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Conserved domains on  [gi|446779845|ref|WP_000857101|]
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MULTISPECIES: L-asparagine permease [Salmonella]

Protein Classification

L-asparagine permease( domain architecture ID 11487584)

L-asparagine permease

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK15049 PRK15049
L-asparagine permease;
1-497 0e+00

L-asparagine permease;


:

Pssm-ID: 185009  Cd Length: 499  Bit Score: 847.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   1 MKTQTTHAAEQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRA 80
Cdd:PRK15049   1 MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  81 LGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGDVPQWVFALGALTIVGTMNM 160
Cdd:PRK15049  81 LGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 161 IGVKWFAEMEFWFALIKVLAIVIFLVVGTIFLGTGQPLEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVG 240
Cdd:PRK15049 161 IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 241 TAAGECKDPQKMVPKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLN 320
Cdd:PRK15049 241 TAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 321 SGLYCTGRILRSMSMGGSAPKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQ 400
Cdd:PRK15049 321 SGLYCTGRILRSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQ 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 401 MRLRQAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIASLPLIAILLVAGWFGVRRRVAEIHRTAP 480
Cdd:PRK15049 401 MRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLVIGWFGVRKRVAEIHSTAP 480
                        490
                 ....*....|....*....
gi 446779845 481 VTADSTE--SVVLKEEAAT 497
Cdd:PRK15049 481 VVEEDEEkqEIVFKPETAS 499
 
Name Accession Description Interval E-value
PRK15049 PRK15049
L-asparagine permease;
1-497 0e+00

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 847.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   1 MKTQTTHAAEQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRA 80
Cdd:PRK15049   1 MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  81 LGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGDVPQWVFALGALTIVGTMNM 160
Cdd:PRK15049  81 LGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 161 IGVKWFAEMEFWFALIKVLAIVIFLVVGTIFLGTGQPLEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVG 240
Cdd:PRK15049 161 IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 241 TAAGECKDPQKMVPKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLN 320
Cdd:PRK15049 241 TAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 321 SGLYCTGRILRSMSMGGSAPKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQ 400
Cdd:PRK15049 321 SGLYCTGRILRSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQ 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 401 MRLRQAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIASLPLIAILLVAGWFGVRRRVAEIHRTAP 480
Cdd:PRK15049 401 MRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLVIGWFGVRKRVAEIHSTAP 480
                        490
                 ....*....|....*....
gi 446779845 481 VTADSTE--SVVLKEEAAT 497
Cdd:PRK15049 481 VVEEDEEkqEIVFKPETAS 499
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
15-473 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 594.02  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  15 KRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSF 94
Cdd:COG1113    2 STSAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  95 VSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFA 174
Cdd:COG1113   82 SDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFW--FPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 175 LIKVLAIVIFLVVGTIFLGTGQPLE-GNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMV 253
Cdd:COG1113  160 LIKVVAIVAFIVVGLLLIFFGFGLPgGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTI 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 254 PKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSM 333
Cdd:COG1113  240 PKAINSVIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSL 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 334 SMGGSAPKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKEGKAA 413
Cdd:COG1113  320 AERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAA 399
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 414 DVSFKLPGAPFTSWLTLLFLLSVLVLMAFDyPNGTYTIASLPLIAILLVAGWFGVRRRVA 473
Cdd:COG1113  400 ALKFKMPGFPYTSYLTLAFLAAVLVLMAFD-PDTRIALIVGPVWLALLVVGYFLVRRRRA 458
AA_permease pfam00324
Amino acid permease;
35-476 1.75e-119

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 358.56  E-value: 1.75e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   35 VQMIAIGGAIGTGLFLGAGARLQMAGPALA-LVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWM 113
Cdd:pfam00324   2 VQMIALGGVIGTGLFVGSGSVLGQAGPAGAlLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWN 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  114 YFINWAMTGIVDITAVALYMHYWGAFGDVPQ-WVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVIFLVVGTIFL 192
Cdd:pfam00324  82 YWLSWITVLALELTAASILIQFWELVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIILL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  193 GTGQPleGNATGFHLITDNGG--FFPHGLL-PALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVIWRIGLFYV 269
Cdd:pfam00324 162 SGGNP--NDGAIFRYLGDNGGknNFPPGFGkGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  270 GSVVLLVLLLPWNAYQA------GQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFM 343
Cdd:pfam00324 240 LSLLAIGLLVPWNDPGLlndsasAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  344 AKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKE--GKAADVSFKLPG 421
Cdd:pfam00324 320 KKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYqgRSIDELPFKAPL 399
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446779845  422 APFTSWLTLLFLLSVLVLMAFDYP-------------NGTYTIASLPLIAILLVAGWFGVRRRVAEIH 476
Cdd:pfam00324 400 GPLGVILGLAAIIIILIIQFLYAFlpvpggpknwgagSFAAAYLIVLLFLIILIGVKLHVKNWKPQLL 467
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
33-471 3.08e-86

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 272.51  E-value: 3.08e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   33 RQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGW 112
Cdd:TIGR01773  17 RHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGRWAGFTIGW 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  113 MYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALgALTIVGTM-NMIGVKWFAEMEFWFALIKVLAIVIFLVVGTIF 191
Cdd:TIGR01773  97 LYWWFWVLVIPLEAIAAAGILQYW--FPDIPLWLFSL-ILTIVLTLtNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVA 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  192 LGTGQPlEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVIWRIGLFYVGS 271
Cdd:TIGR01773 174 IFGFAP-GSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRIIVFYLGS 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  272 VVLLVLLLPWNAYQAGQS-PFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFMAKMSRQH 350
Cdd:TIGR01773 253 IFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFMKLNKKG 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  351 VPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKEGKAAdVSFKLPGAPFTSWLTL 430
Cdd:TIGR01773 333 VPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEA-IKIRMWLYPWLTWLVI 411
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|.
gi 446779845  431 LFLLSVLVLMAFdYPNGTYTIASLPLIAILLVAGWFGVRRR 471
Cdd:TIGR01773 412 IFICGILVSMLF-IPSMRDEVLLTGLLTIIVLCSYLVFARR 451
 
Name Accession Description Interval E-value
PRK15049 PRK15049
L-asparagine permease;
1-497 0e+00

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 847.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   1 MKTQTTHAAEQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRA 80
Cdd:PRK15049   1 MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  81 LGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGDVPQWVFALGALTIVGTMNM 160
Cdd:PRK15049  81 LGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 161 IGVKWFAEMEFWFALIKVLAIVIFLVVGTIFLGTGQPLEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVG 240
Cdd:PRK15049 161 IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVG 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 241 TAAGECKDPQKMVPKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLN 320
Cdd:PRK15049 241 TAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 321 SGLYCTGRILRSMSMGGSAPKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQ 400
Cdd:PRK15049 321 SGLYCTGRILRSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQ 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 401 MRLRQAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIASLPLIAILLVAGWFGVRRRVAEIHRTAP 480
Cdd:PRK15049 401 MRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLVIGWFGVRKRVAEIHSTAP 480
                        490
                 ....*....|....*....
gi 446779845 481 VTADSTE--SVVLKEEAAT 497
Cdd:PRK15049 481 VVEEDEEkqEIVFKPETAS 499
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
15-473 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 594.02  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  15 KRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSF 94
Cdd:COG1113    2 STSAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  95 VSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFA 174
Cdd:COG1113   82 SDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFW--FPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 175 LIKVLAIVIFLVVGTIFLGTGQPLE-GNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMV 253
Cdd:COG1113  160 LIKVVAIVAFIVVGLLLIFFGFGLPgGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTI 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 254 PKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSM 333
Cdd:COG1113  240 PKAINSVIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSL 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 334 SMGGSAPKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKEGKAA 413
Cdd:COG1113  320 AERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAA 399
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 414 DVSFKLPGAPFTSWLTLLFLLSVLVLMAFDyPNGTYTIASLPLIAILLVAGWFGVRRRVA 473
Cdd:COG1113  400 ALKFKMPGFPYTSYLTLAFLAAVLVLMAFD-PDTRIALIVGPVWLALLVVGYFLVRRRRA 458
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
20-473 1.16e-128

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 382.21  E-value: 1.16e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  20 NAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGIFSFFILRALGELVLHRPSSGSFVSYA 98
Cdd:COG0833    4 SEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLaYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  99 REFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKV 178
Cdd:COG0833   84 TRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYW--FPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 179 LAIVIFLVVGT-IFLGTgqpLEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAI 257
Cdd:COG0833  162 ITVIAFIIVGLlMIFGI---IGGHAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAI 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 258 NSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGG 337
Cdd:COG0833  239 RQVFWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEG 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 338 SAPKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQA-IKEGK-AADV 415
Cdd:COG0833  319 MAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAyVAQGGdLEDL 398
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446779845 416 SFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIASLPLIAILLVAGWFGVRRRVA 473
Cdd:COG0833  399 KYKAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKKTKLV 456
AA_permease pfam00324
Amino acid permease;
35-476 1.75e-119

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 358.56  E-value: 1.75e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   35 VQMIAIGGAIGTGLFLGAGARLQMAGPALA-LVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWM 113
Cdd:pfam00324   2 VQMIALGGVIGTGLFVGSGSVLGQAGPAGAlLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWN 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  114 YFINWAMTGIVDITAVALYMHYWGAFGDVPQ-WVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVIFLVVGTIFL 192
Cdd:pfam00324  82 YWLSWITVLALELTAASILIQFWELVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIILL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  193 GTGQPleGNATGFHLITDNGG--FFPHGLL-PALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVIWRIGLFYV 269
Cdd:pfam00324 162 SGGNP--NDGAIFRYLGDNGGknNFPPGFGkGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  270 GSVVLLVLLLPWNAYQA------GQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFM 343
Cdd:pfam00324 240 LSLLAIGLLVPWNDPGLlndsasAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  344 AKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKE--GKAADVSFKLPG 421
Cdd:pfam00324 320 KKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYqgRSIDELPFKAPL 399
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446779845  422 APFTSWLTLLFLLSVLVLMAFDYP-------------NGTYTIASLPLIAILLVAGWFGVRRRVAEIH 476
Cdd:pfam00324 400 GPLGVILGLAAIIIILIIQFLYAFlpvpggpknwgagSFAAAYLIVLLFLIILIGVKLHVKNWKPQLL 467
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
23-471 8.12e-104

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 318.60  E-value: 8.12e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  23 EEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFL 102
Cdd:PRK11049  15 EQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLL 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 103 GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIV 182
Cdd:PRK11049  95 GPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFW--FPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIV 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 183 IFLVVGTIFLGTG-QPLEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVI 261
Cdd:PRK11049 173 ALIVVGLVMVAMHfQSPTGVEASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIP 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 262 WRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPK 341
Cdd:PRK11049 253 IRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 342 FMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPS--RVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKEGKAADVsFKL 419
Cdd:PRK11049 333 AFAKLSKRAVPAKGLTFSCICLLGGVVLLYVNPSviGAFTLVTTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSI-YKM 411
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446779845 420 PGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIASlPLIAILLVAGWFGVRRR 471
Cdd:PRK11049 412 PLGKLMCWVCMAFFAFVLVLLTLEDDTRQALIVT-PLWFIALGLGYLFIGKK 462
proY PRK10580
putative proline-specific permease; Provisional
28-475 5.20e-100

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 308.29  E-value: 5.20e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAA 107
Cdd:PRK10580   9 RGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAG 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 108 YVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVIFLV- 186
Cdd:PRK10580  89 YITGWTYCFEILIVAIADVTAFGIYMGVW--FPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVa 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 187 -VGTIFLGTGQPleGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVIWRIG 265
Cdd:PRK10580 167 gIGIIIWGIGNG--GQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRIL 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 266 LFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFMAK 345
Cdd:PRK10580 245 VFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSK 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 346 MSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKEGKAADVSFKLPGAPFT 425
Cdd:PRK10580 325 TSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVAT 404
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 446779845 426 SWLTLLFLLSVLVLMAFdYPNGTYTIASLPLIAILLVAGWFGVRRRVAEI 475
Cdd:PRK10580 405 TIGGLIFLVFIIGLIGY-HPDTRISLYVGFAWIVLLLIGWMFKRRHDRQL 453
PRK10238 PRK10238
aromatic amino acid transporter AroP;
22-476 3.38e-96

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 298.41  E-value: 3.38e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  22 HEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREF 101
Cdd:PRK10238   6 HGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKY 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 102 LGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAI 181
Cdd:PRK10238  86 WGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFW--YPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAV 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 182 VIFLVVGT--IFLGTGQPlegNATGFHLiTDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINS 259
Cdd:PRK10238 164 VAMIIFGGwlLFSGNGGP---QATVSNL-WDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 260 VIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSA 339
Cdd:PRK10238 240 VIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNA 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 340 PKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAiKEGKAADVSFKL 419
Cdd:PRK10238 320 PKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRA-KQEQGVVTRFPA 398
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446779845 420 PGAPFTSWLTLLFLLSVLVLMAFDyPNGTYTIASLPLIAILLVAGWFGVRRRVAEIH 476
Cdd:PRK10238 399 LLYPLGNWICLLFMAAVLVIMLMT-PGMAISVYLIPVWLIVLGIGYLFKEKTAKAVK 454
PRK10249 PRK10249
phenylalanine transporter; Provisional
27-427 1.05e-95

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 297.28  E-value: 1.05e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  27 HKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKA 106
Cdd:PRK10249  20 HRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFA 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 107 AYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVIFLV 186
Cdd:PRK10249 100 GFLSGWNYWVMFVLVGMAELTAAGIYMQYW--FPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIG 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 187 VGTIFLGTGQplEGNATGFHLITDNGGFFP---HGLLPALVLIqgvVFAFASIELVGTAAGECKDPQKMVPKAINSVIWR 263
Cdd:PRK10249 178 FGLWLLFSGH--GGEKASIDNLWRYGGFFAtgwNGLILSLAVI---MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYR 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 264 IGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFM 343
Cdd:PRK10249 253 ILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFL 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 344 AKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKEgKAADVSFKLPGAP 423
Cdd:PRK10249 333 TRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRR-QGRETQFKALLYP 411

                 ....
gi 446779845 424 FTSW 427
Cdd:PRK10249 412 FGNY 415
PRK10746 PRK10746
putative transport protein YifK; Provisional
23-409 6.48e-90

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 282.48  E-value: 6.48e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  23 EEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFL 102
Cdd:PRK10746   5 KPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYM 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 103 GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIV 182
Cdd:PRK10746  85 SPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFW--FPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTII 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 183 IFLVVG--TIFLGTGQplEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSV 260
Cdd:PRK10746 163 VMIVIGlgVIFFGFGN--GGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 261 IWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAP 340
Cdd:PRK10746 241 LWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLP 320
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446779845 341 KFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPS--RVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKE 409
Cdd:PRK10746 321 AAMAKVSRHGVPVAGVAVSILILLVGSCLNYIIPNpqRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKA 391
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
33-471 3.08e-86

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 272.51  E-value: 3.08e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   33 RQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGW 112
Cdd:TIGR01773  17 RHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGRWAGFTIGW 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  113 MYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALgALTIVGTM-NMIGVKWFAEMEFWFALIKVLAIVIFLVVGTIF 191
Cdd:TIGR01773  97 LYWWFWVLVIPLEAIAAAGILQYW--FPDIPLWLFSL-ILTIVLTLtNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVA 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  192 LGTGQPlEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVIWRIGLFYVGS 271
Cdd:TIGR01773 174 IFGFAP-GSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRIIVFYLGS 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  272 VVLLVLLLPWNAYQAGQS-PFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFMAKMSRQH 350
Cdd:TIGR01773 253 IFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFMKLNKKG 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  351 VPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKEGKAAdVSFKLPGAPFTSWLTL 430
Cdd:TIGR01773 333 VPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEA-IKIRMWLYPWLTWLVI 411
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|.
gi 446779845  431 LFLLSVLVLMAFdYPNGTYTIASLPLIAILLVAGWFGVRRR 471
Cdd:TIGR01773 412 IFICGILVSMLF-IPSMRDEVLLTGLLTIIVLCSYLVFARR 451
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
28-427 7.35e-75

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 243.73  E-value: 7.35e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGIFSFFILRALGELVLHRP-SSGSFVSYAREFLGEK 105
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIgYAIMGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVDPA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  106 AAYVAGWMYFINWAMTGIVDITAVALYMHYWGAfgDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVIFL 185
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTD--KVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  186 VVGTIFLGTGQPLEGnATGFHLITDNGGFFPHGLLP-----ALVLIQGVvFAFASIELVGTAAGECKDPQKMVPKAINSV 260
Cdd:TIGR00913 160 ILSIILNCGGGPNHG-YIGFRYWHDPGAFAGGTIGGrfkgvCSVFVTAA-FSFGGTELVALTAGEAANPRKSIPRAAKRT 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  261 IWRIGLFYVGSVVLLVLLLPWNAYQ---------AGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILR 331
Cdd:TIGR00913 238 FWRILVFYILTLFLIGFLVPYNDPRllssssssdSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLY 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  332 SMSMGGSAPKFMAKMSRQHVPYAGILATLVVYVVGvflnYLVPS----RVFEIVLNFASLGIIASWAFIMVCQMRLRQAI 407
Cdd:TIGR00913 318 ALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLA----FLAVSkkeaEVFTWLLNISGLSGFFTWMCICLSHIRFRKAM 393
                         410       420
                  ....*....|....*....|..
gi 446779845  408 K-EGKAAD-VSFKLPGAPFTSW 427
Cdd:TIGR00913 394 KaQGRSLDeLPYKSQTGPYGSY 415
PRK10836 PRK10836
lysine transporter; Provisional
23-405 2.35e-71

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 234.71  E-value: 2.35e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  23 EEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGIFSFFILRALGELVLHRPSSGSFVSYAREF 101
Cdd:PRK10836  10 APGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLsYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNY 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 102 LGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAI 181
Cdd:PRK10836  90 VEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWW--FPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTV 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 182 VIFLVVGTIFLgTGQPLEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVI 261
Cdd:PRK10836 168 IVFIIVGVLMI-IGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVF 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 262 WRIGLFYVGSVVLLVLLLPW--------NAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSM 333
Cdd:PRK10836 247 WRILLFYVFAILIISLIIPYtdpsllrnDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTL 326
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446779845 334 SMGGSAPKFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQ 405
Cdd:PRK10836 327 ACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRR 398
PRK11387 PRK11387
S-methylmethionine permease;
26-471 5.31e-71

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 233.59  E-value: 5.31e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  26 YHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPA-LALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGE 104
Cdd:PRK11387  12 FKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYLGP 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 105 KAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVIF 184
Cdd:PRK11387  92 ATGYTVAWLYWLTWTVALGSSLTAAGFCMQYW--FPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVTILAF 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 185 LVVGTIFLGTGQPLEGN--ATGFHLITDNGgFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVIW 262
Cdd:PRK11387 170 IVLGGAAIFGFIPMQDGspAPGLRNLTAEG-WFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTTIA 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 263 RIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKF 342
Cdd:PRK11387 249 RLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTLPAC 328
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 343 MAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQ-MRLRQAIKEGKA-ADVSFKLP 420
Cdd:PRK11387 329 FARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHfMFRRRHLRDGKAlSELAYRAP 408
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446779845 421 GAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIASLPLIAILLVAGWFGVRRR 471
Cdd:PRK11387 409 WYPLTPILGFVLCLLACVGLAFDPSQRIALWCGIPFVALCYGAYYLTQRLK 459
PRK10197 PRK10197
GABA permease;
37-442 3.69e-60

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 204.09  E-value: 3.69e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  37 MIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFI 116
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 117 NWAMTGIVDITAVALYMHYWgaFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVIFLVVGTIFLGTGQ 196
Cdd:PRK10197  81 FWVLVIPLEANIAAMILHSW--VPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFY 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 197 PLeGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAINSVIWRIGLFYVGSVVLLV 276
Cdd:PRK10197 159 PY-AEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVV 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 277 LLLPWNAYQAGQ-SPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFMAKMSRQHVPYAG 355
Cdd:PRK10197 238 ALIPWNMPGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVA 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 356 ILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQaIKEGKAADVSFKLPGAPFTSWLTLLFLLS 435
Cdd:PRK10197 318 VLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRK-ILRAEGSEIRLRMWLYPWLTWLVIGFITF 396

                 ....*..
gi 446779845 436 VLVLMAF 442
Cdd:PRK10197 397 VLVVMLF 403
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
20-404 1.28e-46

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 167.77  E-value: 1.28e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  20 NAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAR 99
Cdd:COG0531    3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYAR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 100 EFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYwgAFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVL 179
Cdd:COG0531   83 RALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSS--LFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 180 AIVIFLVVGTIFLGTgqpleGNATGFhlITDNGGFFphGLLPALVLIqgvVFAFASIELVGTAAGECKDPQKMVPKAINS 259
Cdd:COG0531  161 VLLLFIVVGLFAFDP-----ANFTPF--LPAGGGLS--GVLAALALA---FFAFTGFEAIANLAEEAKNPKRNIPRAIIL 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 260 VIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSA 339
Cdd:COG0531  229 SLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLL 308
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446779845 340 PKFMAKMS-RQHVPYAGILATLVVYVVGVflnyLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLR 404
Cdd:COG0531  309 PKVFAKVHpRFGTPVNAILLTGVIALLLL----LLGAASFTALASLASVGVLLAYLLVALAVIVLR 370
AA_permease_2 pfam13520
Amino acid permease;
38-404 1.55e-22

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 99.69  E-value: 1.55e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   38 IAIGGAIGTGLFLGAGARLqmAGPALAL-VYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFI 116
Cdd:pfam13520   9 LVIGSVIGSGIFVAPLVAS--GGPALIVwGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWF 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  117 NWAMTGIVDITAVALYMHYWGAFG----DVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVIFLVVGTIFL 192
Cdd:pfam13520  87 AYVLGLASSASVAASYLLSALGPDlvptTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIIILGLVT 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  193 GtgqpLEGNATGFHLITDNggFFPHGLLPALVLIQGVVFAFASIELVGTAAGEckDPQKMVPKAINSVIWRIGLFYVGSV 272
Cdd:pfam13520 167 A----DGGGFNLLSGEWHT--FFPDGWPGVFAGFLGVLWSFTGFESAANVSEE--VKKRNVPKAIFIGVIIVGVLYILVN 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  273 VLLVLLLPWNAYQAGQ---SPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAP--KFMAKMS 347
Cdd:pfam13520 239 IAFFGVVPDDEIALSSglgQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKVN 318
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 446779845  348 RQHVPYAGILATLVVYVVGVFLNYLVPSrVFEIVLNFASLGIIASWAFIMVCQMRLR 404
Cdd:pfam13520 319 KFGSPIRAIILTAILSLILLLLFLLSPA-AYNALLSLSAYGYLLSYLLPIIGLLILR 374
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
38-404 2.72e-17

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 84.48  E-value: 2.72e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   38 IAIGGAIGTGLFLGAG--ARLQmAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWmyf 115
Cdd:TIGR00906  38 LGIGSTIGAGIYVLTGevARND-SGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELWAFITGW--- 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  116 iNWAMTGIVDITAVAlymHYWGAFGD------VPQW-----------------VFALGALTIVGTMNMIGVKWFAEMEFW 172
Cdd:TIGR00906 114 -NLILEYVIGTAAVA---RSWSAYFDellnkqIGQFrrtyfklnydglaeypdFFAVCLILLLAVLLSFGVKESAWVNKI 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  173 FALIKVLAIVIFLVVGTIflgtgqplEGNATGFHLITDNG--GFFPHGLLPALVLIQGVVFAFASIELVGTAAGECKDPQ 250
Cdd:TIGR00906 190 FTAINILVLLFVIIAGFT--------KADVANWSITEEKGagGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVKNPQ 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  251 KMVPKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAgQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRIL 330
Cdd:TIGR00906 262 RAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDP-DAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVI 340
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446779845  331 RSMSMGGSAPKFMAKM-SRQHVPyagILATLVVYVVGVFLNYLVPsrvFEIVLNFASLGIIASWAFIMVCQMRLR 404
Cdd:TIGR00906 341 YAMARDGLLFKWLAQInSKTKTP---INATVVSGAIAALMAFLFD---LKALVDLLSIGTLLAYSLVAACVLILR 409
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
5-386 4.39e-15

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 77.48  E-value: 4.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845    5 TTHAAEQHAAKRRWLNAHEEGYHKAMGNRQVQM-----IAIGGAIGTGLFLGAGARLQMAG-PALAL-VYLICGIFSFFI 77
Cdd:TIGR00911  14 TNYQFSSSGRKKSVSASTVDGGEAVALKKEITLlsgvgIIVGTIIGSGIFVSPKGVLKNAGsVGLALiMWAVCGIFSIVG 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   78 LRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGW--MYFINWAMTGIVDITAVALYMHYWGAFGDVPQWVFALGA---L 152
Cdd:TIGR00911  94 ALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWieLLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAvlcV 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  153 TIVGTMNMIGVKWFAEMEFWFALIKVLAIVIFLVVGTIFLGTGQPlegnatgFHLITDNG--GFFPHGLLPALVLIQGvV 230
Cdd:TIGR00911 174 LLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGV-------ESLNPKNAfeGTETSAGGIVLAFYSG-I 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  231 FAFASIELVGTAAGECKDPQKMVPKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSK-LGVpyIGSIMNI 309
Cdd:TIGR00911 246 WAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERlLGV--MSWAMPA 323
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446779845  310 VVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFMAKMS-RQHVPYAGILATLVVYVVgvflnYLVPSRVFeIVLNFAS 386
Cdd:TIGR00911 324 LVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHvKRLTPLPSLLIVCTLTLL-----MLFSGDIY-SLINLIS 395
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
28-403 3.27e-08

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 55.83  E-value: 3.27e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845   28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGIFSFFILRALGELVLHRPS-SGSFVSYAREFLGEK 105
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIgWIITGVGMLALAFVFAILATKKPElDGGIYAYAREGFGPY 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  106 AAYVAGWMYFI-NWAMTGIVDITAVALYMHYWGAFGDVPQWVFALGA---LTIVGTMNMIGVKWFAEMEFWFALIKVLAI 181
Cdd:TIGR00905  87 IGFMSGWGYWLsAWIGNVAYAVLLFSALGYFFPLFGSGNPVPSILGAsvlLWVFTFLVLRGVRQAAFINTITTIAKLIPL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  182 VIFLVVGtIFLGTGQPLEGNATGfHLITDNGGFFPHGLLPALVliqgVVFAFASIELVGTAAGECKDpQKMVPKAINSVI 261
Cdd:TIGR00905 167 FLFIIIG-WFWFKLDLFTADFWG-HDVPSLGSVFSQVKNTMLV----TLWVFIGIEGAVVSSGRAKN-KSDVGKATVLGT 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  262 WRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGS-IMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAP 340
Cdd:TIGR00905 240 LGALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAvLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFP 319
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446779845  341 KFMAKMSRQHVPYAGILATLVVYVVGVFLNYLvPSRVFEIVLNFASLGIIASWAFIMVCQMRL 403
Cdd:TIGR00905 320 KIFGRVNKNGAPSVALLLTNILIQLFLLLTLL-TSSAYNVLVSLAVVMILVPYLLSAAYLLKL 381
frlA PRK11357
amino acid permease;
24-319 2.51e-06

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 49.85  E-value: 2.51e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  24 EGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV--YLICGIFSFFILRALGELVLHRPSSGSFVSYAREF 101
Cdd:PRK11357   4 QELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVlaFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 102 LGEKAAYVAGWMYFinWAmTGIVDITAVAL----YMHYWGAFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIK 177
Cdd:PRK11357  84 GSRPLAFLSGWASF--WA-NDAPSLSIMALaivsNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 178 VLAIVIFLVVGTIFLGTGQPLEGNATGfhlITDNGGFfphglLPALVLIQGVVFAFASIELVGTAAGECKDPQKMVPKAI 257
Cdd:PRK11357 161 IIPFTIVIGLGIFWFKAENFAAPTTTA---IGATGSF-----MALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRAL 232
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446779845 258 NSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKlgVPYIGS-------IMNIVVLTAALSSL 319
Cdd:PRK11357 233 IGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTW--IPALGStagifvaITAMIVILGSLSSC 299
PRK10644 PRK10644
arginine/agmatine antiporter;
35-368 3.84e-03

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 39.77  E-value: 3.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845  35 VQMIAIGGAIGTGLFLgAGARLQMAGPALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMY 114
Cdd:PRK10644  15 VTLMVAGNIMGSGVFL-LPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLY 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 115 -FINWAMTGIVDITAVALYMHYWGAFGDvpQWVFALGALTIVGT---MNMIGVKWFAEMEFW---FALIKVLAIVI---F 184
Cdd:PRK10644  94 wLACWIGNIAMVVIGVGYLSYFFPILKD--PLVLTITCVVVLWIfvlLNIVGPKMITRVQAVatvLALIPIVGIAVfgwF 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 185 LVVGTIFLGtGQPLEGNATgFHLITDNGGFfphgllpalvliqgVVFAFASIELVGTAAGECKDPQKMVPKAINSVIWRI 264
Cdd:PRK10644 172 WFRGETYMA-AWNVSGLGT-FGAIQSTLNV--------------TLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIA 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446779845 265 GLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFMA 344
Cdd:PRK10644 236 AVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFA 315
                        330       340
                 ....*....|....*....|....
gi 446779845 345 KMSRQHVPYAGILATLVVYVVGVF 368
Cdd:PRK10644 316 RVNKAGTPVAGLLIVGVLMTIFQL 339
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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