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Conserved domains on  [gi|446678737|ref|WP_000756083|]
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MULTISPECIES: APC family permease [Salmonella]

Protein Classification

APC family permease( domain architecture ID 11425014)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0016020|GO:0055085|GO:0022857|GO:0015171|GO:0006865
PubMed:  23177982|24038584|25043943|10931886
SCOP:  4006243
TCDB:  2.A.3.1|2.A.3

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
2-433 7.13e-59

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


:

Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 198.97  E-value: 7.13e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   2 KKVKKLSLTDLVLYGLVFMVPIAPVSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINP 81
Cdd:COG0531    8 ELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  82 AVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFVL 161
Cdd:COG0531   88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 162 LIvrLLMLDSSQITlsfrpFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFIIv 241
Cdd:COG0531  168 VG--LFAFDPANFT-----PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYIL- 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 242 VAFAAFATGNVDRFAEGNAtneAFFTIAGNVGGIWLKVAFSIIVAFVCaVGNIITAQTAVSRVLFSMGRDRMLPAFLAHV 321
Cdd:COG0531  240 VSLALTGVVPYDELAASGA---PLADAAEAVFGPWGAILIALGALLSL-LGALNASILGASRLLYAMARDGLLPKVFAKV 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 322 HTTRKTPDYAILFTGGVTLLLSYLFSGKIESISTLVNFGALFAFFVVNLCVFILFNFRMKAQRRI-FAHVISPIMGMIVI 400
Cdd:COG0531  316 HPRFGTPVNAILLTGVIALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFrVPLPLIPILGILLC 395

                        410       420       430
                 ....*....|....*....|....*....|...
gi 446678737 401 GYVCLNMNIHALILGISWAAIGIAILCYRKAHN 433
Cdd:COG0531  396 LFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRH 428
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
2-433 7.13e-59

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 198.97  E-value: 7.13e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   2 KKVKKLSLTDLVLYGLVFMVPIAPVSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINP 81
Cdd:COG0531    8 ELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  82 AVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFVL 161
Cdd:COG0531   88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 162 LIvrLLMLDSSQITlsfrpFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFIIv 241
Cdd:COG0531  168 VG--LFAFDPANFT-----PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYIL- 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 242 VAFAAFATGNVDRFAEGNAtneAFFTIAGNVGGIWLKVAFSIIVAFVCaVGNIITAQTAVSRVLFSMGRDRMLPAFLAHV 321
Cdd:COG0531  240 VSLALTGVVPYDELAASGA---PLADAAEAVFGPWGAILIALGALLSL-LGALNASILGASRLLYAMARDGLLPKVFAKV 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 322 HTTRKTPDYAILFTGGVTLLLSYLFSGKIESISTLVNFGALFAFFVVNLCVFILFNFRMKAQRRI-FAHVISPIMGMIVI 400
Cdd:COG0531  316 HPRFGTPVNAILLTGVIALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFrVPLPLIPILGILLC 395

                        410       420       430
                 ....*....|....*....|....*....|...
gi 446678737 401 GYVCLNMNIHALILGISWAAIGIAILCYRKAHN 433
Cdd:COG0531  396 LFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRH 428
AA_permease_2 pfam13520
Amino acid permease;
35-409 1.40e-17

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 84.28  E-value: 1.40e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   35 LSHGMVALVYIIGAIAMFFTA--YSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLF-PTLVAVLGGVAVH 111
Cdd:pfam13520  26 ASGGPALIVWGWIAAIIFSLAvgLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYVLGlASSASVAASYLLS 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  112 AILPQIPVWVWPLIYVAIG-----TGVNYLGIQQTAKFDKLLVFIQLGILAIFVLLIVrLLMLDSSQITLSFRPFFDSQW 186
Cdd:pfam13520 106 ALGPDLVPTTWLTYGIAIAiliifAIINIRGVRESAKIQNILGILKLLLPLILIIILG-LVTADGGGFNLLSGEWHTFFP 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  187 FTPGLIATAISVAALNFLGFDAISTLSEESEgggRAVSKATLLALVLATVLFIIVVAFAAFATGNVDRFAEGNATNEAFF 266
Cdd:pfam13520 185 DGWPGVFAGFLGVLWSFTGFESAANVSEEVK---KRNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVAA 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  267 TIAGNVGGIWLKVAFSIIVAFVCAvGNIITAQTAVSRVLFSMGRDRMLPA--FLAHVHtTRKTPDYAILFTGGVTLLLSY 344
Cdd:pfam13520 262 LLFQAVGGKWGAIIVVILLALSLL-GAVNTAIVGASRLLYALARDGVLPFsrFFAKVN-KFGSPIRAIILTAILSLILLL 339

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446678737  345 LFSGKIESISTLVNFGALFAFFV--VNLCVFILFNFRMKAQRRIFAHVISPIMGMIVIGYVCLNMNI 409
Cdd:pfam13520 340 LFLLSPAAYNALLSLSAYGYLLSylLPIIGLLILRKKRPDLGRIPGRWPVAIFGILFSLFLIVALFF 406
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 5-375 6.05e-17

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 82.94  E-value: 6.05e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737    5 KKLSLTDLVLYGLVFMVPIAPVSLYG-VVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAV 83
Cdd:TIGR00906  28 RCLTTWDLMALGIGSTIGAGIYVLTGeVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELW 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   84 GFLTGWILLLDYLLFPTLVAvLGGVAVHAILPQIPVWVWPLIYVAIG-------------------TGVNYLGIQQTAKF 144
Cdd:TIGR00906 108 AFITGWNLILEYVIGTAAVA-RSWSAYFDELLNKQIGQFRRTYFKLNydglaeypdffavclilllAVLLSFGVKESAWV 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  145 DKLLVFIQLGILAiFVLlIVRLLMLDSSQITLSFRPffDSQWFTPGLIATAISVAA---LNFLGFDAISTLSEESEGGGR 221
Cdd:TIGR00906 187 NKIFTAINILVLL-FVI-IAGFTKADVANWSITEEK--GAGGFMPYGFTGVLSGAAtcfFAFIGFDAIATTGEEVKNPQR 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  222 AVSkatLLALVLATVLFIIVVAFAAFATGNVDRFAEGnaTNEAFFTIAGNVGGIWLKVAFSiiVAFVCAVGN-IITAQTA 300
Cdd:TIGR00906 263 AIP---IGIVTSLLVCFVAYFLMSAALTLMMPYYLLD--PDAPFPVAFEYVGWDPAKYIVA--VGALCGMSTsLLGGMFP 335

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446678737  301 VSRVLFSMGRDRMLPAFLAHVHTTRKTPDYAILFTGGVTLLLSYLFsgKIESISTLVNFGALFAFFVVNLCVFIL 375
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLF--DLKALVDLLSIGTLLAYSLVAACVLIL 408
PRK10249 PRK10249
phenylalanine transporter; Provisional
 40-421 8.89e-08

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 54.22  E-value: 8.89e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  40 VALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPV 119
Cdd:PRK10249  56 VLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPT 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 120 WVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQlgILAIFVLLIVRLLMLDSSQitLSFRPFFDSQWFTPGLIAT----- 194
Cdd:PRK10249 136 WIWAAAFFIIINAVNLVNVRLYGETEFWFALIK--VLAIIGMIGFGLWLLFSGH--GGEKASIDNLWRYGGFFATgwngl 211

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 195 --AISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFI--IVVAFAAFAtgnvdrFAEGNATNEAFFTIAG 270
Cdd:PRK10249 212 ilSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIgsLVVLLALYP------WVEVKSNSSPFVMIFH 285

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 271 NVGGIWLKVAFSIIVaFVCAVGNIITAQTAVSRVLFSMGRDRMLPAFLAHVhTTRKTPDYAILFTGGVT---LLLSYLFS 347
Cdd:PRK10249 286 NLDSNVVASALNFVI-LVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRV-SRRGVPINSLMLSGAITslvVLINYLLP 363

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 348 GKIesistlvnFGALFAFFV----VNLCVFILFNFRMKAQRR------IFAHVISPIMGMIVIGYVCLNMNIHALILGIS 417
Cdd:PRK10249 364 QKA--------FGLLMALVVatllLNWIMICLAHLRFRAAMRrqgretQFKALLYPFGNYLCIAFLGMILLLMCTMDDMR 435


                 ....
gi 446678737 418 WAAI 421
Cdd:PRK10249 436 LSAI 439
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
2-433 7.13e-59

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 198.97  E-value: 7.13e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   2 KKVKKLSLTDLVLYGLVFMVPIAPVSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINP 81
Cdd:COG0531    8 ELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  82 AVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFVL 161
Cdd:COG0531   88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 162 LIvrLLMLDSSQITlsfrpFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFIIv 241
Cdd:COG0531  168 VG--LFAFDPANFT-----PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYIL- 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 242 VAFAAFATGNVDRFAEGNAtneAFFTIAGNVGGIWLKVAFSIIVAFVCaVGNIITAQTAVSRVLFSMGRDRMLPAFLAHV 321
Cdd:COG0531  240 VSLALTGVVPYDELAASGA---PLADAAEAVFGPWGAILIALGALLSL-LGALNASILGASRLLYAMARDGLLPKVFAKV 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 322 HTTRKTPDYAILFTGGVTLLLSYLFSGKIESISTLVNFGALFAFFVVNLCVFILFNFRMKAQRRI-FAHVISPIMGMIVI 400
Cdd:COG0531  316 HPRFGTPVNAILLTGVIALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFrVPLPLIPILGILLC 395

                        410       420       430
                 ....*....|....*....|....*....|...
gi 446678737 401 GYVCLNMNIHALILGISWAAIGIAILCYRKAHN 433
Cdd:COG0531  396 LFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRH 428
AA_permease_2 pfam13520
Amino acid permease;
35-409 1.40e-17

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 84.28  E-value: 1.40e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   35 LSHGMVALVYIIGAIAMFFTA--YSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLF-PTLVAVLGGVAVH 111
Cdd:pfam13520  26 ASGGPALIVWGWIAAIIFSLAvgLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYVLGlASSASVAASYLLS 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  112 AILPQIPVWVWPLIYVAIG-----TGVNYLGIQQTAKFDKLLVFIQLGILAIFVLLIVrLLMLDSSQITLSFRPFFDSQW 186
Cdd:pfam13520 106 ALGPDLVPTTWLTYGIAIAiliifAIINIRGVRESAKIQNILGILKLLLPLILIIILG-LVTADGGGFNLLSGEWHTFFP 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  187 FTPGLIATAISVAALNFLGFDAISTLSEESEgggRAVSKATLLALVLATVLFIIVVAFAAFATGNVDRFAEGNATNEAFF 266
Cdd:pfam13520 185 DGWPGVFAGFLGVLWSFTGFESAANVSEEVK---KRNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVAA 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  267 TIAGNVGGIWLKVAFSIIVAFVCAvGNIITAQTAVSRVLFSMGRDRMLPA--FLAHVHtTRKTPDYAILFTGGVTLLLSY 344
Cdd:pfam13520 262 LLFQAVGGKWGAIIVVILLALSLL-GAVNTAIVGASRLLYALARDGVLPFsrFFAKVN-KFGSPIRAIILTAILSLILLL 339

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446678737  345 LFSGKIESISTLVNFGALFAFFV--VNLCVFILFNFRMKAQRRIFAHVISPIMGMIVIGYVCLNMNI 409
Cdd:pfam13520 340 LFLLSPAAYNALLSLSAYGYLLSylLPIIGLLILRKKRPDLGRIPGRWPVAIFGILFSLFLIVALFF 406
AA_permease pfam00324
Amino acid permease;
26-409 3.86e-17

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 83.14  E-value: 3.86e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   26 VSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLFPTLVAVL 105
Cdd:pfam00324  17 VGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWNYWLSWITVLALELTA 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  106 GGVAVH--AILPQIP-VWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFVLLIVRLLMLDSSQITLSFRPFF 182
Cdd:pfam00324  97 ASILIQfwELVPDIPyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIILLSGGNPNDGAIFRYLG 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  183 DS---QWFTPGL---IATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFIIVVAFAAF-----ATGN 251
Cdd:pfam00324 177 DNggkNNFPPGFgkgFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYILSLLAIGLlvpwnDPGL 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  252 VDRFAEGNATNEAFFTIAGNVGGIWLKVAFSIIVAFVCAVGNIITAqtavSRVLFSMGRDRMLPAFLAhVHTTRKTPDYA 331
Cdd:pfam00324 257 LNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSG----SRMLYSLARDGLAPKFLK-KVDKRGVPLRA 331

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  332 ILFT---GGVTLLLSYLFSGKIESI-STLVNFGALFAFFVVNLCvFILFNFRMKAQRRIFAHVISPIMGMIVIGYVCLNM 407
Cdd:pfam00324 332 ILVSmviSLLALLLASLNPAIVFNFlLAISGLSGLIVWGLISLS-HLRFRKAFKYQGRSIDELPFKAPLGPLGVILGLAA 410


                  ..
gi 446678737  408 NI 409
Cdd:pfam00324 411 II 412
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 5-375 6.05e-17

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 82.94  E-value: 6.05e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737    5 KKLSLTDLVLYGLVFMVPIAPVSLYG-VVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAV 83
Cdd:TIGR00906  28 RCLTTWDLMALGIGSTIGAGIYVLTGeVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELW 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   84 GFLTGWILLLDYLLFPTLVAvLGGVAVHAILPQIPVWVWPLIYVAIG-------------------TGVNYLGIQQTAKF 144
Cdd:TIGR00906 108 AFITGWNLILEYVIGTAAVA-RSWSAYFDELLNKQIGQFRRTYFKLNydglaeypdffavclilllAVLLSFGVKESAWV 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  145 DKLLVFIQLGILAiFVLlIVRLLMLDSSQITLSFRPffDSQWFTPGLIATAISVAA---LNFLGFDAISTLSEESEGGGR 221
Cdd:TIGR00906 187 NKIFTAINILVLL-FVI-IAGFTKADVANWSITEEK--GAGGFMPYGFTGVLSGAAtcfFAFIGFDAIATTGEEVKNPQR 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  222 AVSkatLLALVLATVLFIIVVAFAAFATGNVDRFAEGnaTNEAFFTIAGNVGGIWLKVAFSiiVAFVCAVGN-IITAQTA 300
Cdd:TIGR00906 263 AIP---IGIVTSLLVCFVAYFLMSAALTLMMPYYLLD--PDAPFPVAFEYVGWDPAKYIVA--VGALCGMSTsLLGGMFP 335

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446678737  301 VSRVLFSMGRDRMLPAFLAHVHTTRKTPDYAILFTGGVTLLLSYLFsgKIESISTLVNFGALFAFFVVNLCVFIL 375
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLF--DLKALVDLLSIGTLLAYSLVAACVLIL 408
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 18-359 2.97e-13

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 71.32  E-value: 2.97e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   18 VFMVPIAPVSLYGVVynlshGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLldYLL 97
Cdd:TIGR00911  62 IFVSPKGVLKNAGSV-----GLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIEL--LVI 134

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   98 FPTLVAVLGGVAVHAILP------QIPVWVWPLIYVA---IGTGVNYLGIQQTAKFDKLLVFIQLGILAIFVLLIVRLLM 168
Cdd:TIGR00911 135 RPGSQAVNALNFAIYILTpvfpdcEVPEWAIRLVAVLcvlLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLG 214

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  169 LDSSQiTLSFRPFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFIIVvAFAAFA 248
Cdd:TIGR00911 215 KGGVE-SLNPKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLT-NIAYFT 292

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  249 TGNVDRFAEGNAtneafftIAGNVGGIWLKVAFSIIVAFV--CAVGNIITAQTAVSRVLFSMGRDRMLPAFLAHVHTTRK 326
Cdd:TIGR00911 293 VLSPEELLASLA-------VAVDFGERLLGVMSWAMPALVglSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRL 365

                         330       340       350
                  ....*....|....*....|....*....|...
gi 446678737  327 TPDYAILFTGGVTLLlsYLFSGKIESISTLVNF 359
Cdd:TIGR00911 366 TPLPSLLIVCTLTLL--MLFSGDIYSLINLISF 396
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
42-347 2.69e-11

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 65.19  E-value: 2.69e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  42 LVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWV 121
Cdd:COG0833   50 LAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWI 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 122 WPLIYVAIGTGVNYLGIQQTA---------KFDKLLVFIQLGILAIFVLLivrllmldsSQITLSFRPFFDSQWFTPGLI 192
Cdd:COG0833  130 WSLLFLALIFLLNALSVKAFGesefwfsliKVITVIAFIIVGLLMIFGII---------GGHAPGFSNFTTGDGPFPGGF 200

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 193 ATAISV---AALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFIIvvafAAFATGNVDRFAEGNATNEAFFTIA 269
Cdd:COG0833  201 LAILGVmmiVGFSFQGTELIGIAAGESENPEKTIPKAIRQVFWRILLFYIL----AIFVIAALIPYTDAGVAESPFTLVF 276

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 270 GNVGgiwLKVAFSIIvAFVcavgnIITAQT--------AVSRVLFSMGRDRMLPAFLAHVhTTRKTPDYAILFT--GGVT 339
Cdd:COG0833  277 ERAG---IPYAADIM-NAV-----ILTAVLsagnsglyASTRMLWSLAKEGMAPKIFAKL-NKRGVPLNALLATmaVGLL 346


                 ....*...
gi 446678737 340 LLLSYLFS 347
Cdd:COG0833  347 ALLSSFFG 354
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
40-421 4.38e-09

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 58.21  E-value: 4.38e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  40 VALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWIllldYLLFPTLV----AVLGGVAVHAILP 115
Cdd:COG1113   50 VLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYLGPWAGFVTGWL----YWFFWVLVgmaeATAVGIYLQFWFP 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 116 QIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQlgILAIFVLLIVRLLML-----DSSQITLSFRPFFDSQWFTP- 189
Cdd:COG1113  126 DVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIK--VVAIVAFIVVGLLLIffgfgLPGGPPAGLSNLWDHGGFFPn 203

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 190 GL--IATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFI--IVVAFAAFATGNVDrfaegnATNEAF 265
Cdd:COG1113  204 GIggVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIWRILLFYVgsLFVILALVPWNQIG------AGGSPF 277

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 266 FTIAGNVGGIWLKVAFSIIV---AFVCAVGNIITAqtavSRVLFSMGRDRMLPAFLAHVhTTRKTPDYAILFTGGVTLL- 341
Cdd:COG1113  278 VTVFSLLGIPAAAGIMNFVVltaALSSLNSGLYST----SRMLYSLAERGDAPKFFGKL-SKRGVPVRAILLSAVVLLIg 352

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 342 --LSYLFSGKI-ESISTLVNFGALFAFFVVNLCvFILFNFRMKAQR------RIFAHVISPIMGMIVIGYVCLNM----- 407
Cdd:COG1113  353 vvLNYLLPEKAfTFLLSISGFGALFVWLMILVS-QLKFRRRLPREGaaalkfKMPGFPYTSYLTLAFLAAVLVLMafdpd 431

                        410
                 ....*....|....
gi 446678737 408 NIHALILGISWAAI 421
Cdd:COG1113  432 TRIALIVGPVWLAL 445
PRK10249 PRK10249
phenylalanine transporter; Provisional
 40-421 8.89e-08

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 54.22  E-value: 8.89e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  40 VALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPV 119
Cdd:PRK10249  56 VLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPT 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 120 WVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQlgILAIFVLLIVRLLMLDSSQitLSFRPFFDSQWFTPGLIAT----- 194
Cdd:PRK10249 136 WIWAAAFFIIINAVNLVNVRLYGETEFWFALIK--VLAIIGMIGFGLWLLFSGH--GGEKASIDNLWRYGGFFATgwngl 211

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 195 --AISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFI--IVVAFAAFAtgnvdrFAEGNATNEAFFTIAG 270
Cdd:PRK10249 212 ilSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIgsLVVLLALYP------WVEVKSNSSPFVMIFH 285

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 271 NVGGIWLKVAFSIIVaFVCAVGNIITAQTAVSRVLFSMGRDRMLPAFLAHVhTTRKTPDYAILFTGGVT---LLLSYLFS 347
Cdd:PRK10249 286 NLDSNVVASALNFVI-LVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRV-SRRGVPINSLMLSGAITslvVLINYLLP 363

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 348 GKIesistlvnFGALFAFFV----VNLCVFILFNFRMKAQRR------IFAHVISPIMGMIVIGYVCLNMNIHALILGIS 417
Cdd:PRK10249 364 QKA--------FGLLMALVVatllLNWIMICLAHLRFRAAMRrqgretQFKALLYPFGNYLCIAFLGMILLLMCTMDDMR 435


                 ....
gi 446678737 418 WAAI 421
Cdd:PRK10249 436 LSAI 439
PRK11387 PRK11387
S-methylmethionine permease;
42-368 1.57e-07

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 53.32  E-value: 1.57e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  42 LVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWV 121
Cdd:PRK11387  52 LAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWP 131

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 122 WPLIYVAIGTGVNYLGIQQTA---------KFDKLLVFIQLGILAIFVLLIvrllMLDSSQITLsFRPFFDSQWFTPGLI 192
Cdd:PRK11387 132 WCLLFCALIFGLNVVSTRFFAegefwfsliKVVTILAFIVLGGAAIFGFIP----MQDGSPAPG-LRNLTAEGWFPHGGL 206

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 193 ATAISVAALNFL--GFDAISTLSEESEGGGRAVSKATLLALVLATVLFI-IVVAFAAFATgnvdrfAEGNATNEAFFTIA 269
Cdd:PRK11387 207 PILMTMVAVNFAfsGTELIGIAAGETENPAKVIPVAIRTTIARLVIFFVgTVLVLAALIP------MQQAGVEKSPFVLV 280

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 270 GNVGGIWLK---VAFSIIVAFVCAVGniiTAQTAVSRVLFSMGRDRMLPAFLAHVhTTRKTPDYAILFT--GGVTLllsy 344
Cdd:PRK11387 281 FEKVGIPYAadiFNFVILTAILSAAN---SGLYASGRMLWSLSNEGTLPACFARL-TKRGIPLTALSVSmlGGLLA---- 352

                        330       340
                 ....*....|....*....|....
gi 446678737 345 LFSGKIESISTLVNFGALFAFFVV 368
Cdd:PRK11387 353 LFSSVVAPDTVFVALSAISGFAVV 376
PRK10197 PRK10197
GABA permease;
40-217 8.39e-06

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 48.08  E-value: 8.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  40 VALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPV 119
Cdd:PRK10197  27 VLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSWVPGIPI 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 120 WVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQ-LGILAIFVLLIVRLLMLDSSQITLSFRPFFDSQWFTP---GLIATA 195
Cdd:PRK10197 107 WLFSLVITLALTGSNLLSVKNYGEFEFWLALCKvIAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPngfGAVLSA 186

                        170       180
                 ....*....|....*....|..
gi 446678737 196 ISVAALNFLGFDAISTLSEESE 217
Cdd:PRK10197 187 MLITMFSFMGAEIVTIAAAESD 208
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 44-385 1.19e-05

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 47.66  E-value: 1.19e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737   44 YIIGAIAMFFTAYSYSTLSQHISSSGSAYA-YAGVCINPAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVW 122
Cdd:TIGR00913  42 YAIMGSIIYCVMQSLGEMATFYPVVSGSFAtYASRFVDPAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVW 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  123 PLIYVAIGTGVNYLGIQQTAKFDKLLVFIQ-LGILAIFVLLIVRLLMLDSSQITLSFRPFFDSQWFTPGL-------IAT 194
Cdd:TIGR00913 122 IAIFYVFIVIINLFGVKGYGEAEFWFSSIKiLAIIGFIILSIILNCGGGPNHGYIGFRYWHDPGAFAGGTiggrfkgVCS 201

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  195 AISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFIIVVAF----AAFATGNVDRFAEGNATNEAFFTIAG 270
Cdd:TIGR00913 202 VFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYILTLFLigflVPYNDPRLLSSSSSSDSAASPFVIAI 281

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  271 NVGGIwlKVAFSIIVA----FVCAVGNiiTAQTAVSRVLFSMGRDRMLPAFLAHVhTTRKTPDYAILFTgGVTLLLSYLF 346
Cdd:TIGR00913 282 QNHGI--KVLPHIFNAviliSVLSAAN--SSLYASSRTLYALAHQGLAPKIFAYV-DRRGVPYVAVIVS-SLFGLLAFLA 355

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 446678737  347 --SGKIESISTLVNFGALFAFFV---VNLCvFILFNFRMKAQRR 385
Cdd:TIGR00913 356 vsKKEAEVFTWLLNISGLSGFFTwmcICLS-HIRFRKAMKAQGR 398
PRK15049 PRK15049
L-asparagine permease;
40-362 7.34e-05

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 45.00  E-value: 7.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  40 VALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLfpTLVAVLGGVAVH----AILP 115
Cdd:PRK15049  63 LALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAM--TGIVDITAVALYmhywGAFG 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 116 QIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQlgILAIFVLLIVRLLMLDSSQI----TLSFRPFFDSQWFTP-G 190
Cdd:PRK15049 141 GVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIK--VLAIVTFLVVGTVFLGSGQPldgnTTGFHLITDNGGFFPhG 218

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 191 LIATAISVAAL--NFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFIIVVAFAAFATgnvdRFAEGNATNEAFFTI 268
Cdd:PRK15049 219 LLPALVLIQGVvfAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLL----PWSAYQAGQSPFVTF 294

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737 269 AGNVGGIWLKVAFSIIVaFVCAVGNIITAQTAVSRVLFSMGRDRMLPAFLAHVhTTRKTPDYAILFTGGV---TLLLSYL 345
Cdd:PRK15049 295 FSKLGVPYIGSIMNIVV-LTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKM-SRQHVPYAGILATLVVyvvGVFLNYL 372

                        330
                 ....*....|....*..
gi 446678737 346 FSGKIESIstLVNFGAL 362
Cdd:PRK15049 373 VPSRVFEI--VLNFASL 387
proY PRK10580
putative proline-specific permease; Provisional
 40-161 1.09e-03

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 41.34  E-value: 1.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  40 VALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCINPAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPV 119
Cdd:PRK10580  44 VLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPH 123

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 446678737 120 WVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFVL 161
Cdd:PRK10580 124 WIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIV 165
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 200-363 1.81e-03

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 40.50  E-value: 1.81e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  200 ALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVL---FIIVVAFAAFATGNVDRFAEGNATNEAFFTIAGNVGGiw 276
Cdd:TIGR00907 227 AWSMTGYDGTAHMAEEIENPEVVGPRAIIGAVAIGIVTgfcFNIVLFFSMGDIDSLISSTTGQPIAQIFYNALGNKAG-- 304

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446678737  277 lkVAFSIIVAFVCAVGNIITAQTAVSRVLFSMGRDRMLPA--FLAHVHTTRKTPDYAILFTGGVTLLLSYLFSGKIESIS 354
Cdd:TIGR00907 305 --AIFLLCLILVTSFFCAITCMTANSRMIYAFSRDGGLPFspLWSRVNPRTQVPLNAVWLSAVWIILIGLLGLGSSTAFQ 382


                  ....*....
gi 446678737  355 TLVNFGALF 363
Cdd:TIGR00907 383 AIFSVCTVA 391
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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