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Conserved domains on  [gi|446604957|ref|WP_000682303|]
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MULTISPECIES: DUF1317 family protein [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1317 super family cl06183
Protein of unknown function (DUF1317); This family consists of several hypothetical bacterial ...
 1-52 5.15e-32

Protein of unknown function (DUF1317); This family consists of several hypothetical bacterial and phage proteins of around 60 residues in length. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam07026:

Pssm-ID: 284449  Cd Length: 60  Bit Score: 104.44  E-value: 5.15e-32
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446604957   1 MKHPHDNIRVGAITFVYSVTKRGWVFPGLSVIRNPLKAQRLAEEINNKRESV 52
Cdd:pfam07026  1 MKHNHDDIQVGAITCPYSTFHRGWLFPGGKIIKNPFKAQNAAEEINNKRGAV 52
 
Name Accession Description Interval E-value
DUF1317 pfam07026
Protein of unknown function (DUF1317); This family consists of several hypothetical bacterial ...
 1-52 5.15e-32

Protein of unknown function (DUF1317); This family consists of several hypothetical bacterial and phage proteins of around 60 residues in length. The function of this family is unknown.


Pssm-ID: 284449  Cd Length: 60  Bit Score: 104.44  E-value: 5.15e-32
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446604957   1 MKHPHDNIRVGAITFVYSVTKRGWVFPGLSVIRNPLKAQRLAEEINNKRESV 52
Cdd:pfam07026  1 MKHNHDDIQVGAITCPYSTFHRGWLFPGGKIIKNPFKAQNAAEEINNKRGAV 52
 
Name Accession Description Interval E-value
DUF1317 pfam07026
Protein of unknown function (DUF1317); This family consists of several hypothetical bacterial ...
 1-52 5.15e-32

Protein of unknown function (DUF1317); This family consists of several hypothetical bacterial and phage proteins of around 60 residues in length. The function of this family is unknown.


Pssm-ID: 284449  Cd Length: 60  Bit Score: 104.44  E-value: 5.15e-32
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446604957   1 MKHPHDNIRVGAITFVYSVTKRGWVFPGLSVIRNPLKAQRLAEEINNKRESV 52
Cdd:pfam07026  1 MKHNHDDIQVGAITCPYSTFHRGWLFPGGKIIKNPFKAQNAAEEINNKRGAV 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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