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Conserved domains on  [gi|446539808|ref|WP_000617154|]
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DUF1381 domain-containing protein [Staphylococcus aureus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1381 super family cl06248
Protein of unknown function (DUF1381); This family consists of several hypothetical ...
 1-34 2.90e-05

Protein of unknown function (DUF1381); This family consists of several hypothetical Staphylococcus aureus and Staphylococcus aureus bacteriophage proteins of around 65 residues in length. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam07129:

Pssm-ID: 462097  Cd Length: 44  Bit Score: 37.14  E-value: 2.90e-05
                         10        20        30
                 ....*....|....*....|....*....|....
gi 446539808   1 MIQYLVTTFKDSTGRKHTHITRAKSNQSFTVVEA 34
Cdd:pfam07129  1 MQQLLTTFFDDSGGLHEEFFAAADDNQFFTVEAA 34
 
Name Accession Description Interval E-value
DUF1381 pfam07129
Protein of unknown function (DUF1381); This family consists of several hypothetical ...
 1-34 2.90e-05

Protein of unknown function (DUF1381); This family consists of several hypothetical Staphylococcus aureus and Staphylococcus aureus bacteriophage proteins of around 65 residues in length. The function of this family is unknown.


Pssm-ID: 462097  Cd Length: 44  Bit Score: 37.14  E-value: 2.90e-05
                         10        20        30
                 ....*....|....*....|....*....|....
gi 446539808   1 MIQYLVTTFKDSTGRKHTHITRAKSNQSFTVVEA 34
Cdd:pfam07129  1 MQQLLTTFFDDSGGLHEEFFAAADDNQFFTVEAA 34
 
Name Accession Description Interval E-value
DUF1381 pfam07129
Protein of unknown function (DUF1381); This family consists of several hypothetical ...
 1-34 2.90e-05

Protein of unknown function (DUF1381); This family consists of several hypothetical Staphylococcus aureus and Staphylococcus aureus bacteriophage proteins of around 65 residues in length. The function of this family is unknown.


Pssm-ID: 462097  Cd Length: 44  Bit Score: 37.14  E-value: 2.90e-05
                         10        20        30
                 ....*....|....*....|....*....|....
gi 446539808   1 MIQYLVTTFKDSTGRKHTHITRAKSNQSFTVVEA 34
Cdd:pfam07129  1 MQQLLTTFFDDSGGLHEEFFAAADDNQFFTVEAA 34
DUF1381 pfam07129
Protein of unknown function (DUF1381); This family consists of several hypothetical ...
 2-40 3.19e-04

Protein of unknown function (DUF1381); This family consists of several hypothetical Staphylococcus aureus and Staphylococcus aureus bacteriophage proteins of around 65 residues in length. The function of this family is unknown.


Pssm-ID: 462097  Cd Length: 44  Bit Score: 34.44  E-value: 3.19e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 446539808   2 IQYLVTTFKDSTGRKHTHITRAKSNQSFTVVEAESKEEA 40
Cdd:pfam07129  1 MQQLLTTFFDDSGGLHEEFFAAADDNQFFTVEAAEKEEA 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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