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Conserved domains on  [gi|446689849|ref|WP_000767195|]
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DUF1827 family protein [Streptococcus pneumoniae]

Protein Classification

DUF1827 family protein( domain architecture ID 10556100)

DUF1827 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1827 pfam08860
Domain of unknown function (DUF1827); This presumed domain has no known function.
 2-97 3.20e-41

Domain of unknown function (DUF1827); This presumed domain has no known function.


:

Pssm-ID: 430267  Cd Length: 91  Bit Score: 130.46  E-value: 3.20e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446689849   2 KLINTTNSHSQLVKSQLESTDATLVEVYSAGNTDVIFTQAPLHYEILISNKHRAIREPEIETIQEFFLKRKIdktsvDEA 81
Cdd:pfam08860  1 KLINVTNSHSRLVQRQLANTDAHFVKVYSLGNTTVVFTEAPKHYEILISNKKRAIRENEIEFIIEFLLKRKI-----DPD 75

                         90
                 ....*....|....*.
gi 446689849  82 NIKTLYSEKLIGISIP 97
Cdd:pfam08860 76 QITILKTRKLVEISIP 91
 
Name Accession Description Interval E-value
DUF1827 pfam08860
Domain of unknown function (DUF1827); This presumed domain has no known function.
 2-97 3.20e-41

Domain of unknown function (DUF1827); This presumed domain has no known function.


Pssm-ID: 430267  Cd Length: 91  Bit Score: 130.46  E-value: 3.20e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446689849   2 KLINTTNSHSQLVKSQLESTDATLVEVYSAGNTDVIFTQAPLHYEILISNKHRAIREPEIETIQEFFLKRKIdktsvDEA 81
Cdd:pfam08860  1 KLINVTNSHSRLVQRQLANTDAHFVKVYSLGNTTVVFTEAPKHYEILISNKKRAIRENEIEFIIEFLLKRKI-----DPD 75

                         90
                 ....*....|....*.
gi 446689849  82 NIKTLYSEKLIGISIP 97
Cdd:pfam08860 76 QITILKTRKLVEISIP 91
 
Name Accession Description Interval E-value
DUF1827 pfam08860
Domain of unknown function (DUF1827); This presumed domain has no known function.
 2-97 3.20e-41

Domain of unknown function (DUF1827); This presumed domain has no known function.


Pssm-ID: 430267  Cd Length: 91  Bit Score: 130.46  E-value: 3.20e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446689849   2 KLINTTNSHSQLVKSQLESTDATLVEVYSAGNTDVIFTQAPLHYEILISNKHRAIREPEIETIQEFFLKRKIdktsvDEA 81
Cdd:pfam08860  1 KLINVTNSHSRLVQRQLANTDAHFVKVYSLGNTTVVFTEAPKHYEILISNKKRAIRENEIEFIIEFLLKRKI-----DPD 75

                         90
                 ....*....|....*.
gi 446689849  82 NIKTLYSEKLIGISIP 97
Cdd:pfam08860 76 QITILKTRKLVEISIP 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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