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Conserved domains on  [gi|446786128|ref|WP_000863384|]
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MULTISPECIES: TIGR01741 family protein [Staphylococcus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF600 super family cl04640
Protein of unknown function, DUF600; This conserved region is found in several uncharacterized ...
1-157 2.25e-68

Protein of unknown function, DUF600; This conserved region is found in several uncharacterized proteins from Gram positive bacteria.


The actual alignment was detected with superfamily member TIGR01741:

Pssm-ID: 414121  Cd Length: 157  Bit Score: 204.36  E-value: 2.25e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446786128    1 MAFEEKLNEMYNEIANKISSMIPVEWETVYAMAYVNERSGEVFYNYTEPSSDELFYYTSVLNKYNIPRSEFMDSVYELYK 80
Cdd:TIGR01741   1 MTFEEKLSDMYQEIANKINDMIPVEWEKVYLYAYVDDESGEVLFNYTTPESNQLIYYQDIPKHYNVSKDIFKTSLRELRE 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446786128   81 QFDNLRELFIEEGLEPWTSCEFDFTRDGKLNVSFDYIDWVNSEFGPMGREHYYMYKKFGIWPEKEYAINWVKKIKDY 157
Cdd:TIGR01741  81 LFEELREEFRNENLEPWTSCEFDFTRSGELKVSFDYIDWIASEFDGYGRENYYMYKKFGILPEDEYEKEFVISYEGY 157
 
Name Accession Description Interval E-value
staph_tand_hypo TIGR01741
conserved hypothetical protein; This model represents a tandem array of 10 proteins in ...
1-157 2.25e-68

conserved hypothetical protein; This model represents a tandem array of 10 proteins in Staphylococcus aureus and the C-terminal region of one protein each in Bacillus subtilis and Bacillus halodurans.


Pssm-ID: 130802  Cd Length: 157  Bit Score: 204.36  E-value: 2.25e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446786128    1 MAFEEKLNEMYNEIANKISSMIPVEWETVYAMAYVNERSGEVFYNYTEPSSDELFYYTSVLNKYNIPRSEFMDSVYELYK 80
Cdd:TIGR01741   1 MTFEEKLSDMYQEIANKINDMIPVEWEKVYLYAYVDDESGEVLFNYTTPESNQLIYYQDIPKHYNVSKDIFKTSLRELRE 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446786128   81 QFDNLRELFIEEGLEPWTSCEFDFTRDGKLNVSFDYIDWVNSEFGPMGREHYYMYKKFGIWPEKEYAINWVKKIKDY 157
Cdd:TIGR01741  81 LFEELREEFRNENLEPWTSCEFDFTRSGELKVSFDYIDWIASEFDGYGRENYYMYKKFGILPEDEYEKEFVISYEGY 157
DUF600 pfam04634
Protein of unknown function, DUF600; This conserved region is found in several uncharacterized ...
7-146 2.15e-47

Protein of unknown function, DUF600; This conserved region is found in several uncharacterized proteins from Gram positive bacteria.


Pssm-ID: 398357  Cd Length: 144  Bit Score: 150.89  E-value: 2.15e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446786128    7 LNEMYNEIANKISSMIPVEWETVYAMAYVNERSGEVFYNYTEPSSDELFYYTSVLNKYNIPRSEFMDSVYELYKQFDNLR 86
Cdd:pfam04634   1 LSELYEEIAEKIFDMIPEEWEKVYLYAEVLDGSGEVYFYYYPKGSEKPIYSHDIPEKYNVSEEEYKKLWDELYDLIKELR 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446786128   87 ELFIEEGLEPWTSCEFDFTRDGKLNVSFDYIDWVNSEFGPMGREHYYMYKKFGIWPEKEY 146
Cdd:pfam04634  81 EEFKKNNQEPWTNFTLTLDNTGKFKIDFNYDDLLNSEFDSYDRHIIWKYKYLGILPEDKS 140
 
Name Accession Description Interval E-value
staph_tand_hypo TIGR01741
conserved hypothetical protein; This model represents a tandem array of 10 proteins in ...
1-157 2.25e-68

conserved hypothetical protein; This model represents a tandem array of 10 proteins in Staphylococcus aureus and the C-terminal region of one protein each in Bacillus subtilis and Bacillus halodurans.


Pssm-ID: 130802  Cd Length: 157  Bit Score: 204.36  E-value: 2.25e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446786128    1 MAFEEKLNEMYNEIANKISSMIPVEWETVYAMAYVNERSGEVFYNYTEPSSDELFYYTSVLNKYNIPRSEFMDSVYELYK 80
Cdd:TIGR01741   1 MTFEEKLSDMYQEIANKINDMIPVEWEKVYLYAYVDDESGEVLFNYTTPESNQLIYYQDIPKHYNVSKDIFKTSLRELRE 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446786128   81 QFDNLRELFIEEGLEPWTSCEFDFTRDGKLNVSFDYIDWVNSEFGPMGREHYYMYKKFGIWPEKEYAINWVKKIKDY 157
Cdd:TIGR01741  81 LFEELREEFRNENLEPWTSCEFDFTRSGELKVSFDYIDWIASEFDGYGRENYYMYKKFGILPEDEYEKEFVISYEGY 157
DUF600 pfam04634
Protein of unknown function, DUF600; This conserved region is found in several uncharacterized ...
7-146 2.15e-47

Protein of unknown function, DUF600; This conserved region is found in several uncharacterized proteins from Gram positive bacteria.


Pssm-ID: 398357  Cd Length: 144  Bit Score: 150.89  E-value: 2.15e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446786128    7 LNEMYNEIANKISSMIPVEWETVYAMAYVNERSGEVFYNYTEPSSDELFYYTSVLNKYNIPRSEFMDSVYELYKQFDNLR 86
Cdd:pfam04634   1 LSELYEEIAEKIFDMIPEEWEKVYLYAEVLDGSGEVYFYYYPKGSEKPIYSHDIPEKYNVSEEEYKKLWDELYDLIKELR 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446786128   87 ELFIEEGLEPWTSCEFDFTRDGKLNVSFDYIDWVNSEFGPMGREHYYMYKKFGIWPEKEY 146
Cdd:pfam04634  81 EEFKKNNQEPWTNFTLTLDNTGKFKIDFNYDDLLNSEFDSYDRHIIWKYKYLGILPEDKS 140
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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