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Conserved domains on  [gi|446750564|ref|WP_000827820|]
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MULTISPECIES: long polar fimbria major subunit LpfA-O113 [Escherichia]

Protein Classification

fimbrial protein( domain architecture ID 10015040)

fimbrial protein similar to Salmonella enterica long polar fimbria protein A (LpfA)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
lpfA PRK15289
fimbrial protein; Provisional
 1-190 2.52e-115

fimbrial protein; Provisional


:

Pssm-ID: 185189  Cd Length: 190  Bit Score: 325.37  E-value: 2.52e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIGGAITLASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCP 80
Cdd:PRK15289   1 MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  81 ATYTQAAVRFDGTEAPGGDGDLKVGTPLTSGTPGDFTGTGQAIAATGVGIRIFNRADNSQVKLYNDSAYSTIDADGKAEM 160
Cdd:PRK15289  81 ATYTQAAVRFDGTEAPGGDGDLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEM 160

                        170       180       190
                 ....*....|....*....|....*....|
gi 446750564 161 KFIARYVATNTTVTAGTANADSQFTVEYKK 190
Cdd:PRK15289 161 KFIARYVATNATVTAGTANADSQFTVEYKK 190
 
Name Accession Description Interval E-value
lpfA PRK15289
fimbrial protein; Provisional
 1-190 2.52e-115

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 325.37  E-value: 2.52e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIGGAITLASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCP 80
Cdd:PRK15289   1 MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  81 ATYTQAAVRFDGTEAPGGDGDLKVGTPLTSGTPGDFTGTGQAIAATGVGIRIFNRADNSQVKLYNDSAYSTIDADGKAEM 160
Cdd:PRK15289  81 ATYTQAAVRFDGTEAPGGDGDLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEM 160

                        170       180       190
                 ....*....|....*....|....*....|
gi 446750564 161 KFIARYVATNTTVTAGTANADSQFTVEYKK 190
Cdd:PRK15289 161 KFIARYVATNATVTAGTANADSQFTVEYKK 190
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-189 1.11e-46

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 150.96  E-value: 1.11e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIggAITLASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCP 80
Cdd:COG3539    1 MKKLLL--ALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCD 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  81 ATYTQAA-VRFDGTEAPGGDGDLKVgtpltsgtpgdfTGTGqaiAATGVGIRIFNrADNSQVKLYNDSAYSTIDADGKAE 159
Cdd:COG3539   79 AGTSNSVkVTFTGTADSANPGLLAN------------TGSG---GASGVGIQLLD-SDGTPIPLGTPSSAVTLTSNGSAT 142

                        170       180       190
                 ....*....|....*....|....*....|
gi 446750564 160 MKFIARYVATNTTVTAGTANADSQFTVEYK 189
Cdd:COG3539  143 LPFYARYVATGATVTAGSFNATATFTIDYQ 172
Fimbrial pfam00419
Fimbrial protein;
28-189 1.35e-13

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 65.15  E-value: 1.35e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   28 VHFVGEI--VDSTCEVTSDTADqTVPLGKVSKSAFSGVGSLASPQQFSIKLE-NCPATYTQAAVRFDGTEAPGGDGDLKV 104
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLEcSSGSSAVKVTVGLFGTADASSPNLLLT 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  105 GTPltsgtpgdftgtgqAIAATGVGIRIFNRADNSQVklYNDSAYSTIDADGKAEMK---FIARYVATNT-TVTAGTANA 180
Cdd:pfam00419  80 GNG--------------AGAATGVGIRLYDANGGALP--PNNGTSSIPVSATAAVATgitFTASLVATTGgTPTAGDFNA 143


                  ....*....
gi 446750564  181 DSQFTVEYK 189
Cdd:pfam00419 144 TATIVVDYQ 152
 
Name Accession Description Interval E-value
lpfA PRK15289
fimbrial protein; Provisional
 1-190 2.52e-115

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 325.37  E-value: 2.52e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIGGAITLASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCP 80
Cdd:PRK15289   1 MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  81 ATYTQAAVRFDGTEAPGGDGDLKVGTPLTSGTPGDFTGTGQAIAATGVGIRIFNRADNSQVKLYNDSAYSTIDADGKAEM 160
Cdd:PRK15289  81 ATYTQAAVRFDGTEAPGGDGDLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEM 160

                        170       180       190
                 ....*....|....*....|....*....|
gi 446750564 161 KFIARYVATNTTVTAGTANADSQFTVEYKK 190
Cdd:PRK15289 161 KFIARYVATNATVTAGTANADSQFTVEYKK 190
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-189 1.11e-46

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 150.96  E-value: 1.11e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIggAITLASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCP 80
Cdd:COG3539    1 MKKLLL--ALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCD 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  81 ATYTQAA-VRFDGTEAPGGDGDLKVgtpltsgtpgdfTGTGqaiAATGVGIRIFNrADNSQVKLYNDSAYSTIDADGKAE 159
Cdd:COG3539   79 AGTSNSVkVTFTGTADSANPGLLAN------------TGSG---GASGVGIQLLD-SDGTPIPLGTPSSAVTLTSNGSAT 142

                        170       180       190
                 ....*....|....*....|....*....|
gi 446750564 160 MKFIARYVATNTTVTAGTANADSQFTVEYK 189
Cdd:COG3539  143 LPFYARYVATGATVTAGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 21-189 7.16e-24

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 92.34  E-value: 7.16e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  21 ALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCP-ATYTQAAVRFDGTeapgGD 99
Cdd:PRK15209  21 AESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDiTTNKKVNVSFNGV----GD 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564 100 GDlkvgtpltsgTPGDFTGTGQAIAATGVGIRIFNRAdNSQVKLyNDSAYSTIDADGKAEMKFIARYVATNTTVTAGTAN 179
Cdd:PRK15209  97 AD----------DSTLVSVSTEAGAATGVGIGIYDNA-NTLVEL-NTGKSTTTLAAGQTVLYFTANYVSTKDTVTTGYGN 164

                        170
                 ....*....|
gi 446750564 180 ADSQFTVEYK 189
Cdd:PRK15209 165 AEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
11-189 5.84e-23

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 90.40  E-value: 5.84e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  11 TLASLML-AGNALAED--------GVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENC-P 80
Cdd:PRK15194   9 AIASLLFvAGAAYAADptpvsvdgGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCdP 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  81 ATYTQAAVRFDGTEAPGGDGDLKVgtpltsgTPGDFTGTgqaiaATGVGIRIFnraDNSQVKLYNDSA-YSTIDA--DGK 157
Cdd:PRK15194  89 VVAATAAVAFSGQADATNDNLLAV-------ASSTNTTT-----ATGVGIEIL---DNTSSILKPDGAtFSANQNliEGT 153

                        170       180       190
                 ....*....|....*....|....*....|..
gi 446750564 158 AEMKFIARYVATNTTVTAGTANADSQFTVEYK 189
Cdd:PRK15194 154 NTLHFSARYKATGTSASAGQANADATFIMKYE 185
PRK09934 PRK09934
fimbriae assembly protein;
10-188 1.45e-18

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 78.39  E-value: 1.45e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  10 ITLASLMLAGNALAEDGV----VHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCPAtyTQ 85
Cdd:PRK09934   7 ACFCGLLWSPLSWAADPLgeinIELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP--GS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  86 AAVRFDGTEAPGgdgdlkvgtpltsgtpGDFTGTGQAIAATGVGIRIFNrADNSQVKLYNDSAYSTIDADGKAEMKFIAR 165
Cdd:PRK09934  85 ASITFTGTPASD----------------TNLLALDDPAMAQTVAIEIRD-SDRSRLALGQASPTVEVDANGNATLNFYAN 147

                        170       180
                 ....*....|....*....|...
gi 446750564 166 YVATNTTVTAGTANADSQFTVEY 188
Cdd:PRK09934 148 YIALADGVQPGVAKADATFMINY 170
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 1-189 6.08e-16

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 71.81  E-value: 6.08e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIGGAITL--ASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADqtVPLGKVSKSAFSGVGSLASPQQFSIKLEN 78
Cdd:PRK15205   3 NKRALLPLALLLltASGMAAPTDLGPAGDIHFTITIKAKACELEKDSLE--VDMGTMVLQKPVKVGTELNQKNFSIGLKD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  79 CpATYTQAAVRFDGTEAPGGDGDLKvgtpLTSGtpgdftgtgqaiAATGVGIRIfnrADNSQVKLYNDSAYST-----ID 153
Cdd:PRK15205  81 C-DGISKASVTMDGSPDPDDPSLFA----LDAG------------GATGVALKI---KTSKGTQQYPKSTDGTpvewaIN 140

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 446750564 154 ADGKAEMKFIARYVATNTTVTAGTANADSQFTVEYK 189
Cdd:PRK15205 141 GDGTTQLNYIASYVPVNADATVGTANATVNFSVTYE 176
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 1-188 1.62e-14

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 68.20  E-value: 1.62e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIGGAITLASLMLAGNALAE---DGVVHFVGEIVDSTCEVTSDTADqtVPLGKVSKSAFSGVGSLASPQQFSIKLE 77
Cdd:PRK15300   1 MKLSLKTLTVALAAITLSPAALADtakDGTVHITGLIKQNACTVKTDSVE--VTLQEEFASLFTAAGQTAGDTDFTIELE 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  78 NCPAT-YTQAAVRFDGTeapggdgdlkvgtplTSGTpgDFTGTGQAIAATGVGIRIFNRADNSQVklYND-----SAYST 151
Cdd:PRK15300  79 NCDANvYSSVQARFEGT---------------LDGT--DATILKNEDDAENIGVQILDKTSTPMT--FNDlqawsAAVAL 139

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 446750564 152 IDADGKAE--MKFIARYVATNTTVTAGTANADSQFTVEY 188
Cdd:PRK15300 140 PTAEGVTElsMPFTARYIATAVPVKSGTVDATATFYLQY 178
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
10-188 3.73e-14

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 67.19  E-value: 3.73e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  10 ITLASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQ-QFSIKLENCPA-TYTQAA 87
Cdd:PRK15200  11 LVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSvPFSLRLISCSAeVWRHVG 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  88 VRFDGTeAPGGDgdlkvgtpltsgtPGDFTGTGQAIAATGVGIRIFnraDNSQVKLYNDSA---YSTIDADgKAEMKFIA 164
Cdd:PRK15200  91 IAFAGV-TPAED-------------PHVFLASGEGIGNAGIGLALF---DDQQRQIIPNTLplhYAPILTS-EMTLHFTA 152

                        170       180
                 ....*....|....*....|....
gi 446750564 165 RYVATNTTVTAGTANADSQFTVEY 188
Cdd:PRK15200 153 RYRAISENMTPGRIHSEVWFTLVY 176
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 1-189 5.45e-14

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 66.66  E-value: 5.45e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIGGaitLASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCP 80
Cdd:PRK15191   1 MRNDILYG---IGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCG 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  81 ATYTQAAVRFDGteapGGDGDLKVGTPLTSGTPGdftgtgqaiaATGVGIRIFNRaDNSQVKLYNDSAYSTID-ADGKAE 159
Cdd:PRK15191  78 STASGVTVSFSG----AADSRNTDLLALTAGESD----------ASGIGIALYDQ-NKTLIPLGQESDVVTLSpGQASAH 142

                        170       180       190
                 ....*....|....*....|....*....|
gi 446750564 160 MKFIARYVATNTTVTAGTANADSQFTVEYK 189
Cdd:PRK15191 143 LQFYARYLADGGAVTPGDANASATFILAYE 172
PRK09733 PRK09733
fimbrial-like protein;
13-189 1.29e-13

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 65.74  E-value: 1.29e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  13 ASLMLAGNALAEDG--VVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAF-SGVGSLASPqqFSIKLENC-----PATYT 84
Cdd:PRK09733  11 VAMILSNNVFADEGhgIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLkSDQKSLAEP--FTIHLQDCmlsqgGTTYS 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  85 QAAVRFDGTEAPGGDGDLkvgtpLTSGTPGDFTGtgqaiaATGVGIRIFNrADNSQVKLYNDSAYSTIDADGKAEMKFIA 164
Cdd:PRK09733  89 KAKVTFTTANTMTGQSDL-----LKNTKETEIGG------ATGVGVRILD-SQSGEVTLGTPVVITFNNTNSYQELNFKA 156

                        170       180
                 ....*....|....*....|....*
gi 446750564 165 RYVATNTTVTAGTANADSQFTVEYK 189
Cdd:PRK09733 157 RMESPSKDATPGNVYAQADYKIAYE 181
Fimbrial pfam00419
Fimbrial protein;
28-189 1.35e-13

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 65.15  E-value: 1.35e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   28 VHFVGEI--VDSTCEVTSDTADqTVPLGKVSKSAFSGVGSLASPQQFSIKLE-NCPATYTQAAVRFDGTEAPGGDGDLKV 104
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLEcSSGSSAVKVTVGLFGTADASSPNLLLT 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  105 GTPltsgtpgdftgtgqAIAATGVGIRIFNRADNSQVklYNDSAYSTIDADGKAEMK---FIARYVATNT-TVTAGTANA 180
Cdd:pfam00419  80 GNG--------------AGAATGVGIRLYDANGGALP--PNNGTSSIPVSATAAVATgitFTASLVATTGgTPTAGDFNA 143


                  ....*....
gi 446750564  181 DSQFTVEYK 189
Cdd:pfam00419 144 TATIVVDYQ 152
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 26-188 7.51e-12

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 60.99  E-value: 7.51e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  26 GVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQ-FSIKLENCPATYTQ-AAVRFDGTEapggdgdlk 103
Cdd:PRK15187  32 GTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVANQKEdFTIKLEDCDTQTSQnAAVIFNGQQ--------- 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564 104 vgtplTSGTPGDFTGTGQAIAATGVGIRIFNrADNSQVKLYNDSAYSTIDaDGKAEMKFIARYVATNTTvTAGTANADSQ 183
Cdd:PRK15187 103 -----DANQPGSLANTAGAGSATNVALQLYG-PDGQALNIGESSSTVTLN-DGENVIPLSVDYIATGTA-TAGNVTATAT 174


                 ....*
gi 446750564 184 FTVEY 188
Cdd:PRK15187 175 FSMVY 179
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 28-189 1.12e-11

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 60.48  E-value: 1.12e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  28 VHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCPATYTQAAVRFDGTEAPGGDGDLKVGTp 107
Cdd:PRK15190  30 LEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAGAKIWFTGEPDPDNPALLAITD- 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564 108 ltsgtpgdfTGTGQA-IAATGVGIRIFNRaDNSQVKLYN-DSAYSTIDAdGKAEMKFIARYVATNTTVTAGTANADSQFT 185
Cdd:PRK15190 109 ---------TGMGSGnMLASGVGVEILND-DQDTISINNaDSVVYPLKA-GRNTLSFYIRYKSTRPTVTSGNATAVMYFD 177


                 ....
gi 446750564 186 VEYK 189
Cdd:PRK15190 178 MQYE 181
PRK15210 PRK15210
fimbrial protein;
3-188 2.95e-10

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 57.02  E-value: 2.95e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   3 RNIIGGAITLASLMLAGNALAED----------GVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGVGSLASPQQF 72
Cdd:PRK15210   2 RNKIILAMAAAGMMYGASVFAADttptagpfgsGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  73 SIKLENCpatytqaAVRFDGTEAPGGDGDLKVGTPLTSGTPGD----FTGTGqaiAATGVGIRIFnRADNSQVKLYN--- 145
Cdd:PRK15210  82 TIHLQNC-------AFDPNIPDTAGSAGKMSKVTVSFSGTANTskkaYTTSG---SAQHVGVQLL-KSDNTSIIEPNtpm 150

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 446750564 146 -DSAYSTIDAdGKAEMKFIARYVATNTTVTAGTANADSQFTVEY 188
Cdd:PRK15210 151 pDGDAQQLQA-GNNELNFFARLIALDNGVTPGDFNASVTYTLKY 193
PRK15296 PRK15296
fimbrial protein SthA;
7-189 2.02e-08

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 51.63  E-value: 2.02e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   7 GGAITLASLM-LAGNALAEDGVVHFVGEIVDSTCEVTSD-TADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCPATY- 83
Cdd:PRK15296   4 KKIIILAMLTaVASTPVFAQNTITFNGKIYDQACTVQVNgSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPEAGt 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  84 ---TQAAVRFDGTEapggDGDlkvgtpltSGTPGDFTGTGQAIAATGVGIRIFNrADNSQVKLYNDSAYSTIDADG-KAE 159
Cdd:PRK15296  84 gvpTQAMFRFHGAT----DDS--------NPTYFKNADEGSETGAAGVGISIQN-ASHSDVTDNTDDAAVNLPTDGsTAD 150

                        170       180       190
                 ....*....|....*....|....*....|.
gi 446750564 160 MKFIARYVATNT-TVTAGTANADSQFTVEYK 189
Cdd:PRK15296 151 FTYYAAMANDGSaTVTGGDVSTQVTYTVSYQ 181
PRK15293 PRK15293
fimbrial protein SthD;
32-189 1.04e-06

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 46.98  E-value: 1.04e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  32 GEIVDSTCEVTsdtADQTVPLGKVSKSAFSGVGSLASPQQFSIKLENCPATYTQAAVRFDGTEAPGGdgdlKVGTPLTSG 111
Cdd:PRK15293  41 GLIYADPCTVT---VPDTLSLGQYARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFNGVPYPDP----NYASAIYAN 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564 112 TPGDftgtgqaiAATGVGIRIFNRADNSQVKLYNDSAYST-IDADG-KAEMKFIARYVATNTTVTAGTANADSQFTVEYK 189
Cdd:PRK15293 114 SAAN--------PAQDLGLQLFNLDGKSLVNLANNVTYTVdINSNThEANLPVAARMYTPYGKVTAGDFTSVVTITIAWQ 185
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 1-189 1.85e-06

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 46.19  E-value: 1.85e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   1 MKRNIIGGAITL-ASLMLAGNALAEDGVVHFVGEIVDSTCEVT------SDTADQTVPLGKVSKSAFS---GVGSLASPQ 70
Cdd:PRK15307   3 LKKYGLAAAVAMtLSASSAMAADPDTGTITFHGLVTNNTCNISldnkidQDGNDFDITLPTVFVKDFAtalGVNSTLGEK 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  71 QFSIKLENCP-ATYTQAAVRFDgteAPGGDGDLKVGTPLTSgtpgdftgTGQAIAATGVGIRIFNRA----DNSQVKLYN 145
Cdd:PRK15307  83 QFTLNLSECDnATLKDASAQFN---SWGGSSATSGGLLVPP--------ANLQGSATNVNLVLANNGntatDLIKIDQPN 151

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 446750564 146 DSAYSTIDADGKAEMKFIARYV------ATNTTVTAGTANADSQFTVEYK 189
Cdd:PRK15307 152 NTQKATISTDGTGDLFYRVAYTqgqkwnADTSPVTSGTVQAQVAFTMIYN 201
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 28-188 1.38e-05

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 44.00  E-value: 1.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  28 VHFVGEIVDSTCEVTSDTADQTVPLGKV--SKSAFSGVGSLASPQQFSIKLENCP-ATYTQAAVRF---DGTEAPGGDGD 101
Cdd:PRK15261  33 VTFLGNIVDSPCSVTLDTEDQTVNMGSSigNGTLSNGKTTINNARTFHIDLEGCTwATEKNMNVVFttgSGTTAATGATD 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564 102 lKVGTPLTSGTpGDFTGTGQAIAATGvgirifnradNSQVKLYNDSAYSTIDADG------KAEMKFIARYVATNT-TVT 174
Cdd:PRK15261 113 -NLALMKTDGT-GAISNVSLAIGDAG----------KNNIKLGDTYTQAIADLDGdtildeKQSLNFTAWLVGAATgTVG 180

                        170
                 ....*....|....
gi 446750564 175 AGTANADSQFTVEY 188
Cdd:PRK15261 181 TGEFSSAANVTISY 194
PRK15283 PRK15283
fimbrial major subunit StfA;
6-112 2.36e-03

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 37.44  E-value: 2.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564   6 IGGAITLASLMLAGNALAEDGVVHFVGEIVDSTCEVTSDTADQTVPLGKVSKSAFSGvGSLASPQQFSIKLENCPATYTQ 85
Cdd:PRK15283   9 VAAALVMGVSSFANAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMG-GKESSKVDFHIGLENCAFTTEK 87

                         90       100       110
                 ....*....|....*....|....*....|...
gi 446750564  86 ------AAVRFDGTEAPGGDGDLKVGTPLTSGT 112
Cdd:PRK15283  88 eastvfSAIGNESSANPGSVALMRIGGGEMAGS 120
PRK15292 PRK15292
type 1 fimbrial protein;
42-188 3.37e-03

type 1 fimbrial protein;


Pssm-ID: 237935 [Multi-domain]  Cd Length: 365  Bit Score: 37.24  E-value: 3.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564  42 TSDTADQTVPLGKVSKSAFSGVGSLASPQQfSIKLENCPATYTQAAVrfdgtEAPGGDGDLKVGTPLTsgtpgdFTGTGQ 121
Cdd:PRK15292 200 RVETPALTFDMGSINAGSFANSQTVGTAEQ-DILLSCEPGTNVSASV-----SAQPASGDNPDNTVIA------LSNASA 267

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446750564 122 AIAATGVGIRI-FNRAD----------NSQVKLYNDSaySTIDADGKAE---------------------MKFIARYVAT 169
Cdd:PRK15292 268 PTSATGVGVQLnIQAPDagfftdslpiNTKIDLFTST--RTTNADGSQTvsysyftnpdspggamnmsttLKISANYYKT 345

                        170
                 ....*....|....*....
gi 446750564 170 NTTVTAGTANADSQFTVEY 188
Cdd:PRK15292 346 GATVTAGQANATGTLTLTY 364
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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