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Conserved domains on  [gi|446559243|ref|WP_000636589|]
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MULTISPECIES: DUF3917 domain-containing protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3917 super family cl16061
Protein of unknown function (DUF3917); This family of proteins is functionally uncharacterized. ...
 18-88 1.23e-23

Protein of unknown function (DUF3917); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.


The actual alignment was detected with superfamily member pfam13055:

Pssm-ID: 432950  Cd Length: 71  Bit Score: 85.36  E-value: 1.23e-23
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446559243  18 MTLKQNGLKRFVPGSILAGIALITYVISIFIESVSVDMSTSLMFIGITLFAGSIMVLMVAGIILFIHMNSE 88
Cdd:pfam13055  1 MTLKQNGLKRFVPGSILAGIALITYVISIFIESVSVDMSTSLMFIGITLFAGSIMVLMVAGIILFIHMNSE 71
 
Name Accession Description Interval E-value
DUF3917 pfam13055
Protein of unknown function (DUF3917); This family of proteins is functionally uncharacterized. ...
 18-88 1.23e-23

Protein of unknown function (DUF3917); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.


Pssm-ID: 432950  Cd Length: 71  Bit Score: 85.36  E-value: 1.23e-23
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446559243  18 MTLKQNGLKRFVPGSILAGIALITYVISIFIESVSVDMSTSLMFIGITLFAGSIMVLMVAGIILFIHMNSE 88
Cdd:pfam13055  1 MTLKQNGLKRFVPGSILAGIALITYVISIFIESVSVDMSTSLMFIGITLFAGSIMVLMVAGIILFIHMNSE 71
 
Name Accession Description Interval E-value
DUF3917 pfam13055
Protein of unknown function (DUF3917); This family of proteins is functionally uncharacterized. ...
 18-88 1.23e-23

Protein of unknown function (DUF3917); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.


Pssm-ID: 432950  Cd Length: 71  Bit Score: 85.36  E-value: 1.23e-23
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446559243  18 MTLKQNGLKRFVPGSILAGIALITYVISIFIESVSVDMSTSLMFIGITLFAGSIMVLMVAGIILFIHMNSE 88
Cdd:pfam13055  1 MTLKQNGLKRFVPGSILAGIALITYVISIFIESVSVDMSTSLMFIGITLFAGSIMVLMVAGIILFIHMNSE 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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