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Conserved domains on  [gi|446599982|ref|WP_000677328|]
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MULTISPECIES: fimbria/pilus periplasmic chaperone [Escherichia]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15253 super family cl33116
putative fimbrial assembly chaperone protein StcB; Provisional
 1-224 2.16e-120

putative fimbrial assembly chaperone protein StcB; Provisional


The actual alignment was detected with superfamily member PRK15253:

Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 342.03  E-value: 2.16e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   1 MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG 80
Cdd:PRK15253  16 MKILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVA 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  81 ENSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG 160
Cdd:PRK15253  96 AESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKT 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446599982 161 LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSINVKSNNANNWYLTIIDDHGNYISDKI 224
Cdd:PRK15253 176 VIMKNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISSKI 239
 
Name Accession Description Interval E-value
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 1-224 2.16e-120

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 342.03  E-value: 2.16e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   1 MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG 80
Cdd:PRK15253  16 MKILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVA 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  81 ENSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG 160
Cdd:PRK15253  96 AESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKT 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446599982 161 LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSINVKSNNANNWYLTIIDDHGNYISDKI 224
Cdd:PRK15253 176 VIMKNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISSKI 239
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-221 2.02e-75

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 227.56  E-value: 2.02e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   4 LLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGENS 83
Cdd:COG3121    9 LLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGK 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  84 GQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVI 163
Cdd:COG3121   89 SQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTV 168

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446599982 164 KNDSANWVTISDVK--ANNVKVNYETIMIAPLESQSINVKSNNA----NNWYLTIIDDHGNYIS 221
Cdd:COG3121  169 TNPGPYYVTLSDLSlgAGGKKLKKGLGMVLPGSTRRWPLPAGASlaagGKVTWATINDYGGAVP 232
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 20-142 3.90e-52

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 164.30  E-value: 3.90e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   20 IVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGENSGQQVKIKIMPNKLPTN 99
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 446599982  100 KESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIA 142
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 1-224 2.16e-120

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 342.03  E-value: 2.16e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   1 MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG 80
Cdd:PRK15253  16 MKILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVA 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  81 ENSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG 160
Cdd:PRK15253  96 AESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKT 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446599982 161 LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSINVKSNNANNWYLTIIDDHGNYISDKI 224
Cdd:PRK15253 176 VIMKNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISSKI 239
PRK15218 PRK15218
fimbrial assembly chaperone;
1-224 7.96e-106

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 304.21  E-value: 7.96e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   1 MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG 80
Cdd:PRK15218   1 MKWMIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  81 ENSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG 160
Cdd:PRK15218  81 ANSGQQLKIKKLANNLPGDRESLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446599982 161 LVIKNDSANWVTISDVKANNvKVNYETIMIAPLESQSINVkSNNANNWYLTIIDDHGNYISDKI 224
Cdd:PRK15218 161 ISVKNNSANWITIPEIKAKS-KVNKETLLLAPWSSQSITT-TVVVNSYTVTLIDDSGNYLNETV 222
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-221 2.02e-75

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 227.56  E-value: 2.02e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   4 LLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGENS 83
Cdd:COG3121    9 LLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGK 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  84 GQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVI 163
Cdd:COG3121   89 SQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTV 168

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446599982 164 KNDSANWVTISDVK--ANNVKVNYETIMIAPLESQSINVKSNNA----NNWYLTIIDDHGNYIS 221
Cdd:COG3121  169 TNPGPYYVTLSDLSlgAGGKKLKKGLGMVLPGSTRRWPLPAGASlaagGKVTWATINDYGGAVP 232
PRK09926 PRK09926
fimbrial chaperone;
2-220 2.11e-55

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 176.83  E-value: 2.11e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   2 KGLLALLISSMVL---PAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAK 78
Cdd:PRK09926   6 KHTTALCFATCMAfssSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSR 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  79 IGENSGQQVKIKIMPNK-LPTNKESIFYLNVLDIPP--NSPEQEGKNALKFAMQNRIKLFYRPAGI--APVNKATFKKLL 153
Cdd:PRK09926  86 IDPKRGQTIKLMYTASTaLPKDRESVFWFNVLEVPPkpDAEKVANQSLLQLAFRTRIKLFYRPDGLkgNPSEAPLALKWS 165

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446599982 154 VNRSGN--GLVIKNDSANWVTISDV--KANNVKVNYETIMIAPLESQSINVK--SNNANNWYLTI--IDDHGNYI 220
Cdd:PRK09926 166 WAGSEGkaSLRVTNPTPYYVSFSSGdlEAGGKRYPVDSKMIAPFSDESMKVKglSGKASSGKVHFyaINDFGGAI 240
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 20-142 3.90e-52

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 164.30  E-value: 3.90e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   20 IVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGENSGQQVKIKIMPNKLPTN 99
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 446599982  100 KESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIA 142
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
PRK15249 PRK15249
fimbrial chaperone;
16-222 1.75e-42

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 144.17  E-value: 1.75e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  16 AHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEK-IQVPFMLTPPVAKIGENSGQQVKIKIMPN 94
Cdd:PRK15249  26 SWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENsSAMPFIATPPVFRIQPKAGQVVRVIYNNT 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  95 K-LPTNKESIFYLNVLDIPPNSPEQEG-KNALKFAMQNRIKLFYRPAGIAPVNKaTFKKLLV-----NRSGNGLVIKNDS 167
Cdd:PRK15249 106 KkLPQDRESVFWFNVLQVPPTNIGSDSgQNKMLVMLRSRIKLFYRPDGLGKPDN-LAKKLQIktvnkGSGKSGIVIVNPQ 184

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446599982 168 ANWVTISD--VKANNVKVNYETIMIAPLESQSI----NVKSNNANNWY-LTIIDDHGNYISD 222
Cdd:PRK15249 185 PWFASLSNlnVKVNGASYNLDADMIAPFSSQTWwlpgKRSLKSFSGTVtVTLVNDQGARISE 246
PRK15208 PRK15208
molecular chaperone LpfB;
4-217 2.56e-31

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 114.62  E-value: 2.56e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   4 LLALLISSMVLPAhaGIVIYGTRIIYPAEHKEVMVQLMNQG-NRSSLLQAWIDDGDTSLppekiQVPFMLTPPVAKIGEN 82
Cdd:PRK15208   9 LALALIAQNSFAG--GVALSSTRVIYDGSKKEASLTVNNKSkTEEFLIQSWIDDANGNK-----KTPFIITPPLFKLDPT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  83 SGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLV 162
Cdd:PRK15208  82 KNNVLRIVNITNTLPQDRESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQIK 161

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446599982 163 IKNDSANWVTISDVKANNVKVNyETIMIAPLESQSINVKS--NNANNWYLTIIDDHG 217
Cdd:PRK15208 162 VENPSAFNLTFNQFYANGRDIE-KAGMVPAKGSLNIELPAgtGKVSEVKYNIINDFG 217
PRK15211 PRK15211
fimbrial chaperone;
1-217 2.22e-28

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 106.83  E-value: 2.22e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   1 MKGLLALLISSMV-LPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSlppeKIQVPFMLTPPVAKI 79
Cdd:PRK15211   4 MKWGLVSLLSLAVcGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDNTTQG----SSTVYMVPAPPFFKV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  80 GENSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGkNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGN 159
Cdd:PRK15211  80 RPKEKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKASEG-NVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGG 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446599982 160 GLVIKNDSANWVTISDVKANN--VKVNYETI----MIAPLESQSINVKSNNANnwyLTI--IDDHG 217
Cdd:PRK15211 159 ETYLKNPTPYYFAVTGVKLNGqpVKLSDRVMneiaQLAPFSEVSLGKLSLNGT---VTVqaVNDWG 221
lfpB PRK15290
fimbrial chaperone;
4-224 2.34e-27

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 104.69  E-value: 2.34e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   4 LLALLISSMVLpAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNR-SSLLQAWIDDGDTSlppEKIQVPFMLTPPVAKIgEN 82
Cdd:PRK15290  24 ILSVFLGQPAL-TYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPFNKE---DKSKAPFTVIPPVSRL-EP 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  83 SGQQVK--IKIMPNKLPTNKESIFYLNVLDIPPnSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG 160
Cdd:PRK15290  99 SQEKVLriIHTKGVSLPDDRESVFWLNIKNIPP-SASNKATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRN 177

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446599982 161 LVIKNDSANWVTISD--VKANNVKVNyetiMIAPLESQSINVKSNNANN---WylTIIDDHGNyISDKI 224
Cdd:PRK15290 178 LIAENPNPIHISVMDviVDGHDVPLN----MIRPFETLTLPLPANSAGGqmtW--RFINDYGA-VSDPI 239
PRK15195 PRK15195
molecular chaperone FimC;
4-217 2.72e-27

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 103.79  E-value: 2.72e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   4 LLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQG-NRSSLLQAWIDDgdTSLPPEKiqvPFMLTPPVAKIGEN 82
Cdd:PRK15195  11 IIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHtNERYLVNSWIEN--SSGVKEK---SFIVTPPLFVSEPK 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  83 SGQQVKIKIMPNKLPTNKESIFYLNVLDIPP-NSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGL 161
Cdd:PRK15195  86 SENTLRIIYAGPPLAADRESLFWMNVKAIPSvDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHL 165

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446599982 162 VIKNDSANWVTISDVKANNVKVnyETIMIAPLESQSINVKSNNANNWYLTIIDDHG 217
Cdd:PRK15195 166 KVHNPSPYYVTLVNLQVGSQKL--GNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYG 219
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 2-219 3.07e-27

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 104.48  E-value: 3.07e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   2 KGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNqGNRS--SLLQAWIDDGDTSlppeKIQVPFMLTPPVAKI 79
Cdd:PRK15274  10 QALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKN-GNATlpYLAQAWLEDDKFA----KDTRYFTALPPLQRI 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  80 GENSGQQVKIKIMPNK--LPTNKESIFYLNVLDIPPNSpeqEGKNALKFAMQNRIKLFYRPAGIAPVNKATF---KKLLV 154
Cdd:PRK15274  85 EPKSDGQVKVQPLPAAasLPQDRESLFYFNVREIPPKS---DKPNTLQLALQTRIKFFYRPVAVARQVDKTHpwqTKLTL 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446599982 155 NRSGNGLVIKNDSANWVTISDV--KANNVKVNYETIMIAPLESQSINVKSNN-ANNWYLTIIDDHGNY 219
Cdd:PRK15274 162 TYQGDGVIFDNPTPFYLVISNAgsKENETASGFKNLLIAPREKVTSPIKGASlGSSPVVGYVDDYGGH 229
PRK15295 PRK15295
fimbrial assembly chaperone;
4-217 3.04e-26

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 101.17  E-value: 3.04e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   4 LLALLISSMVlpAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKiqvPFMLTPPVAKIgeNS 83
Cdd:PRK15295   7 VLVVLLTSHV--AHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQVTNKQ---AFIITPPLFRL--DA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  84 GQQVKIKIMPN--KLPTNKESIFYLNVLDIpPNSPEQEGKNALKFAMQNRIKLFYRPAGI-APVNKATFKKLLVNRSGNG 160
Cdd:PRK15295  80 GQKNSIRVIRSgaPLPADRESMYWLNIKGI-PSIDDNASANRVEISINTQIKLIYRPPALtKSTPDSQSQQLKWQTAGDV 158

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446599982 161 LVIKNDSANWVTISDVKANNVKVNYETiMIAPLESQSINVKSNNANNWYLT--IIDDHG 217
Cdd:PRK15295 159 ITVNNPTPYYMNFASVTLNSHEVKSAT-FVPPKSSASFKLGSTAAPHGTVTwrLISDYG 216
PRK15285 PRK15285
fimbrial chaperone StfD;
16-217 2.16e-25

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 99.47  E-value: 2.16e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  16 AHAGIVIYGTRIIYPAEHKEVMVQLMNQGNR-SSLLQAWIDDGDTSlppeKIQVPFMLTPPVAKIGENSGQQVKIKIMPN 94
Cdd:PRK15285  23 AQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVEDEKGV----KITSPLIVVPPVQRIEPSAIGQVKIQGMPA 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  95 --KLPTNKESIFYLNVLDIPPNSpeqEGKNALKFAMQNRIKLFYRPAGIAPVNKAT--FKKLLVNRSGNGLVIKNDSANW 170
Cdd:PRK15285  99 laSLPQDRETLFYYNVREIPPQS---DKPNTLQIALQTRIKVFYRPQALSKIDMQHpwQYKITLQRQGNGYQVSNPTGYY 175

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446599982 171 VTISDVKA---NNVKVNYETIMIAPLESQSINVKSNN-ANNWYLTIIDDHG 217
Cdd:PRK15285 176 VVLSNASNrmdGTPARGFSPLVIAPKSNVTLGGDASElGHSPVLTYVNDYG 226
PRK15246 PRK15246
fimbrial assembly chaperone;
15-219 2.99e-25

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 98.88  E-value: 2.99e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  15 PAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGENSGQQVKIKIMPN 94
Cdd:PRK15246   7 PAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  95 K-LPTNKESIFYLNVLDIPPNSpeQEGKNA---LKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNdSANW 170
Cdd:PRK15246  87 QqLATDRESLFWLNIYQIPPVT--QDIKNHprkLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVN-PTSW 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446599982 171 VTISDVKANNvKVNYETIMIAPLESQSINVKSNNA--NNWYLTIIDDHGNY 219
Cdd:PRK15246 164 YMSLTLTMDN-KKSIGDIMVAPKTALDVPLTRSPTpgASINYAVINDSGNW 213
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 18-217 1.24e-21

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 89.45  E-value: 1.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  18 AGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLL-QAWIDDGDTSLPPekiqvPFMLTPPVAKIGENSGQQVKI---KIMP 93
Cdd:PRK15254  16 AAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLaQSWVTDADGVRTD-----ALMALPPLQRIDAGQKSQVRItqvRGLT 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  94 NKLPTNKESIFYLNVLDIPPNSpeqEGKNALKFAMQNRIKLFYRP-AGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVT 172
Cdd:PRK15254  91 DKLPQDRETLFWFNVRGVPPKP---EDDNVLQLAMQSQLKLFYRPkAIIRSSSDQPERKLTAERNAGHLTLRNPTPYYIT 167

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 446599982 173 ISDV---KANNVKVNYETIMIAPLESQSIN-VKSNNANNWYLTIIDDHG 217
Cdd:PRK15254 168 VAWLgadRSHRLSGFREGVMVPPLGSLPLKaVLPAETRTLWVGYIDDYG 216
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 3-217 4.26e-20

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 84.83  E-value: 4.26e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   3 GLLALLISSMVLPAhAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDgdTSLPPEKIQVPFMLTPPVAKIgeN 82
Cdd:PRK15299   8 GLLCCLLCGSLAHA-AGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQS--ISETGASGDAPFMVTPPLFRL--N 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  83 SGQQVKIKIMP--NKLPTNKESIFYLNVLDIPPNSPEQEgKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG 160
Cdd:PRK15299  83 GGQKNVLRIIRtgGNLPEDRESLYWLDIKSIPSSNPDNK-HNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRT 161

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446599982 161 LVIKNDSANWVTISDVKANNVKVNYETiMIAPLESQSINVKSNNANNWYLTIIDDHG 217
Cdd:PRK15299 162 LTVKNPTPYYMNFATLSVGSQKVKAPR-YVAPFGNAQYTLPAAASGPIAWSIINDFG 217
PRK15233 PRK15233
fimbrial chaperone SefB;
19-220 1.29e-19

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 84.01  E-value: 1.29e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  19 GIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSlppekIQVPFMLTPPVAKIGENSGQQVKIKIMPNKLPT 98
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKS-----SKAPFIVTPPILKVESNARTRLKVIPTSNLFNK 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  99 NKESIFYLNVLDIPP-NSPEQEGKNAL------KFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWV 171
Cdd:PRK15233 116 NEESLYWLCVKGVPPlNDNESNNKNNIttnlnvNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYV 195

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 446599982 172 TISDVKANNVKVNYETIMIAPLESQSInvKSNNANNWYLTIIDDHGNYI 220
Cdd:PRK15233 196 NIANIKSGNLSFNIPNGYIEPFGYAQL--PGGVHSKITLTILDDNGAEI 242
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
16-179 2.16e-19

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 83.21  E-value: 2.16e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  16 AHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGD--TSLPPEKIQVPFMLTPPVAKIGENSGQQVKIKIMP 93
Cdd:PRK15192  20 AQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGrwPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTG 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  94 NKLPTNKESIFYLNVLDIPPNSPEqegKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTI 173
Cdd:PRK15192 100 APLPADRESLFTLSIAAIPSGKPE---ANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTPYYVTL 176


                 ....*.
gi 446599982 174 SDVKAN 179
Cdd:PRK15192 177 FLLRAN 182
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 1-192 3.52e-16

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 74.41  E-value: 3.52e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   1 MKGLLALLISSMVLPAHAG-IVIYGTRIIYPAEHKEVMVQLMNQGNRSS-LLQAWIDDGDTSLPPEkiqvpFMLTPPVAK 78
Cdd:PRK15188   9 LRLLLLLSAAGLSFAAQAGgIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANADGSRSTD-----FIITPPLFV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  79 IGENSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSG 158
Cdd:PRK15188  84 IQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNER 163

                        170       180       190
                 ....*....|....*....|....*....|....
gi 446599982 159 NGLVIKNDSANWVTISDVKANNVKVnyETIMIAP 192
Cdd:PRK15188 164 GQLTITNPSPYYVSMVELYSAGKKL--PNTMVPP 195
PRK11385 PRK11385
fimbrial chaperone;
3-179 1.36e-13

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 67.47  E-value: 1.36e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   3 GLLALLISSMVlpaHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWID------DGDTSLPPekiqVPFMLTPPV 76
Cdd:PRK11385  14 AVLSLLVAGEL---QAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrptrwaGGEASTVP----APLLAAPPL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  77 AKIGENSGQQVK-IKIMPNKLPTNKESIFYLNVLDIPPNSPEQEgknALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVN 155
Cdd:PRK11385  87 ILLKPGTTGTLRlLRTESDILPVDRETLFELSIASVPSGKVENQ---SVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWT 163

                        170       180
                 ....*....|....*....|....
gi 446599982 156 RSGNGLVIKNDSANWVTISDVKAN 179
Cdd:PRK11385 164 RNSQGVQLTNPTPYYINLIQVSVN 187
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 4-168 1.09e-11

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 61.98  E-value: 1.09e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982   4 LLALLISSMVLPAhAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDgdtsLPPEKIQVpFMLTPPVAKIGENS 83
Cdd:PRK09918  11 ALVLLSSSSAVHA-AGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTTLVD----LPEDKSKL-LLVTPPVARVEPGQ 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  84 GQQVKIkIMPNKLPTNKESIFYLNVLDIPPNSPeqeGKNALKFAMQNRIKLFYRPAGIaPVNKATFKKLLVNRSGNGLVI 163
Cdd:PRK09918  85 SQQVRF-ILKSGSPLNTEHLLRVSFEGVPPKPG---GKNKVVMPIRQDLPVLIQPAAL-PVVRDPWKLLVWSISGNNLVV 159


                 ....*
gi 446599982 164 KNDSA 168
Cdd:PRK09918 160 SNPSP 164
PRK15224 PRK15224
pili assembly chaperone PapD;
24-217 1.77e-09

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 55.90  E-value: 1.77e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982  24 GTRIIYPAEHKEVMVQLMNQGNRSSLLQAWIDDGDTSLPpekiqVPFMLTPPVAKIGENSGQQVKIKIMPNKLPTNKESI 103
Cdd:PRK15224  34 ATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSSP-----APFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETL 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446599982 104 FYLNVLDIPP-NSP-EQEGKNA---LKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKA 178
Cdd:PRK15224 109 QWVCIKAVPPeNEPsDTQAKGAtldLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTV 188

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 446599982 179 NNVKVNyETIMIAPLESQSINVKSNNANNWYLTIIDDHG 217
Cdd:PRK15224 189 GGKPIT-GLEYIPPFADKTLNMPGSAHGDIEWRVITDFG 226
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 163-221 8.01e-06

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 42.25  E-value: 8.01e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446599982  163 IKNDSANWVTISDVKANNVKVNYETI--MIAPLESQSINVKSNNANNW--YLTIIDDHGNYIS 221
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDpgMVAPFSSQTFAGLPAPAAGGtvSYTYINDYGGIVP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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