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Conserved domains on  [gi|446587782|ref|WP_000665128|]
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MULTISPECIES: amidohydrolase family protein [Enterobacteriaceae]

Protein Classification

amidohydrolase family protein( domain architecture ID 10792828)

amidohydrolase family protein similar to Escherichia coli protein YahJ, a putative deaminase with a metallo-dependent hydrolase domain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK06846 PRK06846
putative deaminase; Validated
49-460 0e+00

putative deaminase; Validated


:

Pssm-ID: 235873 [Multi-domain]  Cd Length: 410  Bit Score: 731.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  49 ITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTF 128
Cdd:PRK06846   1 ITDPHYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQVPDATLPTYDANGLLMLPAFREMHIHLDKTY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 129 YGGPWRSLnRPAgTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQA 208
Cdd:PRK06846  81 YGGPWKAC-RPA-KTIQDRIELEQKELPELLPTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKD 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 209 GFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAIN 288
Cdd:PRK06846 159 GFTYEIVAFPQHGLLRSNSEPLMREAMKMGAHLVGGVDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVATIK 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 289 YMVETVEKTpQLKGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHW 368
Cdd:PRK06846 239 YLVETTEEA-QWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTVPIGRLHMPIPLLHDKGVKVSLGTDSVIDHW 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 369 SPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATF 448
Cdd:PRK06846 318 SPFGTGDMLEKANLLAELYRWSDERSLSRSLALATGGVLPLNDEGERVWPKVGDEASFVLVDASCSAEAVARQSPRTAVF 397
                        410
                 ....*....|..
gi 446587782 449 HKGQLVWGSVAG 460
Cdd:PRK06846 398 HKGQLVAGSLAG 409
 
Name Accession Description Interval E-value
PRK06846 PRK06846
putative deaminase; Validated
49-460 0e+00

putative deaminase; Validated


Pssm-ID: 235873 [Multi-domain]  Cd Length: 410  Bit Score: 731.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  49 ITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTF 128
Cdd:PRK06846   1 ITDPHYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQVPDATLPTYDANGLLMLPAFREMHIHLDKTY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 129 YGGPWRSLnRPAgTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQA 208
Cdd:PRK06846  81 YGGPWKAC-RPA-KTIQDRIELEQKELPELLPTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKD 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 209 GFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAIN 288
Cdd:PRK06846 159 GFTYEIVAFPQHGLLRSNSEPLMREAMKMGAHLVGGVDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVATIK 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 289 YMVETVEKTpQLKGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHW 368
Cdd:PRK06846 239 YLVETTEEA-QWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTVPIGRLHMPIPLLHDKGVKVSLGTDSVIDHW 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 369 SPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATF 448
Cdd:PRK06846 318 SPFGTGDMLEKANLLAELYRWSDERSLSRSLALATGGVLPLNDEGERVWPKVGDEASFVLVDASCSAEAVARQSPRTAVF 397
                        410
                 ....*....|..
gi 446587782 449 HKGQLVWGSVAG 460
Cdd:PRK06846 398 HKGQLVAGSLAG 409
Bact_CD cd01293
Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) ...
55-454 1.39e-148

Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.


Pssm-ID: 238618 [Multi-domain]  Cd Length: 398  Bit Score: 428.97  E-value: 1.39e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  55 YLDNVLLETGfdyengvavqtRTARQTVEIQDGKIVALRENKQHPDAtLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWR 134
Cdd:cd01293    1 LLRNARLADG-----------GTALVDIAIEDGRIAAIGPALAVPPD-AEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWP 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 135 SLNRpaGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEI 214
Cdd:cd01293   69 NNSG--GTLLEAIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQI 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 215 VAFPQHGLLLSK-SEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVET 293
Cdd:cd01293  147 VAFPQHGLLSTPgGEELMREALKMGADVVGGIPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSRTLEELAEE 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 294 VEKTPqLKGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIG-------------TLHMPLKQLHDKGVKVMTG 360
Cdd:cd01293  227 AERRG-MQGRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINlylqgredttpkrRGVTPVKELRAAGVNVALG 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 361 TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKgERVWPKAQDDASFVLVDASCSAEAVAR 440
Cdd:cd01293  306 SDNVRDPWYPFGSGDMLEVANLAAHIAQLGTPEDLALALDLITGNAARALGL-EDYGIKVGCPADLVLLDAEDVAEAVAR 384
                        410
                 ....*....|....
gi 446587782 441 ISPRTATFHKGQLV 454
Cdd:cd01293  385 QPPRRVVIRKGRVV 398
Amidohydro_3 pfam07969
Amidohydrolase family;
158-454 1.22e-07

Amidohydrolase family;


Pssm-ID: 400360 [Multi-domain]  Cd Length: 464  Bit Score: 53.69  E-value: 1.22e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  158 LQPYTQERAEKLID--LLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLArrqAGFECEIVAFPQHGLLLSKSEPLMREAM 235
Cdd:pfam07969 141 PPLLAREAEAAAVAaaLAALPGFGITSVDGGGGNVHSLDDYEPLRELTA---AEKLKELLDAPERLGLPHSIYELRIGAM 217
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  236 QAGAHYVGGLDPTSVDGAMEKSLDTMFQ----------IALDYDKGVDIHLHettPAGVAAINYMVETVEKTPQ---LKG 302
Cdd:pfam07969 218 KLFADGVLGSRTAALTEPYFDAPGTGWPdfedealaelVAAARERGLDVAIH---AIGDATIDTALDAFEAVAEklgNQG 294
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  303 KLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHM------------PLKQLHDKGVKVMTGTDS---VIDH 367
Cdd:pfam07969 295 RVRIEHAQGVVPYTYSQIERVAALGGAAGVQPVFDPLWGDWLQdrlgaerargltPVKELLNAGVKVALGSDApvgPFDP 374
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  368 WSPYGLGDMLEKANLYAqLYIRPNEQNLSRSLFLATGDV-LPLNEKGERVWPKAQDDASFVLVDA---SCSAEAVARISP 443
Cdd:pfam07969 375 WPRIGAAVMRQTAGGGE-VLGPDEELSLEEALALYTSGPaKALGLEDRKGTLGVGKDADLVVLDDdplTVDPPAIADIRV 453
                         330
                  ....*....|.
gi 446587782  444 RtATFHKGQLV 454
Cdd:pfam07969 454 R-LTVVDGRVV 463
 
Name Accession Description Interval E-value
PRK06846 PRK06846
putative deaminase; Validated
49-460 0e+00

putative deaminase; Validated


Pssm-ID: 235873 [Multi-domain]  Cd Length: 410  Bit Score: 731.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  49 ITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTF 128
Cdd:PRK06846   1 ITDPHYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQVPDATLPTYDANGLLMLPAFREMHIHLDKTY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 129 YGGPWRSLnRPAgTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQA 208
Cdd:PRK06846  81 YGGPWKAC-RPA-KTIQDRIELEQKELPELLPTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKD 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 209 GFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAIN 288
Cdd:PRK06846 159 GFTYEIVAFPQHGLLRSNSEPLMREAMKMGAHLVGGVDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVATIK 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 289 YMVETVEKTpQLKGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHW 368
Cdd:PRK06846 239 YLVETTEEA-QWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTVPIGRLHMPIPLLHDKGVKVSLGTDSVIDHW 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 369 SPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATF 448
Cdd:PRK06846 318 SPFGTGDMLEKANLLAELYRWSDERSLSRSLALATGGVLPLNDEGERVWPKVGDEASFVLVDASCSAEAVARQSPRTAVF 397
                        410
                 ....*....|..
gi 446587782 449 HKGQLVWGSVAG 460
Cdd:PRK06846 398 HKGQLVAGSLAG 409
Bact_CD cd01293
Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) ...
55-454 1.39e-148

Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.


Pssm-ID: 238618 [Multi-domain]  Cd Length: 398  Bit Score: 428.97  E-value: 1.39e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  55 YLDNVLLETGfdyengvavqtRTARQTVEIQDGKIVALRENKQHPDAtLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWR 134
Cdd:cd01293    1 LLRNARLADG-----------GTALVDIAIEDGRIAAIGPALAVPPD-AEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWP 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 135 SLNRpaGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEI 214
Cdd:cd01293   69 NNSG--GTLLEAIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQI 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 215 VAFPQHGLLLSK-SEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVET 293
Cdd:cd01293  147 VAFPQHGLLSTPgGEELMREALKMGADVVGGIPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSRTLEELAEE 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 294 VEKTPqLKGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIG-------------TLHMPLKQLHDKGVKVMTG 360
Cdd:cd01293  227 AERRG-MQGRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINlylqgredttpkrRGVTPVKELRAAGVNVALG 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 361 TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKgERVWPKAQDDASFVLVDASCSAEAVAR 440
Cdd:cd01293  306 SDNVRDPWYPFGSGDMLEVANLAAHIAQLGTPEDLALALDLITGNAARALGL-EDYGIKVGCPADLVLLDAEDVAEAVAR 384
                        410
                 ....*....|....
gi 446587782 441 ISPRTATFHKGQLV 454
Cdd:cd01293  385 QPPRRVVIRKGRVV 398
PRK05985 PRK05985
cytosine deaminase; Provisional
78-454 1.38e-90

cytosine deaminase; Provisional


Pssm-ID: 180337 [Multi-domain]  Cd Length: 391  Bit Score: 280.67  E-value: 1.38e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  78 ARQTVEIQDGKIVALRENKQHPdATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSlNRPaGTTIQDMIKLEQKMLPE 157
Cdd:PRK05985  15 AAVDILIRDGRIAAIGPALAAP-PGAEVEDGGGALALPGLVDGHIHLDKTFWGDPWYP-NEP-GPSLRERIANERRRRAA 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 158 LQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQnlqAVLARRQA---GFECEIVAFPQHGLLLSK-SEPLMRE 233
Cdd:PRK05985  92 SGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLE---AVLAARETlrgLIDIQIVAFPQSGVLSRPgTAELLDA 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 234 AMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVeKTPQLKGKLTISHAFALA 313
Cdd:PRK05985 169 ALRAGADVVGGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGELGAFQLERIAART-RALGMQGRVAVSHAFCLG 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 314 TLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQ 393
Cdd:PRK05985 248 DLPEREVDRLAERLAEAGVAIMTNAPGSVPVPPVAALRAAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSGFRTDD 327
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446587782 394 NLSRSLFLATG---DVLPLNEKGERVwpkaQDDASFVLVDASCSAEAVARISPRTATFHKGQLV 454
Cdd:PRK05985 328 ELAAALDCVTHggaRALGLEDYGLAV----GARADFVLVDAETVAEAVVAVPVRRLVVRGGRIV 387
PRK07572 PRK07572
cytosine deaminase; Validated
84-454 4.03e-22

cytosine deaminase; Validated


Pssm-ID: 181039  Cd Length: 426  Bit Score: 98.17  E-value: 4.03e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  84 IQDGKIVALRENKQHPDATLphYDAGGKLMLPTTRDMHIHLDKTF-YGGPwrSLNRpAGTTIQDmIKLEQKMLPELqpyT 162
Cdd:PRK07572  22 IAGGRIAAVEPGLQAEAAEE--IDAAGRLVSPPFVDPHFHMDATLsYGLP--RVNA-SGTLLEG-IALWGELKPLL---T 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 163 QE----RAEKLIDLLQSKGTTIARSHCNI-EPvsGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSK-SEPLMREAMQ 236
Cdd:PRK07572  93 QEalveRALRYCDWAVARGLLAIRSHVDVcDP--RLLAVEALLEVRERVAPYLDLQLVAFPQDGVLRSPgAVDNLERALD 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 237 AGAHYVGGL---DPTSVDGAmeKSLDTMFQIALDYDKGVDIHLHETT-PagvaaINYMVETVEKTPQ---LKGKLTISHA 309
Cdd:PRK07572 171 MGVDVVGGIphfERTMADGA--ESVRLLCEIAAERGLRVDMHCDESDdP-----LSRHIETLAAETQrlgLQGRVAGSHL 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 310 FALATLNEQQVDELAHRMAAQQISIastVPIGTLHMPLKQLHDK----------------GVKVMTGTDSVIDHWSPYGL 373
Cdd:PRK07572 244 TSMHSMDNYYVSKLIPLMAEAGVNA---IANPLINITLQGRHDTypkrrgmtrvpelmaaGINVAFGHDCVMDPWYSLGS 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 374 GDMLEKANL---YAQLyirpNEQNLSRSLFLA----TGDVLPLNEKGERVwpkaQDDASFVLVDASCSAEAVaRISP-RT 445
Cdd:PRK07572 321 GDMLEVAHMglhVAQM----TGQDAMRACFDAvtvnPARIMGLEGYGLEP----GCNADLVLLQARDPIEAI-RLRAaRL 391

                 ....*....
gi 446587782 446 ATFHKGQLV 454
Cdd:PRK07572 392 AVIRRGKVI 400
PRK09230 PRK09230
cytosine deaminase; Provisional
69-378 3.41e-18

cytosine deaminase; Provisional


Pssm-ID: 181713  Cd Length: 426  Bit Score: 86.29  E-value: 3.41e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  69 NGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGP--W-----------RS 135
Cdd:PRK09230   9 KNARLPGKEGLWQITIEDGKISAIEPQSEASLEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEpnWnqsgtlfegieRW 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 136 LNRPAGTTIQDMikleqkmlpelqpytQERAEKLIDLLQSKGTTIARSHCNI-EPvsglkNLQNLQAVLARRQAG---FE 211
Cdd:PRK09230  89 AERKALLTHEDV---------------KQRAWQTLKWQIANGIQHVRTHVDVsDP-----TLTALKAMLEVKEEVapwVD 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 212 CEIVAFPQHGLL-LSKSEPLMREAMQAGAHYVGGL---DPTSVDGAmeKSLDTMFQIALDYDKGVDIHLHETTPAGvaai 287
Cdd:PRK09230 149 LQIVAFPQEGILsYPNGEALLEEALRLGADVVGAIphfEFTREYGV--ESLHKAFALAQKYDRLIDVHCDEIDDEQ---- 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 288 NYMVETVEKTP---QLKGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTvPIGTLHMP--------------LKQL 350
Cdd:PRK09230 223 SRFVETVAALAhreGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVAN-PLVNIHLQgrfdtypkrrgitrVKEM 301
                        330       340
                 ....*....|....*....|....*...
gi 446587782 351 HDKGVKVMTGTDSVIDHWSPYGLGDMLE 378
Cdd:PRK09230 302 LEAGINVCFGHDDVFDPWYPLGTANMLQ 329
PRK07583 PRK07583
cytosine deaminase;
82-378 1.15e-09

cytosine deaminase;


Pssm-ID: 236062  Cd Length: 438  Bit Score: 60.00  E-value: 1.15e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  82 VEIQDGKIVALRENKQHPDaTLPHYDAGGKLMLPTTRDMHIHLDKtfyGGPW-RSLNrPAGTTIQdmikleqkmlpELQP 160
Cdd:PRK07583  43 IEIADGKIAAILPAGGAPD-ELPAVDLKGRMVWPCFVDMHTHLDK---GHIWpRSPN-PDGTFPG-----------ALDA 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 161 YTQERAE--KLIDL-------LQSK---GTTIARSHCN-IEPVSG--LKNLQNLQAVLARR---QAgfeceIVAFPQHGL 222
Cdd:PRK07583 107 VTADREAhwSAEDLyrrmefgLRCAyahGTSAIRTHLDsFAPQAAisWEVFAELREAWAGRialQA-----VSLVPLDAY 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 223 LLSKSEPLMREAMQAGAhYVGGLDPTSVDgaMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTpQLKG 302
Cdd:PRK07583 182 LTDAGERLADLVAEAGG-LLGGVTYMNPD--LDAQLDRLFRLARERGLDLDLHVDETGDPASRTLKAVAEAALRN-GFEG 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 303 KLTISHAFALATLNEQQVDELAHRMAAQQISIAStVPIGTLHM---------------PLKQLHDKGVKVMTGTDSVIDH 367
Cdd:PRK07583 258 KVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVS-LPMCNLYLqdrqpgrtprwrgvtLVHELKAAGIPVAVASDNCRDP 336
                        330
                 ....*....|.
gi 446587782 368 WSPYGLGDMLE 378
Cdd:PRK07583 337 FYAYGDHDMLE 347
Amidohydro_3 pfam07969
Amidohydrolase family;
158-454 1.22e-07

Amidohydrolase family;


Pssm-ID: 400360 [Multi-domain]  Cd Length: 464  Bit Score: 53.69  E-value: 1.22e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  158 LQPYTQERAEKLID--LLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLArrqAGFECEIVAFPQHGLLLSKSEPLMREAM 235
Cdd:pfam07969 141 PPLLAREAEAAAVAaaLAALPGFGITSVDGGGGNVHSLDDYEPLRELTA---AEKLKELLDAPERLGLPHSIYELRIGAM 217
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  236 QAGAHYVGGLDPTSVDGAMEKSLDTMFQ----------IALDYDKGVDIHLHettPAGVAAINYMVETVEKTPQ---LKG 302
Cdd:pfam07969 218 KLFADGVLGSRTAALTEPYFDAPGTGWPdfedealaelVAAARERGLDVAIH---AIGDATIDTALDAFEAVAEklgNQG 294
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  303 KLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHM------------PLKQLHDKGVKVMTGTDS---VIDH 367
Cdd:pfam07969 295 RVRIEHAQGVVPYTYSQIERVAALGGAAGVQPVFDPLWGDWLQdrlgaerargltPVKELLNAGVKVALGSDApvgPFDP 374
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  368 WSPYGLGDMLEKANLYAqLYIRPNEQNLSRSLFLATGDV-LPLNEKGERVWPKAQDDASFVLVDA---SCSAEAVARISP 443
Cdd:pfam07969 375 WPRIGAAVMRQTAGGGE-VLGPDEELSLEEALALYTSGPaKALGLEDRKGTLGVGKDADLVVLDDdplTVDPPAIADIRV 453
                         330
                  ....*....|.
gi 446587782  444 RtATFHKGQLV 454
Cdd:pfam07969 454 R-LTVVDGRVV 463
D-HYD cd01314
D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases ...
69-148 9.69e-04

D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.


Pssm-ID: 238639 [Multi-domain]  Cd Length: 447  Bit Score: 41.43  E-value: 9.69e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  69 NGVAVQ-TRTARQTVEIQDGKIVALRENKQhPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGP----WRSLNRPA--- 140
Cdd:cd01314    5 NGTIVTaDGSFKADILIEDGKIVAIGPNLE-APGGVEVIDATGKYVLPGGIDPHTHLELPFMGTVtaddFESGTRAAaag 83

                 ....*....
gi 446587782 141 GTT-IQDMI 148
Cdd:cd01314   84 GTTtIIDFA 92
L-HYD_ALN cd01315
L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the ...
81-147 1.27e-03

L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.


Pssm-ID: 238640 [Multi-domain]  Cd Length: 447  Bit Score: 41.12  E-value: 1.27e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446587782  81 TVEIQDGKIVALRENKQHPDATlPHYDAGGKLMLPTTRDMHIHLD---KTFYGGPW---RSLNRPAGTTIQDM 147
Cdd:cd01315   19 DIAVKGGKIAAIGPDIANTEAE-EVIDAGGLVVMPGLIDTHVHINepgRTEWEGFEtgtKAAAAGGITTIIDM 90
PRK06886 PRK06886
hypothetical protein; Validated
121-376 1.85e-03

hypothetical protein; Validated


Pssm-ID: 180740  Cd Length: 329  Bit Score: 40.20  E-value: 1.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 121 HIHLDKTFyggpwrsLNRPAGTTIQDMIKLEQK--MLPELQP-YTQE----RAEKLIDLLQSKGTTIARSHCNIEPVSGL 193
Cdd:PRK06886  26 HAHADRAF-------TMTPEKIAIYHYANLQQKwdLVDEVKRnSTVEdyyaRFSQAIELMISQGVTAFGTFVDIDPICED 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 194 KNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAgAHYVGGLdPTSVDGAMEKSLDTMfQIALDYDK--G 271
Cdd:PRK06886  99 RAIIAAHKAREVYKHDIILKFANQTLKGVIEPTAKKWFDIGSEM-VDMIGGL-PYRDELDYGRGLEAM-DILLDTAKslG 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 272 VDIHLH---ETTPAGVAAINYMVETVEKTPQlkGKLTISHAFALATLNEQQVDELAHRMAAQQISIAStVPIGTLHM--- 345
Cdd:PRK06886 176 KMVHVHvdqFNTPKEKETEQLCDKTIEHGMQ--GRVVAIHGISIGAHSKEYRYRLYQKMREADMMVIA-CPMAWIDSnrk 252
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 446587782 346 -----------PLKQLHDKGVKVMTGTDSVIDHWSPYGLGDM 376
Cdd:PRK06886 253 edlmpfhnaltPADEMIPEGITVALGTDNICDYMVPLCEGDM 294
PRK08393 PRK08393
N-ethylammeline chlorohydrolase; Provisional
79-387 7.40e-03

N-ethylammeline chlorohydrolase; Provisional


Pssm-ID: 181411 [Multi-domain]  Cd Length: 424  Bit Score: 38.63  E-value: 7.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782  79 RQTVEIQDGKIVALRENKQHPDATLphYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLnrPAGTTIQDMI-KLEQKMLPE 157
Cdd:PRK08393  20 RADVLIEGNKIVEVKRNINKPADTV--IDASGSVVSPGFINAHTHSPMVLLRGLADDV--PLMEWLQNYIwPRERKLKRK 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 158 LQPYTQERAekLIDLLQSKGTTIARSHCNIEPVSglknlqnlqavlarrQAGFECEIVAFPQHGLL----LSKSEPLMRE 233
Cdd:PRK08393  96 DIYWGAYLG--LLEMIKSGTTTFVDMYFHMEEVA---------------KATLEVGLRGYLSYGMVdlgdEEKREKEIKE 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 234 AMQAgAHYVGGLDPTSVDGAMEK------SLDTMFQI---ALDYDKGVDIHLHETTpagvAAINYMVETVEKTPQ----- 299
Cdd:PRK08393 159 TEKL-MEFIEKLNSPRVHFVFGPhapytcSLALLKWVrekAREWNKLITIHLSETM----DEIKQIREKYGKSPVvllde 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446587782 300 ---LKGKLTISHAfalATLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIdhwSPYGLgDM 376
Cdd:PRK08393 234 igfLNEDVIAAHG---VWLSSRDIRILASAGVTVAHNPASNMKLGSGVMPLRKLLNAGVNVALGTDGAA---SNNNL-DM 306
                        330
                 ....*....|.
gi 446587782 377 LEKANLYAQLY 387
Cdd:PRK08393 307 LREMKLAALLH 317
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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