|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
1-524 |
9.06e-165 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 477.69 E-value: 9.06e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 1 MKQKKA--WSFFQSLGKAFMYPIALLSVCGMMLGLGSGLASDDMAKLIPFLAIPIIKTILDFIVSLGLFAFVNLPVLFAI 78
Cdd:PRK10110 4 KTAPKVtlWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPFLGNPVLQAIFTWMSKIGSFAFSFLPVMFCI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 79 AIPLGLLKdkEDKAYGAFSGLIGFMAMHLGTNFYLKQHDLLVVAD--QMSTHGQTIILGIQSYNTSVLGGIVAGLLVASM 156
Cdd:PRK10110 84 AIPLGLAR--ENKGVAAFAGFVGYAVMNLAVNFWLTNKGILPTTDaaVLKANNIQSILGIQSIDTGILGAVIAGIIVWML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 157 YKKIVNLRIPESLGFYSGPRLVPIITLIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGPVGYFFYAVAERVTIPFGLNH 236
Cdd:PRK10110 162 HERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHH 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 237 LVTSVFRFTPIGGSAVIGGEEYYGTLNMFMAYVKENAVIPLDLAGK--MEQGKL-MIQYGLAGAALAMYRTAHAQNRKAI 313
Cdd:PRK10110 242 ILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATrfLSQGKMpAFLGGLPGAALAMYHCARPENRHKI 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 314 KALLISGVLTVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGVKMGFT-GDLIQFISFGVLRGTRTGWPIAV 392
Cdd:PRK10110 322 KGLLISGVIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTdGNIIDFVVFGILHGLSTKWYMVP 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 393 CVEVAYFFIYYFVFRWTILKFNLMTVGREESSpvtlNAHEDTAIADIPTPDKSELQAaeqMVKALGGKENIKSLDNCVTR 472
Cdd:PRK10110 402 VVAAIWFVVYYVIFRFAITRFNLKTPGRDSEV----ASSIEKAVAGAPGKSGYNVPA---ILEALGGADNIVSLDNCITR 474
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 446733298 473 LRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKVIALRRDMDNYMG 524
Cdd:PRK10110 475 LRLSVKDMSLVDVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLMH 526
|
|
| PTS-II-BC-nag |
TIGR01998 |
PTS system, N-acetylglucosamine-specific IIBC component; This model represents the combined B ... |
9-512 |
6.27e-95 |
|
PTS system, N-acetylglucosamine-specific IIBC component; This model represents the combined B and C domains of the PTS transport system enzyme II specific for N-acetylglucosamine transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, N-acetylglucosamine-specific IIABC component". This family is most closely related to the glucose-specific PTS enzymes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273920 [Multi-domain] Cd Length: 475 Bit Score: 296.68 E-value: 6.27e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 9 FFQSLGKAFMYPIALLSVCGMMLGLGSGLASDDMAklipflaipiiktILDFIVSLGLFAFVNLPVLFAIAIPLGLLKDK 88
Cdd:TIGR01998 4 YFQKLGRALMLPIATLPVAALLLRIGNATHGADLL-------------VANFFIAAGGAIFDNLGLLFAIGVAIGMSKDN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 89 EDKAygAFSGLIGFmamhlgtnFYLKQHDLLVVADQMSTHGQTIILGIQSYNtSVLGGIVAGLLVASMYKKIVNLRIPES 168
Cdd:TIGR01998 71 DGAA--ALAGLVAY--------FVVTKVLSPPPLAAALGIKSEINMAFSAWK-NVFVGILAGLIAGALYNRFSEIKLPEA 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 169 LGFYSGPRLVPIITLIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGPVGYFFYAVAERVTIPFGLNHLVTSVFRFTPIG 248
Cdd:TIGR01998 140 LSFFSGKRLVPIMAGFVGLVLAALLGYVWPTLYGGIVAFGESISGLGALGAGIYGFLNRLLIPTGLHHALNSVFWFDVAG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 249 ----GSAVIGGE--EYYGTLNMFMAyvkenAVIPLdlagkmeqgklmIQYGLAGAALAMYRTAHAQNRKAIKALLISGVL 322
Cdd:TIGR01998 220 indfGNFTGGGDlnRFKGIAGMFMA-----GFFPI------------MMFGLPAAALAMYHTARPERRKQVGGMLLSVAF 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 323 TVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGVKMG--FTGDLIQFI-SFGvlRGTRTGWPIAVCVEVAYF 399
Cdd:TIGR01998 283 ASFLTGVTEPLEFSFMFLAPVLYALHALLTGLSLFIAAMLHWTAGfsFSAGLIDYVlSFN--NPTANQPLMLLVQGLVFF 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 400 FIYYFVFRWTILKFNLMTVGREESSPVTLNAHEDTAIADiptpdkSELQAAEQMVKALGGKENIKSLDNCVTRLRLTIAD 479
Cdd:TIGR01998 361 ALYYVVFRFAIRRFNLKTPGREDEDPEGATAAAVTSTGD------SKMQLAKQYLAALGGHDNLVSIDACITRLRLTLKD 434
|
490 500 510
....*....|....*....|....*....|...
gi 446733298 480 MGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKV 512
Cdd:TIGR01998 435 TSIVDEPALKALGARGVVKLGKHNLQVILGPLA 467
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
2-514 |
1.58e-62 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 211.72 E-value: 1.58e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 2 KQKKAWSFFQSLGKAFMYPIALLSVCGMMLGLGSGLASDDMaklipFLAIPIIKTILDFIVSLGLFAFVNLPVLFAIAIP 81
Cdd:COG1263 4 KKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGL-----LGEGSFLSGTYQILNAAGDAVFYFLPLLFAIGAA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 82 LGLlkdkedKAYGAFSGLIGFMAMHLGTNfylkqhDLLVVADqmsthGQTIILGIQ---SYNTSVLGGIVAGLLVASMYK 158
Cdd:COG1263 79 KGF------GGNPALAAVIGYLLVHPTLL------NAYAVAG-----GYISFLGIPtliGYQGGVFPGILAGWLAAYLEK 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 159 KIvNLRIPESLGFYsgprLVPIITLIVMSGFGL-IIPFIWPPFFN-LFMLIGHWISTSGPVGYFFYAVAERVTIPFGLNH 236
Cdd:COG1263 142 FL-KKKLPDALGFF----FVPILTLLIMVPLALlVIGPIWPPIGNgIAAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHH 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 237 LVTSVFRFtPIGGsavIGGEEYYGTLNMFMAyvkenavipldlagkmeqgklmiqyGLAGAALAMYRTAhaQNRKAIKAL 316
Cdd:COG1263 217 GLNPIFWF-LLGG---TGDDGLFPILAAAMF-------------------------GQPGAALAVYLKA--KPNKKVKGL 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 317 LISGVLTVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGVK---MGFTGdLIQFISFgvLRGTRTGWPIAVc 393
Cdd:COG1263 266 AISAALTAFLTGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKafsFGVGG-LIDFPSI--LNPGATNLLLYL- 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 394 VEVAYFFIYYFVFRWTIlkfnlmtvGREesspvtlnahEDTAIADIPTPDKSELQAAEQMVKALGGKENIKSLDNCVTRL 473
Cdd:COG1263 342 IGLVIAFVYYFVFTFLI--------GRE----------DEEEEEKLATKADAKKEEAEAAAAALGGGGGLLLLEADITVL 403
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 446733298 474 RLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKVIA 514
Cdd:COG1263 404 LLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGG 444
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
14-353 |
8.72e-56 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 189.48 E-value: 8.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 14 GKAFMYPIALLSVCGMMLGLGSglaSDDMAKLIPFLAIPIIKTILDFIVSLGLFAFVNLPVLFAIAIPLGLLKDKedkAY 93
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGN---LPNDTTGLPAGGFTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLAGGD---GV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 94 GAFSGLIGFMAMHL--GTNFYLKQHDLlvvadqmstHGQTIILGIQSYNTSVLGGIVAGLLVASMYKKIVN---LRIPES 168
Cdd:pfam02378 75 AGAAGLIGLLSFNLaaAISVALTAAGL---------SGGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKnitIKLPDS 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 169 LGFYSGPRLVPIIT-LIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGP-VGYFFYAVAERVTIPFGLNHLVTSVFRFTP 246
Cdd:pfam02378 146 LPFFVGKRFVPIITgFVTLLVIGPVLGLIWPAIQGGLNALGLLLIIAGGiLGGLIFGFLERLLWPFGLHGAFIAIFWFLP 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 247 IGGSAVIGGEEYYGtlnmfmayvkenaviplDLAGKMEQGKLMIQYGLAGAALAMYRTAHAQNRKAIKALLISGVLTVII 326
Cdd:pfam02378 226 IGGSNPIANQQAYG-----------------AGAAHILTGGFDVMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPFL 288
|
330 340
....*....|....*....|....*..
gi 446733298 327 GGVSEPIEFLFLFVSPLLFVFHAFMNG 353
Cdd:pfam02378 289 FGITEPLEFGFPFVLNPPFFIPAILAG 315
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
448-512 |
5.39e-27 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 103.77 E-value: 5.39e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446733298 448 QAAEQMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKV 512
Cdd:cd00212 2 QLAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGV 66
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
1-524 |
9.06e-165 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 477.69 E-value: 9.06e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 1 MKQKKA--WSFFQSLGKAFMYPIALLSVCGMMLGLGSGLASDDMAKLIPFLAIPIIKTILDFIVSLGLFAFVNLPVLFAI 78
Cdd:PRK10110 4 KTAPKVtlWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPFLGNPVLQAIFTWMSKIGSFAFSFLPVMFCI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 79 AIPLGLLKdkEDKAYGAFSGLIGFMAMHLGTNFYLKQHDLLVVAD--QMSTHGQTIILGIQSYNTSVLGGIVAGLLVASM 156
Cdd:PRK10110 84 AIPLGLAR--ENKGVAAFAGFVGYAVMNLAVNFWLTNKGILPTTDaaVLKANNIQSILGIQSIDTGILGAVIAGIIVWML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 157 YKKIVNLRIPESLGFYSGPRLVPIITLIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGPVGYFFYAVAERVTIPFGLNH 236
Cdd:PRK10110 162 HERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHH 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 237 LVTSVFRFTPIGGSAVIGGEEYYGTLNMFMAYVKENAVIPLDLAGK--MEQGKL-MIQYGLAGAALAMYRTAHAQNRKAI 313
Cdd:PRK10110 242 ILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATrfLSQGKMpAFLGGLPGAALAMYHCARPENRHKI 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 314 KALLISGVLTVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGVKMGFT-GDLIQFISFGVLRGTRTGWPIAV 392
Cdd:PRK10110 322 KGLLISGVIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTdGNIIDFVVFGILHGLSTKWYMVP 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 393 CVEVAYFFIYYFVFRWTILKFNLMTVGREESSpvtlNAHEDTAIADIPTPDKSELQAaeqMVKALGGKENIKSLDNCVTR 472
Cdd:PRK10110 402 VVAAIWFVVYYVIFRFAITRFNLKTPGRDSEV----ASSIEKAVAGAPGKSGYNVPA---ILEALGGADNIVSLDNCITR 474
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 446733298 473 LRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKVIALRRDMDNYMG 524
Cdd:PRK10110 475 LRLSVKDMSLVDVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLMH 526
|
|
| PTS-II-BC-nag |
TIGR01998 |
PTS system, N-acetylglucosamine-specific IIBC component; This model represents the combined B ... |
9-512 |
6.27e-95 |
|
PTS system, N-acetylglucosamine-specific IIBC component; This model represents the combined B and C domains of the PTS transport system enzyme II specific for N-acetylglucosamine transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, N-acetylglucosamine-specific IIABC component". This family is most closely related to the glucose-specific PTS enzymes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273920 [Multi-domain] Cd Length: 475 Bit Score: 296.68 E-value: 6.27e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 9 FFQSLGKAFMYPIALLSVCGMMLGLGSGLASDDMAklipflaipiiktILDFIVSLGLFAFVNLPVLFAIAIPLGLLKDK 88
Cdd:TIGR01998 4 YFQKLGRALMLPIATLPVAALLLRIGNATHGADLL-------------VANFFIAAGGAIFDNLGLLFAIGVAIGMSKDN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 89 EDKAygAFSGLIGFmamhlgtnFYLKQHDLLVVADQMSTHGQTIILGIQSYNtSVLGGIVAGLLVASMYKKIVNLRIPES 168
Cdd:TIGR01998 71 DGAA--ALAGLVAY--------FVVTKVLSPPPLAAALGIKSEINMAFSAWK-NVFVGILAGLIAGALYNRFSEIKLPEA 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 169 LGFYSGPRLVPIITLIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGPVGYFFYAVAERVTIPFGLNHLVTSVFRFTPIG 248
Cdd:TIGR01998 140 LSFFSGKRLVPIMAGFVGLVLAALLGYVWPTLYGGIVAFGESISGLGALGAGIYGFLNRLLIPTGLHHALNSVFWFDVAG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 249 ----GSAVIGGE--EYYGTLNMFMAyvkenAVIPLdlagkmeqgklmIQYGLAGAALAMYRTAHAQNRKAIKALLISGVL 322
Cdd:TIGR01998 220 indfGNFTGGGDlnRFKGIAGMFMA-----GFFPI------------MMFGLPAAALAMYHTARPERRKQVGGMLLSVAF 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 323 TVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGVKMG--FTGDLIQFI-SFGvlRGTRTGWPIAVCVEVAYF 399
Cdd:TIGR01998 283 ASFLTGVTEPLEFSFMFLAPVLYALHALLTGLSLFIAAMLHWTAGfsFSAGLIDYVlSFN--NPTANQPLMLLVQGLVFF 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 400 FIYYFVFRWTILKFNLMTVGREESSPVTLNAHEDTAIADiptpdkSELQAAEQMVKALGGKENIKSLDNCVTRLRLTIAD 479
Cdd:TIGR01998 361 ALYYVVFRFAIRRFNLKTPGREDEDPEGATAAAVTSTGD------SKMQLAKQYLAALGGHDNLVSIDACITRLRLTLKD 434
|
490 500 510
....*....|....*....|....*....|...
gi 446733298 480 MGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKV 512
Cdd:TIGR01998 435 TSIVDEPALKALGARGVVKLGKHNLQVILGPLA 467
|
|
| PRK11089 |
PRK11089 |
PTS system glucose-specific transporter subunits IIBC; Provisional |
4-523 |
1.32e-88 |
|
PTS system glucose-specific transporter subunits IIBC; Provisional
Pssm-ID: 182955 [Multi-domain] Cd Length: 477 Bit Score: 280.45 E-value: 1.32e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 4 KKAWSFFQSLGKAFMYPIALLSVCGMMLGLGSglasddmaklIPFLAIPIIktILDFIVSLGLFAFVNLPVLFAIAIPLG 83
Cdd:PRK11089 3 KNAFANLQKVGKSLMLPVSVLPIAGILLGVGS----------ANFSWLPAV--VSHVMAEAGGSVFANMPLIFAIGVALG 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 84 LLKDKEDKAYGAFSGLiGFMAMHLGtnfylkqhdllVVADQMSTHGQTIILGIQSYNTSVLGGIVAGLLVASMYKKIVNL 163
Cdd:PRK11089 71 FTNNDGVSALAAVVAY-GIMVKTMA-----------VVAPLVLHLPAEEIAAKHLADTGVLGGIIAGAIAAYMFNRFYRI 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 164 RIPESLGFYSGPRLVPIITLIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGPVGYF-FYAVAERVTIPFGLNHLVTSVF 242
Cdd:PRK11089 139 KLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFgIYGFVERSLVPFGLHHIWNVPF 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 243 RFTpIGGSAVIGGEEYYGTLNMFMAyvkenaviPLDLAGKMEQGKLMIQYGLAGAALAMYRTAHAQNRKAIKALLISGVL 322
Cdd:PRK11089 219 QMQ-IGEYTNAAGQVFHGDIPRYMA--------GDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAAL 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 323 TVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGVKMG--FTGDLIQFIsfgVLRGTRTGWPIAVCVEVAYFF 400
Cdd:PRK11089 290 TSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGtsFSHGLIDFI---VLSGNSSKLWLFPIVGIGYAI 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 401 IYYFVFRWTILKFNLMTVGREESSpvtlnahedtaiADIPTPDKSELqaAEQMVKALGGKENIKSLDNCVTRLRLTIADM 480
Cdd:PRK11089 367 VYYTIFRVLIKALDLKTPGREDET------------EDAKATGTSEM--APALVAAFGGKENITNLDACITRLRVSVADV 432
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 446733298 481 GLIDEAAIKRAGGIAVVkLDQNTLQVIIGTKVIALRRDMDNYM 523
Cdd:PRK11089 433 SKVDQAGLKKLGAAGVV-VAGSGVQAIFGTKSDNLKTEMDEYI 474
|
|
| PRK10255 |
PRK10255 |
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional |
9-519 |
1.78e-63 |
|
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Pssm-ID: 182338 [Multi-domain] Cd Length: 648 Bit Score: 218.59 E-value: 1.78e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 9 FFQSLGKAFMYPIALLSVCGMMLGLGSGlasddmakliPFLAIPiiktildFIVSLGLFAFVNLPVLFAIAIPLGLLKDK 88
Cdd:PRK10255 6 FFQRLGRALQLPIAVLPVAALLLRFGQP----------DLLNVA-------FIAQAGGAIFDNLALIFAIGVASSWSKDS 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 89 EDKAygAFSGLIGFmamhlgtnfylkqhdlLVVADQMSTHGQTIilgiqsyNTSVLGGIVAGLLVASMYKKIVNLRIPES 168
Cdd:PRK10255 69 AGAA--ALAGAVGY----------------FVLTKAMVTINPEI-------NMGVLAGIITGLVGGAAYNRWSDIKLPDF 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 169 LGFYSGPRLVPIIT----LIVMSGFGliipFIWPPFFNLFMLIGHWISTSGPVGYFFYAVAERVTIPFGLNHLVTSVFRF 244
Cdd:PRK10255 124 LSFFGGKRFVPIATgffcLVLAAIFG----YVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWF 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 245 TpIGGSAVIGGEEYYGTLNMFMAyvkenavipldlaGKMEQGKLM------IQYGLAGAALAMYRTAHAQNRKAIKALLI 318
Cdd:PRK10255 200 Q-IGEFTNAAGTVFHGDINRFYA-------------GDGTAGMFMsgffpiMMFGLPGAALAMYFAAPKERRPMVGGMLL 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 319 SGVLTVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGVKMGFT---GDLIQFISFGVLRGTRTGWPIAVcVE 395
Cdd:PRK10255 266 SVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSfsaGAIDYALMYNLPAASQNVWMLLV-MG 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 396 VAYFFIYYFVFRWTILKFNLMTVGREESSP--VTLNAHEDTaiadiptpDKSELQAAEQMVKALGGKENIKSLDNCVTRL 473
Cdd:PRK10255 345 VVFFAIYFVLFSAVIRMFNLKTPGREDKEDeiVTEEANSNT--------EEGLTQLATNYIAAVGGTDNLKAIDACITRL 416
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 446733298 474 RLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKVIALRRDM 519
Cdd:PRK10255 417 RLTVADSARVNDAMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAM 462
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
2-514 |
1.58e-62 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 211.72 E-value: 1.58e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 2 KQKKAWSFFQSLGKAFMYPIALLSVCGMMLGLGSGLASDDMaklipFLAIPIIKTILDFIVSLGLFAFVNLPVLFAIAIP 81
Cdd:COG1263 4 KKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGL-----LGEGSFLSGTYQILNAAGDAVFYFLPLLFAIGAA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 82 LGLlkdkedKAYGAFSGLIGFMAMHLGTNfylkqhDLLVVADqmsthGQTIILGIQ---SYNTSVLGGIVAGLLVASMYK 158
Cdd:COG1263 79 KGF------GGNPALAAVIGYLLVHPTLL------NAYAVAG-----GYISFLGIPtliGYQGGVFPGILAGWLAAYLEK 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 159 KIvNLRIPESLGFYsgprLVPIITLIVMSGFGL-IIPFIWPPFFN-LFMLIGHWISTSGPVGYFFYAVAERVTIPFGLNH 236
Cdd:COG1263 142 FL-KKKLPDALGFF----FVPILTLLIMVPLALlVIGPIWPPIGNgIAAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHH 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 237 LVTSVFRFtPIGGsavIGGEEYYGTLNMFMAyvkenavipldlagkmeqgklmiqyGLAGAALAMYRTAhaQNRKAIKAL 316
Cdd:COG1263 217 GLNPIFWF-LLGG---TGDDGLFPILAAAMF-------------------------GQPGAALAVYLKA--KPNKKVKGL 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 317 LISGVLTVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGVK---MGFTGdLIQFISFgvLRGTRTGWPIAVc 393
Cdd:COG1263 266 AISAALTAFLTGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKafsFGVGG-LIDFPSI--LNPGATNLLLYL- 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 394 VEVAYFFIYYFVFRWTIlkfnlmtvGREesspvtlnahEDTAIADIPTPDKSELQAAEQMVKALGGKENIKSLDNCVTRL 473
Cdd:COG1263 342 IGLVIAFVYYFVFTFLI--------GRE----------DEEEEEKLATKADAKKEEAEAAAAALGGGGGLLLLEADITVL 403
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 446733298 474 RLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKVIA 514
Cdd:COG1263 404 LLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGG 444
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
14-353 |
8.72e-56 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 189.48 E-value: 8.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 14 GKAFMYPIALLSVCGMMLGLGSglaSDDMAKLIPFLAIPIIKTILDFIVSLGLFAFVNLPVLFAIAIPLGLLKDKedkAY 93
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGN---LPNDTTGLPAGGFTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLAGGD---GV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 94 GAFSGLIGFMAMHL--GTNFYLKQHDLlvvadqmstHGQTIILGIQSYNTSVLGGIVAGLLVASMYKKIVN---LRIPES 168
Cdd:pfam02378 75 AGAAGLIGLLSFNLaaAISVALTAAGL---------SGGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKnitIKLPDS 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 169 LGFYSGPRLVPIIT-LIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGP-VGYFFYAVAERVTIPFGLNHLVTSVFRFTP 246
Cdd:pfam02378 146 LPFFVGKRFVPIITgFVTLLVIGPVLGLIWPAIQGGLNALGLLLIIAGGiLGGLIFGFLERLLWPFGLHGAFIAIFWFLP 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 247 IGGSAVIGGEEYYGtlnmfmayvkenaviplDLAGKMEQGKLMIQYGLAGAALAMYRTAHAQNRKAIKALLISGVLTVII 326
Cdd:pfam02378 226 IGGSNPIANQQAYG-----------------AGAAHILTGGFDVMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPFL 288
|
330 340
....*....|....*....|....*..
gi 446733298 327 GGVSEPIEFLFLFVSPLLFVFHAFMNG 353
Cdd:pfam02378 289 FGITEPLEFGFPFVLNPPFFIPAILAG 315
|
|
| pts-Glc |
TIGR00852 |
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside ... |
65-364 |
3.59e-38 |
|
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIC domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273299 Cd Length: 289 Bit Score: 141.69 E-value: 3.59e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 65 GLFAFVNLPVLFAIAIPLGLlkDKEDKAYGAFSGLIGFMAMHLGTNFYLKQHdllvvadqmsthgqTIILGI---QSYNT 141
Cdd:TIGR00852 1 GSAAFFFLPLLFAIGAAKGF--GGNPYLGAALAGILVHPVLNNAMGVGAQAV--------------GNFFGFeiaKVGYT 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 142 SVLGGIVAGLLVASMYKKIVNLRIPESLGFYSGPRLVPIITLIVMSGFGLIIPFIWPPFfnLFMLIGHWI-STSGPVGYF 220
Cdd:TIGR00852 65 GVVGPIIVGAIALALHERFLDKKLPDVLGFFLGPRFVVIIAGFVAILLIGPLGRVWPPV--GISALLHWLySAGGALGGA 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 221 FYAVAERVTIPFGLNHLVTSVFRFTPIGGSAVIGGEEYYGTLNMFMAYVKenAVIPLDLAGKMEQGK-----LMIQYGLA 295
Cdd:TIGR00852 143 IFGFLYRLLVPTGLHHIFYAIFIQLIAGGTVIGGGQVIPGDALANMAQGG--AALAVFFTAGDAKFKsiglpAAFSAGLG 220
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446733298 296 GAALAMYRTAHAQNRKAIKALLISGVLTVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLPYMGV 364
Cdd:TIGR00852 221 ITEPAMYGVALRERRPFVAGLIGSALLTAFLTGITEPLEFLFLFGAPGLYSIHAVLAGSIFTVAIGMGI 289
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
448-512 |
5.39e-27 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 103.77 E-value: 5.39e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446733298 448 QAAEQMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKV 512
Cdd:cd00212 2 QLAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGV 66
|
|
| PtsG2 |
COG1264 |
Phosphotransferase system IIB components [Carbohydrate transport and metabolism]; |
448-523 |
3.10e-26 |
|
Phosphotransferase system IIB components [Carbohydrate transport and metabolism];
Pssm-ID: 440876 [Multi-domain] Cd Length: 76 Bit Score: 101.73 E-value: 3.10e-26
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446733298 448 QAAEQMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDqNTLQVIIGTKVIALRRDMDNYM 523
Cdd:COG1264 2 ELAKDILEALGGKENIVSVDHCATRLRVTVKDPSKVDEAALKKLGVKGVVKNG-GQVQVIIGPGVDKVADEIEKLL 76
|
|
| EIIB_glc |
TIGR00826 |
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) ... |
411-509 |
9.13e-17 |
|
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIB domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273288 [Multi-domain] Cd Length: 88 Bit Score: 75.47 E-value: 9.13e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 411 LKFNLMTVGREESspvtlnahEDTAIADIPtPDKSELQAAEQMvKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKR 490
Cdd:TIGR00826 1 TRLRLKTPGREKA--------DEEAIAAGE-GVKGVFTAAGQI-QALGGTGNVNKVDACITRLRVGVADVSKVDDAVLKK 70
|
90
....*....|....*....
gi 446733298 491 AGGIAVVKLdQNTLQVIIG 509
Cdd:TIGR00826 71 LGAHGVNPL-QRAVQVISG 88
|
|
| PRK09702 |
PRK09702 |
PTS sugar transporter subunit IIB; |
392-523 |
9.80e-17 |
|
PTS sugar transporter subunit IIB;
Pssm-ID: 77355 [Multi-domain] Cd Length: 161 Bit Score: 77.83 E-value: 9.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446733298 392 VCVEVAYFFIYYFVFRWTILKFNLMTVGREES-----SPVTLNAHEDTAIADIPtpdKSELQAAEQMVKALGGKENIKSL 466
Cdd:PRK09702 13 IAIGLCFTLLYFVVFRTLILQFNMCTPGREDAevklySKAEYKASRGQTTAAEP---KKELDQAAGILQALGGVGNISSI 89
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 446733298 467 DNCVTRLRLTIADMG-LIDEAAIKRAGGIAVVKlDQNTLQVIIGTKVIALRRDMDNYM 523
Cdd:PRK09702 90 NNCATRLRIALHDMSqTLDDEVFKKLGAHGVFR-SGDAIQVIIGLHVSQLREQLDSLI 146
|
|
| PTS_EIIB |
pfam00367 |
phosphotransferase system, EIIB; |
451-482 |
1.53e-12 |
|
phosphotransferase system, EIIB;
Pssm-ID: 459785 [Multi-domain] Cd Length: 32 Bit Score: 61.61 E-value: 1.53e-12
10 20 30
....*....|....*....|....*....|..
gi 446733298 451 EQMVKALGGKENIKSLDNCVTRLRLTIADMGL 482
Cdd:pfam00367 1 KEILEALGGKENIKSVDHCATRLRLTVKDESK 32
|
|
| PTS-II-ABC-beta |
TIGR01995 |
PTS system, beta-glucoside-specific IIABC component; This model represents a family of PTS ... |
448-512 |
2.45e-08 |
|
PTS system, beta-glucoside-specific IIABC component; This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.
Pssm-ID: 273919 [Multi-domain] Cd Length: 610 Bit Score: 56.59 E-value: 2.45e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446733298 448 QAAEQMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKV 512
Cdd:TIGR01995 3 DLAKAIIENVGGKENIESVTHCATRLRFTLKDDAKADTEKLKKISGVITVVKSGGQYQVVIGNDV 67
|
|
| PRK14905 |
PRK14905 |
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; ... |
450-513 |
2.85e-08 |
|
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Pssm-ID: 184898 [Multi-domain] Cd Length: 355 Bit Score: 55.81 E-value: 2.85e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446733298 450 AEQMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKVI 513
Cdd:PRK14905 278 AIQLIDHLGGKDNISALTHCASRIRVMLRNDGHIDKSAIEKIDCVKGLFSIANQYQIILGAGIV 341
|
|
| murP |
PRK09586 |
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed |
452-509 |
2.93e-08 |
|
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
Pssm-ID: 181971 [Multi-domain] Cd Length: 476 Bit Score: 56.22 E-value: 2.93e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 446733298 452 QMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIG 509
Cdd:PRK09586 11 TILTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTIEGVKGVILSDDQVQVVLG 68
|
|
| PRK09796 |
PRK09796 |
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional |
450-512 |
2.28e-07 |
|
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional
Pssm-ID: 182081 Cd Length: 472 Bit Score: 53.26 E-value: 2.28e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446733298 450 AEQMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKV 512
Cdd:PRK09796 9 ARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTV 71
|
|
| PRK11007 |
PRK11007 |
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional |
444-512 |
2.24e-05 |
|
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional
Pssm-ID: 182896 Cd Length: 473 Bit Score: 46.99 E-value: 2.24e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446733298 444 KSELQAAEQMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRaggIAVVK---LDQNTLQVIIGTKV 512
Cdd:PRK11007 4 KINQQDIDRLIELVGGRENIATVSHCITRLRFVLNDPANADPKEIEQ---LPMVKgcfTNAGQFQVVIGTEV 72
|
|
| PRK09824 |
PRK09824 |
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional |
450-512 |
6.02e-05 |
|
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional
Pssm-ID: 236627 [Multi-domain] Cd Length: 627 Bit Score: 45.86 E-value: 6.02e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446733298 450 AEQMVKALGGKENIKSLDNCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKV 512
Cdd:PRK09824 7 AREIVAGVGGADNIVSLMHCATRLRFKLKDNSKAQAEVLKKNPGVIMVVESGGQFQVVIGNHV 69
|
|
| |
