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Conserved domains on  [gi|446721192|ref|WP_000798505|]
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MULTISPECIES: fimbrial biogenesis chaperone StdC [Salmonella]

Protein Classification

PRK15254 family protein( domain architecture ID 11487714)

PRK15254 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 9-247 1.38e-176

fimbrial chaperone protein StdC; Provisional


:

Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 484.66  E-value: 1.38e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   9 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 88
Cdd:PRK15254   1 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  89 VRITQVRGLTDKLPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRN 168
Cdd:PRK15254  81 VRITQVRGLTDKLPQDRETLFWFNVRGVPPKPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRN 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446721192 169 PTPYYITVAWLGADRSHRLSGFSEGVMVPPLGSLPLKAVLPAETRTLWVGYIDDYGGLQMNRYACDALNCAFKDAGATS 247
Cdd:PRK15254 161 PTPYYITVAWLGADRSHRLSGFREGVMVPPLGSLPLKAVLPAETRTLWVGYIDDYGGLQMNRYACDALNCAFKDAGATS 239
 
Name Accession Description Interval E-value
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 9-247 1.38e-176

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 484.66  E-value: 1.38e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   9 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 88
Cdd:PRK15254   1 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  89 VRITQVRGLTDKLPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRN 168
Cdd:PRK15254  81 VRITQVRGLTDKLPQDRETLFWFNVRGVPPKPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRN 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446721192 169 PTPYYITVAWLGADRSHRLSGFSEGVMVPPLGSLPLKAVLPAETRTLWVGYIDDYGGLQMNRYACDALNCAFKDAGATS 247
Cdd:PRK15254 161 PTPYYITVAWLGADRSHRLSGFREGVMVPPLGSLPLKAVLPAETRTLWVGYIDDYGGLQMNRYACDALNCAFKDAGATS 239
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-225 3.65e-66

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 204.84  E-value: 3.65e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   1 MKNSRRSrVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKtTPFLAQSWVTDADGV-----RTDALMAL 75
Cdd:COG3121    1 MKRLLRL-LLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGD-TPYLVQSWVDDWDQDagpdkATAPFVVT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  76 PPLQRIDAGQKSQVRITQvrgLTDKLPQDRETLFWFNVRGVPPKSEDD---NVLQLAMQSQLKLFYRPKAIIRSSSDQPE 152
Cdd:COG3121   79 PPLFRLEPGKSQTVRIIR---TGPPLPQDRESLFRLNVDEIPPKDASEegkNTLQIALRTRIKLFYRPAGLKGSPEDAAE 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446721192 153 rKLTAERNAGHLTLRNPTPYYITVAWLGADRSHRlSGFSEGVMVPPLGS--LPLKA-VLPAETRTLWVGYIDDYGG 225
Cdd:COG3121  156 -KLTWSLVGNGLTVTNPGPYYVTLSDLSLGAGGK-KLKKGLGMVLPGSTrrWPLPAgASLAAGGKVTWATINDYGG 229
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 26-143 1.80e-42

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 140.42  E-value: 1.80e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   26 VNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDADGVRTD-----ALMALPPLQRIDAGQKSQVRITQvrgLTDK 100
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTG-DNPYLVQSWVDDGNEEGTDekakaPFIVTPPLFRLEPGQEQVLRIYT---TGPP 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 446721192  101 LPQDRETLFWFNVRGVPPKS---EDDNVLQLAMQSQLKLFYRPKAI 143
Cdd:pfam00345  77 LPTDRESLFWLNVLEIPPKDkpkGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 9-247 1.38e-176

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 484.66  E-value: 1.38e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   9 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 88
Cdd:PRK15254   1 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  89 VRITQVRGLTDKLPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRN 168
Cdd:PRK15254  81 VRITQVRGLTDKLPQDRETLFWFNVRGVPPKPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRN 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446721192 169 PTPYYITVAWLGADRSHRLSGFSEGVMVPPLGSLPLKAVLPAETRTLWVGYIDDYGGLQMNRYACDALNCAFKDAGATS 247
Cdd:PRK15254 161 PTPYYITVAWLGADRSHRLSGFREGVMVPPLGSLPLKAVLPAETRTLWVGYIDDYGGLQMNRYACDALNCAFKDAGATS 239
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-225 3.65e-66

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 204.84  E-value: 3.65e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   1 MKNSRRSrVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKtTPFLAQSWVTDADGV-----RTDALMAL 75
Cdd:COG3121    1 MKRLLRL-LLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGD-TPYLVQSWVDDWDQDagpdkATAPFVVT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  76 PPLQRIDAGQKSQVRITQvrgLTDKLPQDRETLFWFNVRGVPPKSEDD---NVLQLAMQSQLKLFYRPKAIIRSSSDQPE 152
Cdd:COG3121   79 PPLFRLEPGKSQTVRIIR---TGPPLPQDRESLFRLNVDEIPPKDASEegkNTLQIALRTRIKLFYRPAGLKGSPEDAAE 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446721192 153 rKLTAERNAGHLTLRNPTPYYITVAWLGADRSHRlSGFSEGVMVPPLGS--LPLKA-VLPAETRTLWVGYIDDYGG 225
Cdd:COG3121  156 -KLTWSLVGNGLTVTNPGPYYVTLSDLSLGAGGK-KLKKGLGMVLPGSTrrWPLPAgASLAAGGKVTWATINDYGG 229
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 4-238 6.42e-48

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 159.17  E-value: 6.42e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   4 SRRSRVILLALAAAWSQYSpaAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVR-TDALMALPPLQRID 82
Cdd:PRK15274   8 KRQALIASVLLAAPLVSHS--AIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKdTRYFTALPPLQRIE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  83 AGQKSQVRITQVRGLTDkLPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIRS-SSDQP-ERKLTAERN 160
Cdd:PRK15274  86 PKSDGQVKVQPLPAAAS-LPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQvDKTHPwQTKLTLTYQ 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192 161 AGHLTLRNPTPYYITVAWLGADRSHRLSGFSEGVMVP-----------PLGSLPLkavlpaetrtlwVGYIDDYGGLQMN 229
Cdd:PRK15274 165 GDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPrekvtspikgaSLGSSPV------------VGYVDDYGGHRLL 232


                 ....*....
gi 446721192 230 RYACDALNC 238
Cdd:PRK15274 233 VFTCSGNTC 241
PRK15285 PRK15285
fimbrial chaperone StfD;
1-243 9.00e-44

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 148.00  E-value: 9.00e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   1 MKNSRRSRVILLALAAAWSqySPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVR-TDALMALPPLQ 79
Cdd:PRK15285   4 LKRYNLAAVLLLLLGGYGS--AQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKiTSPLIVVPPVQ 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  80 RIDAGQKSQVRITQVRGLTdKLPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQP-ERKLTAE 158
Cdd:PRK15285  82 RIEPSAIGQVKIQGMPALA-SLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPwQYKITLQ 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192 159 RNAGHLTLRNPTPYYITVawlgADRSHRLSGfsegvmVPPLGSLPLkAVLPAETRTLW-----------VGYIDDYGGLQ 227
Cdd:PRK15285 161 RQGNGYQVSNPTGYYVVL----SNASNRMDG------TPARGFSPL-VIAPKSNVTLGgdaselghspvLTYVNDYGARL 229

                        250
                 ....*....|....*.
gi 446721192 228 MNRYACDALNCAFKDA 243
Cdd:PRK15285 230 PLIFNCTDNSCAVDEA 245
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 26-143 1.80e-42

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 140.42  E-value: 1.80e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   26 VNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDADGVRTD-----ALMALPPLQRIDAGQKSQVRITQvrgLTDK 100
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTG-DNPYLVQSWVDDGNEEGTDekakaPFIVTPPLFRLEPGQEQVLRIYT---TGPP 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 446721192  101 LPQDRETLFWFNVRGVPPKS---EDDNVLQLAMQSQLKLFYRPKAI 143
Cdd:pfam00345  77 LPTDRESLFWLNVLEIPPKDkpkGGQNGLQLALRSRIKLFYRPAGL 122
PRK15208 PRK15208
molecular chaperone LpfB;
5-224 3.86e-39

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 135.42  E-value: 3.86e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   5 RRSRVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAG 84
Cdd:PRK15208   2 RLISFTALALALIAQNSFAGGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTPFIITPPLFKLDPT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  85 QKSQVRITQVrglTDKLPQDRETLFWFNVRGVPPKSEDD---NVLQLAMQSQLKLFYRPKAIIRSSSDQPeRKLTAERNA 161
Cdd:PRK15208  82 KNNVLRIVNI---TNTLPQDRESVYWINVKAIPAKSEDAenkNVLQIAVRTRLKLFYRPAGLKGNSMDAW-NKLRFTRAG 157

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446721192 162 GHLTLRNPTPYYITVAWLGA-DRSHRLSGfsegvMVPPLGSLPLKavLPAETRTL-WVGY--IDDYG 224
Cdd:PRK15208 158 NQIKVENPSAFNLTFNQFYAnGRDIEKAG-----MVPAKGSLNIE--LPAGTGKVsEVKYniINDFG 217
PRK15295 PRK15295
fimbrial assembly chaperone;
19-224 1.30e-37

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 131.61  E-value: 1.30e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  19 SQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPfLAQSW--VTDADGVRTDALMALPPLQRIDAGQKSQVRItqVRG 96
Cdd:PRK15295  14 SHVAHASIVVGGTRLVFDGNNDESSINVENKDSKAN-LVQSWlsVVDPQVTNKQAFIITPPLFRLDAGQKNSIRV--IRS 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  97 lTDKLPQDRETLFWFNVRGVPPKSE--DDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRNPTPYYI 174
Cdd:PRK15295  91 -GAPLPADRESMYWLNIKGIPSIDDnaSANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTPYYM 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446721192 175 TVAWLGADrSHRLSGfseGVMVPPLGSL--PLKAVLPAETRTLWvGYIDDYG 224
Cdd:PRK15295 170 NFASVTLN-SHEVKS---ATFVPPKSSAsfKLGSTAAPHGTVTW-RLISDYG 216
PRK09926 PRK09926
fimbrial chaperone;
1-226 4.37e-36

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 127.91  E-value: 4.37e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   1 MKNSRRSRVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDAD-----GVRTDALMAL 75
Cdd:PRK09926   2 FFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKG-NNPLLVQSWLDTGDdnaepGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  76 PPLQRIDAGQKSQVRITQVRglTDKLPQDRETLFWFNVRGVPPK-----SEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQ 150
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTA--STALPKDRESVFWFNVLEVPPKpdaekVANQSLLQLAFRTRIKLFYRPDGLKGNPSEA 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192 151 PER---KLTAERNAGHLTLRNPTPYYIT---VAWLGADRSHRLsgfsEGVMVPPLG--SLPLKAvLPAETRTLWVGY--I 220
Cdd:PRK09926 159 PLAlkwSWAGSEGKASLRVTNPTPYYVSfssGDLEAGGKRYPV----DSKMIAPFSdeSMKVKG-LSGKASSGKVHFyaI 233


                 ....*.
gi 446721192 221 DDYGGL 226
Cdd:PRK09926 234 NDFGGA 239
PRK15211 PRK15211
fimbrial chaperone;
3-227 2.57e-35

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 125.71  E-value: 2.57e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   3 NSRRSRVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTpFLAQSWVTDADGVRTDALMA-LPPLQRI 81
Cdd:PRK15211   1 NKMMKWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQT-YGGQVWIDNTTQGSSTVYMVpAPPFFKV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  82 DAGQKSQVRITQVrglTDKLPQDRETLFWFNVRGVPPKSEDD--NVLQLAMQSQLKLFYRPKAIIRSSSDqPERKLTAER 159
Cdd:PRK15211  80 RPKEKQIIRIMKT---DSALPKDRESLFWLNVQEIPPKPKASegNVLAVALNTQVKLIYRPKALKEGREN-AEKNLQIIH 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446721192 160 NAGHLTLRNPTPYYITVawLGADRSHRLSGFSEGVM-----VPPLGSLPLKAVLPAETRTlwVGYIDDYGGLQ 227
Cdd:PRK15211 156 RGGETYLKNPTPYYFAV--TGVKLNGQPVKLSDRVMneiaqLAPFSEVSLGKLSLNGTVT--VQAVNDWGGTQ 224
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 24-225 1.93e-32

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 117.96  E-value: 1.93e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  24 AAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDAD--GVRTDA-LMALPPLQRIDAGQKSQVRITQVrglTDK 100
Cdd:PRK15299  22 AGINIGTTRVIFHGDAKDASISISNSD-NVPYLIQSWAQSISetGASGDApFMVTPPLFRLNGGQKNVLRIIRT---GGN 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192 101 LPQDRETLFWFNVRGVPPKSEDD--NVLQLAMQSQLKLFYRPKAIIRSSSDQPERkLTAERNAGHLTLRNPTPYYITVAw 178
Cdd:PRK15299  98 LPEDRESLYWLDIKSIPSSNPDNkhNTLMLAVKAEFKLIYRPKALTQKPEEVADR-LTWSRQGRTLTVKNPTPYYMNFA- 175

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446721192 179 lgadrshRLSGFSEGVMVP----PLGSLPLKAVLPAETRTLWvGYIDDYGG 225
Cdd:PRK15299 176 -------TLSVGSQKVKAPryvaPFGNAQYTLPAAASGPIAW-SIINDFGG 218
PRK15195 PRK15195
molecular chaperone FimC;
9-226 1.02e-28

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 108.41  E-value: 1.02e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   9 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 88
Cdd:PRK15195  10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENT 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  89 VRITQVrglTDKLPQDRETLFWFNVRGVPP----KSEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNAGHL 164
Cdd:PRK15195  90 LRIIYA---GPPLAADRESLFWMNVKAIPSvdknALEGRNVLQLAILSRIKLFVRPINLQELPEEAPD-TLKFSRSGNHL 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446721192 165 TLRNPTPYYITVAWL--GADRshrlsgfSEGVMVPPLGSlpLKAVLPAETR-TLWVGYIDDYGGL 226
Cdd:PRK15195 166 KVHNPSPYYVTLVNLqvGSQK-------LGNAMIAPKVN--SQIPLPSGVQgKLKFQTVNDYGAV 221
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 10-225 1.39e-26

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 102.92  E-value: 1.39e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  10 ILLALAAAWSQYSPAA--VNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKS 87
Cdd:PRK15188  11 LLLLLSAAGLSFAAQAggIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKEN 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  88 QVRITQVrglTDKLPQDRETLFWFNVRGVPPKSEDD---NVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNAGHL 164
Cdd:PRK15188  91 ILRIMYV---GPSLPTDRESVFYLNSKAIPSVDKNKltgNSLQIATQSVIKLFIRPKNLAEAPAHAPS-TLRCRNERGQL 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446721192 165 TLRNPTPYYITVAWLgadrsHRLSGFSEGVMVPPLGSLplkaVLPAETRTLWVGYIDDYGG 225
Cdd:PRK15188 167 TITNPSPYYVSMVEL-----YSAGKKLPNTMVPPKGAI----TLPATPGQVSLRTVNDFGA 218
lfpB PRK15290
fimbrial chaperone;
8-226 1.51e-25

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 100.45  E-value: 1.51e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   8 RVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVT--DADGVRTDALMALPPLQRIDAGQ 85
Cdd:PRK15290  21 TAIILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDpfNKEDKSKAPFTVIPPVSRLEPSQ 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  86 KSQVRITQVRGLTdkLPQDRETLFWFNVRGVPP--KSEDDNVLQLAMQSQLKLFYRPkAIIRSSSDQPERKLTAERNAGH 163
Cdd:PRK15290 101 EKVLRIIHTKGVS--LPDDRESVFWLNIKNIPPsaSNKATNSLEIAVKTRIKLFWRP-ASIRLIPEDAAPKVKWRREGRN 177

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446721192 164 LTLRNPTPYYITVAWLGADRShrlsgfsegvmvpplgSLPLKAVLPAETRTL------------WvGYIDDYGGL 226
Cdd:PRK15290 178 LIAENPNPIHISVMDVIVDGH----------------DVPLNMIRPFETLTLplpansaggqmtW-RFINDYGAV 235
PRK15249 PRK15249
fimbrial chaperone;
2-224 2.10e-25

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 100.26  E-value: 2.10e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   2 KNSRRSRV---ILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDAD---GVRTDALM-- 73
Cdd:PRK15249   3 MDTRHSALyylIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNND-AIPYIVQTWFDDGDmntSPENSSAMpf 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  74 -ALPPLQRIDAGQKSQVRItqVRGLTDKLPQDRETLFWFNVRGVPP----KSEDDNVLQLAMQSQLKLFYRPKAIIRSSS 148
Cdd:PRK15249  82 iATPPVFRIQPKAGQVVRV--IYNNTKKLPQDRESVFWFNVLQVPPtnigSDSGQNKMLVMLRSRIKLFYRPDGLGKPDN 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192 149 DQPERKLTAERNAGH---LTLRNPTPYYITVAWLGADRSHRlSGFSEGVMVPPLGS----LPLKAVLPAETRTLWVGYID 221
Cdd:PRK15249 160 LAKKLQIKTVNKGSGksgIVIVNPQPWFASLSNLNVKVNGA-SYNLDADMIAPFSSqtwwLPGKRSLKSFSGTVTVTLVN 238


                 ...
gi 446721192 222 DYG 224
Cdd:PRK15249 239 DQG 241
PRK15218 PRK15218
fimbrial assembly chaperone;
5-224 2.32e-25

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 99.67  E-value: 2.32e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   5 RRSRVILLALAA--AWSqyspaAVNVDRTRIIMDAPQKTVAITLNNDDKTTPfLAQSWVTDAD------GVRTDALMAlP 76
Cdd:PRK15218   2 KWMIALCLACAAmpAWS-----GIYIYGTRIIYPAQKKDITVQLMNDGKRSS-LIQAWIDNGDtslppeKLQVPFIMT-P 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  77 PLQRIDAGQKSQVRITQvrgLTDKLPQDRETLFWFNVRGVPPKS---EDDNVLQLAMQSQLKLFYRPKAIirSSSDQPE- 152
Cdd:PRK15218  75 PVIRVAANSGQQLKIKK---LANNLPGDRESLFYLNVLDIPPNSdenKDKNIIKFALQNRIKLIYRPPGV--QKVDKATf 149

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446721192 153 RKLTAERNAGHLTLRNPTPYYITVAWLGAdrSHRLSgfSEGVMVPPLGSLPLKAVLPAETRTlwVGYIDDYG 224
Cdd:PRK15218 150 SRLQLLRAPGSISVKNNSANWITIPEIKA--KSKVN--KETLLLAPWSSQSITTTVVVNSYT--VTLIDDSG 215
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 24-224 3.83e-24

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 96.66  E-value: 3.83e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  24 AAVNVDRTRIIMDAPQKTVAITLNNDDKTTPfLAQSWVTDADGVRTD-----ALMALPPLQRIDAGQKSQVRITQvrgLT 98
Cdd:PRK15253  33 AGIVIYGTRVIYPAEKKEVVVQLVNQGEQAS-LVQSWIDDGNTSLPPekiqvPFMLTPPVARVAAESGQQIKIKK---MP 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  99 DKLPQDRETLFWFNVRGVPPKSEDD---NVLQLAMQSQLKLFYRPKAIIRSSSDQPERkLTAERNAGHLTLRNPTPYYIT 175
Cdd:PRK15253 109 NSLPDNKESLFYLNVLDIPPNSQENagkNVLKFAMQNRIKLIWRPSRIAAVTKDSFQR-IGLFRSNKTVIMKNDTANWIT 187

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 446721192 176 VAWLGADRShRLSgfSEGVMVPPLGSLPLKaVLPAETRTLWVGYIDDYG 224
Cdd:PRK15253 188 VTDVKAGNT-KIN--DQTIMLPPLSTQNIN-MKYASTSQYEVTIIDDNG 232
PRK15246 PRK15246
fimbrial assembly chaperone;
16-224 9.36e-23

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 92.72  E-value: 9.36e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  16 AAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWvTDA-------DGVRTdALMALPPLQRIDAGQKSQ 88
Cdd:PRK15246   2 TGWYGPAQAAVNIDRTRIIFASDDVAQSLTLSNDN-TTPMLLQVW-TDAgnidaspDNSKT-PLVALPPVFKMQPGELRT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  89 VRITqvrgLTDK--LPQDRETLFWFNVRGVPPKSED-DNV---LQLAMQSQLKLFYRPKAiIRSSSDQPERKLTAERNAG 162
Cdd:PRK15246  79 LRLL----LSSRqqLATDRESLFWLNIYQIPPVTQDiKNHprkLVLPLRLRLKILIRPTG-LKAPTEAEEKKLRFIAKEN 153

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446721192 163 HLTLRNPTPYYITVAwLGADRSHRLSgfseGVMVPPLGSL--PLKAvLPAETRTLWVGYIDDYG 224
Cdd:PRK15246 154 TIRIVNPTSWYMSLT-LTMDNKKSIG----DIMVAPKTALdvPLTR-SPTPGASINYAVINDSG 211
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 1-215 2.95e-19

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 83.17  E-value: 2.95e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   1 MKNSRRSRVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDADGVRTDALMALPPLQR 80
Cdd:PRK09918   1 NRFNLFFLFTALVLLSSSSAVHAAGMVPETSVVIVEESDGEGSINVKNTD-SNPILLYTTLVDLPEDKSKLLLVTPPVAR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  81 IDAGQKSQVRITqvrgLTDKLPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIRssSDQPERKLTAERN 160
Cdd:PRK09918  80 VEPGQSQQVRFI----LKSGSPLNTEHLLRVSFEGVPPKPGGKNKVVMPIRQDLPVLIQPAALPV--VRDPWKLLVWSIS 153

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446721192 161 AGHLTLRNPTPYYItvawlgadrshRLsgfSEGVMVPP---LGSLPLKAVLPAETRTL 215
Cdd:PRK09918 154 GNNLVVSNPSPYVV-----------RL---GQQVILLPsgkVVALPKPYILPGESLTV 197
PRK15224 PRK15224
pili assembly chaperone PapD;
25-177 3.75e-19

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 83.25  E-value: 3.75e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  25 AVNVDRTRIIMDAPQKTVAITLNNDdKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQVRITQVRGltdKLPQD 104
Cdd:PRK15224  29 SVKLGATRVIYHAGTAGATLSVSNP-QNYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGG---DMPTD 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192 105 RETLFWFNVRGVPPKSEDDNV--------LQLAMQSQLKLFYRPKAiIRSSSDQPERKLTAERNAGHLTLRNPTPYYITV 176
Cdd:PRK15224 105 RETLQWVCIKAVPPENEPSDTqakgatldLNLSINVCDKLIFRPDA-VKGTPEDVAGNLRWVETGNKLKVENPTPFYMNL 183


                 .
gi 446721192 177 A 177
Cdd:PRK15224 184 A 184
PRK11385 PRK11385
fimbrial chaperone;
4-230 4.56e-16

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 74.79  E-value: 4.56e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192   4 SRRSRVILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQS------WVTDADGVRTDALMALPP 77
Cdd:PRK11385   6 NRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKinrptrWAGGEASTVPAPLLAAPP 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  78 LQRIDAGQKSQVRItqVRGLTDKLPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAiIRSSSDQPERKLTA 157
Cdd:PRK11385  86 LILLKPGTTGTLRL--LRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEG-LPGDPLEAYQQLRW 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446721192 158 ERNAGHLTLRNPTPYYITVAWLGADRshrlSGFSEGVMVPPLGSLPL---KAVLPAETRtlWVGyIDDYGGLQMNR 230
Cdd:PRK11385 163 TRNSQGVQLTNPTPYYINLIQVSVNG----KALSNAGVVPPKSQRQTswcQAIAPCHVA--WRA-INDYGGLSAKK 231
PRK15233 PRK15233
fimbrial chaperone SefB;
31-177 3.46e-15

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 72.45  E-value: 3.46e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  31 TRIIM--DAPQKTVAITlnnDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQVRITQVRGLTDKlpqDRETL 108
Cdd:PRK15233  47 TRVIYkeDAPSTSFWIM---NEKEYPILVQTQVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNK---NEESL 120

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446721192 109 FWFNVRGVPPKSEDD-----NV-----LQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNAGHLTLRNPTPYYITVA 177
Cdd:PRK15233 121 YWLCVKGVPPLNDNEsnnknNIttnlnVNVVTNSCIKLIYRPKTIDLTTMEIAD-KLKLERKGNSIVIKNPTSSYVNIA 198
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
14-197 1.05e-14

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 70.89  E-value: 1.05e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  14 LAAAWSQyspAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFL------AQSWVTDADGVRTDALMALPPLQRIDAGQKS 87
Cdd:PRK15192  15 LPISWAQ---AGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIdthilpGGRWPGTKNEGNITPFVVTPPLFMLSARQEN 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446721192  88 QVRITQVRGltdKLPQDRETLFWFNVRGVPPKSEDDNVLQLAMQSQLKLFYRPKAIIrSSSDQPERKLTAERNAGHLTLR 167
Cdd:PRK15192  92 SMRVVYTGA---PLPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLA-GNPQQAYRHLIWSLTPDGATVR 167

                        170       180       190
                 ....*....|....*....|....*....|
gi 446721192 168 NPTPYYITVAWLgadRSHRLSGFSEGVMVP 197
Cdd:PRK15192 168 NPTPYYVTLFLL---RANERAQDNAGVVAP 194
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 166-227 3.04e-11

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 57.27  E-value: 3.04e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446721192  166 LRNPTPYYITVAWLGADRSHRLSGFsEGVMVPPLGSLPL-KAVLPAETRTLWVGYIDDYGGLQ 227
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELAL-DPGMVAPFSSQTFaGLPAPAAGGTVSYTYINDYGGIV 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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