|
Name |
Accession |
Description |
Interval |
E-value |
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
27-588 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 864.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 27 SQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPF 106
Cdd:TIGR01816 2 AKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMPF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 107 SRLDDGRIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNqDGAVVGCTALCI 185
Cdd:TIGR01816 82 SRTEDGKIYQRPFGGHTRDFGkGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLME-DGECRGVIAYCL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 186 ETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLL 265
Cdd:TIGR01816 161 ETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 266 NKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKE 345
Cdd:TIGR01816 241 NANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGV-GPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKD 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 346 PIPVIPTCHYMMGGIPTKVTGQALTvNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAE 425
Cdd:TIGR01816 320 PIPVLPTVHYNMGGIPTNYHGQVLR-DGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKP 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 426 QGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSE 505
Cdd:TIGR01816 399 GSDVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKV 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 506 FNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPE----SESMTRRSVNMEPKLRPAF 581
Cdd:TIGR01816 479 WNTDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDENWLKHTLSYVDintgKVLLSYKPVIFKPLTVADF 558
|
....*..
gi 446698194 582 PPKIRTY 588
Cdd:TIGR01816 559 EPKKRVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
24-588 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 797.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGN-THEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM 102
Cdd:TIGR01812 16 VEAAKAGLNTAVISKVYPTRSHTVAAQGGMAAALGNvDPDDSWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHW 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 103 GLPFSRLDDGRIYQRPFGGQSKN---FGGEQAartaaaadrtGHALLHTLYQQNLKNHTTIFSEWYALDLVkNQDGAVVG 179
Cdd:TIGR01812 96 GVPFSRTPDGRIAQRPFGGHSKDrtcYAADKT----------GHALLHTLYEQCLKLGVSFFNEYFALDLI-HDDGRVRG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 180 CTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRG 259
Cdd:TIGR01812 165 VVAYDLKTGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 260 EGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAH 339
Cdd:TIGR01812 245 EGGYLVNKNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGSPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAG 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 340 VDPVKEPIPVIPTCHYMMGGIPTKVTGQALTvnekgeDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHL 419
Cdd:TIGR01812 325 VDPVKEPIPVRPTAHYSMGGIPTDYTGRVIC------ETIVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 420 QESIAEQG-ALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNAR 498
Cdd:TIGR01812 399 AEYAAKTGnPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVR 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 499 LDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTR---RSVNMEP 575
Cdd:TIGR01812 479 INDKSKVFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLKHTLAYYDNPGTPRleyKPVTITK 558
|
570
....*....|...
gi 446698194 576 klrpaFPPKIRTY 588
Cdd:TIGR01812 559 -----YEPAERKY 566
|
|
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
7-588 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 754.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86
Cdd:PTZ00139 29 TYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDAIQ 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 87 YMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY 165
Cdd:PTZ00139 109 YMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGkGGQAYRCAAAADRTGHAMLHTLYGQSLKYDCNFFIEYF 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 166 ALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTG 245
Cdd:PTZ00139 189 ALDLIMDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLPLQDLEFVQFHPTG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 246 IAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAKLKLDHLGKEVLES 325
Cdd:PTZ00139 269 IYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGC-GPNKDHIYLDLTHLPPETLHE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 326 RLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSL 405
Cdd:PTZ00139 348 RLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGDDDKIVPGLLAAGEAACASVHGANRLGANSL 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 406 LDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDrLNRWNNNRNGEDPVA-IRKALQECMQHNFSVFREGDAMAKGL 484
Cdd:PTZ00139 428 LDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIA-RLDKIRHNKGDISTAqIRKRMQRTMQKHAAVFRIGESLQEGV 506
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 485 EQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL-YLPES 563
Cdd:PTZ00139 507 EKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDFPERDDKNWMKHTLsYIRDV 586
|
570 580 590
....*....|....*....|....*....|.
gi 446698194 564 E----SMTRRSVNMEP--KLRPAFPPKIRTY 588
Cdd:PTZ00139 587 KkgkvRLTYRPVITTPldNEMETVPPAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
7-588 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 678.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86
Cdd:PLN00128 50 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 87 YMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY 165
Cdd:PLN00128 130 YMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGkGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYF 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 166 ALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTG 245
Cdd:PLN00128 210 ALDLIMDSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 246 IAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAKLKLDHLGKEVLES 325
Cdd:PLN00128 290 IYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGV-GPEKDHIYLHLNHLPPEVLKE 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 326 RLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSL 405
Cdd:PLN00128 369 RLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSL 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 406 LDLVVFGRAAGLHLQEsIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVA-IRKALQECMQHNFSVFREGDAMAKGL 484
Cdd:PLN00128 449 LDIVVFGRACANRVAE-IAKPGEKQKPLPKDAGEKTIAWLDKLRNANGSLPTSkIRLNMQRVMQNNAAVFRTQETLEEGC 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 485 EQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL-YLPES 563
Cdd:PLN00128 528 KLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLgYWEEG 607
|
570 580
....*....|....*....|....*...
gi 446698194 564 E-SMTRRSVNMEP--KLRPAFPPKIRTY 588
Cdd:PLN00128 608 KvRLDYRPVHMNTldDEVETFPPKARVY 635
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
34-559 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 589.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 34 ALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGR 113
Cdd:PRK06069 35 AVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPWSRRPDGR 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 114 IYQRPFGGQSKN---FGGEQAartaaaadrtGHALLHTLYQQNLKNHTT-IFSEWYALDLVKnQDGAVVGCTALCIETGE 189
Cdd:PRK06069 115 ISQRPFGGMSFPrttFAADKT----------GFYIMHTLYSRALRFDNIhFYDEHFVTSLIV-ENGVFKGVTAIDLKRGE 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 190 VVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHG 269
Cdd:PRK06069 184 FKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLINKEG 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 270 ERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWG-PHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIP 348
Cdd:PRK06069 264 ERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGlCYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVTEPIP 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 349 VIPTCHYMMGGIPTKVTGQALTVNEKGedvvVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGA 428
Cdd:PRK06069 344 VRPAAHYTMGGIHTDVYGRVLTADGEW----VRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRIAGEQAAEYALKRPA 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 429 LRDASESDVEASLDRL-NRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFN 507
Cdd:PRK06069 420 PSSPVEKLAEKEEKRIfDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIEDKSRIYN 499
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 446698194 508 TQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLY 559
Cdd:PRK06069 500 TDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDENWLKHTLA 551
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
34-588 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 528.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 34 ALLSKVFPTRSHTVSAQGGITVALGNTH-EDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDG 112
Cdd:PRK05945 32 AVVAKTHPIRSHSVAAQGGIAASLKNVDpEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRLPDG 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 113 RIYQRPFGGQSKNfggeqaaRTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKnQDGAVVGCTALCIETGEVVY 192
Cdd:PRK05945 112 RIAQRAFGGHSHN-------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLIL-EDNQAKGVVMYHIADGRLEV 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 193 FKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERF 272
Cdd:PRK05945 184 VRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEGDRF 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 273 MERYAPNAKDLAGRDVVARSIMIEIREGRGC--DG-PWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPV 349
Cdd:PRK05945 264 MADYAPSRMELAPRDITSRAITLEIRAGRGInpDGsAGGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEPMPV 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 350 IPTCHYMMGGIPTKVTGQALtvneKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQE-------- 421
Cdd:PRK05945 344 RPTVHYCMGGIPVNTDGRVR----RSADGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAEyvqgrklp 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 422 SIAEQGALRDAsESDVEASLDRLNRWNNNrngedpvAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDD 501
Cdd:PRK05945 420 EVDEQRYLKEA-KQRIQALLDQSGTYRIN-------QLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDD 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 502 TSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL--YLPESESMTRRSVNMEpklrp 579
Cdd:PRK05945 492 KGKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDDQNFLKHTLayYSPAGIDIQYMPVVIT----- 566
|
....*....
gi 446698194 580 AFPPKIRTY 588
Cdd:PRK05945 567 MFEPQERKY 575
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
34-568 |
6.66e-172 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 500.32 E-value: 6.66e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 34 ALLSKVFPTRSHTVSAQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGR 113
Cdd:PRK09231 33 ALISKVYPMRSHTVAAEGGSAAVAQD--HDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKPDGS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 114 IYQRPFGGQSKN---FGGEQAartaaaadrtGHALLHTLYQQNLKnHTTI--FSEWYALDLVKNqDGAVVGCTALCIETG 188
Cdd:PRK09231 111 VNVRRFGGMKIErtwFAADKT----------GFHMLHTLFQTSLK-YPQIqrFDEHFVLDILVD-DGHVRGLVAMNMMEG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 189 EVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKH 268
Cdd:PRK09231 179 TLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKD 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 269 GERFMERYA---------PNAK--DLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTF 337
Cdd:PRK09231 259 GYRYLQDYGlgpetplgePKNKymELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAY 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 338 AHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAltvnekgedvVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAG- 416
Cdd:PRK09231 339 VGVDPVKEPIPVRPTAHYTMGGIETDQNCET----------RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGe 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 417 ---LHLQESIAEQGALRDASESDVEASLDrlnRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRER 493
Cdd:PRK09231 409 qaaERAATAGPGNEAALDAQAADVEQRLK---ALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKER 485
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446698194 494 LKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFD--FPDRDDENWLCHSLYLPESESMTR 568
Cdd:PRK09231 486 FKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTERDDVNFLKHTLAFYNADGTPR 562
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
7-588 |
9.85e-163 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 476.30 E-value: 9.85e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVAL-GNTH-EDNWEWHMYDTVKGSDYIGDQDA 84
Cdd:PRK06452 5 EYDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDpNDNPDYMTYDTVKGGDYLVDQDA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 85 IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQS---KNFGGEQAartaaaadrtGHALLHTLYQQNLKNHTTIF 161
Cdd:PRK06452 85 AELLSNKSGEIVMLLERWGALFNRQPDGRVAVRYFGGQTyprTRFVGDKT----------GMALLHTLFERTSGLNVDFY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 162 SEWYALDLVKNqDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQF 241
Cdd:PRK06452 155 NEWFSLDLVTD-NKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 242 HPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWgphAKLKLDHLGKE 321
Cdd:PRK06452 234 HPTALYPSDVLISEAARGEGGILKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGFPGGY---VGLDLTHLGEE 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 322 VLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQaltvnekgeDVVVPGLFAVGEIACVSVHGANRLG 401
Cdd:PRK06452 311 YIKERLALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGGIDVDIDGR---------NPDIVGLFSAGEAACVSVHGANRLG 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 402 GNSLLDLVVFGRAAGLHLQESIAEQGALRDAS-ESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAM 480
Cdd:PRK06452 382 SNSLLDTLVFGQVTGRTVVQFLKSNPGNPTSNyEKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGL 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 481 AKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL-Y 559
Cdd:PRK06452 462 LNAMSEINKLRGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDDNNWLKHTIaY 541
|
570 580 590
....*....|....*....|....*....|
gi 446698194 560 LP-ESESMTRRSVNMEpklrpAFPPKIRTY 588
Cdd:PRK06452 542 LRgNTVEVTFKPVKIT-----RWKPEPRVY 566
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
24-558 |
9.51e-158 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 461.88 E-value: 9.51e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 24 LQISQSGQTcALLSKVFPTRSHTVSAQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMG 103
Cdd:COG0029 21 LKLAERGRV-TLLTKGELGESNTRWAQGGIAAVLDP--GDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 104 LPFSRLDDGRIYQRPFGGQSKN----FGGeqaartaaaadRTGHALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVV 178
Cdd:COG0029 98 VPFDRDEDGELALTREGGHSRRrilhAGD-----------ATGREIERALLEAVRAHpNITVLENHFAVDLITDADGRCV 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 179 GCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGV---LVTE 255
Cdd:COG0029 167 GAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 256 GCRGEGGYLLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIREGrGCDGPWgphaklkLD--HLGKEVLESRLPGILEL 333
Cdd:COG0029 247 AVRGEGAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKT-GGDCVY-------LDisHLDAEFIRERFPTIYAR 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 334 SRTFaHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAltvnekgeDvvVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGR 413
Cdd:COG0029 318 CLEL-GIDITKEPIPVAPAAHYTMGGVATDLDGRT--------S--IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGR 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 414 AAGLHLQESIAEQGALRDASESDVEASldrlnrwnNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRER 493
Cdd:COG0029 387 RAAEDIAARLAESPLPPEIPEWDESVT--------DPDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREE 458
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446698194 494 LKNARLDDTSsefntqrVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDEnWLCHSL 558
Cdd:COG0029 459 IEEYANFRVS-------RDLLELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPA-WRRHTV 515
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
28-588 |
2.96e-141 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 424.39 E-value: 2.96e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 28 QSGQTCALLSKVFPTRSHTVSAQGGITVALGNT---HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGL 104
Cdd:PRK08626 26 QRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAvkgEGDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 105 PFSRLDDGR-----------IYQRPFGG---QSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLV 170
Cdd:PRK08626 106 PWTRVTAGPrtvvingekvtITEKEEAHgliNARDFGGTKKWRTCYTADGTGHTMLYAVDNEAIKLGVPVHDRKEAIALI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 171 kNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGV-PVQDMEMWQFHPTGIAGA 249
Cdd:PRK08626 186 -HDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFHPTAIVPS 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 250 GVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPG 329
Cdd:PRK08626 265 GILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVKSPYGPHLWLDIRILGRKHIETNLRE 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 330 ILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNekgedvvvpGLFAVGEIACVSVHGANRLGGNSLLDLV 409
Cdd:PRK08626 345 VQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESYGLK---------GLFSAGEAACWDMHGFNRLGGNSLAETV 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 410 VfgraAGLHLQESIAE--QGALRDASESDVEASLDRLNRW----NNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKG 483
Cdd:PRK08626 416 V----AGMIVGKYVADfcLGNELEIDTALVEKFVKKQQDRidelIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPELEKA 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 484 LEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL-YLPE 562
Cdd:PRK08626 492 VKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRNDRDWLNRTLaSWPE 571
|
570 580
....*....|....*....|....*...
gi 446698194 563 SESMtRRSVNMEP--KLRPAFPPKIRTY 588
Cdd:PRK08626 572 GEAL-EPTLEYEPldVMKMELPPGFRGY 598
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
24-425 |
2.77e-136 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 403.83 E-value: 2.77e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVAlGNTH-----EDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILE 98
Cdd:COG1053 20 LEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAA-GTNVqkaagEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDW 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 99 LEHMGLPFSRLDDGRIYQrpfggqsknFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNqDGAVV 178
Cdd:COG1053 99 LEAQGVPFSRTPDGRLPQ---------FGGHSVGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVD-DGRVV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 179 GCTALCiETGEVVYFKARATVLATGGAGRIYQS------------TTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGI 246
Cdd:COG1053 169 GVVARD-RTGEIVRIRAKAVVLATGGFGRNYEMraeylpeaegalSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 247 AGAGVLVTEGCRG-EGGYLLNKHGERFMERYAPnakdlagRDVVARSIMIEIREGRG--CD--GPWGPHAKLKLDHLGK- 320
Cdd:COG1053 248 PGDGGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPAYlvLDlrHRRRLEEYLEAGYLVKa 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 321 EVLEsRLPGIL-----ELSRTF--------AHVDP-------VKE----PIPVIPTCHYMMGGIPTKVTGQALTVNEKge 376
Cdd:COG1053 321 DTIE-ELAAKLgidaaELAATVarynaaakAGVDPrgtclgpIKEgpfyAIPVRPGVHYTMGGLRVDADARVLDADGT-- 397
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 446698194 377 dvVVPGLFAVGEiACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAE 425
Cdd:COG1053 398 --PIPGLYAAGE-AAGSVHGANRLGGNSLGDALVFGRIAGRHAAEYAKA 443
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
30-551 |
8.92e-135 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 403.59 E-value: 8.92e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 30 GQTCALLSKVFPTRSH-TVSAQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSR 108
Cdd:PRK06263 29 GKNVVIVSKGLFGKSGcTVMAEGGYNAVLNP--EDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDR 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 109 LDDGRIYQRPFGGQSKN---FGGEQAartaaaadrtGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCI 185
Cdd:PRK06263 107 TEDGEIAQRPFGGQSFNrtcYAGDRT----------GHEMMMGLMEYLIKERIKILEEVMAIKLIVDENREVIGAIFLDL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 186 ETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGI----AGAGVLVTEGCRGEG 261
Cdd:PRK06263 177 RNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEG 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 262 GYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDgpwgpHAKLKLD--HLGKEVLESRLPGILELSRTFAh 339
Cdd:PRK06263 257 GILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEGRGTN-----HGGVYLDvtHLPDEVIEEKLETMLEQFLDVG- 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 340 VDPVKEPIPVIPTCHYMMGGIPtkvtgqaltVNEKGEdVVVPGLFAVGEIACvSVHGANRLGGNSLLDLVVFGRAAGLHL 419
Cdd:PRK06263 331 VDIRKEPMEVAPTAHHFMGGIR---------INEDCE-TNIPGLFACGEVAG-GVHGANRLGGNALADTQVFGAIAGKSA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 420 QE--SIAEQGALRDASESDVEaslDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNA 497
Cdd:PRK06263 400 AKnaENNEFKKVNRSVEEDIA---RIKSEIKFLNGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDL 476
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 446698194 498 RLDDTsSEFNtqrvECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDE 551
Cdd:PRK06263 477 KVNGI-VDFN----KALELENMILVAELVIKSALLRKESRGAHYREDYPETNDE 525
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
5-583 |
2.90e-120 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 369.36 E-value: 2.90e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTH-EDNWEWHMYDTVKGSDYIGDQD 83
Cdd:PRK07803 6 RHSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVNpKDNWQVHFRDTMRGGKFLNNWR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 84 AIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRpfggqskNFGGEQAARTAAAADRTGHALLHTLYQ------QNLKNH 157
Cdd:PRK07803 86 MAELHAKEAPDRVWELETYGALFDRTKDGRISQR-------NFGGHTYPRLAHVGDRTGLELIRTLQQkivslqQEDHAE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 158 T-------TIFSEWYALDLVKnQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAG 230
Cdd:PRK07803 159 LgdyeariKVFAECTITELLK-DGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 231 VPVQDMEMWQFHPTGI----AGAGVLVTEGCRGEGGYLLNKHGERFMERYAP----------------------NAK--- 281
Cdd:PRK07803 238 ATLINMEFVQFHPTGMvwppSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPdvfkgqyaeteeeadrwykdndNNRrpp 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 282 DLAGRDVVARSIMIEIREGRGcdgpwGPHAKLKLD---HLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMG 358
Cdd:PRK07803 318 ELLPRDEVARAINSEVKAGRG-----SPHGGVYLDiasRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMG 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 359 GIptKV---TGQAltvnekgedvVVPGLFAVGEIACvSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASES 435
Cdd:PRK07803 393 GV--EVdpdTGAA----------TVPGLFAAGECAG-GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPAVSEE 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 436 DVEASLDRLNRWNNNRNG-EDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTsSEFNTQRVECL 514
Cdd:PRK07803 460 AVDAAAREALAPFERPAGaENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVEGH-RQYNPGWHLAL 538
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446698194 515 ELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDE----NWLChslylpeSESMTRRSVNMEPKLRPAFPP 583
Cdd:PRK07803 539 DLRNMLLVSECVARAALERTESRGGHTRDDHPGMDPEwrriNLVC-------RADPVGGHVTVTRQPQPPMRP 604
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
24-405 |
3.66e-119 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 358.52 E-value: 3.66e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTH--EDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEH 101
Cdd:pfam00890 16 LAAAEAGLKVAVVEKGQPFGGATAWSSGGIDALGNPPQggIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEA 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 102 MGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNqDGAVVGCT 181
Cdd:pfam00890 96 LGVPFSRTEDGHLDLRPLGGLSATWRTPHDAADRRRGLGTGHALLARLLEGLRKAGVDFQPRTAADDLIVE-DGRVTGAV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 182 ALCIETGEVVYFKAR-ATVLATGGAGR---------IYQSTTNAHINTGDGVGMAIRAGVPVQD--MEMWQFHPTGIAG- 248
Cdd:pfam00890 175 VENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSLVGi 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 249 ---AGVLVtEGCRGEGGYLLNKHGERFMeryapnaKDLAGRDVVARSIM-IEIREGRgcdgpwGPHAKLKLDH-LGKEVL 323
Cdd:pfam00890 255 rlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGR------GANVYLDASGsLDAEGL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 324 ESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALtvneKGEDVVVPGLFAVGEIACVSVHGANRLGGN 403
Cdd:pfam00890 321 EATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVL----DADGQPIPGLYAAGEVACGGVHGANRLGGN 396
|
..
gi 446698194 404 SL 405
Cdd:pfam00890 397 SL 398
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
4-550 |
1.21e-106 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 332.83 E-value: 1.21e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 4 PVREFDAVVIGAGGAGMRAALQISQSGqTCALLSKVFPTRSHTVSAQGGITVALgnTHEDNWEWHMYDTVKGSDYIGDQD 83
Cdd:PLN02815 26 STKYFDFLVIGSGIAGLRYALEVAEYG-TVAIITKDEPHESNTNYAQGGVSAVL--DPSDSVESHMRDTIVAGAFLCDEE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 84 AIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKN--------FGGEqaartaaaadrTGHALLhtlyqQNLK 155
Cdd:PLN02815 103 TVRVVCTEGPERVKELIAMGASFDHGEDGNLHLAREGGHSHHrivhaadmTGRE-----------IERALL-----EAVK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 156 NH--TTIFSEWYALDLVKNQDGAVVGC---TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAG 230
Cdd:PLN02815 167 NDpnITFFEHHFAIDLLTSQDGGSIVChgaDVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQ 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 231 VPVQDMEMWQFHPTGIAGAGV------------LVTEGCRGEGGYLLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIR 298
Cdd:PLN02815 247 AVVSNMEFVQFHPTALADEGLpikpakarenafLITEAVRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLK 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 299 EGRgcdgpwGPHAKLKLDHLGKEVLESRLPGI----LELSrtfahVDPVKEPIPVIPTCHYMMGGIPTKVTGQaltvnek 374
Cdd:PLN02815 326 KRN------EKYVLLDISHKPREEILSHFPNIaaecLKRG-----LDITKQPIPVVPAAHYMCGGVRTGLQGE------- 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 375 gedVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAglhLQESIAE-QGALRDASESD--VEASLDRLNRWNNNR 451
Cdd:PLN02815 388 ---TNVQGLYAAGEVACTGLHGANRLASNSLLEALVFARRA---VQPSIDHmARALRDVSAAAawARPVAPTALADSVMD 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 452 N-GEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKnARLDDTSSEFNTQRVECLELDNLMETAYATAVSA 530
Cdd:PLN02815 462 EiLEWTAVVRKELQRIMWNYVGIVRSTERLETAERKLEELEAEWE-AILFRHGWKPTMVGLEACEMRNLFCVAKLVVSSA 540
|
570 580
....*....|....*....|
gi 446698194 531 NFRTESRGAHSRFDFPDRDD 550
Cdd:PLN02815 541 LARKESRGLHYTTDYPELVE 560
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
24-554 |
1.71e-96 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 306.51 E-value: 1.71e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEW-HMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM 102
Cdd:PRK08641 20 IKAAEAGVHVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLDRM 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 103 GLPFSRLDDGRIYQRPFGGQSKN---FGGeqaartaaaaDRTGHALLHTLYQQ----NLKNHTTIFSEWYALDLVKNQDG 175
Cdd:PRK08641 100 GVMFNRTPEGLLDFRRFGGTLHHrtaFAG----------ATTGQQLLYALDEQvrryEVAGLVTKYEGWEFLGAVLDDEG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 176 AVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGV--LV 253
Cdd:PRK08641 170 VCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLM 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 254 TEGCRGEGGYL-LNKHGER--FMERYAPNAKDLAGRDVVARSI-MIEIREGRGCDGPwgPHAKLKLDHLGKEVLESRLPG 329
Cdd:PRK08641 250 SESARGEGGRVwTYKDGKPwyFLEEKYPAYGNLVPRDIATREIfDVCVEQKLGINGE--NMVYLDLSHKDPKELDIKLGG 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 330 ILELSRTFAHVDPVKEPIPVIPTCHYMMGGIptKVTGQALTvNekgedvvVPGLFAVGEiaC-VSVHGANRLGGNSLLDL 408
Cdd:PRK08641 328 ILEIYEKFTGDDPRKVPMKIFPAVHYSMGGL--WVDYDQMT-N-------IPGLFAAGE--CdYSYHGANRLGANSLLSA 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 409 VVFGRAAGLHLQESIAEQG-ALRDASESDVEASL----DRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKG 483
Cdd:PRK08641 396 IYGGMVAGPNAVEYIKGLGkSADDVSSSVFEQALkqeqEKFDNILSMDGTENAYVLHKELGEWMTDNVTVVRENDKLLET 475
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446698194 484 LEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWL 554
Cdd:PRK08641 476 DEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERNDENWL 546
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
7-546 |
4.62e-94 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 297.10 E-value: 4.62e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 7 EFDAVVIGAGGAGMRAALQISQSGQTcALLSKVFPTRSHTVSAQGGITVALGNTheDNWEWHMYDTVKGSDYIGDQDAIE 86
Cdd:TIGR00551 2 EMDVVVIGSGAAGLSAALALAEKGRV-SVITKASVTDSNSYYAQGGIAAALAET--DSIDAHVEDTLAAGAGICDEEAVW 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 87 YMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNfggeqaaRTAAAADRTGHALLHTLYQQ-NLKNHTTIFSEWY 165
Cdd:TIGR00551 79 FVVSDGSEAVQFLVSHGVTFDRNEQGGVALTREGGHSYP-------RIFHAGDATGREIIPTLEKHaRSEPNVNIIEGEF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 166 ALDLVKNqDGAVVGCTALCIETGEVvyFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTG 245
Cdd:TIGR00551 152 ALDLLIE-TGRCAGVFVQGSGTLET--LHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 246 IAGAGV---LVTEGCRGEGGYLLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIREGRGcdgpwgphAKLKLDHLGKEV 322
Cdd:TIGR00551 229 LIKPRVryfLITEAVRGEGAKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEGGG--------DCVFLDASGIEN 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 323 LESRLPGILELSRTfAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAltvnekgedvVVPGLFAVGEIACVSVHGANRLGG 402
Cdd:TIGR00551 300 FKDRFPTIYAVCRG-AGIDPEREPIPVAPGAHYTMGGISVDAFGRT----------TIPGLYAIGETACTGLHGANRLAS 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 403 NSLLDLVVFGRAAGLHLqesIAEQGALRDASESDVEASldrlNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAK 482
Cdd:TIGR00551 369 NSLLECLVFGLRAARTI---SREPPYASREYQSGVWDE----PRSENPLDRHELQHKMSSLRSVLWNHAGIVRLEWSLRE 441
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446698194 483 GLEQLKVIRErlknarlddtssefntQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFP 546
Cdd:TIGR00551 442 ALRKLVEIQD----------------EVDERMELSNLKLVAKLVTISALKREESRGAHYRLDYP 489
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
34-558 |
4.74e-94 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 298.88 E-value: 4.74e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 34 ALLSKVFPTRSHTVSAQGGITVALgnTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDG- 112
Cdd:PRK07395 35 GLITKDTLKTSASDWAQGGIAAAI--APDDSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAIASLVEMGVAFDRHGQHl 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 113 -----RIYQRPfggqsknfggeqaaRTAAAADRTGHALLHTLYQQNL-KNHTTIFSEWYALDLvkNQDGAVVGCTALCI- 185
Cdd:PRK07395 113 altleAAHSRP--------------RVLHAADTTGRAIVTTLTEQVLqRPNIEIISQALALSL--WLEPETGRCQGISLl 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 186 ETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGV---LVTEGCRGEGG 262
Cdd:PRK07395 177 YQGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPGAprfLISEAVRGEGA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 263 YLLNKHGERFMERYAPnAKDLAGRDVVARSIMIEIREgRGCDgPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAhVDP 342
Cdd:PRK07395 257 HLVDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQK-TATD-PATAHVWLDLRPIPAERIRRRFPNIIRVCQKWG-IDV 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 343 VKEPIPVIPTCHYMMGGIPTKVTGQaltvnekgedVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRaaglhlqeS 422
Cdd:PRK07395 333 FQEPIPVAPAAHYWMGGVVTDLNNQ----------TSIPGLYAVGETASTGVHGANRLASNSLLECLVFAA--------Q 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 423 IAEQGALRDASESDVEASLDRLNRWNNNRNGEDPV-AIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLD- 500
Cdd:PRK07395 395 LAQLELPIEPPASPDLPPISFIIDASQWKNEQEQIqRIRQELPELVWQSAGICREADTLERAIAQVEQWQQQLAALPLSq 474
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 501 -------DTSSEFNTQRVE-----CLELDNLMETAYATAVSANFRTESRGAHSRFDFPDrDDENWLCHSL 558
Cdd:PRK07395 475 flanlppGQTVSFNGPDAEqqlrlWAETRNLLDIAYLILKSALFRTESRGGHYRLDYPQ-TDPAWQVHTL 543
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
9-556 |
4.14e-92 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 293.42 E-value: 4.14e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYM 88
Cdd:PRK07804 18 DVVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAVRSL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 89 CKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKN----FGGEQAARTAAaadrtgHALLHTLYQQNLknhTTIFSEw 164
Cdd:PRK07804 96 VAEGPRAVRELVALGARFDESPDGRWALTREGGHSRRrivhAGGDATGAEVQ------RALDAAVRADPL---DIREHA- 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 165 YALDLVKNQDGAVVGCTALCIETGE-----VVYfkARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMW 239
Cdd:PRK07804 166 LALDLLTDGTGAVAGVTLHVLGEGSpdgvgAVH--APAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFV 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 240 QFHPTG-IAGAGV-----LVTEGCRGEGGYLLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIREgRGCDGPWgphakl 313
Cdd:PRK07804 244 QFHPTVlFLGPAAggqrpLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TGDDHVY------ 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 314 kLDHLGKEVLESRLPGILELSRTfAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAltvnekgedvVVPGLFAVGEIACVS 393
Cdd:PRK07804 316 -LDARGIEGFARRFPTITASCRA-AGIDPVRQPIPVAPAAHYSCGGVVTDVYGRT----------SVPGLYAAGEVACTG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 394 VHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLdrlnrwnnnrngeDPVAIRKALQECMQHNFSV 473
Cdd:PRK07804 384 VHGANRLASNSLLEGLVVGERAGAAAAAHAAAAGRPRATPAVGPEPGL-------------LPALDRAELQRAMTRGAGV 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 474 FREGDAMAKGLEQLkvirerlknARLDDTSSEfntQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDEnW 553
Cdd:PRK07804 451 LRSAAGLARAADRL---------AAGAPARVV---PGRADWEDTNLTLVARALVAAALARTESRGCHWREDFPDTDDE-W 517
|
...
gi 446698194 554 LCH 556
Cdd:PRK07804 518 ARS 520
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
42-553 |
2.76e-87 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 279.95 E-value: 2.76e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 42 TRSHTVSAQGGITVALgnTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGG 121
Cdd:PRK08071 37 RNSNSHLAQGGIAAAV--ATYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGPLHLGKEGA 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 122 QSKN----FGGEQAartaaaadrtGHALLHTLYQQnLKNHTTIFSEWYALDLVKnQDGAVVGCTALcIETGEVVYFKARA 197
Cdd:PRK08071 115 HRKRrilhAGGDAT----------GKNLLEHLLQE-LVPHVTVVEQEMVIDLII-ENGRCIGVLTK-DSEGKLKRYYADY 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 198 TVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGV---LVTEGCRGEGGYLLNKHGERFME 274
Cdd:PRK08071 182 VVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGRcvgLVSEAVRGEGAVLINEDGRRFMM 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 275 RYAPnAKDLAGRDVVARSIMIEIREGRgcdgpwgphaKLKLDHLGKEVLESRLPGILELSRTfAHVDPVKEPIPVIPTCH 354
Cdd:PRK08071 262 GIHP-LADLAPRDVVARAIHEELLSGE----------KVYLNISSIQNFEERFPTISALCEK-NGVDIETKRIPVVPGAH 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 355 YMMGGIptkvtgqalTVNEKGEdVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQgalRDASE 434
Cdd:PRK08071 330 FLMGGV---------KTNLDGE-TSIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHILTKATKP---RLNPF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 435 SDVEASLDRLNrwnnnrngedPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSsefntqrVECL 514
Cdd:PRK08071 397 AEKEKKFIVLN----------HLPTKEEIQEKMMKYVGIVRTEQSLSEAKRWLEKYGVRNMILDHDALT-------NEEI 459
|
490 500 510
....*....|....*....|....*....|....*....
gi 446698194 515 ELDNLMETAYATAVSANFRTESRGAHSRFDFPDRddeNW 553
Cdd:PRK08071 460 ELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR---NW 495
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
41-588 |
1.02e-83 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 273.26 E-value: 1.02e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 41 PTRSHTVSAQGGITVALGNTHEDNWEW-HMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRpf 119
Cdd:TIGR01811 33 PRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKRLAVASPEIIDLMDAMGVPFAREYGGLLDTR-- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 120 ggqskNFGGEQAARTAAAADRTGHALLHTLYQQnLKNH-----TTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFK 194
Cdd:TIGR01811 111 -----SFGGVQVSRTAYARGQTGQQLLLALDSA-LRRQiaaglVEKYEGWEMLDIIVVDGNRARGIIARNLVTGEIETHS 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 195 ARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAG------VLVTEGCRGEG------- 261
Cdd:TIGR01811 185 ADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGtwqsklRLMSESLRNDGriwtpke 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 262 ---GYLLNK--HGER--FMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAKLKLDH----LGKEVLESRLPGI 330
Cdd:TIGR01811 265 kndNRDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGV-GPGENAVYLDFSDaderLGRKEIDAKYGNL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 331 LELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTkvtgqaltvnEKGEDVVVPGLFAVGEiACVSVHGANRLGGNSLLDLVV 410
Cdd:TIGR01811 344 FEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWV----------DYDQMTNIPGLFAAGE-CDFSQHGANRLGANSLLSAIA 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 411 FGRAAG----------LHLQESIAEQGALRDASESDVEASLDRLNRWNNNrngEDPVAIRKALQECMQHNFSVFREGDAM 480
Cdd:TIGR01811 413 DGYFALpftipnylgpELSSEDMPEDAPEFQAALAEEQERFDRLLKMRGD---ENPYYLHRELGEIMTENCGVSRNNEKL 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 481 AKGLEQLKVIRERL-KNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFP------DRDDENW 553
Cdd:TIGR01811 490 LKTDEKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPEFPtpdgeaERNDEEF 569
|
570 580 590
....*....|....*....|....*....|....*....
gi 446698194 554 LCHSLYLPESES----MTRRSVNMEpklrpAFPPKIRTY 588
Cdd:TIGR01811 570 LKVTAWEFQGENdapeFHYEELDFE-----LVPPRKRDY 603
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
49-551 |
1.81e-81 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 264.85 E-value: 1.81e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 49 AQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKN--- 125
Cdd:PRK07512 50 AQGGIAAALGP--DDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRLALGLEAAHSRRriv 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 126 -FGGEQAartaaaadrtGHALLHTLYQQNLKN-HTTIFSEWYALDLVKnQDGAVVGctALCIETGEVVYFKARATVLATG 203
Cdd:PRK07512 128 hVGGDGA----------GAAIMRALIAAVRATpSITVLEGAEARRLLV-DDGAVAG--VLAATAGGPVVLPARAVVLATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 204 GAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAG---VLVTEGCRGEGGYLLNKHGERFMERYAPNA 280
Cdd:PRK07512 195 GIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDIGRdpaPLATEALRGEGAILINEDGERFMADIHPGA 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 281 kDLAGRDVVARSIMIEIREGRGcdgpwgphakLKLD---HLGKEvLESRLPGILELSRTfAHVDPVKEPIPVIPTCHYMM 357
Cdd:PRK07512 275 -ELAPRDVVARAVFAEIAAGRG----------AFLDaraALGAH-FATRFPTVYAACRS-AGIDPARQPIPVAPAAHYHM 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 358 GGIPTKVTGQAltvnekgedvVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGlhlqESIAEQGALRDASESDV 437
Cdd:PRK07512 342 GGIAVDADGRS----------SLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAA----EDIAGTPAAAAAPLSAA 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 438 EAsldrlnrwnNNRNGEDPVAIRKAlqecMQHNFSVFREGDAMAKGLEQLKVIRERLKNARlddtssefntqrvecleld 517
Cdd:PRK07512 408 AA---------PALDPADLALLRPI----MSRHVGVLRDADGLRRAIAALLPLEAGAGPAA------------------- 455
|
490 500 510
....*....|....*....|....*....|....
gi 446698194 518 NLMETAYATAVSANFRTESRGAHSRFDFPDRDDE 551
Cdd:PRK07512 456 DPATVALLIAVAALAREESRGAHFRTDFPLTAPA 489
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
34-551 |
4.38e-77 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 254.07 E-value: 4.38e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 34 ALLSKVFPTRSHTVSAQGGITVALGNTheDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDgr 113
Cdd:PRK09077 34 AVLSKGPLSEGSTFYAQGGIAAVLDET--DSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPFTTDEQ-- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 114 iYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLyQQNLKNH--TTIFSEWYALDLVK----NQDGA-VVGCTALCIE 186
Cdd:PRK09077 110 -ANGEEGYHLTREGGHSHRRILHAADATGKAVQTTL-VERARNHpnITVLERHNAIDLITsdklGLPGRrVVGAYVLNRN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 187 TGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGI---AGAGVLVTEGCRGEGGY 263
Cdd:PRK09077 188 KERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLyhpQARSFLITEALRGEGAY 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 264 LLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIREgRGCDgpwgpHAKLKLDHLGKEVLESRLPGILELSRTFAhVDPV 343
Cdd:PRK09077 268 LKLPDGTRFMPDFDERA-ELAPRDIVARAIDHEMKR-LGAD-----CVYLDISHKPADFIRQHFPTIYERCLELG-IDIT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 344 KEPIPVIPTCHYMMGGIPTKVTGQAltvnekgeDvvVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQE-- 421
Cdd:PRK09077 340 KEPIPVVPAAHYTCGGVMVDLHGRT--------D--LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDILSrl 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 422 -SIAEQGALRDASESDVEASldrlnrwnnnrnGEDPVairkalqecMQHNFSVFREgdAM---------AKGLEQLKViR 491
Cdd:PRK09077 410 pKAPMPPTLPAWDESRVTDS------------DEEVV---------IQHNWHELRL--FMwdyvgivrtTKRLERALH-R 465
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446698194 492 ERLKNARLDDTSSEFntqRV--ECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDE 551
Cdd:PRK09077 466 IRLLQQEIDEYYANF---RVsnNLLELRNLVQVAELIVRCAMERKESRGLHYTLDYPELLPE 524
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
35-423 |
3.02e-71 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 235.35 E-value: 3.02e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 35 LLSKVFPTRSHTVSAQGGITVALGnthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRI 114
Cdd:PRK06175 31 MVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDKDEKELS 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 115 YQRPfGGQSKNfggeqaaRTAAAADRTGHALLHTLYQQNLK-NHTTIFSEWYALDLVKNqDGAVVGctALCIETGEVVYF 193
Cdd:PRK06175 108 YTKE-GAHSVN-------RIVHFKDNTGKKVEKILLKKVKKrKNITIIENCYLVDIIEN-DNTCIG--AICLKDNKQINI 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 194 KARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPT-----GIAGAGVLVTEGCRGEGGYLLNKH 268
Cdd:PRK06175 177 YSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTafyeeTIEGKKFLISESVRGEGGKLLNSK 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 269 GERFMERYAPnakdlagRDVVARSIMIEIREGRgcdgpwGPHAKLKLDHLGKEVLESRLPGILE--LSRTfahVDPVKEP 346
Cdd:PRK06175 257 GERFVDELLP-------RDVVTKAILEEMKKTG------SNYVYLDITFLDKDFLKNRFPTIYEecLKRG---IDITKDA 320
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446698194 347 IPVIPTCHYMMGGIPTKVTGQALTVNekgedvvvpgLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI 423
Cdd:PRK06175 321 IPVSPAQHYFMGGIKVDLNSKTSMKN----------LYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAEKINSEI 387
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
460-588 |
4.68e-56 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 184.95 E-value: 4.68e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 460 RKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGA 539
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 446698194 540 HSRFDFPDRDDENWLCHSLYLPESES----MTRRSVNMEPKlrpaFPPKIRTY 588
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLAYYDGDDggprLEYEPVTFTTL----FPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
41-546 |
1.53e-48 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 175.76 E-value: 1.53e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 41 PTRSHTVSAQGGITVALgnTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPF--SRLDDGRIYQRP 118
Cdd:PRK08401 34 IKKSNSYLAQAGIAFPI--LEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLEFegNELEGGHSFPRV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 119 FGGQSKNfggeqaartaaaadrtGHALLHTLYQQnLKNHTTIFSEWYALDL-VKNqdGAVVGCtalcIETGEVVYFKAra 197
Cdd:PRK08401 112 FTIKNET----------------GKHIIKILYKH-ARELGVNFIRGFAEELaIKN--GKAYGV----FLDGELLKFDA-- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 198 TVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGA-GV-LVTEGCRGEGGYLLNKHGERFMer 275
Cdd:PRK08401 167 TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKrGTyLISEAVRGAGAKLVTGDGERFV-- 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 276 yapnaKDLAGRDVVARSIMIEIREGRGcdgpwgphakLKLDHLGKEVLESRLPGILELSRTfAHVDPVKEPIPVIPTCHY 355
Cdd:PRK08401 245 -----NELETRDIVARAIYRKMQEGKG----------VFLDATGIEDFKRRFPQIYAFLRK-EGIDPSRDLIPVTPIAHY 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 356 MMGGIPTKV---TGqaltvnekgedvvVPGLFAVGEIACVSVHGANRLGGNSLLDLVVfgraAGLHLQESIA-EQGALRD 431
Cdd:PRK08401 309 TIGGISVDTfyrTG-------------IKNLYAIGEAASNGFHGANRLASNSLLECIV----SGLEVARTISrERPKLRE 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 432 ASESdveasldrlnrwnnNRNGEDPVAIrKALQECMQHNFSVFREGDAMAKGLEQLKVIRErlknarlddtssefnTQRV 511
Cdd:PRK08401 372 VKEP--------------PYHGYELGDV-DSIREILWNHAGIVRSEESLREGLKKLEGIEA---------------DPRL 421
|
490 500 510
....*....|....*....|....*....|....*
gi 446698194 512 ECLeldnlmetAYATAVSANFRTESRGAHSRFDFP 546
Cdd:PRK08401 422 KLL--------AKGVLECALAREESRGAHYREDFP 448
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
62-416 |
1.09e-35 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 139.01 E-value: 1.09e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 62 EDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAI-LELEHMGLpfsRLDDGRIyqrpFGGQSKNfggeqAARTAAAADR 140
Cdd:TIGR01813 60 EDSPELFIKDTLKGGRGINDPELVRILAEESKDAVdWLQDGVGA---RLDDLIQ----LGGHSVP-----RAHRPTGGAA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 141 TGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALcIETGEVVYFKARATVLATGGAGRIYQ---------- 210
Cdd:TIGR01813 128 SGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQDDQGSVVGVVVK-GKGKGIYIKAAKAVVLATGGFGSNKEmiakydptlk 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 211 --STTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTG-IAGAGVLVTEGCRGEGGYLLNKHGERFMEryapnakDLAGRD 287
Cdd:TIGR01813 207 hlGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTGERFMN-------ELATRD 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 288 VVARSIMieIREGRG----CDGPWGPHAKLKLDHLGKEVLEsRLPGILELS----------------------------- 334
Cdd:TIGR01813 280 KVSDAIL--AQPGKDayliFDDDVYKKAKMVDNYYRLGVAY-KGDSLEELAkqfgipaaalkqtikdyngyvasgkdtpf 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 335 --RTFAHVDPVKEPIPVI---PTCHYMMGGIptKVTGQALTVNEKGEdvVVPGLFAVGEIACvSVHGANRLGGNSLLDLV 409
Cdd:TIGR01813 357 grPMDMPTDLSKAPYYAIkvtPGVHHTMGGV--KINTKAEVLDANGK--PIPGLFAAGEVTG-GVHGANRLGGNAIADCI 431
|
....*..
gi 446698194 410 VFGRAAG 416
Cdd:TIGR01813 432 VFGRIAG 438
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
38-556 |
1.58e-35 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 141.49 E-value: 1.58e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 38 KVF-----PTRSHTVSAQGGITVAlGNTHEDN---WEwHMYDTVKGSDYIGDQDAIEYMCKTGPEAIlelEHM---GLPF 106
Cdd:PRK07573 62 KVFcyqdsPRRAHSIAAQGGINAA-KNYQNDGdsvYR-LFYDTVKGGDFRAREANVYRLAEVSVNII---DQCvaqGVPF 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 107 SRLDDGRIYQRPFGG-Q-SKNF---G--GEQaartaaaadrtghaLLHTLYQ----QNLKNHTTIFSEWYALDLVKNqDG 175
Cdd:PRK07573 137 AREYGGLLANRSFGGaQvSRTFyarGqtGQQ--------------LLLGAYQalsrQIAAGTVKMYTRTEMLDLVVV-DG 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 176 AVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAhinTGDGVGMAIRA---GVPVQDMEMWQFHPTGIAGAG-- 250
Cdd:PRK07573 202 RARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNA---MGSNATAIWRAhkkGAYFANPCFTQIHPTCIPVSGdy 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 251 ----VLVTEGCRGEGGYLLNKH------------GER--FMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAK 312
Cdd:PRK07573 279 qsklTLMSESLRNDGRIWVPKKkgdkrkpndipeEERdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGV-GPTGLGVY 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 313 LKL----DHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAltvnekgedvVVPGLFAVGE 388
Cdd:PRK07573 358 LDFadaiKRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDYNLMS----------TIPGLFVIGE 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 389 iACVSVHGANRLGGNSLLDLVVFG----------RAAGLHLQESIAEQGALRDASESDVEASLDrlnrWNNNRNGEDPVA 458
Cdd:PRK07573 428 -ANFSDHGANRLGASALMQGLADGyfvlpytignYLADTIGTPKVSTDHPEFKEAEAEVQDRID----RLLNIKGKRTVD 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 459 -IRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERL-KNARLDDTSSEFNTQ-----RV-ECLELDNLMetayatAVSA 530
Cdd:PRK07573 503 sFHRELGKIMWDYCGMARNEEGLKKALEKIRALREEFwKNVRVPGSADELNQElekagRVaDFLELGELM------CRDA 576
|
570 580 590
....*....|....*....|....*....|..
gi 446698194 531 NFRTESRGAHSRFDF--PD----RDDENWlCH 556
Cdd:PRK07573 577 LHREESCGGHFREEHqtEDgealRDDENF-AY 607
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
142-575 |
3.54e-33 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 133.64 E-value: 3.54e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 142 GHALLHTLYQQnLKNHTTIFSEWY-ALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI-----------Y 209
Cdd:PRK08275 136 GHDIKKVLYRQ-LKRARVLITNRImATRLLTDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRLglpasgylfgtY 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 210 QSTTNAhintGDGVGMAIRAGVPVQDMEMWQFHP-----TGIAGAGVlvtegcRGE-GGYLLNKHGERFMERYAPNAKdl 283
Cdd:PRK08275 215 ENPTNA----GDGYAMAYHAGAELANLECFQINPlikdyNGPACAYV------TGPlGGYTANAKGERFIECDYWSGQ-- 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 284 agrdvvarsIMIEI-REGRGCDGPwgphAKLKLDHLGKEV---LESRLPGILELSRTFAHV--------DPVKEPIPVIP 351
Cdd:PRK08275 283 ---------MMWEFyQELQSGNGP----VFLKLDHLAEETiqtIETILHTNERPSRGRFHEgrgtdyrqQMVEMHISEIG 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 352 TChymmggiptkvTGQALT---VNEKGEdVVVPGLFAVGEIACVsvhganrlGGNSLLDLVVFGRAAGLHLQESIAEQgA 428
Cdd:PRK08275 350 FC-----------SGHSASgvwVNEKAE-TTVPGLYAAGDMASV--------PHNYMLGAFTYGWFAGENAAEYVAGR-D 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 429 LRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSsefNT 508
Cdd:PRK08275 409 LPEVDAAQVEAERARVLAPLHREDGLPPAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARDPH---EL 485
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 509 QRVecLELDNLMETAYATAVSANFRTESRGA--HSRFDFPDRDDENWLCHS-LYLPESESMTRRSVNMEP 575
Cdd:PRK08275 486 MRA--LEVSSIRDCAEMAARASLFRTESRWGlyHYRVDFPERNDAEWFCHThLRKDEDGRMVSFKRPVEP 553
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
7-426 |
3.30e-28 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 118.40 E-value: 3.30e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHE-----DNWEWHMYDTVKGSDYIGD 81
Cdd:PRK06481 61 KYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKaqgiaDSNDKFYEETLKGGGGTND 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 82 QDAIEYMCKTGPEAILELEHMGLPFSRLDDGriyqrpfGGQSknfggEQAARTAAAADRTGHALLHTLYQQNLKNHTTIF 161
Cdd:PRK06481 141 KALLRYFVDNSASAIDWLDSMGIKLDNLTIT-------GGMS-----EKRTHRPHDGSAVGGYLVDGLLKNVQERKIPLF 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 162 SEWYALDLVKnQDGAVVGCTALcIETGEVVYFKARATVLATGGAGRIYQ------------STTNAHINTGDGVGMAIRA 229
Cdd:PRK06481 209 VNADVTKITE-KDGKVTGVKVK-INGKETKTISSKAVVVTTGGFGANKDmiakyrpdlkgyVTTNQEGSTGDGIKMIEKL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 230 GVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFM-----------------ERYAPNAKDLAGRDVVaRS 292
Cdd:PRK06481 287 GGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKDRV-KA 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 293 IMIEIREGRGCDGPwgphaklKLDHLGKE--VLESRLPGIL-------------ELSRTFA-HVDPVKEP---IPVIPTC 353
Cdd:PRK06481 366 IAQYEEKGFVEEGK-------TIDELAKKinVPAETLTKTLdtwnkavknkkdeAFGRTTGmDNDLSTGPyyaIKIAPGI 438
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446698194 354 HYMMGGIPTKVTGQALTvnEKGEDvvVPGLFAVGEIACvSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQ 426
Cdd:PRK06481 439 HYTMGGVKINTNTEVLK--KDGSP--ITGLYAAGEVTG-GLHGENRIGGNSVADIIIFGRQAGTQSAEFAKAQ 506
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
94-416 |
8.31e-25 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 109.87 E-value: 8.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 94 EAILELEHMGLPFSRLddgriYQrpFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQ---NLKNHTTIFSEWYALDLV 170
Cdd:PTZ00306 502 DAISWLSSLGVPLTVL-----SQ--LGGASRKRCHRAPDKKDGTPVPIGFTIMRTLEDHirtKLSGRVTIMTETTVTSLL 574
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 171 KNQ----DGA----VVGC--TALCIETGEVVYFKARATVLATGG--------------AGRIYQ-STTNAHINTGDGVGM 225
Cdd:PTZ00306 575 SESsarpDGVreirVTGVryKQASDASGQVMDLLADAVILATGGfsndhtpnsllreyAPQLSGfPTTNGPWATGDGVKL 654
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 226 AIRAGVPVQDMEMWQFHPTGIAG-------AGVLVTEGCRGEGGYLLNKHGERFMeryapNAKDLagRDVVARSIMIEIR 298
Cdd:PTZ00306 655 ARKLGATLVDMDKVQLHPTGLIDpkdpsnrTKYLGPEALRGSGGVLLNKNGERFV-----NELDL--RSVVSQAIIAQGN 727
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 299 EGRGCDGPWGPHAKL-----KLdhLGKEVLE------------------SRLPG--ILELSRT---FAHVDPVKEPIP-- 348
Cdd:PTZ00306 728 EYPGSGGSKFAYCVLneaaaKL--FGKNSLGfywkrlglfqrvddvkglAKLIGcpVENLHRTletYERLSTKKVACPlt 805
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 349 -------------------VIPTCHYMMGG--------IPTKVTGQALTVNEKGedvvVPGLFAVGEIACvSVHGANRLG 401
Cdd:PTZ00306 806 gkvvfpcvvgtqgpyyvafVTPSIHYTMGGclispsaeMQMEDNSVNIFEDRRP----ILGLFGAGEVTG-GVHGGNRLG 880
|
410
....*....|....*
gi 446698194 402 GNSLLDLVVFGRAAG 416
Cdd:PTZ00306 881 GNSLLECVVFGKIAG 895
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
170-579 |
2.34e-19 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 92.22 E-value: 2.34e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 170 VKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI-----------YQSTTNAhintGDGVGMAIRAGVPVQDMEM 238
Cdd:PRK13800 169 VLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLglpasgylygtYENPTNA----GDGYSMAYHAGAELSGIEC 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 239 WQFHP-----TGIAGAGVlvtegCRGEGGYLLNKHGERFMERyapnakdlagrDVVARSIMIEIRegRGCDGPWGPhAKL 313
Cdd:PRK13800 245 FQINPlikdyNGPACAYV-----ANPFGGYQVNAQGERFVDS-----------DYWSGQMMAEVK--REIESARGP-IYL 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 314 KLDHLGKEVLeSRLPGILELSR-----TFaHVD--------PVKEPIPVIPTC--HYMMGgipTKVTGQALTVnekgedv 378
Cdd:PRK13800 306 KVSHLPEETL-SALESILHTTErptrgTF-HANrghdyrthDIEMHISEIGLCsgHSASG---VWVDEHARTT------- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 379 vVPGLFAVGEIACVSvHganrlggNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVA 458
Cdd:PRK13800 374 -VPGLYAAGDLACVP-H-------NYMIGAFVFGDLAGAHAAGTLAEVPAPGELPADQLAEAHELIYRPLRHPDGPPQPQ 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 459 IRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLK--NARlddTSSEFntqrVECLELDNLMETAYATAVSANFRTES 536
Cdd:PRK13800 445 VEYKLRRFVNDYVAPPKTAAKLSIAVETFERMAAEIAgmGAR---TPHEL----MRCAEVSFIRDCAEMAARSSLTRTES 517
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 446698194 537 RGA--HSRFDFPDRDDENWLCHsLYLPESES----MTRRSVnmEPKLRP 579
Cdd:PRK13800 518 RWGlyHDRADLPERDDASWGYH-LNLRKGDDgemeFLKRPV--APYFVP 563
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
152-572 |
2.67e-19 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 91.52 E-value: 2.67e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 152 QNLKNHTTIFsewyalDLVKNqDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQ--STTNAH-------INTGDG 222
Cdd:PRK06854 148 DNVLNRVFIT------DLLVD-DNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRprSPGEGRgrmwyppFNTGSG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 223 VGMAIRAGVPVQDMEMwQFHPT----GIA--GAGVLvtegcrGEGGYLLNKHGERFMERYAPNAKDLAGRDVVAR----- 291
Cdd:PRK06854 221 YAMGIRAGAEMTTFEN-RFIPLrfkdGYGpvGAWFL------LFKAKAVNALGEEYEAKNAAELKKYVPYADYKPiptcl 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 292 ---SIMIEIREGRgcdgpwGP-----HAKLKLDHLGKEVLESRL---PGILELSRTfAHVDPVKEPIPVIPTCHYMMGGi 360
Cdd:PRK06854 294 rnyATVEENKAGR------GPiymdtEEALQDKHLESELWEDFLdmtPGQALLWAA-QNIEPEEENSEIMGTEPYIVGS- 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 361 ptKVTGQALTVNEKGEDVV------------VPGLFAVGEIACVSVH----GA---NRLGGNSLLDLVVFGRAAGLHLQE 421
Cdd:PRK06854 366 --HSGASGYWVSGPEDWVPeeykwgynrmttVEGLFAAGDVVGGSPHkfssGSfaeGRIAAKAAVRYILDNKDEKPEIDD 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 422 SIAEQGALR-DASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECM-----------QHNfsvfreGDAMAKGLEQLKV 489
Cdd:PRK06854 444 DQIEELKKEiYAPLERYEEFKDYSTDPDVNPNYISPEQLEERLQKIMdeyaggistnyTTN------EKLLEIALELLEM 517
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 490 IRERLKNARLDDTSsefntQRVECLELDNLMETAYATAVSANFRTESR--GAHSRFDFPDRDDENWLC--HSLYLPESES 565
Cdd:PRK06854 518 LEEDSEKLAARDLH-----ELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDDENWKCfvNSRYDPGTGE 592
|
....*..
gi 446698194 566 MTRRSVN 572
Cdd:PRK06854 593 WTIRKLP 599
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
166-418 |
1.94e-06 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 50.66 E-value: 1.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 166 ALDLVKNQDGAVVGCTALCIetGEVVYFKAR-ATVLATGG---------------AGRIYQSTTNahiNTGDGVGMAIRA 229
Cdd:PRK07121 200 ATRLIVDDDGRVVGVEARRY--GETVAIRARkGVVLAAGGfamnremvaryapayAGGLPLGTTG---DDGSGIRLGQSA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 230 GVPVQDMEM---WQFhptgIAGAGVLVTegcrgegGYLLNKHGERF--------------MERYAPNAKDLAGRDVVARS 292
Cdd:PRK07121 275 GGATAHMDQvfaWRF----IYPPSALLR-------GILVNARGQRFvnedtygarigqfiLEQPGGTAYLIVDEALFEEA 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 293 IMIEiregRGCDGPWGPHAKlKLDHLgkEVLESRL---PGILElsRTFAH--------VDPV--KEP------------- 346
Cdd:PRK07121 344 RAQL----RPQIDGRTPGAW-KAETV--EELARKLgipPGGLQ--ATVDAynraaaggEDPPfhKQPewlrpldtgpfaa 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 347 ----IPVIPTCHYMMGGIPTKV-TGQALtvNEKGEdvVVPGLFAVGEIAC-------VSvhganrlgGNSLLDLVVFGRA 414
Cdd:PRK07121 415 idlsLGKAPTPGFTLGGLRVDEdTGEVL--RADGA--PIPGLYAAGRCASgiasngyVS--------GLSLADCSFFGRR 482
|
....
gi 446698194 415 AGLH 418
Cdd:PRK07121 483 AGRH 486
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
142-418 |
1.99e-05 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 47.44 E-value: 1.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKnQDGAVVGCTAlcIETGEVVYFKARATVL-ATGGAG------RIYQ---- 210
Cdd:PRK12844 207 GAALIGRMLEAALAAGVPLWTNTPLTELIV-EDGRVVGVVV--VRDGREVLIRARRGVLlASGGFGhnaemrKRYQpqpn 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 211 --STTNAHI-NTGDGVGMAIRAGVPVQDMEM--W---QFHPTGIAGAGVLVTEGCRgEGGYLLNKHGERFMER---YAPN 279
Cdd:PRK12844 284 sgDWTNANPgDTGEVIEAAMRLGAALDLMDEawWvpgAPLPNGGPRPYMHNSERSK-PGSIIVDRAGRRFVNEagsYMEV 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 280 AKDLAGRDVV-ARSIMIEIREGRgcdGPWGPHAKLKLDhlgKEVLES----RLPGILELSR-----------------TF 337
Cdd:PRK12844 363 GRAMYAQDAVpAWMIMDSRYRKR---YLFGTIPPGPTP---QEWLDSgymkRADTIEELAGktgidpaglaatverfnGF 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 338 A------------------HVDPVKEPIP-----VIPTCHYMM---------GGIPTKVTGQALTVNekgeDVVVPGLFA 385
Cdd:PRK12844 437 AatgtdpdfhrgesaydryYGDPTNKPNPslgplDKPPFYAVRmvpgdvgtsGGLLTDEHARVLRED----GSVIPGLYA 512
|
330 340 350
....*....|....*....|....*....|....
gi 446698194 386 VGEiACVSVHGANRLG-GNSLLDLVVFGRAAGLH 418
Cdd:PRK12844 513 TGN-CTASVMGRTYPGaGASIGNSFVFGYIAALH 545
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
168-278 |
2.97e-05 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 46.95 E-value: 2.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 168 DLVKnQDGAVVGCTALciETGEVVYFKAR-ATVLATGG-----AGRI-YQS-------TTNAHINTGDGVGMAIRAGVPV 233
Cdd:PRK07843 233 DLYV-EDGRVTGVHAA--ESGEPQLIRARrGVILASGGfehneQMRAkYQRapigtewTVGAKANTGDGILAGEKLGAAL 309
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 446698194 234 QDMEMWQFHPTgiagagVLVTEG---CRGE----GGYLLNKHGERFMERYAP 278
Cdd:PRK07843 310 DLMDDAWWGPT------IPLPGGpwfALSErnlpGSIIVNMSGKRFMNESAP 355
|
|
| PRK12837 |
PRK12837 |
FAD-binding protein; |
168-291 |
1.36e-03 |
|
FAD-binding protein;
Pssm-ID: 237222 [Multi-domain] Cd Length: 513 Bit Score: 41.35 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 168 DLVKnQDGAVVGctALCIETGEVVYFKARATV-LATGGAgriyqsTTNAHINTGDGV--------------GMAIRAGVP 232
Cdd:PRK12837 199 ELVV-EDGRVVG--AVVERGGERRRVRARRGVlLAAGGF------EQNDDMRARYGVpgsardtmggpgntGLAHQAAIA 269
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446698194 233 V------QDMEMWQ---FHPTGIAGAGVLVTegcrgeGGYLLNKHGERFMERYAPnaKDLAGRDVVAR 291
Cdd:PRK12837 270 VgadtdlMDQAWWSpglTHPDGRSAFALWFT------GGIFVDQHGERFVNESAP--YDRLGRAVIAE 329
|
|
| PRK12835 |
PRK12835 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
168-278 |
4.28e-03 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 237221 [Multi-domain] Cd Length: 584 Bit Score: 40.17 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446698194 168 DLVKNQDGAVVGctALCIETGEVVYFKARATV-LATGG-------------AGRIYQSTTNAHINTGDGVGMAIRAGVPV 233
Cdd:PRK12835 238 ELITDPDGAVVG--AVVEREGRTLRIGARRGViLATGGfdhdmdwrkeylpELERKDWSFGNPANTGDGIRAGEKVGAAT 315
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 446698194 234 QDM-EMWQF----HPTGIagAGVLVTEGCRgEGGYLLNKHGERFMERYAP 278
Cdd:PRK12835 316 DLLdEAWWFpaicWPDGR--MQFMLNERMM-PAQFIVNGAGKRFINEAAP 362
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
357-422 |
4.51e-03 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 39.88 E-value: 4.51e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446698194 357 MGGIPTKVTGQALtvNEKGEdvVVPGLFAVGEIACV---SVHGANRLGGNSLLDLVVFGRAAGLHLQES 422
Cdd:PRK12834 485 LGGLETDLDSRVL--GADGT--PLPGLYAAGEAAGFgggGVHGYNALEGTFLGGCIFSGRAAGRAAARA 549
|
|
| |
