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Conserved domains on  [gi|446704146|ref|WP_000781492|]
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MULTISPECIES: fimbrial biogenesis chaperone StbB [Salmonella]

Protein Classification

PRK15249 family protein( domain architecture ID 11487712)

PRK15249 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15249 PRK15249
fimbrial chaperone;
1-253 5.43e-173

fimbrial chaperone;


:

Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 476.60  E-value: 5.43e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   1 MKMDTRHSALYYLIVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAMP 80
Cdd:PRK15249   1 MKMDTRHSALYYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  81 FIATPPVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNL 160
Cdd:PRK15249  81 FIATPPVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 161 AKKLQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSFSGTVTVTLVNDL 240
Cdd:PRK15249 161 AKKLQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSFSGTVTVTLVNDQ 240

                        250
                 ....*....|...
gi 446704146 241 GARISESYDVPHH 253
Cdd:PRK15249 241 GARISESYDVPHH 253
 
Name Accession Description Interval E-value
PRK15249 PRK15249
fimbrial chaperone;
1-253 5.43e-173

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 476.60  E-value: 5.43e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   1 MKMDTRHSALYYLIVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAMP 80
Cdd:PRK15249   1 MKMDTRHSALYYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  81 FIATPPVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNL 160
Cdd:PRK15249  81 FIATPPVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 161 AKKLQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSFSGTVTVTLVNDL 240
Cdd:PRK15249 161 AKKLQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSFSGTVTVTLVNDQ 240

                        250
                 ....*....|...
gi 446704146 241 GARISESYDVPHH 253
Cdd:PRK15249 241 GARISESYDVPHH 253
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-250 2.79e-80

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 241.05  E-value: 2.79e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   8 SALYYLIVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAmPFIATPPV 87
Cdd:COG3121    3 RLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATA-PFVVTPPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  88 FRIQPKAGQVVRVIYNNtKKLPQDRESVFWFNVLQVPPTNiGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQI 166
Cdd:COG3121   82 FRLEPGKSQTVRIIRTG-PPLPQDRESLFRLNVDEIPPKD-ASEEGKNTLQIALRTRIKLFYRPAGLkGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 167 KTVNKgsgksGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSfSGTVTVTLVNDLGARISE 246
Cdd:COG3121  160 SLVGN-----GLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAA-GGKVTWATINDYGGAVPL 233


                 ....
gi 446704146 247 SYDV 250
Cdd:COG3121  234 EATL 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 30-155 4.69e-55

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 172.77  E-value: 4.69e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   30 VTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAmPFIATPPVFRIQPKAGQVVRvIYNNTKKLP 109
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKA-PFIVTPPLFRLEPGQEQVLR-IYTTGPPLP 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 446704146  110 QDRESVFWFNVLQVPPTNIGSDsGQNKMLVMLRSRIKLFYRPDGLG 155
Cdd:pfam00345  79 TDRESLFWLNVLEIPPKDKPKG-GQNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK15249 PRK15249
fimbrial chaperone;
1-253 5.43e-173

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 476.60  E-value: 5.43e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   1 MKMDTRHSALYYLIVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAMP 80
Cdd:PRK15249   1 MKMDTRHSALYYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  81 FIATPPVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNL 160
Cdd:PRK15249  81 FIATPPVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 161 AKKLQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSFSGTVTVTLVNDL 240
Cdd:PRK15249 161 AKKLQIKTVNKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSFSGTVTVTLVNDQ 240

                        250
                 ....*....|...
gi 446704146 241 GARISESYDVPHH 253
Cdd:PRK15249 241 GARISESYDVPHH 253
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-250 2.79e-80

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 241.05  E-value: 2.79e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   8 SALYYLIVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAmPFIATPPV 87
Cdd:COG3121    3 RLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATA-PFVVTPPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  88 FRIQPKAGQVVRVIYNNtKKLPQDRESVFWFNVLQVPPTNiGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQI 166
Cdd:COG3121   82 FRLEPGKSQTVRIIRTG-PPLPQDRESLFRLNVDEIPPKD-ASEEGKNTLQIALRTRIKLFYRPAGLkGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 167 KTVNKgsgksGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSfSGTVTVTLVNDLGARISE 246
Cdd:COG3121  160 SLVGN-----GLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAA-GGKVTWATINDYGGAVPL 233


                 ....
gi 446704146 247 SYDV 250
Cdd:COG3121  234 EATL 237
PRK09926 PRK09926
fimbrial chaperone;
14-244 2.57e-72

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 221.13  E-value: 2.57e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  14 IVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPEnSSAMPFIATPPVFRIQPK 93
Cdd:PRK09926  11 LCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPG-SIKVPFTATPPVSRIDPK 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  94 AGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNiGSDSGQNKMLVML--RSRIKLFYRPDGL-GKPDNLAKKLQIKtVN 170
Cdd:PRK09926  90 RGQTIKLMYTASTALPKDRESVFWFNVLEVPPKP-DAEKVANQSLLQLafRTRIKLFYRPDGLkGNPSEAPLALKWS-WA 167

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446704146 171 KGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSlKSFSGTVTVTLVNDLGARI 244
Cdd:PRK09926 168 GSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSG-KASSGKVHFYAINDFGGAI 240
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 30-155 4.69e-55

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 172.77  E-value: 4.69e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   30 VTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAmPFIATPPVFRIQPKAGQVVRvIYNNTKKLP 109
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKA-PFIVTPPLFRLEPGQEQVLR-IYTTGPPLP 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 446704146  110 QDRESVFWFNVLQVPPTNIGSDsGQNKMLVMLRSRIKLFYRPDGLG 155
Cdd:pfam00345  79 TDRESLFWLNVLEIPPKDKPKG-GQNGLQLALRSRIKLFYRPAGLA 123
PRK15246 PRK15246
fimbrial assembly chaperone;
25-241 8.08e-39

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 135.09  E-value: 8.08e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  25 ASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAmPFIATPPVFRIQPKAGQVVRVIYNN 104
Cdd:PRK15246   7 PAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKT-PLVALPPVFKMQPGELRTLRLLLSS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 105 TKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGKP-DNLAKKLQIKTVNKgsgksGIVIVNP 183
Cdd:PRK15246  86 RQQLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPtEAEEKKLRFIAKEN-----TIRIVNP 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446704146 184 QPWFASLsNLNVkVNGASynLDADMIAPFSSQTwwLPGKRSLKSFSgTVTVTLVNDLG 241
Cdd:PRK15246 161 TSWYMSL-TLTM-DNKKS--IGDIMVAPKTALD--VPLTRSPTPGA-SINYAVINDSG 211
PRK15218 PRK15218
fimbrial assembly chaperone;
14-247 1.81e-38

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 133.95  E-value: 1.81e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  14 IVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSaMPFIATPPVFRIQPK 93
Cdd:PRK15218   4 MIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQ-VPFIMTPPVIRVAAN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  94 AGQVVRvIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDsGQNKMLVMLRSRIKLFYRPDGLGKPD-NLAKKLQIKtvnkg 172
Cdd:PRK15218  83 SGQQLK-IKKLANNLPGDRESLFYLNVLDIPPNSDENK-DKNIIKFALQNRIKLIYRPPGVQKVDkATFSRLQLL----- 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446704146 173 SGKSGIVIVNPQPWFASLSNLNV--KVNGASYnldadMIAPFSSQTWwlpgkrSLKSFSGTVTVTLVNDLGARISES 247
Cdd:PRK15218 156 RAPGSISVKNNSANWITIPEIKAksKVNKETL-----LLAPWSSQSI------TTTVVVNSYTVTLIDDSGNYLNET 221
lfpB PRK15290
fimbrial chaperone;
10-242 5.27e-33

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 120.10  E-value: 5.27e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  10 LYYLIVFLLLALPATASWASVTILGSRIIYPSTA--SSVDVQLKNNDaIPYIVQTWFDDgdmnTSPENSSAMPFIATPPV 87
Cdd:PRK15290  19 LFTAIILSVFLGQPALTYAGVVIGGTRVVYLSNNpdKSISVFSKEEK-IPYLIQAWVDP----FNKEDKSKAPFTVIPPV 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  88 FRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTniGSDSGQNKMLVMLRSRIKLFYRPDGLGK-PDNLAKKlqI 166
Cdd:PRK15290  94 SRLEPSQEKVLRIIHTKGVSLPDDRESVFWLNIKNIPPS--ASNKATNSLEIAVKTRIKLFWRPASIRLiPEDAAPK--V 169

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446704146 167 KTVNKGsgkSGIVIVNPQPwfASLSNLNVKVNGasYNLDADMIAPFSSQTWWLPGkrslKSFSGTVTVTLVNDLGA 242
Cdd:PRK15290 170 KWRREG---RNLIAENPNP--IHISVMDVIVDG--HDVPLNMIRPFETLTLPLPA----NSAGGQMTWRFINDYGA 234
PRK15211 PRK15211
fimbrial chaperone;
12-243 2.30e-32

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 118.00  E-value: 2.30e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  12 YLIVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDdgdmNTSpENSSAMPFIATPPVFRIQ 91
Cdd:PRK15211   6 WGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWID----NTT-QGSSTVYMVPAPPFFKVR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  92 PKAGQVVRVIYNNTKkLPQDRESVFWFNVLQVPPtnIGSDSGQNKMLVMLRSRIKLFYRPDGLG-KPDNLAKKLQIKTVN 170
Cdd:PRK15211  81 PKEKQIIRIMKTDSA-LPKDRESLFWLNVQEIPP--KPKASEGNVLAVALNTQVKLIYRPKALKeGRENAEKNLQIIHRG 157

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446704146 171 KGSgksgiVIVNPQPWFASLsnLNVKVNGASYNLDAD------MIAPFSSQTWwlpGKRSLKsfsGTVTVTLVNDLGAR 243
Cdd:PRK15211 158 GET-----YLKNPTPYYFAV--TGVKLNGQPVKLSDRvmneiaQLAPFSEVSL---GKLSLN---GTVTVQAVNDWGGT 223
PRK15195 PRK15195
molecular chaperone FimC;
13-242 1.78e-30

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 113.03  E-value: 1.78e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  13 LIVFLLLALPATASWASVTILG-SRIIYPSTASSVDVQLKNNDAIP-YIVQTWFddgdmntspENSSAM---PFIATPPV 87
Cdd:PRK15195   9 MIIIFYLIISASVHAAGGIALGaTRVIYPADAKQTSLAIRNSHTNErYLVNSWI---------ENSSGVkekSFIVTPPL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  88 FRIQPKAGQVVRVIYNNtKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLGK-PDNLAKKLQI 166
Cdd:PRK15195  80 FVSEPKSENTLRIIYAG-PPLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQElPEEAPDTLKF 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446704146 167 KTVNkgsgkSGIVIVNPQPWFASLSNLNVkvngASYNLDADMIAPFSSQTWWLPGkrslkSFSGTVTVTLVNDLGA 242
Cdd:PRK15195 159 SRSG-----NHLKVHNPSPYYVTLVNLQV----GSQKLGNAMIAPKVNSQIPLPS-----GVQGKLKFQTVNDYGA 220
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 25-251 7.24e-30

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 111.41  E-value: 7.24e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  25 ASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWfddGDMNTSPENSSAMPFIATPPVFRIQPKAGQVVRVIYNN 104
Cdd:PRK15299  19 AHAAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSW---AQSISETGASGDAPFMVTPPLFRLNGGQKNVLRIIRTG 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 105 TkKLPQDRESVFWFNVLQVPPTNigSDSGQNKMLVMLRSRIKLFYRPDGLG-KPDNLAKKLQIKTvnkgSGKSgIVIVNP 183
Cdd:PRK15299  96 G-NLPEDRESLYWLDIKSIPSSN--PDNKHNTLMLAVKAEFKLIYRPKALTqKPEEVADRLTWSR----QGRT-LTVKNP 167

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446704146 184 QPWFASLSNLNV---KVNGASYnldadmIAPFSSQTWWLPGkrslkSFSGTVTVTLVNDLGARISESYDVP 251
Cdd:PRK15299 168 TPYYMNFATLSVgsqKVKAPRY------VAPFGNAQYTLPA-----AASGPIAWSIINDFGGTGPEHKQTP 227
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 14-250 2.88e-29

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 110.53  E-value: 2.88e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  14 IVFLLLALPATASwasVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSaMPFIATPPVFRIQPK 93
Cdd:PRK15253  22 VLLSAIILPAHAG---IVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQ-VPFMLTPPVARVAAE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  94 AGQVVRvIYNNTKKLPQDRESVFWFNVLQVPPTNiGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNLA-KKLQIKTVNKg 172
Cdd:PRK15253  98 SGQQIK-IKKMPNSLPDNKESLFYLNVLDIPPNS-QENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSfQRIGLFRSNK- 174

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446704146 173 sgksGIVIVNPQPWFASLSnlNVKVNGASYNLDADMIAPFSSQtwwlpgKRSLKSFSGT-VTVTLVNDLGARISESYDV 250
Cdd:PRK15253 175 ----TVIMKNDTANWITVT--DVKAGNTKINDQTIMLPPLSTQ------NINMKYASTSqYEVTIIDDNGNYISSKINV 241
PRK15295 PRK15295
fimbrial assembly chaperone;
12-246 7.44e-29

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 108.88  E-value: 7.44e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  12 YLIVFLLLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDmntsPENSSAMPFIATPPVFRIq 91
Cdd:PRK15295   3 IKKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVD----PQVTNKQAFIITPPLFRL- 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  92 pKAGQ--VVRVIyNNTKKLPQDRESVFWFNVLQVPPTNIGSDsgQNKMLVMLRSRIKLFYRPDGLGK--PDNLAKKLQIk 167
Cdd:PRK15295  78 -DAGQknSIRVI-RSGAPLPADRESMYWLNIKGIPSIDDNAS--ANRVEISINTQIKLIYRPPALTKstPDSQSQQLKW- 152

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446704146 168 tvnkGSGKSGIVIVNPQPWFASLSnlNVKVNGASYNlDADMIAPFSSQTWWLpgkRSLKSFSGTVTVTLVNDLGARISE 246
Cdd:PRK15295 153 ----QTAGDVITVNNPTPYYMNFA--SVTLNSHEVK-SATFVPPKSSASFKL---GSTAAPHGTVTWRLISDYGMSLEP 221
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 5-242 1.26e-27

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 106.40  E-value: 1.26e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   5 TRHSALYYLIVFLLLALPaTASWASVTILGSRIIYPSTASSVDVQLKNNDA-IPYIVQTWFDDGDMNTSPENssampFIA 83
Cdd:PRK15274   4 TNHFKRQALIASVLLAAP-LVSHSAIVPDRTRVIFNGNENSITVTLKNGNAtLPYLAQAWLEDDKFAKDTRY-----FTA 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  84 TPPVFRIQPKA-GQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTnigSDSgQNKMLVMLRSRIKLFYRPDGLGKPDNLAK 162
Cdd:PRK15274  78 LPPLQRIEPKSdGQVKVQPLPAAASLPQDRESLFYFNVREIPPK---SDK-PNTLQLALQTRIKFFYRPVAVARQVDKTH 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 163 KLQIKTVNKGSGkSGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGkrslKSFSGTVTVTLVNDLGA 242
Cdd:PRK15274 154 PWQTKLTLTYQG-DGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKG----ASLGSSPVVGYVDDYGG 228
PRK15285 PRK15285
fimbrial chaperone StfD;
11-244 2.19e-27

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 105.63  E-value: 2.19e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  11 YYLIVFLLLALPATAS-WASVTILGSRIIYPSTASSVDVQLKN-NDAIPYIVQTWFDD--GDMNTSPenssampFIATPP 86
Cdd:PRK15285   7 YNLAAVLLLLLGGYGSaQAAIAPDRTRLVFRGEDKSISVDLKNaNSKLPYLAQSWVEDekGVKITSP-------LIVVPP 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  87 VFRIQPKA-GQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTnigSDSgQNKMLVMLRSRIKLFYRPDGLGKPDnLAKKLQ 165
Cdd:PRK15285  80 VQRIEPSAiGQVKIQGMPALASLPQDRETLFYYNVREIPPQ---SDK-PNTLQIALQTRIKVFYRPQALSKID-MQHPWQ 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 166 IKTVNKGSGkSGIVIVNPQPWFASLSNLNVKVNGA-SYNLDADMIAPFSSQTwwLPGKRSlkSFSGTVTVTLVNDLGARI 244
Cdd:PRK15285 155 YKITLQRQG-NGYQVSNPTGYYVVLSNASNRMDGTpARGFSPLVIAPKSNVT--LGGDAS--ELGHSPVLTYVNDYGARL 229
PRK15208 PRK15208
molecular chaperone LpfB;
17-183 1.53e-24

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 97.67  E-value: 1.53e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  17 LLLALPATASWAS-VTILGSRIIYPST--ASSVDVQLKNNDAiPYIVQTWFDDGDmntspeNSSAMPFIATPPVFRIQPK 93
Cdd:PRK15208   9 LALALIAQNSFAGgVALSSTRVIYDGSkkEASLTVNNKSKTE-EFLIQSWIDDAN------GNKKTPFIITPPLFKLDPT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  94 AGQVVRVIyNNTKKLPQDRESVFWFNVLQVPPTNIGSDsGQNKMLVMLRSRIKLFYRPDGLgKPDNLAKKLQIKTVNKGs 173
Cdd:PRK15208  82 KNNVLRIV-NITNTLPQDRESVYWINVKAIPAKSEDAE-NKNVLQIAVRTRLKLFYRPAGL-KGNSMDAWNKLRFTRAG- 157

                        170
                 ....*....|
gi 446704146 174 gkSGIVIVNP 183
Cdd:PRK15208 158 --NQIKVENP 165
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 17-242 1.02e-21

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 90.22  E-value: 1.02e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  17 LLLALPATASW---ASVTILGSRIIYPSTASSVDVQLKNND-AIPYIVQTWFDDGDmntspeNSSAMPFIATPPVFRIQP 92
Cdd:PRK15254   2 ILLALAAAWSQyspAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDAD------GVRTDALMALPPLQRIDA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  93 KAGQVVRV--IYNNTKKLPQDRESVFWFNVLQVPPTNigsdSGQNKMLVMLRSRIKLFYRPDGL--GKPDNLAKKLqikT 168
Cdd:PRK15254  76 GQKSQVRItqVRGLTDKLPQDRETLFWFNVRGVPPKP----EDDNVLQLAMQSQLKLFYRPKAIirSSSDQPERKL---T 148

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446704146 169 VNKGSGKsgIVIVNPQPWFASLSNLNV----KVNGASynlDADMIAPFSSqtwwLPGKRSLKSFSGTVTVTLVNDLGA 242
Cdd:PRK15254 149 AERNAGH--LTLRNPTPYYITVAWLGAdrshRLSGFR---EGVMVPPLGS----LPLKAVLPAETRTLWVGYIDDYGG 217
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 12-242 2.39e-21

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 89.05  E-value: 2.39e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  12 YLIVFLLLA---LPATASWASVTILGSRIIYPSTASSVDVQLKNN-DAIPYIVQTWFDDGDmntspeNSSAMPFIATPPV 87
Cdd:PRK15188   8 FLRLLLLLSaagLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSsASNVFLIQSWVANAD------GSRSTDFIITPPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  88 FRIQPKAGQVVRVIYNNtKKLPQDRESVFWFNVLQVPPTNIGSDSGqNKMLVMLRSRIKLFYRPDGLGKPDNLAKklqiK 167
Cdd:PRK15188  82 FVIQPKKENILRIMYVG-PSLPTDRESVFYLNSKAIPSVDKNKLTG-NSLQIATQSVIKLFIRPKNLAEAPAHAP----S 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446704146 168 TVNKGSGKSGIVIVNPQPWFASLsnlnVKVNGASYNLDADMIAPfssqtwwlPGKRSLKSFSGTVTVTLVNDLGA 242
Cdd:PRK15188 156 TLRCRNERGQLTITNPSPYYVSM----VELYSAGKKLPNTMVPP--------KGAITLPATPGQVSLRTVNDFGA 218
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
7-218 5.48e-21

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 88.22  E-value: 5.48e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146   7 HSALYYLIvflllaLPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENS-SAMPFIATP 85
Cdd:PRK15192   7 RCAIYWCL------LPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRWPGTKNEgNITPFVVTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  86 PVFRIQPKAGQVVRVIYNNtKKLPQDRESVFWFNVLQVPptniGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKL 164
Cdd:PRK15192  81 PLFMLSARQENSMRVVYTG-APLPADRESLFTLSIAAIP----SGKPEANRVQMAFRSALKLLYRPEGLaGNPQQAYRHL 155

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446704146 165 QIKTVNKGSgksgiVIVNPQPWFASLSNLnvKVNGASYNlDADMIAPFSS-QTWW 218
Cdd:PRK15192 156 IWSLTPDGA-----TVRNPTPYYVTLFLL--RANERAQD-NAGVVAPFATrQTDW 202
PRK15224 PRK15224
pili assembly chaperone PapD;
29-242 5.52e-18

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 80.17  E-value: 5.52e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  29 SVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNtspensSAMPFIATPPVFRIQPKAGQVVRVIyNNTKKL 108
Cdd:PRK15224  29 SVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKS------SPAPFLVMPPLFRLEANQQSQLRIV-RTGGDM 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 109 PQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRI----KLFYRPDGL-GKPDNLAKKLQ-IKTVNKgsgksgIVIVN 182
Cdd:PRK15224 102 PTDRETLQWVCIKAVPPENEPSDTQAKGATLDLNLSInvcdKLIFRPDAVkGTPEDVAGNLRwVETGNK------LKVEN 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446704146 183 PQPWFASLSNLNV---KVNGASYnldadmIAPFSSQTWWLPGkrslkSFSGTVTVTLVNDLGA 242
Cdd:PRK15224 176 PTPFYMNLASVTVggkPITGLEY------IPPFADKTLNMPG-----SAHGDIEWRVITDFGG 227
PRK15233 PRK15233
fimbrial chaperone SefB;
35-248 9.43e-18

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 79.77  E-value: 9.43e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  35 SRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDmntspeNSSAMPFIATPPVFRIQPKAGQVVRVIyNNTKKLPQDRES 114
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDD------KSSKAPFIVTPPILKVESNARTRLKVI-PTSNLFNKNEES 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146 115 VFWFNVLQVPPTNIGSDSGQNKML------VMLRSRIKLFYRPDGLGKPD-NLAKKLQIKtvNKGsgkSGIVIVNPQPWF 187
Cdd:PRK15233 120 LYWLCVKGVPPLNDNESNNKNNITtnlnvnVVTNSCIKLIYRPKTIDLTTmEIADKLKLE--RKG---NSIVIKNPTSSY 194

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446704146 188 ASLSnlNVKVNGASYNLDADMIAPFSSQTwwLPGKRSLKsfsgtVTVTLVNDLGARISESY 248
Cdd:PRK15233 195 VNIA--NIKSGNLSFNIPNGYIEPFGYAQ--LPGGVHSK-----ITLTILDDNGAEIIRDY 246
PRK11385 PRK11385
fimbrial chaperone;
13-218 1.06e-16

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 76.71  E-value: 1.06e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  13 LIVFLLLAL-PATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQ------TWFDDGDMNTSPEnssamPFIATP 85
Cdd:PRK11385  10 LLIFAVLSLlVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINskinrpTRWAGGEASTVPA-----PLLAAP 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446704146  86 PVFRIQPKAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSgqnkMLVMLRSRIKLFYRPDGL-GKPDNLAKKL 164
Cdd:PRK11385  85 PLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQS----VKVAMRSVFKLFWRPEGLpGDPLEAYQQL 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446704146 165 QIKtvnkgSGKSGIVIVNPQPWFASLsnLNVKVNGASYNlDADMIAPFSS-QTWW 218
Cdd:PRK11385 161 RWT-----RNSQGVQLTNPTPYYINL--IQVSVNGKALS-NAGVVPPKSQrQTSW 207
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 180-245 1.35e-14

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 66.52  E-value: 1.35e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446704146  180 IVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWwlpGKRSLKSFSGTVTVTLVNDLGARIS 245
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTF---AGLPAPAAGGTVSYTYINDYGGIVP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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