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Conserved domains on  [gi|446673854|ref|WP_000751200|]
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MULTISPECIES: CHAP domain-containing protein [Staphylococcus]

Protein Classification

CHAP domain-containing protein( domain architecture ID 11467641)

cysteine, histidine-dependent amidohydrolase/peptidase (CHAP) domain-containing protein may function as an amidase involved in the cleavage of peptidoglycan

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
COG3942 COG3942
Surface antigen [Cell wall/membrane/envelope biogenesis];
188-297 9.26e-54

Surface antigen [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 443142 [Multi-domain]  Cd Length: 129  Bit Score: 171.33  E-value: 9.26e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446673854 188 TSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDRHPTRGSILQT---VNGPFGHVAYVEKVNID 264
Cdd:COG3942   15 VDPWNGYPYGQCTWYAAWRRAQLGGPIGSGWGNANNWADNARAAGYTVGSTPKVGAVAVFtpgVAGPYGHVAVVESVNSD 94
                         90       100       110
                 ....*....|....*....|....*....|...
gi 446673854 265 GSILISEMNWIGEYIVSSRTISASEVSSYSYIH 297
Cdd:COG3942   95 GSILVSEMNWGGPGIYSTRTISAGNASSYGFIH 127
 
Name Accession Description Interval E-value
COG3942 COG3942
Surface antigen [Cell wall/membrane/envelope biogenesis];
188-297 9.26e-54

Surface antigen [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443142 [Multi-domain]  Cd Length: 129  Bit Score: 171.33  E-value: 9.26e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446673854 188 TSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDRHPTRGSILQT---VNGPFGHVAYVEKVNID 264
Cdd:COG3942   15 VDPWNGYPYGQCTWYAAWRRAQLGGPIGSGWGNANNWADNARAAGYTVGSTPKVGAVAVFtpgVAGPYGHVAVVESVNSD 94
                         90       100       110
                 ....*....|....*....|....*....|...
gi 446673854 265 GSILISEMNWIGEYIVSSRTISASEVSSYSYIH 297
Cdd:COG3942   95 GSILVSEMNWGGPGIYSTRTISAGNASSYGFIH 127
PRK08581 PRK08581
amidase domain-containing protein;
194-296 1.55e-23

amidase domain-containing protein;


Pssm-ID: 236304 [Multi-domain]  Cd Length: 619  Bit Score: 100.25  E-value: 1.55e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446673854 194 YTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDRHPTRGSIL------QTVNGPFGHVAYVEKVNIDGSI 267
Cdd:PRK08581 508 YPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQARGYQVSHTPKRHAAVvfeagqAGADQHYGHVAFVEKVNSDGSI 587
                         90       100
                 ....*....|....*....|....*....
gi 446673854 268 LISEMNWIGEYIVSSRTISASEVSSYSYI 296
Cdd:PRK08581 588 VISESNVKGLGIISYRTIDAAAAEELSYI 616
CHAP pfam05257
CHAP domain; This domain corresponds to an amidase function. Many of these proteins are ...
190-273 7.91e-19

CHAP domain; This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Swiss:P43675, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.


Pssm-ID: 461605 [Multi-domain]  Cd Length: 83  Bit Score: 79.00  E-value: 7.91e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446673854  190 KNNLYTAGQCTWYVFDKRAKDGHtistFWGDAKNWAGQASsNGFKVDRH-PTRGSILQ----TVNGPFGHVAYVEKVNiD 264
Cdd:pfam05257   1 YGNGYPWGQCTWFVYWRVAQLGI----YLGNAGDWADAAA-GAYKVGSTtPKVGDIVVfdpgGGGASYGHVAIVEKVN-D 74

                  ....*....
gi 446673854  265 GSILISEMN 273
Cdd:pfam05257  75 GSITVSEQN 83
 
Name Accession Description Interval E-value
COG3942 COG3942
Surface antigen [Cell wall/membrane/envelope biogenesis];
188-297 9.26e-54

Surface antigen [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443142 [Multi-domain]  Cd Length: 129  Bit Score: 171.33  E-value: 9.26e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446673854 188 TSKNNLYTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDRHPTRGSILQT---VNGPFGHVAYVEKVNID 264
Cdd:COG3942   15 VDPWNGYPYGQCTWYAAWRRAQLGGPIGSGWGNANNWADNARAAGYTVGSTPKVGAVAVFtpgVAGPYGHVAVVESVNSD 94
                         90       100       110
                 ....*....|....*....|....*....|...
gi 446673854 265 GSILISEMNWIGEYIVSSRTISASEVSSYSYIH 297
Cdd:COG3942   95 GSILVSEMNWGGPGIYSTRTISAGNASSYGFIH 127
PRK08581 PRK08581
amidase domain-containing protein;
194-296 1.55e-23

amidase domain-containing protein;


Pssm-ID: 236304 [Multi-domain]  Cd Length: 619  Bit Score: 100.25  E-value: 1.55e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446673854 194 YTAGQCTWYVFDKRAKDGHTISTFWGDAKNWAGQASSNGFKVDRHPTRGSIL------QTVNGPFGHVAYVEKVNIDGSI 267
Cdd:PRK08581 508 YPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQARGYQVSHTPKRHAAVvfeagqAGADQHYGHVAFVEKVNSDGSI 587
                         90       100
                 ....*....|....*....|....*....
gi 446673854 268 LISEMNWIGEYIVSSRTISASEVSSYSYI 296
Cdd:PRK08581 588 VISESNVKGLGIISYRTIDAAAAEELSYI 616
CHAP pfam05257
CHAP domain; This domain corresponds to an amidase function. Many of these proteins are ...
190-273 7.91e-19

CHAP domain; This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Swiss:P43675, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.


Pssm-ID: 461605 [Multi-domain]  Cd Length: 83  Bit Score: 79.00  E-value: 7.91e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446673854  190 KNNLYTAGQCTWYVFDKRAKDGHtistFWGDAKNWAGQASsNGFKVDRH-PTRGSILQ----TVNGPFGHVAYVEKVNiD 264
Cdd:pfam05257   1 YGNGYPWGQCTWFVYWRVAQLGI----YLGNAGDWADAAA-GAYKVGSTtPKVGDIVVfdpgGGGASYGHVAIVEKVN-D 74

                  ....*....
gi 446673854  265 GSILISEMN 273
Cdd:pfam05257  75 GSITVSEQN 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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