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Conserved domains on  [gi|446662560|ref|WP_000739906|]
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MULTISPECIES: fimbrial biogenesis chaperone BcfB [Salmonella]

Protein Classification

PRK15188 family protein( domain architecture ID 11487685)

PRK15188 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 1-228 6.32e-150

fimbrial chaperone protein BcfB; Provisional


:

Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 416.09  E-value: 6.32e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560   1 MKKNLPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP 80
Cdd:PRK15188   1 MKKNVPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  81 LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR 160
Cdd:PRK15188  81 LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446662560 161 NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS 228
Cdd:PRK15188 161 NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS 228
 
Name Accession Description Interval E-value
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 1-228 6.32e-150

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 416.09  E-value: 6.32e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560   1 MKKNLPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP 80
Cdd:PRK15188   1 MKKNVPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  81 LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR 160
Cdd:PRK15188  81 LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446662560 161 NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS 228
Cdd:PRK15188 161 NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS 228
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
23-224 8.71e-70

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 213.31  E-value: 8.71e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  23 AAQAGGIALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWVANADG-----SRSTDFIITPPLFVIQPKKENILRIMYV 97
Cdd:COG3121   19 AAAAAGISISPTRVIYPAGDKEASLTLTNTG-DTPYLVQSWVDDWDQdagpdKATAPFVVTPPLFRLEPGKSQTVRIIRT 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  98 GPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVS 177
Cdd:COG3121   98 GPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTVTNPGPYYVT 177

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446662560 178 MVELY--SAGKKLP--NTMVPPKGAITLP-------ATPGQVSLRTVNDFGATTPARV 224
Cdd:COG3121  178 LSDLSlgAGGKKLKkgLGMVLPGSTRRWPlpagaslAAGGKVTWATINDYGGAVPLEA 235
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 29-147 9.03e-46

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 148.12  E-value: 9.03e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560   29 IALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWV-----ANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPT 103
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTG-DNPYLVQSWVddgneEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 446662560  104 DRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLA 147
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 1-228 6.32e-150

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 416.09  E-value: 6.32e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560   1 MKKNLPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP 80
Cdd:PRK15188   1 MKKNVPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  81 LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR 160
Cdd:PRK15188  81 LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446662560 161 NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS 228
Cdd:PRK15188 161 NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS 228
PRK15195 PRK15195
molecular chaperone FimC;
26-223 2.78e-80

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 239.76  E-value: 2.78e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  26 AGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPTDR 105
Cdd:PRK15195  24 AGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENTLRIIYAGPPLAADR 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 106 ESVFYLNSKAIPSVDKNKLTG-NSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELYSA 184
Cdd:PRK15195 104 ESLFWMNVKAIPSVDKNALEGrNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVHNPSPYYVTLVNLQVG 183

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 446662560 185 GKKLPNTMVPPKGA--ITLPA-TPGQVSLRTVNDFGATTPAR 223
Cdd:PRK15195 184 SQKLGNAMIAPKVNsqIPLPSgVQGKLKFQTVNDYGAVTPAR 225
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
23-224 8.71e-70

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 213.31  E-value: 8.71e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  23 AAQAGGIALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWVANADG-----SRSTDFIITPPLFVIQPKKENILRIMYV 97
Cdd:COG3121   19 AAAAAGISISPTRVIYPAGDKEASLTLTNTG-DTPYLVQSWVDDWDQdagpdKATAPFVVTPPLFRLEPGKSQTVRIIRT 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  98 GPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVS 177
Cdd:COG3121   98 GPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTVTNPGPYYVT 177

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446662560 178 MVELY--SAGKKLP--NTMVPPKGAITLP-------ATPGQVSLRTVNDFGATTPARV 224
Cdd:COG3121  178 LSDLSlgAGGKKLKkgLGMVLPGSTRRWPlpagaslAAGGKVTWATINDYGGAVPLEA 235
PRK15208 PRK15208
molecular chaperone LpfB;
26-219 1.82e-56

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 179.34  E-value: 1.82e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  26 AGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPTDR 105
Cdd:PRK15208  20 AGGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTPFIITPPLFKLDPTKNNVLRIVNITNTLPQDR 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 106 ESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELYSAG 185
Cdd:PRK15208 100 ESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQIKVENPSAFNLTFNQFYANG 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 446662560 186 KKLPNT-MVPPKGA--ITLPATPGQVS---LRTVNDFGAT 219
Cdd:PRK15208 180 RDIEKAgMVPAKGSlnIELPAGTGKVSevkYNIINDFGTA 219
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 29-147 9.03e-46

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 148.12  E-value: 9.03e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560   29 IALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWV-----ANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPT 103
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTG-DNPYLVQSWVddgneEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 446662560  104 DRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLA 147
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
lfpB PRK15290
fimbrial chaperone;
28-220 2.48e-39

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 135.89  E-value: 2.48e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  28 GIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVA--NADGSRSTDFIITPPLFVIQPKKENILRIMYV-GPSLPTD 104
Cdd:PRK15290  38 GVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDpfNKEDKSKAPFTVIPPVSRLEPSQEKVLRIIHTkGVSLPDD 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 105 RESVFYLNSKAIPSVDKNKLTgNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELYSA 184
Cdd:PRK15290 118 RESVFWLNIKNIPPSASNKAT-NSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRNLIAENPNPIHISVMDVIVD 196

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 446662560 185 GKKLPNTMVPPKGAITLP----ATPGQVSLRTVNDFGATT 220
Cdd:PRK15290 197 GHDVPLNMIRPFETLTLPlpanSAGGQMTWRFINDYGAVS 236
PRK09926 PRK09926
fimbrial chaperone;
22-219 3.28e-36

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 127.91  E-value: 3.28e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  22 FAAQAGgIALGATRVIYPQGSKQTSLPIINSsASNVFLIQSWV----ANAD-GSRSTDFIITPPLFVIQPKKENILRIMY 96
Cdd:PRK09926  21 SSSIAD-IVISGTRIIYKSDQKDVNVRLENK-GNNPLLVQSWLdtgdDNAEpGSIKVPFTATPPVSRIDPKRGQTIKLMY 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  97 VGPS-LPTDRESVFYLNSKAIPSVDKNKLTGNS--LQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQ----LTIT 169
Cdd:PRK09926  99 TASTaLPKDRESVFWFNVLEVPPKPDAEKVANQslLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSEgkasLRVT 178

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446662560 170 NPSPYYVSM--VELYSAGKKLP--NTMVPPKGAITLP-------ATPGQVSLRTVNDFGAT 219
Cdd:PRK09926 179 NPTPYYVSFssGDLEAGGKRYPvdSKMIAPFSDESMKvkglsgkASSGKVHFYAINDFGGA 239
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 24-221 2.28e-34

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 122.58  E-value: 2.28e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  24 AQAGGIALGATRVIYPQGSKQTSLPIINSSasNV-FLIQSW---VANADGSRSTDFIITPPLFVIQPKKENILRIMYVGP 99
Cdd:PRK15299  19 AHAAGINIGTTRVIFHGDAKDASISISNSD--NVpYLIQSWaqsISETGASGDAPFMVTPPLFRLNGGQKNVLRIIRTGG 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 100 SLPTDRESVFYLNSKAIPSVDKNKlTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMV 179
Cdd:PRK15299  97 NLPEDRESLYWLDIKSIPSSNPDN-KHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPTPYYMNFA 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 446662560 180 ELYSAGKKL--PNTMVPPKGA-ITLP-ATPGQVSLRTVNDFGATTP 221
Cdd:PRK15299 176 TLSVGSQKVkaPRYVAPFGNAqYTLPaAASGPIAWSIINDFGGTGP 221
PRK15211 PRK15211
fimbrial chaperone;
31-219 1.54e-33

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 120.31  E-value: 1.54e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  31 LGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWVANAD-GSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPTDRESVF 109
Cdd:PRK15211  26 LNGTRFIYDEGRKNISFEVTNQA-DQTYGGQVWIDNTTqGSSTVYMVPAPPFFKVRPKEKQIIRIMKTDSALPKDRESLF 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 110 YLNSKAIPSVDKNKlTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELYSAGK--K 187
Cdd:PRK15211 105 WLNVQEIPPKPKAS-EGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGETYLKNPTPYYFAVTGVKLNGQpvK 183

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 446662560 188 LPN------TMVPPKGAITL--PATPGQVSLRTVNDFGAT 219
Cdd:PRK15211 184 LSDrvmneiAQLAPFSEVSLgkLSLNGTVTVQAVNDWGGT 223
PRK15295 PRK15295
fimbrial assembly chaperone;
23-217 5.86e-30

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 110.80  E-value: 5.86e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  23 AAQAGgIALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSW--VANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPS 100
Cdd:PRK15295  16 VAHAS-IVVGGTRLVFDGNNDESSINVENKD-SKANLVQSWlsVVDPQVTNKQAFIITPPLFRLDAGQKNSIRVIRSGAP 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 101 LPTDRESVFYLNSKAIPSVDKNKlTGNSLQIATQSVIKLFIRPKNL-AEAPAHAPSTLRCRNERGQLTITNPSPYYVSMV 179
Cdd:PRK15295  94 LPADRESMYWLNIKGIPSIDDNA-SANRVEISINTQIKLIYRPPALtKSTPDSQSQQLKWQTAGDVITVNNPTPYYMNFA 172

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 446662560 180 ELYSAGKKLPN-TMVPPKGAITLPATP-----GQVSLRTVNDFG 217
Cdd:PRK15295 173 SVTLNSHEVKSaTFVPPKSSASFKLGStaaphGTVTWRLISDYG 216
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
24-193 1.21e-27

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 105.17  E-value: 1.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  24 AQAGgIALGATRVIYPQGSKQTSLPIINSSASNvFLIQS-------WVANADGSRSTDFIITPPLFVIQPKKENILRIMY 96
Cdd:PRK15192  20 AQAG-VVIGGTRFIYHAGAPALSVPVSNHSEAS-WLIDThilpggrWPGTKNEGNITPFVVTPPLFMLSARQENSMRVVY 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  97 VGPSLPTDRESVFYLNSKAIPSvdkNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYV 176
Cdd:PRK15192  98 TGAPLPADRESLFTLSIAAIPS---GKPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTPYYV 174

                        170
                 ....*....|....*..
gi 446662560 177 SMVELYSAGKKLPNTMV 193
Cdd:PRK15192 175 TLFLLRANERAQDNAGV 191
PRK15249 PRK15249
fimbrial chaperone;
34-218 9.53e-26

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 100.64  E-value: 9.53e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  34 TRVIYPQGSKQTSLPIINSSASNvFLIQSWVANAD------GSRSTDFIITPPLFVIQPKKENILRIMYVGP-SLPTDRE 106
Cdd:PRK15249  35 SRIIYPSTASSVDVQLKNNDAIP-YIVQTWFDDGDmntspeNSSAMPFIATPPVFRIQPKAGQVVRVIYNNTkKLPQDRE 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 107 SVFYLNSKAIPSVD-KNKLTGNSLQIATQSVIKLFIRPKNLAEaPAHAPSTLR---CRNERGQL--TITNPSPYYVSMVE 180
Cdd:PRK15249 114 SVFWFNVLQVPPTNiGSDSGQNKMLVMLRSRIKLFYRPDGLGK-PDNLAKKLQiktVNKGSGKSgiVIVNPQPWFASLSN 192

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 446662560 181 LY----SAGKKLPNTMVPP--------KGAITLPATPGQVSLRTVNDFGA 218
Cdd:PRK15249 193 LNvkvnGASYNLDADMIAPfssqtwwlPGKRSLKSFSGTVTVTLVNDQGA 242
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 34-218 2.39e-25

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 99.46  E-value: 2.39e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  34 TRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYV---GPSLPTDRESVFY 110
Cdd:PRK15254  23 TRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQVRITQVrglTDKLPQDRETLFW 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 111 LNSKAIPSVDKNKltgNSLQIATQSVIKLFIRPKNLAEAPAHAPS-TLRCRNERGQLTITNPSPYYVSMVEL-------- 181
Cdd:PRK15254 103 FNVRGVPPKPEDD---NVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNAGHLTLRNPTPYYITVAWLgadrshrl 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 446662560 182 --YSAGkklpnTMVPPKGAI----TLPATPGQVSLRTVNDFGA 218
Cdd:PRK15254 180 sgFREG-----VMVPPLGSLplkaVLPAETRTLWVGYIDDYGG 217
PRK11385 PRK11385
fimbrial chaperone;
27-223 6.55e-25

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 97.90  E-value: 6.55e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  27 GGIALGATRVIYPQGSKQTSLPIINSSASNvFLIQS-------WVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGP 99
Cdd:PRK11385  26 AGVVVGGTRFIFPADRESISILLTNTSQES-WLINSkinrptrWAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRTES 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 100 S-LPTDRESVFYLNSKAIPSvdkNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLR-CRNERGqLTITNPSPYYVS 177
Cdd:PRK11385 105 DiLPVDRETLFELSIASVPS---GKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRwTRNSQG-VQLTNPTPYYIN 180

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446662560 178 MVELYSAGKKLPNT-MVPPKG----AITLPATPGQVSLRTVNDFGATTPAR 223
Cdd:PRK11385 181 LIQVSVNGKALSNAgVVPPKSqrqtSWCQAIAPCHVAWRAINDYGGLSAKK 231
PRK15224 PRK15224
pili assembly chaperone PapD;
23-220 1.48e-22

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 91.73  E-value: 1.48e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  23 AAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLP 102
Cdd:PRK15224  24 NTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPI-LVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMP 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 103 TDRESVFYLNSKAIP-----SVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVS 177
Cdd:PRK15224 103 TDRETLQWVCIKAVPpenepSDTQAKGATLDLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMN 182

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 446662560 178 MVELYSAGKKLPN-TMVPPKGAITLP---ATPGQVSLRTVNDFGATT 220
Cdd:PRK15224 183 LASVTVGGKPITGlEYIPPFADKTLNmpgSAHGDIEWRVITDFGGES 229
PRK15233 PRK15233
fimbrial chaperone SefB;
28-218 2.05e-20

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 86.32  E-value: 2.05e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  28 GIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPTDRES 107
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPI-LVQTQVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEES 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 108 VFYLNSKAIP------SVDKNKLTGN-SLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVE 180
Cdd:PRK15233 120 LYWLCVKGVPplndneSNNKNNITTNlNVNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIAN 199

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 446662560 181 LYSAGK--KLPNTMVPPKGAITLP-ATPGQVSLRTVNDFGA 218
Cdd:PRK15233 200 IKSGNLsfNIPNGYIEPFGYAQLPgGVHSKITLTILDDNGA 240
PRK15246 PRK15246
fimbrial assembly chaperone;
34-214 2.28e-20

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 85.78  E-value: 2.28e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  34 TRVIYPQGSKQTSLPIINSSASNVfLIQSWV------ANADGSRsTDFIITPPLFVIQPKKENILRIMYVG-PSLPTDRE 106
Cdd:PRK15246  17 TRIIFASDDVAQSLTLSNDNTTPM-LLQVWTdagnidASPDNSK-TPLVALPPVFKMQPGELRTLRLLLSSrQQLATDRE 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 107 SVFYLNSKAIPSVDKN-KLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELYSAG 185
Cdd:PRK15246  95 SLFWLNIYQIPPVTQDiKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWYMSLTLTMDNK 174

                        170       180
                 ....*....|....*....|....*....
gi 446662560 186 KKLPNTMVPPKGAITLPATPGQVSLRTVN 214
Cdd:PRK15246 175 KSIGDIMVAPKTALDVPLTRSPTPGASIN 203
PRK15285 PRK15285
fimbrial chaperone StfD;
22-221 4.82e-20

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 85.60  E-value: 4.82e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  22 FAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTD-FIITPPLFVIQPKKENILRI--MYVG 98
Cdd:PRK15285  20 YGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSpLIVVPPVQRIEPSAIGQVKIqgMPAL 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  99 PSLPTDRESVFYLNSKAIPSVDKNKltgNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNER--GQLTITNPSPYYV 176
Cdd:PRK15285 100 ASLPQDRETLFYYNVREIPPQSDKP---NTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRqgNGYQVSNPTGYYV 176

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446662560 177 SMVELYSAGKKLPNT-----MVPPKGAITLPATPGQVS----LRTVNDFGATTP 221
Cdd:PRK15285 177 VLSNASNRMDGTPARgfsplVIAPKSNVTLGGDASELGhspvLTYVNDYGARLP 230
PRK15218 PRK15218
fimbrial assembly chaperone;
28-193 1.31e-18

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 81.18  E-value: 1.31e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  28 GIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANADGSRSTD-----FIITPPLFVIQPKKENILRIMYVGPSLP 102
Cdd:PRK15218  19 GIYIYGTRIIYPAQKKDITVQLMNDGKRSS-LIQAWIDNGDTSLPPEklqvpFIMTPPVIRVAANSGQQLKIKKLANNLP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 103 TDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELY 182
Cdd:PRK15218  98 GDRESLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSISVKNNSANWITIPEIK 177

                        170
                 ....*....|.
gi 446662560 183 SAGKKLPNTMV 193
Cdd:PRK15218 178 AKSKVNKETLL 188
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 22-195 2.33e-18

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 80.87  E-value: 2.33e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  22 FAAQAGgIALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWVANADGSRSTD-----FIITPPLFVIQPKKENILRIMY 96
Cdd:PRK15253  29 LPAHAG-IVIYGTRVIYPAEKKEVVVQLVNQG-EQASLVQSWIDDGNTSLPPEkiqvpFMLTPPVARVAAESGQQIKIKK 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  97 VGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYV 176
Cdd:PRK15253 107 MPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIMKNDTANWI 186

                        170       180
                 ....*....|....*....|.
gi 446662560 177 SMVELYSAGKKLPNT--MVPP 195
Cdd:PRK15253 187 TVTDVKAGNTKINDQtiMLPP 207
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 34-202 4.59e-15

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 72.12  E-value: 4.59e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  34 TRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTD-FIITPPLFVIQPKKENILRI--MYVGPSLPTDRESVFY 110
Cdd:PRK15274  33 TRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRyFTALPPLQRIEPKSDGQVKVqpLPAAASLPQDRESLFY 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 111 LNSKAIPSVDKNKltgNSLQIATQSVIKLFIRPKNLAEA--PAHAPSTLRCRNERGQLTI-TNPSPYYVSmveLYSAGKK 187
Cdd:PRK15274 113 FNVREIPPKSDKP---NTLQLALQTRIKFFYRPVAVARQvdKTHPWQTKLTLTYQGDGVIfDNPTPFYLV---ISNAGSK 186

                        170       180
                 ....*....|....*....|..
gi 446662560 188 -------LPNTMVPPKGAITLP 202
Cdd:PRK15274 187 enetasgFKNLLIAPREKVTSP 208
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 168-221 2.21e-10

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 54.58  E-value: 2.21e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446662560  168 ITNPSPYYVSMVELYSAGKK----LPNTMVPPKGAITL-----PATPGQVSLRTVNDFGATTP 221
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGkelaLDPGMVAPFSSQTFaglpaPAAGGTVSYTYINDYGGIVP 63
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 22-228 1.25e-09

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 56.20  E-value: 1.25e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560  22 FAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSwVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSl 101
Cdd:PRK09918  19 SAVHAAGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTT-LVDLPEDKSKLLLVTPPVARVEPGQSQQVRFILKSGS- 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446662560 102 PTDRESVFYLNSKAIPSVDKNKltgNSLQIATQSVIKLFIRPKNLAEAPAhAPSTLRCRNERGQLTITNPSPYYVSMVEL 181
Cdd:PRK09918  97 PLNTEHLLRVSFEGVPPKPGGK---NKVVMPIRQDLPVLIQPAALPVVRD-PWKLLVWSISGNNLVVSNPSPYVVRLGQQ 172

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446662560 182 YsagkklpnTMVPPKGAITLPAT---PGQVSLRTVND-FGATTPARVCPAS 228
Cdd:PRK09918 173 V--------ILLPSGKVVALPKPyilPGESLTVAITNsKATDTKVRFFPAS 215
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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