|
Name |
Accession |
Description |
Interval |
E-value |
| TonB_rec_PqqU |
NF041535 |
TonB-dependent receptor PqqU; |
30-700 |
0e+00 |
|
TonB-dependent receptor PqqU;
Pssm-ID: 469420 [Multi-domain] Cd Length: 673 Bit Score: 1432.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 30 IVSAAPQVVSELDTPAAVSVVDGEEMRLATPRINLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVD 109
Cdd:NF041535 1 VVVAAPPGLSELDTPAAVSVVNGDDMRQAAPQINLSESLGSVPGLQIQNRQNYAQDLQLSIRGFGSRSTYGVRGVRIYVD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 110 GIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGD 189
Cdd:NF041535 81 GIPATMPDGQGQTSNIDLNSVDHVEVLRGPFSALYGNASGGVINVTTQTGSQPPTLEAGSYYGSYGSWRNGVKASGATGD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 190 GTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQ 269
Cdd:NF041535 161 GTHAGDVNYTVSASRFTTHGYRDHSGAQKNLGNAKLGVRIDDVSTLTLLFNSVDIDANDPGGLTESEWRDNPRQAPRADQ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 270 YDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELG-V 348
Cdd:NF041535 241 YNTRKTVKQTQAGLRYQRQMSENDDLSVMTYAGERETTQYQSIPVAPQLNPTHAGGVIDLTRHYQGIDTRWTHRGELGsV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 349 PVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDADVRYSSVWFDSND 428
Cdd:NF041535 321 PVTLTGGLDYETMTEQRKGYENFTLNNGVPELGEKGALRRNERNLMWNLDPYLQTSWQLTDKLTLDAGVRYSTVWFDSND 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 429 HYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLGLKPSTNDTIEIGSKTR 508
Cdd:NF041535 401 HYITAGNGDDSGDASYHKWLPAGSLKYAVTDAWNVYLSAGRGFETPTINELSYRSDGQSGLNFGLKPSTSNTVELGSKTR 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 509 IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCN-EQDCNG 587
Cdd:NF041535 481 IGNGLLTAALFQTDTDNEIVVDSSSGGRTSYKNAGKTRRRGLELGLDQQFAYDWRLKMAWTLLDATYRSNVCGaSQDCNG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 588 NRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEY 667
Cdd:NF041535 561 NRIPGIARNMGYASLGWQPEEGWYAGADVRYMSDIQANDENTAQAPSYTVVGLNTGYKFNWDNWTLDLFGRVDNLFDRRY 640
|
650 660 670
....*....|....*....|....*....|...
gi 446611965 668 VGSVIVNESNGRYYEPSPGRNYGVGMNIAWRFE 700
Cdd:NF041535 641 VGSVIVNESNGRYYEPAPGRNYGVGLTLSYAFE 673
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
8-697 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 581.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 8 QTVLPALLALSPVVFAADE---QTMIVSAAPQVVSEL-DTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYA 83
Cdd:COG4772 2 RRALAAALLLAAAAAAEAAttlETVVVTGSRAAEARLkDVPGSVSVVDREELE-NQAATSLREVLRRVPGVNVQEEDGFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 84 QDLQLSIRGFGSRstyGIRGIRLYVDGIPATMP---DGQGQTSNiDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTG 159
Cdd:COG4772 81 LRPNIGIRGLGPR---RSRGITLLEDGIPIAPApygDPAAYYFP-DLERMERIEVLRGAAALRYGpQTVGGAINFVTRTI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 160 QQPPTIEASSYYGSFGSWRYGLKATGATGDgtqpgdVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIF 239
Cdd:COG4772 157 PTAFGGELRVTGGSFGYRRTHASVGGTVGN------FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 240 NSVDIKADDPGGLTKAEWKANPQQAPR-AEQYDTRktikQTQAGLRYERSLSSRDDMSVMMYAGERETTQYqsIPMAPQl 318
Cdd:COG4772 231 QYYDEDANTPGGLTDAQFDADPRQSYRpADQFDTR----RTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY--IRQNTA- 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 319 NPSHAGGVITL---QRHYQGIDSRWTHRGEL-GVPVTFTTGLNYENMSENRKGYNNFRLNsgmpeyGQKG-ELRRDERNL 393
Cdd:COG4772 304 DPNTPGLGLRGnprGYRSYGIEPRLTHRFELgGVPHTLEVGLRYHREEEDRKQYVNTYGQ------GRSGaGLRRDRRFS 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 394 MWNIDPYLQTQWQLSEKLSLDADVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFET 473
Cdd:COG4772 378 ADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEP 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 474 PTINELSYRadgqSGMNLGLKPSTNDTIEIGSKTRIGDGL-LSLALFQTDTDDEIVVDSSSGG-RTTYKNAGKTRRQGAE 551
Cdd:COG4772 458 PTFGDLAYG----NGGNPDLKPEKSWNYELGTRGRIGNGLsAEVALFYIDYDNELGSCSAAGGdRSTFTNAGETRHQGLE 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 552 LAWDQRFAG----DFRVNASWTWLDATYRSNVCNEQdcNGNRMPGIARNMGFASIGYVPeDGWYAGTEARYMGDIMADDE 627
Cdd:COG4772 534 LALDYDLLKggglGLPLFAAYTYTDAEFTSDFGPVF--AGNRLPYVPRHQLTAGLGYEH-GGWTANLNGRYVSEQFTDAA 610
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446611965 628 NTA------KAPSYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSVIVNESNGryYEPSPGRNYGVGMNIAW 697
Cdd:COG4772 611 NTVadgsfgKIPSYTVLDLSASYDFGKN---LSLFAGVNNLFDKRYIASRAPNYAAG--IRPGPPRTVYAGLRLKF 681
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
47-697 |
1.49e-73 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 250.06 E-value: 1.49e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 47 VSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYAQDlQLSIRGFGSRSTygirgiRLYVDGIPATMPDGQG--QTSN 124
Cdd:cd01347 2 VSVITAEDIE-KQPATSLADLLRRIPGVSVTRGGGGGGS-TISIRGFGPDRT------LVLVDGLPLASSNYGRgvDLNT 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 125 IDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTT 203
Cdd:cd01347 74 IPPELIERVEVLKGPSSALYGSgAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGGFDVSGALADDGAFGARLYGA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 204 RFTTHGY------RDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIK 277
Cdd:cd01347 154 YRDGDGTidgdgqADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 278 QTQAGLRYERSLSSRDDMSVM--MYAGER-ETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSR-WTHRGEL------- 346
Cdd:cd01347 234 YRDRYRKRASLGLEHDLNDTGwtLRANLSySYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTqLGFDAGLnapfgtg 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 347 GVPVTFTTGLNYenmsenRKGYNNFRLNSGmpeygqkgelrrdernlmwnidpYLQTQWQLSEKLSLDADVRYSSVWFDS 426
Cdd:cd01347 314 PVAHTLTLGVEY------RREELDEKQTAL-----------------------YAQDTIELTDDLTLTLGLRYDHYDQDS 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 427 NDHYvtpgNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLG---LKPSTNDTIEI 503
Cdd:cd01347 365 KDTI----AGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGnpnLKPEKSKQYEL 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 504 GSKTRIGDGL-LSLALFQTDTDDEIVVDSSSGGR---TTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSnv 579
Cdd:cd01347 441 GLKYDPGDGLtLSAALFRIDIKNEIVSTPTNTGLglvTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKR-- 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 580 cNEQDCNGNRMPGIARNMGFASIGY-VPEDGWYAGTEARYMGDIMADDE---NTAKAPSYTLVGLFTGYKYNYHnltVDL 655
Cdd:cd01347 519 -TDGATTGNRLPGIPKHTANLGLDYeLPDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKN---LTL 594
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 446611965 656 FGRVDNLFDKEYVGSVIVNESNGRYYePSPGRNYGVGMNIAW 697
Cdd:cd01347 595 RLGVNNLFDKDYYTSLSVRGSGLYGY-YGPGRTYYLSVSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
42-695 |
2.09e-54 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 197.64 E-value: 2.09e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 42 DTPAAVSVVDGEEMRLaTPRINLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGirgiRLYVDGIPATmpdGQGQ 121
Cdd:TIGR01783 1 DIPQSVSVITRQELED-QQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDID----NVYLDGVPLL---SRGN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 122 TSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpGDVDYTV 200
Cdd:TIGR01783 73 LAIVDPAMVERVEVLRGPASLLYGgSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAD---GTFRGRL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 201 STTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPR---AEQYDTRKTIK 277
Cdd:TIGR01783 150 NGARQDGDSFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSdryLGTSSNRNYDD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 278 QTQAGLRYERSLSSRDDMSVMMYAG--ERETTQYQS-----IPMAPQLNPShAGGVITLQRHYQGIdsrWTHRGEL-GVP 349
Cdd:TIGR01783 230 REYLSYGLSLEYQFNDVWTGKQNLRysYFDTDSNQVqasgySSDGGLFGRS-LTVVNVKQDRVQID---AGLDGEFeTGP 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 350 VTFTTGLNYENMSENRKGYNN-FRLNSGMPEYGQKGELRRDERNLM--WNIDPYLQTQWQLSEKLSLDADVRYSS--VWF 424
Cdd:TIGR01783 306 IEHDLLLGVSYGQRTTNRFNNtGYPSDNIYSLTATSSARTDIGDSPkdRALSSTTKALNGVALQRILLADKWTLTlgGRY 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 425 DSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQsgmnlGLKPSTNDTIEIG 504
Cdd:TIGR01783 386 DSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGD-----ILEPEKGKNYELG 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 505 SKTRIGDGLL-SLALFQTDTDDEIVVDSSSGgrTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNvcNEQ 583
Cdd:TIGR01783 461 VRYDLGDSLLaTAALFRITKDNQLVQDPVNG--TFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTED--TNG 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 584 DCNGNRMPGIARNMGFASIGYVPEDGWY---AGTEARYMGDIMADDENTAKAPSYTLVGLFTGYK-YNYHNLTVDLFgrV 659
Cdd:TIGR01783 537 DTQGNTVPFVPKHTASLWASYAPPVGDNgltLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDlTKKKNLTLALN--V 614
|
650 660 670
....*....|....*....|....*....|....*.
gi 446611965 660 DNLFDKEYVGSVIvNESNGRYYEPSPGRNYGVGMNI 695
Cdd:TIGR01783 615 NNLFDRDYYTSGY-RWGPSAYIYPGAPRTVGLSVSY 649
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
226-695 |
4.90e-53 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 190.37 E-value: 4.90e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 226 GVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKT--IKQTQAGLRYERSLSSRDDMSVMMYAGE 303
Cdd:pfam00593 6 LDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYsdTDRKRLSLGYDYDLGDGLSWLSTLRLGL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 304 RETTQYQSIPMAPQLNPShAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQK 383
Cdd:pfam00593 86 RYSSLDGDYTSNSSGLSG-AGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANPSS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 384 GELRRDERNlmwNIDPYLQTQWQLSEKLSLDADVRYSSVWFDSNDHYVTPGNGDDSgdasYHKWLPAGSLKYAMTDAWNI 463
Cdd:pfam00593 165 SSYSDTTTD---SYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRS----YSAFSPRLGLVYKPTDNLSL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 464 YLAAGRGFETPTINELSYRADGQSGM-----NLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGR-- 536
Cdd:pfam00593 238 YASYSRGFRAPSLGELYGSGSGGGGGavaggNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDGPGLgg 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 537 --TTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNeqdcNGNRMPGIARNMGFASIGY-VPEDGWYAG 613
Cdd:pfam00593 318 tvYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADD----TGNPLPNVPRHTANLGLTYdFPLGGWGAR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 614 TEARYMGD---IMADDENTAKAPSYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSVIVNESNGRYYePSPGRNYG 690
Cdd:pfam00593 394 LGARYVGSgerRYGDAANTFKTPGYTLVDLSAGYRLNKN---LTLRLGVNNLFDKYYKRYYSSGGGNLGGY-PGPGRTFY 469
|
....*
gi 446611965 691 VGMNI 695
Cdd:pfam00593 470 LGLSY 474
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
10-696 |
5.10e-23 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 104.09 E-value: 5.10e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 10 VLPALLALSPV----VFAADE-----QTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTSVPGLQVQ--- 77
Cdd:PRK13483 8 VISALCLLPAVfvthALAQAApdktmETVVVTASGYEQQIRDAPASISVITREDLENRFYR-DLTDALLDVPGVVVTggg 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 78 NRQNyaqdlqLSIRGFGSRSTYgirgirlyvdgipaTMPDGQGQTS-----NID-----------LSSVQNVEVLRGPFS 141
Cdd:PRK13483 87 DRTD------ISLRGMGSQYTL--------------ILVDGKRQSSretrpNSDgpgveqawtppLAAIERIEVIRGPMS 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 142 ALYG-NASGGVMNVTTQ------TG--QQPPTIEASS-----YYGSF---GSWRYGLKATGATGDGTQPGDVDytvsttr 204
Cdd:PRK13483 147 SLYGsDAIGGVINIITRkvpnewQGevRLDTTLQENSdsgnvYQANFfvnGPLIKDLLGLQLYGQYTQREEDD------- 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 205 fTTHGYRDHSgaQKNLaNAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRA------EQYDtRKTIKQ 278
Cdd:PRK13483 220 -IEGGYRDKD--ARSL-TAKLALTPNEDHDIMLEVGTSNQERDSTVGKTVAPLAPGESCGRRGcpesstTEYE-RSTVSL 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 279 TQAG----------LRYERSLSSRDDMSVmmyagerETTQYQSIPMAPqLNPSHaggvitlqrhyqgidsrwthrgelgv 348
Cdd:PRK13483 295 SHTGrwdfgtsdtyIQHEEFDNKSREMKI-------KNTDFQSSLVAP-LGQEH-------------------------- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 349 pvTFTTGLNYENMSENRKGYNnfRLNSgmpeygqkgelRRDERNLMWNIdpYLQTQWQLSEKLSLDADVRYssvwfDSND 428
Cdd:PRK13483 341 --TLTFGAAYNHQDLTDETSN--QISD-----------LTDISRTQWAV--FSEDEWRIADDFALTGGLRL-----DHDE 398
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 429 HYvtpgnGDDSGDASYHKWLPAgslkyamtDAWNIYLAAGRGFETPTINELSyrAD-GQ--SGMNL----GLKPSTNDTI 501
Cdd:PRK13483 399 NF-----GGHVSPRVYGVWNLA--------PSWTVKGGVSTGFRAPSLRQTT--PDwGQvsRGGNIygnpDLKPETSLNK 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 502 EIGSKTRIGDGL-LSLALFQTDTDDEI--VV----------DSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASW 568
Cdd:PRK13483 464 ELGLYYDLGSGLtASLTVFYNEFKDKItrVAcpatqctdgpNQFGADPTTYVNIDEAVTQGVEASLSYPITSTLSLSGNY 543
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 569 TWLDATYRSNvcneqDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDE----NTAKAPSYTLVGLFTGY 644
Cdd:PRK13483 544 TYTDSEQKSG-----AYKGSPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQPTTgpssSSFIAPSYTFLDLGANY 618
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 446611965 645 KYNYhnlTVDLFGRVDNLFDKEyvgsviVNESNGRYYEpsPGRNYGVGMNIA 696
Cdd:PRK13483 619 QLTD---NLKLSAGIYNLFDKE------INYEEYGYVE--DGRRYWLGMTYS 659
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TonB_rec_PqqU |
NF041535 |
TonB-dependent receptor PqqU; |
30-700 |
0e+00 |
|
TonB-dependent receptor PqqU;
Pssm-ID: 469420 [Multi-domain] Cd Length: 673 Bit Score: 1432.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 30 IVSAAPQVVSELDTPAAVSVVDGEEMRLATPRINLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVD 109
Cdd:NF041535 1 VVVAAPPGLSELDTPAAVSVVNGDDMRQAAPQINLSESLGSVPGLQIQNRQNYAQDLQLSIRGFGSRSTYGVRGVRIYVD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 110 GIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGD 189
Cdd:NF041535 81 GIPATMPDGQGQTSNIDLNSVDHVEVLRGPFSALYGNASGGVINVTTQTGSQPPTLEAGSYYGSYGSWRNGVKASGATGD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 190 GTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQ 269
Cdd:NF041535 161 GTHAGDVNYTVSASRFTTHGYRDHSGAQKNLGNAKLGVRIDDVSTLTLLFNSVDIDANDPGGLTESEWRDNPRQAPRADQ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 270 YDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELG-V 348
Cdd:NF041535 241 YNTRKTVKQTQAGLRYQRQMSENDDLSVMTYAGERETTQYQSIPVAPQLNPTHAGGVIDLTRHYQGIDTRWTHRGELGsV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 349 PVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDADVRYSSVWFDSND 428
Cdd:NF041535 321 PVTLTGGLDYETMTEQRKGYENFTLNNGVPELGEKGALRRNERNLMWNLDPYLQTSWQLTDKLTLDAGVRYSTVWFDSND 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 429 HYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLGLKPSTNDTIEIGSKTR 508
Cdd:NF041535 401 HYITAGNGDDSGDASYHKWLPAGSLKYAVTDAWNVYLSAGRGFETPTINELSYRSDGQSGLNFGLKPSTSNTVELGSKTR 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 509 IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCN-EQDCNG 587
Cdd:NF041535 481 IGNGLLTAALFQTDTDNEIVVDSSSGGRTSYKNAGKTRRRGLELGLDQQFAYDWRLKMAWTLLDATYRSNVCGaSQDCNG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 588 NRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEY 667
Cdd:NF041535 561 NRIPGIARNMGYASLGWQPEEGWYAGADVRYMSDIQANDENTAQAPSYTVVGLNTGYKFNWDNWTLDLFGRVDNLFDRRY 640
|
650 660 670
....*....|....*....|....*....|...
gi 446611965 668 VGSVIVNESNGRYYEPSPGRNYGVGMNIAWRFE 700
Cdd:NF041535 641 VGSVIVNESNGRYYEPAPGRNYGVGLTLSYAFE 673
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
8-697 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 581.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 8 QTVLPALLALSPVVFAADE---QTMIVSAAPQVVSEL-DTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYA 83
Cdd:COG4772 2 RRALAAALLLAAAAAAEAAttlETVVVTGSRAAEARLkDVPGSVSVVDREELE-NQAATSLREVLRRVPGVNVQEEDGFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 84 QDLQLSIRGFGSRstyGIRGIRLYVDGIPATMP---DGQGQTSNiDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTG 159
Cdd:COG4772 81 LRPNIGIRGLGPR---RSRGITLLEDGIPIAPApygDPAAYYFP-DLERMERIEVLRGAAALRYGpQTVGGAINFVTRTI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 160 QQPPTIEASSYYGSFGSWRYGLKATGATGDgtqpgdVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIF 239
Cdd:COG4772 157 PTAFGGELRVTGGSFGYRRTHASVGGTVGN------FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 240 NSVDIKADDPGGLTKAEWKANPQQAPR-AEQYDTRktikQTQAGLRYERSLSSRDDMSVMMYAGERETTQYqsIPMAPQl 318
Cdd:COG4772 231 QYYDEDANTPGGLTDAQFDADPRQSYRpADQFDTR----RTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY--IRQNTA- 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 319 NPSHAGGVITL---QRHYQGIDSRWTHRGEL-GVPVTFTTGLNYENMSENRKGYNNFRLNsgmpeyGQKG-ELRRDERNL 393
Cdd:COG4772 304 DPNTPGLGLRGnprGYRSYGIEPRLTHRFELgGVPHTLEVGLRYHREEEDRKQYVNTYGQ------GRSGaGLRRDRRFS 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 394 MWNIDPYLQTQWQLSEKLSLDADVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFET 473
Cdd:COG4772 378 ADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEP 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 474 PTINELSYRadgqSGMNLGLKPSTNDTIEIGSKTRIGDGL-LSLALFQTDTDDEIVVDSSSGG-RTTYKNAGKTRRQGAE 551
Cdd:COG4772 458 PTFGDLAYG----NGGNPDLKPEKSWNYELGTRGRIGNGLsAEVALFYIDYDNELGSCSAAGGdRSTFTNAGETRHQGLE 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 552 LAWDQRFAG----DFRVNASWTWLDATYRSNVCNEQdcNGNRMPGIARNMGFASIGYVPeDGWYAGTEARYMGDIMADDE 627
Cdd:COG4772 534 LALDYDLLKggglGLPLFAAYTYTDAEFTSDFGPVF--AGNRLPYVPRHQLTAGLGYEH-GGWTANLNGRYVSEQFTDAA 610
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446611965 628 NTA------KAPSYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSVIVNESNGryYEPSPGRNYGVGMNIAW 697
Cdd:COG4772 611 NTVadgsfgKIPSYTVLDLSASYDFGKN---LSLFAGVNNLFDKRYIASRAPNYAAG--IRPGPPRTVYAGLRLKF 681
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
27-681 |
9.92e-135 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 411.14 E-value: 9.92e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 27 QTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYAQdlQLSIRGFGSrstyGIRGIRL 106
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLE-DQPATDLGDLLRRVPGVSVTSAGGGAG--QISIRGFGG----GGNRVLV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 107 YVDGIPATMPD-GQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKAT 184
Cdd:COG1629 75 LVDGVPLNDPSgGDGGLSYIDPEDIERVEVLRGPSSALYGsGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 185 GATGDgtqpgdVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWK---ANP 261
Cdd:COG1629 155 GGNGK------LAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRprgAMD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 262 QQAPRAEQYDTRKTIKQTQAGLRYERSLssrDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWT 341
Cdd:COG1629 229 DGTNPYSNDTDDNTRDRYSLSLEYEHLG---DGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTYGLELRLT 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 342 HRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQkgelRRDERNLMWNIDPYLQTQWQLSEKLSLDADVRYSS 421
Cdd:COG1629 306 YDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTS----GADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDY 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 422 VWFDSNDhyVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYR-ADGQSGMNLGLKPSTNDT 500
Cdd:COG1629 382 VSYDVDD--TVTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANgTDPYSVGNPDLKPETSTN 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 501 IEIGSKTRIGDG--LLSLALFQTDTDDEIVVD---SSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATY 575
Cdd:COG1629 460 YELGLRYRLLDGrlSLSLALFYSDVDNEILSVplpNDSGFSTYYTNAGKARSYGVELELSYQLTPGLSLNASYSYTDAKF 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 576 RSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDENTAKAP-SYTLVGLFTGYKYNYHnltVD 654
Cdd:COG1629 540 DDDTDGSADLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANTQGAPgGYTLVDLGAGYRFGDN---LT 616
|
650 660
....*....|....*....|....*..
gi 446611965 655 LFGRVDNLFDKEYVGSVIVNESNGRYY 681
Cdd:COG1629 617 LSLGVDNLFDKKYATSLSVRASNVRGF 643
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
41-697 |
3.67e-81 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 270.60 E-value: 3.67e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 41 LDTPAAVSVVDGEEM--RLATpriNLSESLTSVPGLQVQNRQNYAQDlQLSIRGFGSRSTYgirgirlYVDGIPatmpdg 118
Cdd:COG4774 7 LDTPQSVTVVTRELIedQGAT---SLADALRNVPGVTFGAGEGGNGD-SFSIRGFSASGDI-------YVDGLR------ 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 119 QGQTSNIDLSSVQNVEVLRGPFSALYGNAS-GGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDgtqpgDVD 197
Cdd:COG4774 70 DPGQYRRDTFNLERVEVLKGPASVLYGRGSpGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGD-----DLA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 198 YTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTkAEWKANPQQAPRAEQY---DTRK 274
Cdd:COG4774 145 YRLNGMYRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVP-AVANGRPVDVDRSTFYgqpDDYS 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 275 TIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQlnpshAGGVITLQRHYQGIDSR-WTHRGEL------- 346
Cdd:COG4774 224 DSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGN-----ATGTVTRSAYRRDQDNDtLSNQTDLtgkfdtg 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 347 GVPVTFTTGLNYENMSENRKGYNNFR----LNSGMPEYGQKGE----LRRDERNLMWNIDPYLQTQWQLSEKLSLDADVR 418
Cdd:COG4774 299 GVKHTLLAGVEYSREDSDNARYSGGGtaptVNLYNPVYGAPVTgptlGGADNDSRTDTTGLYLQDTISLTDRWSLLAGLR 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 419 YSSVWFDSNDHyvtpGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFeTPTINELSYRADGQSgmnlgLKPSTN 498
Cdd:COG4774 379 YDRFDTDYTDR----TTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSF-NPGGGAPSLSNAGQA-----LDPEKS 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 499 DTIEIGSKTRIGDG--LLSLALFQTDTDDEIVVDSSSGGrtTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYR 576
Cdd:COG4774 449 RQYEVGVKWDLLDGrlSLTAALFRIEKTNVRTTDPANPG--VYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEIT 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 577 SNvcNEQDCNGNRMPGIARNMGFASIGY-VPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNyHNLTVDL 655
Cdd:COG4774 527 KS--ANAANVGNRLPNVPRHSASLWTTYdLPLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN-KNLTLRL 603
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 446611965 656 fgRVDNLFDKEYVGSVIvneSNGRYYePSPGRNYGVGMNIAW 697
Cdd:COG4774 604 --NVNNLTDKRYYASAY---GSGYVT-PGAPRTVLLSASYRF 639
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
23-649 |
2.59e-80 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 267.49 E-value: 2.59e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 23 AADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTygir 102
Cdd:COG4771 24 ATELEEVVVTATRTEQSLSDAPASVSVITAEEIE-KLGATDLADALRLLPGVSVTRSGGRGGSSGISIRGLGGDRV---- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 103 giRLYVDGIP--ATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRY 179
Cdd:COG4771 99 --LVLIDGVPvnNPALGGGGDLSYIPPDDIERIEVIRGPASALYGsDAIGGVINIITKKPTDELEGSVSLGYGSNGNGTY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 180 GLKATGATGDGtqpgDVDYTVSTTRFTTHGYRDH--------SGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGG 251
Cdd:COG4771 177 SGSLSLGGPGD----KLSFLLSGSYRDRDGYLDYrnggfvgnSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 252 LtkaewkANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSsrDDMSVMMYAGERETTQYQSIPMAPQLNPShaggviTLQR 331
Cdd:COG4771 253 T------LGDTEISSDNAGDRDTTTDRGNYSLRYNGDLG--DNLDLSLYYSRTDRDSTNGSLGGSTGSFS------DSDD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 332 HYQGIDSRWTHRgeLGVPVTFTTGLNYenmsenrkgyNNFRLNSGMPEYGQKGELRrdernlmwNIDPYLQTQWQLSEKL 411
Cdd:COG4771 319 TTYGLELDLTYP--LGGNHTLTLGAEY----------RYDDLDSSSFLGGADASRD--------TYGLFAQDEWKLTDKL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 412 SLDADVRYssvwfdsnDHYvtpgngDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGM-- 489
Cdd:COG4771 379 TLTAGLRY--------DYY------STFGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRyv 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 490 --NLGLKPSTNDTIEIGSKTRIGDG--LLSLALFQTDTDDEIV---VDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDF 562
Cdd:COG4771 445 lgNPDLKPETSDNYELGLEYRLGNGglSLSLTGFYTDIKDLIVlvpVGPGPGDVLQYENVGKARTYGLELELKYRLGKGL 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 563 RVNASWTWLDATYrsnvcnEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMAD---DENTAKAPSYTLVG 639
Cdd:COG4771 525 TLTASYTYLDSKI------DDGDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTppsGRLEGYTPGYTLLD 598
|
650
....*....|
gi 446611965 640 LFTGYKYNYH 649
Cdd:COG4771 599 LRASYKLTKN 608
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
47-697 |
1.49e-73 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 250.06 E-value: 1.49e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 47 VSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYAQDlQLSIRGFGSRSTygirgiRLYVDGIPATMPDGQG--QTSN 124
Cdd:cd01347 2 VSVITAEDIE-KQPATSLADLLRRIPGVSVTRGGGGGGS-TISIRGFGPDRT------LVLVDGLPLASSNYGRgvDLNT 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 125 IDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTT 203
Cdd:cd01347 74 IPPELIERVEVLKGPSSALYGSgAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGGFDVSGALADDGAFGARLYGA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 204 RFTTHGY------RDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIK 277
Cdd:cd01347 154 YRDGDGTidgdgqADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 278 QTQAGLRYERSLSSRDDMSVM--MYAGER-ETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSR-WTHRGEL------- 346
Cdd:cd01347 234 YRDRYRKRASLGLEHDLNDTGwtLRANLSySYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTqLGFDAGLnapfgtg 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 347 GVPVTFTTGLNYenmsenRKGYNNFRLNSGmpeygqkgelrrdernlmwnidpYLQTQWQLSEKLSLDADVRYSSVWFDS 426
Cdd:cd01347 314 PVAHTLTLGVEY------RREELDEKQTAL-----------------------YAQDTIELTDDLTLTLGLRYDHYDQDS 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 427 NDHYvtpgNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLG---LKPSTNDTIEI 503
Cdd:cd01347 365 KDTI----AGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGnpnLKPEKSKQYEL 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 504 GSKTRIGDGL-LSLALFQTDTDDEIVVDSSSGGR---TTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSnv 579
Cdd:cd01347 441 GLKYDPGDGLtLSAALFRIDIKNEIVSTPTNTGLglvTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKR-- 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 580 cNEQDCNGNRMPGIARNMGFASIGY-VPEDGWYAGTEARYMGDIMADDE---NTAKAPSYTLVGLFTGYKYNYHnltVDL 655
Cdd:cd01347 519 -TDGATTGNRLPGIPKHTANLGLDYeLPDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKN---LTL 594
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 446611965 656 FGRVDNLFDKEYVGSVIVNESNGRYYePSPGRNYGVGMNIAW 697
Cdd:cd01347 595 RLGVNNLFDKDYYTSLSVRGSGLYGY-YGPGRTYYLSVSYKF 635
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
41-699 |
1.79e-68 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 237.49 E-value: 1.79e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 41 LDTPAAVSVVDGEEM--RLATpriNLSESLTSVPGLQVQNRQNYAQDlQLSIRGFGSRSTYgirgirlyVDGipatMPDG 118
Cdd:COG4773 63 RETPQSVSVVTRQLIedQGAT---TLDDALRNVPGVTVSSYDGGGRD-SFSIRGFSIDNYL--------RDG----LPLG 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 119 QGQTSNIDLSSVQNVEVLRGPFSALYGNAS-GGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpGDVD 197
Cdd:COG4773 127 GFGGGQPDTANLERVEVLKGPAGLLYGAGSpGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNED---GTLR 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 198 YTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEwkANPQQAPR----AEQYDTR 273
Cdd:COG4773 204 YRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFLPLD--GTLLDLPRstnlGEPWDYY 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 274 KTiKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMApqlNPSHAGGVITLQ-------RHYQGIDSRWTHRGEL 346
Cdd:COG4773 282 DT-ETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYG---APDAATGTLTRYasardgdSRSDSLDANLNGKFET 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 347 GvPV--TFTTGLNYENMSENRKGYNNFRLNSGMPEYGQ-----KGELRRDERNLMWNIdpYLQTQWQLSEKLSLDADVRY 419
Cdd:COG4773 358 G-GLehTLLVGADYSRYDSDSDSATAGTINIYNPVYGNlpepdFDASDTDTTTRQTGL--YAQDQISLTDRLSLLLGGRY 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 420 SsvWFDSNDHYvtpGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTinelSYRADGQSgmnlgLKPSTND 499
Cdd:COG4773 435 D--WYETDSTN---RLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQS----GADNNGNP-----LDPETGK 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 500 TIEIGSKTRIGDG--LLSLALFQTDTDDEIVVDSssGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRS 577
Cdd:COG4773 501 QYEAGVKGELFDGrlNATLAVFDITQKNVATTDP--DNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITK 578
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 578 NVCNEQdcnGNRMPGIARNMG--FAS--IGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNyHNLTV 653
Cdd:COG4773 579 DADALE---GKRLTNVPRHTAslWTTyrFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLG-KNWTL 654
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 446611965 654 DLfgRVDNLFDKEYVGSVivneSNGRYYEPSPGRNYGVgmNIAWRF 699
Cdd:COG4773 655 QL--NVNNLFDKKYYASS----GSRGYVYYGAPRNVRL--SLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
42-695 |
2.09e-54 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 197.64 E-value: 2.09e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 42 DTPAAVSVVDGEEMRLaTPRINLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGirgiRLYVDGIPATmpdGQGQ 121
Cdd:TIGR01783 1 DIPQSVSVITRQELED-QQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDID----NVYLDGVPLL---SRGN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 122 TSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpGDVDYTV 200
Cdd:TIGR01783 73 LAIVDPAMVERVEVLRGPASLLYGgSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAD---GTFRGRL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 201 STTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPR---AEQYDTRKTIK 277
Cdd:TIGR01783 150 NGARQDGDSFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSdryLGTSSNRNYDD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 278 QTQAGLRYERSLSSRDDMSVMMYAG--ERETTQYQS-----IPMAPQLNPShAGGVITLQRHYQGIdsrWTHRGEL-GVP 349
Cdd:TIGR01783 230 REYLSYGLSLEYQFNDVWTGKQNLRysYFDTDSNQVqasgySSDGGLFGRS-LTVVNVKQDRVQID---AGLDGEFeTGP 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 350 VTFTTGLNYENMSENRKGYNN-FRLNSGMPEYGQKGELRRDERNLM--WNIDPYLQTQWQLSEKLSLDADVRYSS--VWF 424
Cdd:TIGR01783 306 IEHDLLLGVSYGQRTTNRFNNtGYPSDNIYSLTATSSARTDIGDSPkdRALSSTTKALNGVALQRILLADKWTLTlgGRY 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 425 DSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQsgmnlGLKPSTNDTIEIG 504
Cdd:TIGR01783 386 DSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGD-----ILEPEKGKNYELG 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 505 SKTRIGDGLL-SLALFQTDTDDEIVVDSSSGgrTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNvcNEQ 583
Cdd:TIGR01783 461 VRYDLGDSLLaTAALFRITKDNQLVQDPVNG--TFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTED--TNG 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 584 DCNGNRMPGIARNMGFASIGYVPEDGWY---AGTEARYMGDIMADDENTAKAPSYTLVGLFTGYK-YNYHNLTVDLFgrV 659
Cdd:TIGR01783 537 DTQGNTVPFVPKHTASLWASYAPPVGDNgltLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDlTKKKNLTLALN--V 614
|
650 660 670
....*....|....*....|....*....|....*.
gi 446611965 660 DNLFDKEYVGSVIvNESNGRYYEPSPGRNYGVGMNI 695
Cdd:TIGR01783 615 NNLFDRDYYTSGY-RWGPSAYIYPGAPRTVGLSVSY 649
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
226-695 |
4.90e-53 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 190.37 E-value: 4.90e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 226 GVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKT--IKQTQAGLRYERSLSSRDDMSVMMYAGE 303
Cdd:pfam00593 6 LDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYsdTDRKRLSLGYDYDLGDGLSWLSTLRLGL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 304 RETTQYQSIPMAPQLNPShAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQK 383
Cdd:pfam00593 86 RYSSLDGDYTSNSSGLSG-AGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANPSS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 384 GELRRDERNlmwNIDPYLQTQWQLSEKLSLDADVRYSSVWFDSNDHYVTPGNGDDSgdasYHKWLPAGSLKYAMTDAWNI 463
Cdd:pfam00593 165 SSYSDTTTD---SYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRS----YSAFSPRLGLVYKPTDNLSL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 464 YLAAGRGFETPTINELSYRADGQSGM-----NLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGR-- 536
Cdd:pfam00593 238 YASYSRGFRAPSLGELYGSGSGGGGGavaggNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDGPGLgg 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 537 --TTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNeqdcNGNRMPGIARNMGFASIGY-VPEDGWYAG 613
Cdd:pfam00593 318 tvYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADD----TGNPLPNVPRHTANLGLTYdFPLGGWGAR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 614 TEARYMGD---IMADDENTAKAPSYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSVIVNESNGRYYePSPGRNYG 690
Cdd:pfam00593 394 LGARYVGSgerRYGDAANTFKTPGYTLVDLSAGYRLNKN---LTLRLGVNNLFDKYYKRYYSSGGGNLGGY-PGPGRTFY 469
|
....*
gi 446611965 691 VGMNI 695
Cdd:pfam00593 470 LGLSY 474
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
27-697 |
3.93e-44 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 169.13 E-value: 3.93e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 27 QTMIVSAA----PQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTSVPGLQVQNRQnyaqdlqlsiRGFGSrsTYGIR 102
Cdd:TIGR01786 1 DTITVTATrtadPQRRDLSVTPASVSVISREQLKSQQVR-NLRDLLRYEPGVSVVEGG----------RGGSQ--GINIR 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 103 G-----IRLYVDGIP-ATMPDGQGQTS----NIDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTqtgqqpptIEASSYY 171
Cdd:TIGR01786 68 GldknrVAVLVDGIRqNTSYGGQGSTFyainSIDPELIKSIEIVKGASSSLYGSgALGGVVAFRT--------KDAADLL 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 172 GSFGSWRYGLKATGATGDGT---------QPGDVDYTVSTTRFTTHGYRDHSGAQKNLAN----------------AKLG 226
Cdd:TIGR01786 140 KPGKDLGGLSKLGYSSANNRftqsvaaagRNDDVDALVQATYRRGHELKNGNKANIGNESkrskpnpsdyksqsflAKLG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 227 VRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYD-TRKTIKQTQAGLRYE-RSLSSRDDMSVMMYAGER 304
Cdd:TIGR01786 220 WQLNDAHRLGLSLEYTQTDYDEPEMTNTSYLTKPLGAPLLSSTVVlGDSKTRDRRTGLDYElNPDNSWLDTVKLALDKQY 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 305 -ETTQYQSIPMAPQLNPSHAGGVITLQRHYQ--GIDSR-WTHRGELGVPVTFTTGLNYENMSENRkGYNNFRlNSGMPEY 380
Cdd:TIGR01786 300 iQLYNYLNATSASDYPGVDKNGRYKDKYDYYtlGFDTNnKIEFSVHSLSLTYGLDRFKDKVSTGD-SRRNLP-TAAYNLY 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 381 GQKGELRRDERNlmwNIDPYLQTQWQLSEKLSLDADVRYssvwfdsnDHYVTPGNGDDSGDA-----SYHKWLPAGSLKY 455
Cdd:TIGR01786 378 GYEGENRPVKGS---NFGLFLQDNIKLGDWLSLSAGLRY--------DHYKTDPKADESKDYgaiskTYSRWSPSLGLTY 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 456 AMTDAWNIYLAAGRGFETPTINEL--SYRADGQSGM----NLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEI-- 527
Cdd:TIGR01786 447 KPTPWLTLYYSYSQGFRAPSFDELygTGAHPGGGPYtflpNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIdl 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 528 ---------VVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVcneQDCNGNR-MPGIARNM 597
Cdd:TIGR01786 527 gigvtakgnMAQVGSNTITNYVNIDNARIRGIELSGRYDLGSFFSGPDGWTTTLKYGYTKG---KDSDTNPwLNAITPLK 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 598 GFASIGY-VPEDGWYAGTEARYMGDIMADDENT-------------AKAPSYTLVGLFTGYKYNyHNLTVDlFGrVDNLF 663
Cdd:TIGR01786 604 VVLGLGYdHPDEKWGVGLTLTFSGAKDAVDAYAtyyengeaakagpLRTPSYTVVDLYGYYKPN-KNLTLR-FG-VYNLL 680
|
730 740 750
....*....|....*....|....*....|....*
gi 446611965 664 DKEYVGSVIVNESNGR-YYEPSPGRNYGVGMNIAW 697
Cdd:TIGR01786 681 DRKYTTWESARQAGPLaTGYTAPGRNYKASVEYKF 715
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
27-697 |
9.09e-43 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 164.49 E-value: 9.09e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 27 QTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTSVPGLQVQNRQNyAQDLQLSIRGF-GSRstygirgIR 105
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQAN-NLADALNTVPGVDVTGGGR-PPGQSINIRGLqDNR-------VL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 106 LYVDGIPATMPDGQGQ--TSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTT-------QTGQQpPTIEASSYYGSFG 175
Cdd:TIGR01785 73 VVVDGARQNYQRGGAHngSLFVDPELLKRIEIVKGPSSSLYGsGALGGVVAFRTkdaadllRPGQL-FGGLAKLSYGSNN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 176 SwRYGLKATGAtgdGTQPGDVDYTVSTTRFTTHGYRDHSG--------AQKNLAnAKLGVRIDEASKLSLifnsvdikad 247
Cdd:TIGR01785 152 N-SFGGSVAVA---GRLDDNLDALVAATYRDGGNYRNGNKeeatnsayVQKNLL-AKLGWQLDDAQRLEF---------- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 248 dpgGLTKAEWKANPQQ--APRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGG 325
Cdd:TIGR01785 217 ---SYFTTEGSLDEAQnsGPGTEYVLGSSSTLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDNDRSARGVGR 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 326 VITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMsENRKGynNFRLNSGMPEYGqkgelrrdernlmwNIDPYLQTQW 405
Cdd:TIGR01785 294 EEGYQYTTYGATLQNTSRFDVASWSTLTYGVDWMKD-KRRTE--SFDPNSVTTIVP--------------NPPSAKEYFF 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 406 QL---------SEKLSLDADVRYssvwfdsnDHYVT-PGNGDDSGDASYH--KWLPAGSLKYAMTDAWNIYLAAGRGFET 473
Cdd:TIGR01785 357 GLflqdnipllDDRLTLSAGLRY--------DHYKLsPKTTADTEAVDRSysRWSPSLGLSYKPVDWLTLYASYSQGFRA 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 474 PTINEL--SYRADGQSGM-----NLGLKPSTNDTIEIGSKTRIGDGLLS-------LALFQTDTDDEIV--------VDS 531
Cdd:TIGR01785 429 PSIDELygTGDHPGTPGGytfapNPNLKPETSKTWELGANLSFDNLLLDndqlqfkVAYFYNDVKDFIDltigvtdnVTA 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 532 SSGGRTTYKNAGKTRRQGAELAWDQRFaGDFRVNASWTWLDAtyrsnvcneQDCNgnrmpgiaRNMGFASIG-------- 603
Cdd:TIGR01785 509 GMNNITQYVNIDGARIRGIEASASYDA-GLWATGLSYGYTIG---------KDQN--------TNQWLSNIPplklvvtv 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 604 --YVPEDGWYAGTEARY-------MGDIMADDENTAKAPSYTLVGLFTGYKYN-YHNLTVDLfgRVDNLFDKEYVgsviv 673
Cdd:TIGR01785 571 gyRFPDRRLDLGAKAAYyerqsesPTTEDVAANGLLTTPGYTVVDLYATYQPNaVKGLTVRF--GVNNLTDRKYT----- 643
|
730 740
....*....|....*....|....
gi 446611965 674 nESNGrYYEPSPGRNYGVGMNIAW 697
Cdd:TIGR01785 644 -PAQS-VPGAGPGRNFKGSVKYQF 665
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
29-309 |
5.67e-36 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 136.93 E-value: 5.67e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 29 MIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTygirgiRLYV 108
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELE-RSGATSLADALRRVPGVQVSSSGGPGSAASISIRGLGSNQT------LVLI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 109 DGIPATMP-DGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGA 186
Cdd:COG4206 74 DGVPLNDPsLGGVDLSLIPPDDIERIEVLKGAASALYGsDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 187 TGDGtqpgdvDYTVSTTRFTTHGYR-------DHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWkA 259
Cdd:COG4206 154 AGKF------SYSLSASYRRSDGYRyndpdlrNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRN-L 226
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 446611965 260 NPQQAPRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQY 309
Cdd:COG4206 227 RLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLSY 276
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
7-689 |
2.90e-30 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 126.52 E-value: 2.90e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 7 RQTVLPAL-LALSPVVF-----AADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTSVPGLQVQNRQ 80
Cdd:TIGR01779 3 KSALAPALaSLLTLCSAlhaneAQPLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAK-SLPELLRRLPGVSIAQNG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 81 NYAQDLQLSIRGFGSRStygirgIRLYVDGIP-ATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTQT 158
Cdd:TIGR01779 82 GRGQNTSLFLRGTESDH------VLVLIDGIRfGSAAAGAADFQQLPVELVERIEYVRGPRSSLYGSeAIGGVINIITRR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 159 GQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQ---PGDVDYT--VSTTRFTTHGYR-DHSGAQKNLANAKLGVRIDEA 232
Cdd:TIGR01779 156 RSGGQGTTLSAGLGSLDYQEYSIASGVAIGENGWysvALGTESTkgINVRPGGPGVYDpDRDGFRSDSLLLGGGHRFDES 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 233 SKLSLIF----NSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQagLRYERSLSSRDDMSVMMYAGERETTQ 308
Cdd:TIGR01779 236 WSLFVNAlryeNRNDYDNYSFGTRLYKEAEKGDQSFTGGRQRQSERDVSELT--LSTGKSKDWDYAYSKGRYSSTSDTRE 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 309 YQSIpmapqlnpshaggvitlqrhyqgidsRWTHRGELGVPVTFTTGLNYENmsenrkgynnfrlNSGMPEYGQKGElrr 388
Cdd:TIGR01779 314 QRNI--------------------------QWQNDLLVGDGWVLAGGVDWQK-------------DSIISSTADKED--- 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 389 DERNLMWnidpYLQTQWQLSEKlSLDADVRyssvwFDSNDHYvtpgNGDDSGDAsyhkwlpagSLKYAMTDAWNIYLAAG 468
Cdd:TIGR01779 352 DRSNTAA----FAQVLQQWGQQ-LLEASLR-----RDDNQQF----GSHTTGSI---------AWGYQFIEELRFTASYG 408
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 469 RGFETPTINELSYRADGqsgmNLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRttYKNAGKTRRQ 548
Cdd:TIGR01779 409 TAFKAPNLNQLYYPSYG----NPNLQPETSKSAELGFYGLFSGGKWSISGYRTKINDLIDYDSHPKGY--PNNIGEARIK 482
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 549 GAELAWDQRFAGdFRVNASWTWLDAtyrsnvcneQDCN-GNRMPGIARNMGFASIGYVPED-GW---YAGTEARYMGDIM 623
Cdd:TIGR01779 483 GVEATAEFATGG-WTHQLSVDLLDA---------QNVNtGNTLPRRARQMYKWNADRAFEQfDWgasYQYVGKRYDDDYN 552
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446611965 624 ADDENTAKAPSYTLVGLFTGYKYNYHnLTVDlfGRVDNLFDKEYVGSvivnesngrYYEPSPGRNY 689
Cdd:TIGR01779 553 TYPTQNVRLGGYSLLDLRVSYYVTDS-WTVQ--GRIANLFDKDYETA---------YGYPQAGRAY 606
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
42-151 |
3.66e-23 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 94.64 E-value: 3.66e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 42 DTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYAQDlQLSIRGFGSRSTygirgiRLYVDGIPATMP-DGQG 120
Cdd:pfam07715 4 DTPGSVSVVTAEDIE-DQGATNLADALRGVPGVSVSSGGGGGGS-SISIRGFGSNRV------LVLVDGVPLNSGgGGSV 75
|
90 100 110
....*....|....*....|....*....|..
gi 446611965 121 QTSNIDLSSVQNVEVLRGPFSALYG-NASGGV 151
Cdd:pfam07715 76 DLNSIDPEDIERVEVLKGPASALYGsGAIGGV 107
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
10-696 |
5.10e-23 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 104.09 E-value: 5.10e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 10 VLPALLALSPV----VFAADE-----QTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTSVPGLQVQ--- 77
Cdd:PRK13483 8 VISALCLLPAVfvthALAQAApdktmETVVVTASGYEQQIRDAPASISVITREDLENRFYR-DLTDALLDVPGVVVTggg 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 78 NRQNyaqdlqLSIRGFGSRSTYgirgirlyvdgipaTMPDGQGQTS-----NID-----------LSSVQNVEVLRGPFS 141
Cdd:PRK13483 87 DRTD------ISLRGMGSQYTL--------------ILVDGKRQSSretrpNSDgpgveqawtppLAAIERIEVIRGPMS 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 142 ALYG-NASGGVMNVTTQ------TG--QQPPTIEASS-----YYGSF---GSWRYGLKATGATGDGTQPGDVDytvsttr 204
Cdd:PRK13483 147 SLYGsDAIGGVINIITRkvpnewQGevRLDTTLQENSdsgnvYQANFfvnGPLIKDLLGLQLYGQYTQREEDD------- 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 205 fTTHGYRDHSgaQKNLaNAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRA------EQYDtRKTIKQ 278
Cdd:PRK13483 220 -IEGGYRDKD--ARSL-TAKLALTPNEDHDIMLEVGTSNQERDSTVGKTVAPLAPGESCGRRGcpesstTEYE-RSTVSL 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 279 TQAG----------LRYERSLSSRDDMSVmmyagerETTQYQSIPMAPqLNPSHaggvitlqrhyqgidsrwthrgelgv 348
Cdd:PRK13483 295 SHTGrwdfgtsdtyIQHEEFDNKSREMKI-------KNTDFQSSLVAP-LGQEH-------------------------- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 349 pvTFTTGLNYENMSENRKGYNnfRLNSgmpeygqkgelRRDERNLMWNIdpYLQTQWQLSEKLSLDADVRYssvwfDSND 428
Cdd:PRK13483 341 --TLTFGAAYNHQDLTDETSN--QISD-----------LTDISRTQWAV--FSEDEWRIADDFALTGGLRL-----DHDE 398
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 429 HYvtpgnGDDSGDASYHKWLPAgslkyamtDAWNIYLAAGRGFETPTINELSyrAD-GQ--SGMNL----GLKPSTNDTI 501
Cdd:PRK13483 399 NF-----GGHVSPRVYGVWNLA--------PSWTVKGGVSTGFRAPSLRQTT--PDwGQvsRGGNIygnpDLKPETSLNK 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 502 EIGSKTRIGDGL-LSLALFQTDTDDEI--VV----------DSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASW 568
Cdd:PRK13483 464 ELGLYYDLGSGLtASLTVFYNEFKDKItrVAcpatqctdgpNQFGADPTTYVNIDEAVTQGVEASLSYPITSTLSLSGNY 543
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 569 TWLDATYRSNvcneqDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDE----NTAKAPSYTLVGLFTGY 644
Cdd:PRK13483 544 TYTDSEQKSG-----AYKGSPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQPTTgpssSSFIAPSYTFLDLGANY 618
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 446611965 645 KYNYhnlTVDLFGRVDNLFDKEyvgsviVNESNGRYYEpsPGRNYGVGMNIA 696
Cdd:PRK13483 619 QLTD---NLKLSAGIYNLFDKE------INYEEYGYVE--DGRRYWLGMTYS 659
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
15-681 |
1.14e-22 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 103.04 E-value: 1.14e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 15 LALSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQNYAQDlqLSIRGFG 94
Cdd:PRK10064 19 CAWPVLAVDDDGETMVVTASAVEQNLKDAPASISVITQEDLQ-RKPVQNLKDVLKEVPGVQLTNEGDNRKG--VSIRGLD 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 95 SRSTYG-IRGIRlyVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQ-TGQQpptieassYY 171
Cdd:PRK10064 96 SSYTLIlIDGKR--VNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGsDALGGVVNIITKkIGQK--------WH 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 172 GSFgswryglkatgatgdgtqpgDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRideasklslIFNSVDIKADDpgg 251
Cdd:PRK10064 166 GTV--------------------TVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMK---------AYGSLAKREKD--- 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 252 ltkAEWKANPQ---QAPRAEQYDTRK-------TIKQTQ---AGLRYERslSSRDDMSVMMYAGERETTQYqsipmapql 318
Cdd:PRK10064 214 ---DPQNSTTTdtgETPRIEGFTSRDgnvefawTPNQNHdftAGYGFDR--QDRDSDSLDKNRLERQNYSL--------- 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 319 npSHAG----GVITLQRHYQGIDSRwthrgelgvpvtfTTGLNYENMSENRKGYNNFRLNSGmpEYGQ----KGELRRDE 390
Cdd:PRK10064 280 --SHNGrwdyGNSELKYYGEKVENK-------------NPGNSSPITSESNSIDGKYTLPLT--AINQfltfGGEWRHDK 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 391 RNlmwniDP------------------YLQTQWQLSEKLSLDADVRYssvwfdsnDHYVTPGNgddsgdasyhKWLPAGS 452
Cdd:PRK10064 343 LS-----DAvnltggtssktsasqyalFVEDEWRIFEPLALTTGVRM--------DDHETYGD----------HWSPRAY 399
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 453 LKYAMTDAWNIYLAAGRGFETPTINELSyrADGQSGMNLG---------LKPSTNDTIEIGSKTRIGDGLL-----SLAL 518
Cdd:PRK10064 400 LVYNATDTVTVKGGWATAFKAPSLLQLS--PDWTSNSCRGackivgspdLKPETSESWELGLYYMGEEGWLegvesSVTV 477
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 519 FQTDTDDEIVVDSSS----------------GGRTT------YKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDAtyr 576
Cdd:PRK10064 478 FRNDVDDRISISRTSdvnaapgyqnfvgfetNGRGRrvpvfrYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDG--- 554
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 577 SNVCNEQDCNGNRMPgiaRNMGFASIGYVPE--DGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHnltVD 654
Cdd:PRK10064 555 RDVSNGENKPLSDLP---FHTANGTLDWKPLalEDWSFYVSGNYTGQKRADSATAKTPGGYTIWNTGAAWQVTKD---VK 628
|
730 740
....*....|....*....|....*...
gi 446611965 655 LFGRVDNLFDKEYV-GSVIVNESNGRYY 681
Cdd:PRK10064 629 LRAGVLNLGDKDLSrDDYSYNEDGRRYF 656
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
1-694 |
1.24e-21 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 100.10 E-value: 1.24e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 1 MKIFSVRQTVLPALLALSPVVFAAdEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVQNRQ 80
Cdd:PRK13486 1 MRITTLASVVIPCLGFSASSIAAA-EDVMIVSASGYEKKLTNAAASVSVISQEELQ-SSQYHDLAEALRSVEGVDVESGT 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 81 NYAQDLQLSIRGF-GSRSTYGIRGIRLyvDGIPATMPDGQGQTSN---IDLSSVQNVEVLRGPFSALYG-NASGGVMNVT 155
Cdd:PRK13486 79 GKTGGLEISIRGMpASYTLILIDGVRQ--GGSSDVTPNGFSAMNTgfmPPLAAIERIEVIRGPMSTLYGsDAMGGVVNII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 156 TQ--TGQQPPTIEA------SSYYGS---FGSWRYG--------LKATGATGDgtQPGDVDYTVSTTRFTTHGYRDHSga 216
Cdd:PRK13486 157 TRknADKWLSSVNAglnlqeSNKWGNssqFNFWSSGplvddsvsLQVRGSTQQ--RQGSSVTSLSDTAATRIPYPTES-- 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 217 qknlANAKLGVRID-EASKLSLIFNSVDIKaddpggltkaewkanpqqaprAEQYDTRKTIKQTQAG-----LRYERS-L 289
Cdd:PRK13486 233 ----QNYNLGARLDwKASEQDVLWFDMDTT---------------------RQRYDNRDGQLGSLTGgydrtLRYERNkI 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 290 SSRDDMSVMMYAGERETTQYQSIPMAPQLNPShaggVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYN 369
Cdd:PRK13486 288 SAGYDHTFTFGTWKSYLNWNETENKGRELVRS----VLKRDKWGLAGQPRELKESNLILNSLLLTPLGESHLVTVGGEFQ 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 370 NFRLNSGMPeYGQKGELRRDERnlmWNIdpYLQTQWQLSEKLSLDADVRYssvwfdsnDHYVTPGngddsGDASyhkwlP 449
Cdd:PRK13486 364 SSSMKDGVV-LASTGETFRQKS---WSV--FAEDEWHLTDALALTAGSRY--------EHHEQFG-----GHFS-----P 419
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 450 AGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGM-------NLGLKPSTNDTIEIGSKTRIGDGL-LSLALFQT 521
Cdd:PRK13486 420 RAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISGVSGQgktnllgNPDLKPEESVSYEAGVYYDNPAGLnANVTGFMT 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 522 DTDDEIVVDSSSGGRTTYKNAGKTRRQGAELA-----WDQrfagDFRVNASWTWLDATYRsnvcnEQDCNGNRMPGIARN 596
Cdd:PRK13486 500 DFSNKIVSYSINDNTNSYVNSGKARLHGVEFAgtlplWSE----DVTLSLNYTWTRSEQR-----DGDNKGAPLSYTPEH 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 597 MGFASIGYVPEDGWYAGTEARYMGDI---------------MADDENTAKAPSYTLVGLFTGYKYNYhnlTVDLFGRVDN 661
Cdd:PRK13486 571 MVNAKLNWQITEEVASWLGARYRGKTprftqnysslsavqkKVYDEKGEYLKAWTVVDAGLSWKMTD---ALTLNAAVNN 647
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 446611965 662 LFDKEYVGSVIVNESN-----GRYYEPS--------PGRNYGVGMN 694
Cdd:PRK13486 648 LLNKDYSDVSLYSAGKstlyaGDYFQTGssttgyviPERNYWMSLN 693
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
23-695 |
7.97e-19 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 91.24 E-value: 7.97e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 23 AADEQTMIVSAAPQVVSELdtpaAVSVVDGEEMRLATPRINLSESLTSVPGLQVQNRQNYAQ---DLQLSIRGFGSRSTY 99
Cdd:PRK13524 35 ASHEDTIVVTAAEQNLQAP----GVSTITAEDIRKRPPANDVSEIIRTMPGVNLTGNSTSGQrgnNRQIDIRGMGPENTL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 100 girgirLYVDGIPATM-----------PDGQGQTSNIDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTqtgqQPPTIE- 166
Cdd:PRK13524 111 ------ILIDGKPVSSrnsvrygwrgeRDTRGDTNWVPPEMIERIEVLRGPAAARYGNgAAGGVVNIIT----KKPTGEw 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 167 --ASSYYGSF-------GSWRYGLKATGATGDG-----------TQPGDVDYTVSTTRFTTHGYRDhsgaqkNLANAKLG 226
Cdd:PRK13524 181 hgSWNTYFNApehkaegATKRTNFSLSGPLGDElsfrlygnlnkTQADAWDINQGHQSARTGSYAG------TLPAGREG 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 227 VRideasklslifnSVDIKAddpggltKAEWKANPQQAPRAEqydtrktikqtqAGlryerslSSRDDmsvMMYAGERET 306
Cdd:PRK13524 255 VI------------NKDING-------LLRWDFAPLQSLELE------------AG-------YSRQG---NLYAGDTQN 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 307 TQYQSIpmapqLNPSHAGGVITLQRHYQGIdsrwTHRGELGVPVTFTTGLNYENMsenrkgyNNFRLNSGM--------- 377
Cdd:PRK13524 294 TNSDAL-----VKSLYGKETNRMYRQNYAL----THRGGWDNGVSTSNYAQYEHT-------RNSRLPEGLaggtegifn 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 378 PEYGQKGELRRDERNLM--WNI----------------------DPYLQTQ---------WQLSEKLSLDADVRYSSVWF 424
Cdd:PRK13524 358 EKATQFSTIDLDDVMLHseVNLpfdllvnqtltlgtewnqqrmkDPSSNTQaltsggaipGVSATGRSPYSKAEIFSLFA 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 425 DSN-----DHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTI-----NELSY-RADGQSGM---- 489
Cdd:PRK13524 438 EDNmeltdSTMLTPGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPNLyqtnpNYILYsKGQGCYASagng 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 490 -----NLGLKPSTNDTIEIGSKTRiGDGLL-SLALFQTDTDDEI-----VVDSSSGGRTT---YKNAGKTRRQGAElawd 555
Cdd:PRK13524 518 cylqgNDDLKAETSVNKEIGLEFK-RDGWLaGLTWFRNDYRNKIeagyvPVGTNSVGKTDiyqWENVPKAVVEGLE---- 592
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 556 qrfaGDFRV----NASWTwLDATYrsNVCNEQDCNGNRMPGIARNMGFASIGYVPEDG--------WYAGTEAR---YMG 620
Cdd:PRK13524 593 ----GTLNVpvseTVNWT-NNLTY--MLQSKNKTTGDPLSIIPEYTLNSTLSWQATEDlslqstftWYGKQKPKkynYKG 665
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 621 DIMADDENTAKAPsYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEY--------VGSVIVNESNGRYYEpsPGRNYGVG 692
Cdd:PRK13524 666 QPVTGSATKEVSP-YSIVGLSATYDVTKN---VSLTGGVDNLFDKRLwregnaqtTGDLIAGAGAYTYNE--PGRTYYMS 739
|
...
gi 446611965 693 MNI 695
Cdd:PRK13524 740 LNT 742
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-694 |
1.51e-17 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 86.75 E-value: 1.51e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 1 MKIFSVRQTVLPALLALSPVVFAA-------DEQTMIVSAA--PQVVSelDTPAAVSVVDGEEMRLATPRiNLSESLTSV 71
Cdd:PRK13513 3 QRFRKTHKAALVIAAAISSQAYAAektntatPTDTMVVTASgfQQRIQ--DAPASISVVTREQLENKAYR-DVTDALKDV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 72 PGLQVQNRqnyAQDLQLSIRGFGSRSTYgirgirLYVDG----IPATMPDGQGqtSNID------LSSVQNVEVLRGPFS 141
Cdd:PRK13513 80 PGVVVTGG---GSTSDISIRGMAAKYTL------ILVDGkrvdTRSTRPNSDG--SGIEqgwlppLAAIERIEVVRGPMS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 142 ALYG-NASGGVMNVTTQTGQQpptieassyygsfgSWRYGLKATGATGDGTQPGDVdytvsttrFTTHGYRdhSGAqknL 220
Cdd:PRK13513 149 SLYGsDAMGGVINIITRKVQK--------------EWHGSLRADATLQEDSKSGDI--------FQTNAYA--SGP---L 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 221 ANAKLGVRID------EASKLSLIFNSVDIKaddpGGLTKAEWKANPQQ-----APRAEQyDTRKTIKQTQAGL------ 283
Cdd:PRK13513 202 IDGLLGLKVSgllshrSEDKIIDGYNEQRMR----NGTATFSLTPDDNNefdfeIGRYVQ-DRNSTPGRTLALNgtnsdt 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 284 RYER---SLS---SRDDMSVMMYAgERETTQYQSIPMAPQLNPSHAGGVITLQRHYqgidsrwthrgelgvpVTFTTGLN 357
Cdd:PRK13513 277 QYDRnnyAIThngYYDFGNSTSYI-QRDETRNPSRQMKSVDTIFNTQTSFLLDDHT----------------LSLGGQYR 339
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 358 YENMSENrkgynnfrlNSGMPEYGQKGELRRdernlmWNIDPYLQTQWQLSEKLSLDADVRYssvwfDSNDHYVTpgngd 437
Cdd:PRK13513 340 YEELYDK---------GNQLPSASDLNKLTR------WSWALFAEDEWQMTNDFALTGGIRM-----DQDQNYGT----- 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 438 dsgdasyhKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYR------ADGQSGMNLG---LKPSTNDTIEIGSKTR 508
Cdd:PRK13513 395 --------HWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQATDNwgqltgGGGLPALILGnsdLKPEKSISQEIGILWD 466
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 509 IGDGL-LSLALFQTDTDDEI----VVDSSSG------GRTTYK------NAGKTRRQGAE--LAWDqrFAGDFRVNASWT 569
Cdd:PRK13513 467 NQENLnASVTLFNTDFKDKItevrNCDTTNTdgqcvfNGINYDfisdriNVDKANMRGVEatFNWD--INQAWSLATNYT 544
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 570 WLDATYRSNVCNEQDCngNRMPgiaRNMGFASIGY--VPE-DGW----YAGTEARYMGDI-MADdentaKAPSYTLVGLF 641
Cdd:PRK13513 545 FTQSEQKSGAFAGQPL--NQMP---KHMANATLNWqtTEDfATWirinYRGKTSEYLNRTsMGS-----GTPSYTFVDLG 614
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 446611965 642 TGYKYNYHnltVDLFGRVDNLFDKEyvgsvIVNESNGRYYEpspGRNYGVGMN 694
Cdd:PRK13513 615 ASYQLTKE---LRLMGGVYNLLDKR-----VDIDVNDKVLD---GRRYMVGAS 656
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
479-686 |
1.50e-15 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 80.62 E-value: 1.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 479 LSYRADGQSGMNLGLKPSTNDTIEIGSKTRIGDG--LLSLALFQTDTDDEIVVDSSSggrtTYKNAGKTRRQGAELAWDQ 556
Cdd:PRK09840 548 LAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKrlLLTAALFRTDIENEVEQNDDG----TYSQYGKKRVEGYELSVAG 623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 557 RFAGDFRVNASWTWLDATYRSNVCNEQDcNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYT 636
Cdd:PRK09840 624 NITPAWQVIAGYTQQKATVKNGKDVAQD-GSSSLPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHRGSDGAVGTPAFT 702
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 446611965 637 ----LVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSviVNESNGRYYepsPG 686
Cdd:PRK09840 703 egywVADAKLGYRVNRN---LDLQLNVYNLFDTDYVAS--INKSGYRYH---PG 748
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
44-670 |
4.47e-15 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 79.07 E-value: 4.47e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 44 PAAVSVVDGEEM--RLATPRINlsESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTygirgiRLYVDGIPaTMPDGQGQ 121
Cdd:PRK14050 80 PQSVSVVGRQEMddRGVTNKVD--EALRYTPGVLSQPFGTDGDTDWFYIRGFDATQT------GVFLDGLN-LFSYGFGG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 122 TSnIDLSSVQNVEVLRGPFSALYGNAS-GGVMNVTTQTGQQPPTieassYYGSFGSWRYGLKATG-ATGDG-TQPGDVDY 198
Cdd:PRK14050 151 FQ-IDPFMLERVEVLKGPASVLYGGSNpGGIVNMVSKRPLDEPL-----YYTEIGINSYGNAFTGfDVGDKlSDDGTVRY 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 199 TVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSL--IFNSVDIKADDPGGL------TKAEWKANPQQAPRAEQY 270
Cdd:PRK14050 225 RVTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVygYLSGLDQVHVGNGFLpyvgtvVDAPFGKIDRDAFYGEPD 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 271 DTRKTIKQTQAGLRYERSLSSRDDMSVMMYAG---ERETTQY------------QSIPMAPQLNP---SHAGGVITLqrh 332
Cdd:PRK14050 305 IDNGSYAQQMLGYEFSHEFDNGWTFSQNARYGhlhKHEKGPYtygyvggatglpDPTGPDYMLNRigfEHRSKVDSF--- 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 333 yqGIDSRWTHRGELG-VPVTFTTGLNYENmsenrkgynnFRLN-----------SGM-PEYGQ---------KGELRRDE 390
Cdd:PRK14050 382 --SIDNRLEGEFDTGaLTHNLLFGLDYKY----------YRLDqvqaccgatpiSATnPVYGTtqganfvylDQILTQQQ 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 391 rnlmwnIDPYLQTQWQLSEKLSLDADVRYSSVWFDSNDHyVTPGNGDDSGDASYHkwlpAGsLKYAMTDAWNIYLAAGRG 470
Cdd:PRK14050 450 ------IGIYAQDQIRFGDGWLVTLNGRYDYVDTDSDAR-IGTSYESNDGALSGR----AG-LAYEFDNGLTPYVSAATF 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 471 FeTPTInelsyradGQSGMNLGLKPSTNDTIEIGSKTR--IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYknaGKTRRQ 548
Cdd:PRK14050 518 F-NPLV--------GTLASGPPLKPEEGEQYEAGIKYEpsFIDGLITASVFQITKKNVTVTDPLTFASTQL---GEVRSR 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 549 GAELAWDQRFAGDFRVNASWTW--LDATYRSNvcneQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTE----ARYMGDI 622
Cdd:PRK14050 586 GFELEGKVNLDDNWKALASFTYtdLEITEDAN----PSLIGNSPYLVPETQASLWLDYAVTDGAFEGVSlgagVRYQGES 661
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 446611965 623 MADDENTAKAPSYTLVGLFTGYKYNyhNLTVDLfgRVDNLFDKEYVGS 670
Cdd:PRK14050 662 WADEANTLKVPAATLFDAAIRYEKN--DWGASL--NVANLFDKEYVAG 705
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
26-635 |
9.25e-15 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 78.13 E-value: 9.25e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 26 EQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTSVPGLQVqNRQNYAQDLqlSIRGFGSRSTYgirgir 105
Cdd:PRK13484 30 EDTLVVTASGFTQQLRNAPASVSVITSEQLQ-KKPVSDLVDAVKDVEGISI-TGGNEKPDI--SIRGLSGDYTL------ 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 106 LYVDGIPA----TMPDGQG--QTSNID-LSSVQNVEVLRGPFSALYG-NASGGVMNVTTQtgqqPPTIEassyygsfgSW 177
Cdd:PRK13484 100 ILVDGRRQsgreSRPNGSGgfEAGFIPpVEAIERIEVIRGPMSSLYGsDAIGGVINIITK----PVNNQ---------TW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 178 RYGLKATGATGDGTQPGDvdytvsttrfTTHGYRDHSGAqknLANAKLGVRIdeasklsliFNSVDIKADDpggltkaew 257
Cdd:PRK13484 167 DGVLGLGGIIQEHGKFGN----------STTNDFYLSGP---LIKDKLGLQL---------YGGMNYRKED--------- 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 258 kanpqqapRAEQYDTRKTIKQTQAGLRYerslSSRDDMSVMMYAGeRETTQYQSIPMAPQLNPSHAGGVITLQRHYQGID 337
Cdd:PRK13484 216 --------SISQGTPAKDNKNITATLQF----TPTESQKFVFEYG-KNNQVHTLTPGESLDAWTMRGNLKQPNSKRETHN 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 338 SR------WTHRGELGVP--VTFTTGLNYENMSENRKGYNNFRLN--SGMPE--------------------YG---QKG 384
Cdd:PRK13484 283 SRshwvaaWNAQGEILHPeiAVYQEKVIREVKSGKKDKYNHWDLNyeSRKPEitntiidakvtaflpenvltIGgqfQHA 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 385 ELRRDE-------RNLMWNIDP---YLQTQWQLSEKLSLDADVRyssvwFDSNDHYvtpgngddsgdASYhkWLPAGSLK 454
Cdd:PRK13484 363 ELRDDSatgkkttETQSVSIKQkavFIENEYAATDSLALTGGLR-----LDNHEIY-----------GSY--WNPRLYAV 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 455 YAMTDAWNIYLAAGRGFETPTINELS--YRADGQSGM-----NLGLKPSTNDTIEIGSKTRIGDGL-LSLALFQTDTDDE 526
Cdd:PRK13484 425 YNLTDNLTLKGGIAKAFRAPSIREVSpgFGTLTQGGAsimygNRDLKPETSVTEEIGIIYSNDSGFsASATLFNTDFKNK 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 527 IV------VDSSSGGRT-TYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSnvcNEQDCNGNRMPG-----IA 594
Cdd:PRK13484 505 LTsydigtKDPVTGLNTfIYDNVGEANIRGVELATQIPVYDKWHVSANYTFTDSRRKS---DDESLNGKSLKGeplerTP 581
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 446611965 595 RNMGFASI--GYVPEDGWYAGTEarYMG-DIMADDENTAKAPSY 635
Cdd:PRK13484 582 RHAANAKLewDYTQDITFYSSLN--YTGkQIWAAQRNGAKVPRV 623
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
9-670 |
1.77e-13 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 74.03 E-value: 1.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 9 TVLPALLALSPVVFAAD---EQTMIVSAAPQ------------------VVSELDT-----PAAVSVVDGEEMRLATPRi 62
Cdd:PRK10044 19 VVATAVSGMSVYAQAAVepkEETITVTAAPApqesawgpaatiaakrsaTGTKTDTpiektPQSISVVTAEEMALHQPK- 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 63 NLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTygirGIRLYVDGIPAtmpdgQGQTSN---IDLSSVQNVEVLRGP 139
Cdd:PRK10044 98 SVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQ----SQNNYLDGLKL-----QGNFYNdavIDPYMLERAELMRGP 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 140 FSALYGNAS-GGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpgdvdyTVSTTRFTthGYRDHSGAQK 218
Cdd:PRK10044 169 VSVLYGKSNpGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDD--------GVYSYRLT--GLARSANAQQ 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 219 NLANAK-------LGVRIDEASKLSLIFNSvdikADDP-----GGLTKaEWKANPqqAPRAEQYDT-------RKTIKQT 279
Cdd:PRK10044 239 KGSEEQryaiapsFTWRPDDKTNFTFLSYF----QNEPetgyyGWLPK-EGTVEP--LPNGKRLPTdfnegakNNTYSRN 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 280 QAGLRYERSLSSRDDMSV---MMYAgeRETTQYQSI---PMAPQLNPSHAGGVITLQRHYQ--GIDSRWTHRGELG-VPV 350
Cdd:PRK10044 312 EKMVGYSFDHEFNDTFTVrqnLRYA--ENKTSQRSVygyGVCSDKGHYLNRGYVVDDEKLQnfSVDTQLQSKFATGdVDH 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 351 TFTTGLNYENMsenRKGYN-NFRLNSGMPEYGQKGELRRDeRNLMWNIDPYL--------------QTQWqlsEKLSLDA 415
Cdd:PRK10044 390 TLLTGVDFMRM---RNDINaWFGYADSVPLLNLYGPVNTD-FDFNANSGPYQilnkqkqtglyvqdQAEW---DKWLVTL 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 416 DVRYSsvWFDSNDHYVTPGNGDDSGDASYhKWlpAGSLKYAMTDAWNIYLAAGRGFEtPTinelsyradgqSGMNLG--- 492
Cdd:PRK10044 463 GGRYD--WADQSSLNRVNGTTDKRDDKQF-TW--RGGVNYLFDNGITPYFSYSESFE-PS-----------SGTGKDgni 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 493 LKPSTNDTIEIGSKTRIGDGL--LSLALFQTDTDDEIVVDSSsgGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTW 570
Cdd:PRK10044 526 FAPSKGKQYEAGVKYVPKDRPivVTGAVYQLTKTNNLTADPE--NSFFSVQGGEIRARGVELEAKAALSANVNVTGSYTY 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 571 LDATYRSNVCNEqdcnGNRMPGIARNMGFASIGYV----PEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKY 646
Cdd:PRK10044 604 TDAEYTTDTTYK----GNTPAQVPKHMASLWADYTffdgPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKYDL 679
|
730 740
....*....|....*....|....*
gi 446611965 647 NYHNLTVDLFG-RVDNLFDKEYVGS 670
Cdd:PRK10044 680 ARFGMAGSSVAlNVNNLFDREYVAS 704
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
45-699 |
9.73e-13 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 71.60 E-value: 9.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 45 AAVSVVDG---EEMRlATPRINLSESLTSVPGLQVQNRQNYAQdlQLSIRGFGSRSTygirgiRLYVDGIPATMPDGQGQ 121
Cdd:TIGR01782 22 DADSVVDVisaEDIG-KLPDVNVAEALQRVPGVSIERDQGEGR--YVSVRGLGPSYN------RTTLNGRTIASTDSGGR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 122 TSNIDL---SSVQNVEVLRGPFSALYGNASGGVMNVTTQT--------------GQQPPTIEASSYYGSFG---SWRYGL 181
Cdd:TIGR01782 93 AFSLDLlpsELVSGVEVYKTPTADMDEGGIGGTVDLRTRSpfdydgrtlsgsaqGGYNDLAGKDKPGPRGAasySWTFGD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 182 KATGATGDGTQpGDVDY---TVSTTRFTT----------------HGYRDHSGAQKNL-ANAKLGVRIDEASKLSLIFNS 241
Cdd:TIGR01782 173 GQFGVLLSASY-QKRDFaedNVETENWGTytsadggaqglyfprgVRYRSYRNDRERKgVNGSLQWRPSDALELYLDTLY 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 242 VDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQ-AGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNP 320
Cdd:TIGR01782 252 SKYDDDETRQQIEFRTLNGGSTVITSNQTATSGALVQGTvANLQILVEARYNEEKETTTSLTLGGEWTGDRWTLDGDLGY 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 321 SHA-------------------------GGVITLQRHYQGID-SRWTHRGEL--------------------------GV 348
Cdd:TIGR01782 332 SKAtrdrpdrvtrfftaptpgydfdyrgGPTLTLGTPADGDDaSNYTNPANGelrrtqisyqkaedsedaaqldatfdGP 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 349 PVTFTTGLNYENMSENRKGYNNFRLN---------SGMPEYGQKGELRRDERNLMWNIDP-------------------- 399
Cdd:TIGR01782 412 FTSLKFGVRYRRRDKTNRGSRYRRSIigatgasglAGVPSDLAGAGLDGGLGGPLTGWDPadldaflnaargdaagggty 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 400 -------------------YLQTQWQLSEKLSLDADVRYSSVWFDSNDHYVTPGNG-------DDSGDASYHKWLPAGSL 453
Cdd:TIGR01782 492 tyastapntytvtedttaaYAMANFDTGLRLRGNVGVRYERTDQTSDGWQSQPAANgtgsvlvPVSADRDYTDVLPSLNL 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 454 KYAMTDAWNIYLAAGRGFETPTINELS-------YRADGQ---SGMNLGLKPSTNDTIEIGSKTRIGD-GLLSLALFQTD 522
Cdd:TIGR01782 572 AYDLTDDLVLRFAASKTITRPDFGDLAantslsdDGTGGTvtvSGGNPDLKPYESDNLDLSLEWYFGPgGLLSAAVFYKD 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 523 TDDEIV----VDSSSGGR---------TTYKNAGKTRR-QGAELAWDQRFAG------DFRVNASWTWLDATYRSNVCNE 582
Cdd:TIGR01782 652 IKNFIVtttsTETNDGGGglvvagvlvSRPVNGGKAGKiRGVELGYQQTFDFlpgplsGFGVQANYTYVDSEADPSVDGV 731
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 583 QDcNGNRMPGIARNMGFASIGYvpEDGWYAGTEA-RYMGDIM--ADDENTAKAP----SYTLVGLFTGYKYNYHnltVDL 655
Cdd:TIGR01782 732 QR-RKLPLPGLSKNTANATLYY--EKGGFSARLSyNYRSDYLldVGGSNINRLDryvdPRGQLDLSASYQVSDH---LSL 805
|
810 820 830 840
....*....|....*....|....*....|....*....|....
gi 446611965 656 FGRVDNLFDKEYVgSVIVNESNGRYYEpSPGRNYGVGMNiaWRF 699
Cdd:TIGR01782 806 GLQASNLTNEPSR-WYTGGKQRPREYV-ETGRTYMLGLR--YKF 845
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
41-665 |
7.00e-11 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 65.69 E-value: 7.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 41 LDTPAAVSVVDGEEMRLATPRiNLSESLTSVPGLQVqnrqnyaqdlqlSIRGFGSR-STYGIRGIRLYVDGI---PATMP 116
Cdd:PRK14049 77 LETPQSISSVTEQQLKDRNPQ-TLLETLAYTPGARV------------GAFGFDPRfDAFFVRGFDVTYTGVfrdNLRQP 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 117 DGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpGD 195
Cdd:PRK14049 144 GASSSIFKTEPYGLEGVSILRGPSSALYGaSGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNET---DP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 196 VDYtvsttRFTTHGyRDHSGAQKNLANAKLGV------RIDEASKLSLIFNSVDIKAddpGGltKAEWKANPQQAPRAEQ 269
Cdd:PRK14049 221 VYY-----RLTGLL-RDADTEQVGVPDDRAYIapaftwKPDEDTRLTVLGEYSRTKT---GG--TAAYYNDPLTGEVTDI 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 270 YD-----TRKTIKQTQAGLRYERSLSS----RDDMSV-MMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQgIDSR 339
Cdd:PRK14049 290 FAgnpafNDSVQKQGRIGYEFEHRLNDtfvfRQNARVsTLNIDADWAFAYAPNAADPTLLDSSAGTYDERLTAFV-IDNQ 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 340 WTHRGELG-VPVTFTTGLNYENM---SENRKGYNNfRLNSGMPEYGQKGE---LRRDERNLMWNIDPYLQTQWQLsEKLS 412
Cdd:PRK14049 369 LEAKFDTGaFEHTLLAGVDYTKLrfrALNGRGVSP-PLDTKNPTQGRPVAaidFSTRTVQDQWQLGTYLQDQIRY-DAWT 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 413 LDADVRYSSVWFDSNDHYVTPgngDDSGDASYHKWLPAGSLKYAMTDAWNIylaagrgfeTPTIN---ELSYRADGQSGM 489
Cdd:PRK14049 447 LTAGGRYDWVSTDTDTTDLAT---DSLTTVSQKDKEFSGRIGLTYETDFGL---------APYISystAFSPNAGFNRAT 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 490 NLGLKPSTNDTIEIGSKTRI--GDGLLSLALFQTDTDDEI---VVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRV 564
Cdd:PRK14049 515 NQPFKPTESEQQEVGVKYLLpnSNTLITAALFNIDQTNGLyyeVVFLAAGPTNIQVQRGKLRSRGFELEANTSLDNGLSL 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 565 NASWTWLDATYRSNVcneQDCNGNRMPGIARNMGFASIGY-VPEDGWYAG----TEARYMGDIMADDENTAKAPSYTLVG 639
Cdd:PRK14049 595 IASYTYTDVKIIQGP---EGTIGNEVSSVPNHMASAWAHYtLPEGGPLYGlglgAGARFVGSSYGNDQNTFKNSSRVLFD 671
|
650 660 670
....*....|....*....|....*....|.
gi 446611965 640 LFTGYKY-----NYHNLTVDLfgRVDNLFDK 665
Cdd:PRK14049 672 ASVGYDFaaidkKYEGLMLQV--NATNLFDR 700
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
14-667 |
2.39e-09 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 60.39 E-value: 2.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 14 LLALSPVVFAADEQ-----TMIVSAA--PQVVSELDTPaaVSVVDGEEMRLATPRiNLSESLTSVPGLQVQNRQNYAQDL 86
Cdd:PRK10641 8 LTALSVTAFSGWAQdtspdTLVVTANrfQQPVSTVLAP--TTVVTRDDIDRWQSK-SVNDVLRRLPGVDIAQNGGLGQLS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 87 QLSIRGFGSRSTYgirgirLYVDGIPATMP--DGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPP 163
Cdd:PRK10641 85 SLFIRGTNSSHVL------VLIDGVRLNQAgiSGSADLSQIPISLVQRIEYIRGPRSAVYGsDAIGGVVNIITTRDKPGT 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 164 TIEA---SSYYGSF-GSWRYGL-KATGATGDGtqpgdvDYTvsttrfTTHGYrdHSGAQKNLANAKLGVRIDEASKlsLI 238
Cdd:PRK10641 159 TLSAgwgSNGYQNYdGSTQQQLgDNTRVTLAG------DYT------YTKGF--DVVAYGNTGTQAQPDRDGFMSK--TL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 239 FNSVDIKADDP--------GGLTKAEWKAnpQQAPRAEQYDTRKTIKQT-QAGLRYerslsSRDDMSVMMYAGERETTQY 309
Cdd:PRK10641 223 WGGLEHQFNDQwsgfvrgyGYDNRTDYDA--YYSPGSPLIDTRQLYSQSwDAGLRY-----NGGIYSSQLIASYSHSKDY 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 310 QsipMAPQLNPSHAGGviTL----QRHYQgidsrWTHRGELGVPvTFTTGLNYENMsenrkgynnfRLNSGmPEYGQKGE 385
Cdd:PRK10641 296 N---YDPHYGRYDSSA--TLddmkQYNVQ-----WGNTVQVGHG-NISAGVDWQKQ----------TTTPG-TGYVPDGY 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 386 LRRdernlmwNIDPYLQTQWQLSEkLSLDADVRyssvwfdsndhyvtpgnGDDSGDASYH-KWLPAGSLKYamTDAWNIY 464
Cdd:PRK10641 354 DQR-------NTGIYLTGQQQIGD-VTLEGAAR-----------------SDDNSQFGWHgTWQTSAGWEF--IDGYRFI 406
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 465 LAAGRGFETPTINELsYRADGqsgmNLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGgrtTYKNAGK 544
Cdd:PRK10641 407 ASYGTAFKAPNLGQL-YGFYG----NPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDNLIDYDDHTL---KYYNVGK 478
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 545 TRRQGAElaWDQRF-AGDFRVNASWTWLDAtyrsnvcnEQDCNGNRMPGIARNMGFASIGYVPED-GW-----YAGTeaR 617
Cdd:PRK10641 479 ATIKGVE--WTGNFdTGPLTHQVTLDYVDP--------RNAITDEPLARRAKQQVKYQLDWQLYDfDWgvtyqYLGT--R 546
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 446611965 618 YMGDIMADDENTAKAPSYTLVGLFTGYKYNYHnLTVDlfGRVDNLFDKEY 667
Cdd:PRK10641 547 YDKDYSTYPYQTVKLGGVSLWDLAVSYPVTSH-LTVR--GKIANLFDKDY 593
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
1-693 |
6.31e-09 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 59.38 E-value: 6.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 1 MKIFSVRQTVLPAL-LALSPVVFAA-----DEQTMIVSAAPQvvSELDTPAAVSVVDGEEMRLATPRINLSESLTSVPGL 74
Cdd:PRK13528 3 MRVNKILWLLTVLLvGLNSPVSAAEssdddNGETMVVEATAE--QELKQQPGVSIITAEDIKKRPPVNDLSDIIRKMPGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 75 QVQNRQ---NYAQDLQLSIRGFGSRSTYgirgirLYVDGIPATMP-----------DGQGQTSNIDLSSVQNVEVLRGPF 140
Cdd:PRK13528 81 NLTGNSasgTRGNNRQIDIRGMGPENTL------ILIDGVPVTSRnsvryswrgerDTRGDTNWVPPEMVERIEVIRGPA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 141 SALYGN-ASGGVMNVTTQTGQQPPTIEASSYYGS------FGSWRYGLKATGA-TGDGTQP---GDVDYTVSTTRFTTHG 209
Cdd:PRK13528 155 AARYGSgAAGGVVNIITKRPTNDWHGSLSLYTNQpesskeGATRRANFSLSGPlAGDALTMrlyGNLNKTDADSWDINSS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 210 YRDHSGAQKNlanaklGVR-IDEASKLSlifnsvdikaddpggltkaeWKANPQQApraeqydtrktikqtqagLRYERS 288
Cdd:PRK13528 235 AGTKNAAGRE------GVRnKDINGVLS--------------------WKMTPQQI------------------LDFEAG 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 289 LSSRDDmsvmMYAGERETTQYQSIPMApqLNPSHAGGVITLQRHYqGIdsrwTHRG--ELGvpvTFTTGLNYENMsenrk 366
Cdd:PRK13528 271 YSRQGN----IYAGDTQNSNSSAVTES--LAKSGKETNRLYRQNY-GL----THNGiwDWG---QSRLGFYYEKT----- 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 367 gyNNFRLNSGMPEyGQKGELRRDER-------------------NLMWNIDPYLQTQWqLSEKLSLDADVRY-------- 419
Cdd:PRK13528 332 --NNTRMNEGLAG-GGEGRITADQTfttsrlesyrtsgelnvplNWLFEQTLTVGAEW-NRDELNDPSSTSLtvkdgdig 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 420 -----------------SSVWFDSNDHY-----VTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTI- 476
Cdd:PRK13528 408 gisgsaadrssknkseiSALYVEDNIEPvpgtnLIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAPNLy 487
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 477 ----NELSY-RADG-QSGMNLG---------LKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTT--- 538
Cdd:PRK13528 488 qsseGYLLYsRGNGcPKDITSGgcylvgnknLDPEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIVAGDDVIGRTAsga 567
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 539 ----YKNAGKTRRQGAE------LAWDQRfagDFRVNASWTwldatyrsnVCNEQDCNGNRMPGIARNMGFASIGYVPED 608
Cdd:PRK13528 568 yilqWQNGGKAVVEGLEgnllvpLMKDRL---NWNTNATYM---------ITSEQKDTGNPLSVIPKYTINSTLDWQITQ 635
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 609 GW--------YAGTEARYMGDIMADDENTA---KAPSYTLVGLFTGYKYNyHNLTVDlfGRVDNLFDKEyvgsvIVNESN 677
Cdd:PRK13528 636 ALsanvnwtlYGKQKPRTHAESRSEETGGLsgkELGAYSLVGVNVNYDIN-KNLRLN--VGVSNLFDKQ-----IYREGE 707
|
810
....*....|....*.
gi 446611965 678 GRYYEPSPGRNYGVGM 693
Cdd:PRK13528 708 GANTYNEPGRAYYAGV 723
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
410-584 |
1.54e-03 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 41.49 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 410 KLSLDADVRYSSVWFDSNDHyvtpgNGDDSGDASYHKWLPAGSLKYAMTDA--WNIYLAAGRGFETPTINELS---YRAD 484
Cdd:pfam14905 127 KWSYQAGLRAEYTDIDGDSV-----TTNETFKRNYFNLFPSASLSYKLNDNnsLQLSLYYRRIINRPSYWDLNpfrNYSD 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446611965 485 GQS---GmNLGLKPSTNDTIEIGSKTRIGdglLSLALF---QTDTDDEIVVDSSSGG--RTTYKNAGKTRRQGAELAWDQ 556
Cdd:pfam14905 202 PYNysqG-NPNLKPEYTNSFELGYTYKWK---LSLSLSyryTNDVIQQTFITDDNDNvtYTTYENLGKSNSYGLELSASF 277
|
170 180
....*....|....*....|....*...
gi 446611965 557 RFAGDFRVNASWTWLDATYRSNVCNEQD 584
Cdd:pfam14905 278 NPTKWWSLNGNLNGYYNKYKIDGSLNSD 305
|
|
| |
