYCLKMIGGPIGGMISDKIlksPSKYLCYTF--IISTAALVLLIMLPHESMPVYLGMACTLGFG 325
Cdd:cd17327  265 fYSLQTNLLSVPI----GALGAVSLLIAALLSDRF---KKRGLFAIFacVLALVGSIILLAAPNPPGAYFAAYILGGGSY 337

                 ...
gi 446879047 326 AIV 328
Cdd:cd17327  338 AGF 340
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
122-401 1.80e-03

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 40.22  E-value: 1.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 122 VSRLGNSEQQGRLFGFFETGrgivDTVVAF-SALAVFTWFGSGLLGFKAGIWFYSLI-VIAVGIIIFFVLNDKeeapsve 199
Cdd:cd17370  113 LADATPPSGRGKAFGLHRAL----DTLGAVlGPLLAALLLYLLGGNYRTIFLLAAIPaLLALLILLFVVKEYP------- 181
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 200 vKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINqyCLKMIGGPIGGMIS 279
Cdd:cd17370  182 -RPPKLRKKSKKTSLKKLPKAFWLYLLAVALFALGNFSFAFLILRAQELGLSAALIPLLYALFN--LVYALAAYPAGRLS 258
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 280 DKILKspsKYLCYTFIISTAALVLLIMLPHESMPVYLGMACtlgFGAIVFTQRAVFFAPIGEAKIAENKtgaAMALGSF- 358
Cdd:cd17370  259 DRIGR---KKLLILGYLSLALAYLGFALGSSLWLLLLGFIL---WGLYMGAQESIERAAVADLVPAELR---GTAYGLFn 329
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 446879047 359 IGYAPAMFCFSL-YGYILDLnpgiIGYKIVFGIMACFAFSGAVV 401
Cdd:cd17370  330 TVVGIGWLLASLiAGYLWDL----ISPSAAFLFSAVLALIALLL 369
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
31-318 2.44e-03

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 39.91  E-value: 2.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  31 YIPMQEYFHLTNGQIGNAMSVNSFVTTVgffLSI---YFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFG 107
Cdd:cd17328   22 LPDIQSDFLIDDSLAGLLQTVFIISYMV---LSPifgYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVG 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 108 V---TCDmmnwPVLLKSVSRLGNSEQQGRLFGFFetgrGIVDTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGII 184
Cdd:cd17328   99 IgeaSYS----PIAPTIIADLFPKEKRTRALGVF----YFAIPLGSGLGYVVGGLVAQATGGWRWAFRVTGVLGVLLAIL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 185 IFFVLNDKEEAPSVEVKKEDGASKN--TSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVA-----LVG 257
Cdd:cd17328  171 LLLFVREPPRGAAEGGVMAKSTATSflADLKALAKNPSFILSTLGFTAVSFVTGALAFWAPTFFLRAFGVGDlssadVGL 250
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446879047 258 AYGIINQYClKMIGGPIGGMISDKILKSPSK---YLC-YTFIISTAALVLLIMLPHESMPVYLGM 318
Cdd:cd17328  251 IFGAITCIA-GVLGVLLGGILADRLRRKTPRadpLVCaVGLLAAAPFLFLALVLALSNLLLAWVL 314
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
34-138 3.43e-03

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 39.48  E-value: 3.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTM--SFSLIATGLLGvyLTTMPGYWGILFVWALFGVTCD 111
Cdd:cd17473  224 LQERGGGSAALIGLALAIASLAGAIGALLFGRLKRRLGKRRLLaiGFALMALGFLL--LALASGLWVVLLGAILAGLGFG 301
                         90       100
                 ....*....|....*....|....*..
gi 446879047 112 MMNwPVLLKSVSRLGNSEQQGRLFGFF 138
Cdd:cd17473  302 LLL-PTLNSWAMSLVPPELRGRAMGIV 327
MFS_UhpC cd17488
Membrane sensor protein UhpC of the Major Facilitator Superfamily of transporters; Membrane ...
40-285 3.58e-03

Membrane sensor protein UhpC of the Major Facilitator Superfamily of transporters; Membrane sensor protein UhpC acts as both a sensor and a transport protein. It is part of the UhpABC signaling cascade that controls the expression of the hexose phosphate transporter UhpT. UhpC recognizes external glucose-6-phosphate (Glc6P) and induces transport by UhpT. It can also transport and sense Glc6P, and interacts with the histidine kinase UhpB, leading to the stimulation of the autokinase activity of UhpB. This group also includes the hexose phosphate transport protein UhpT from Chlamydia pneumoniae; it is a transport protein for sugar phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The UhpC group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341041 [Multi-domain]  Cd Length: 364  Bit Score: 39.31  E-value: 3.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047  40 LTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDMMNWPVLL 119
Cdd:cd17488   35 LDKSDIGILGSLFYITYGVSKFVSGLMSDRSNPRYFMGIGLIATGIINILFGFSSSLWAFAVLWTLNAFF-QGWGWPPCA 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 120 KSVSRLGNSEQQGRLFGFFETGRGIvdtvvAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKEeapsve 199
Cdd:cd17488  114 RLLTHWYSRNERGFWWSIWNTSHNI-----GGALIPILTGFAALTYGWRAGMYVPGIIAILMGIVLCWRLRDRP------ 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446879047 200 vkkedgaskntsmtsvlkdKTIWLIAFNVFFVYAVYCGLTFFipflKNIYL---LPVALVGAYGIINQYCL-KMIGGPIG 275
Cdd:cd17488  183 -------------------PYIWLLAFCYVLVYVVRTAINDW----GNLYLsetHGYSLVKANSAVSLFEVgGLIGALVA 239
                        250
                 ....*....|
gi 446879047 276 GMISDKILKS 285
Cdd:cd17488  240 GWGSDKLFKG 249
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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