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Conserved domains on  [gi|446453358|ref|WP_000531213|]
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MULTISPECIES: glutathionyl-hydroquinone reductase YqjG [Enterobacteriaceae]

Protein Classification

glutathione S-transferase family protein( domain architecture ID 11418207)

glutathione S-transferase family protein similar to Saccharomyces cerevisiae glutathione S-transferase omega-like proteins and Escherichia coli glutathionyl-hydroquinone reductase

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ECM4 COG0435
Glutathionyl-hydroquinone reductase [Energy production and conversion];
1-328 0e+00

Glutathionyl-hydroquinone reductase [Energy production and conversion];


:

Pssm-ID: 440204 [Multi-domain]  Cd Length: 321  Bit Score: 652.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358   1 MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGptgtggFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEP 80
Cdd:COG0435    1 MGLLVDGKWHDDWYDTKDTGGRFVRQESQFRNWITADGSGG------FPAEAGRYHLYVSLACPWAHRTLIFRALKGLED 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358  81 FISVSVVNPLMLENGWTFDDsFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAF 160
Cdd:COG0435   75 AISVSVVHPLMLEDGWTFSP-DPGATPDPLNGARYLHELYTKADPDYTGRVTVPVLWDKQTGTIVNNESAEIIRMLNSAF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 161 DALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADI 240
Cdd:COG0435  154 DGLAGNDLDLYPEALREEIDALNDRIYDTVNNGVYRAGFATTQEAYEEAVDELFDALDWLEERLSDQRYLCGDRLTEADW 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 241 RLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEP 320
Cdd:COG0435  234 RLFTTLVRFDAVYHGHFKCNRRRIADYPNLWGYLRDLYQLPGVAETVDFDHIKRHYYGSHPTINPTGIVPLGPDLDLDAP 313

                 ....*...
gi 446453358 321 HGRDVRFG 328
Cdd:COG0435  314 HDRDRLGG 321
 
Name Accession Description Interval E-value
ECM4 COG0435
Glutathionyl-hydroquinone reductase [Energy production and conversion];
1-328 0e+00

Glutathionyl-hydroquinone reductase [Energy production and conversion];


Pssm-ID: 440204 [Multi-domain]  Cd Length: 321  Bit Score: 652.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358   1 MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGptgtggFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEP 80
Cdd:COG0435    1 MGLLVDGKWHDDWYDTKDTGGRFVRQESQFRNWITADGSGG------FPAEAGRYHLYVSLACPWAHRTLIFRALKGLED 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358  81 FISVSVVNPLMLENGWTFDDsFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAF 160
Cdd:COG0435   75 AISVSVVHPLMLEDGWTFSP-DPGATPDPLNGARYLHELYTKADPDYTGRVTVPVLWDKQTGTIVNNESAEIIRMLNSAF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 161 DALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADI 240
Cdd:COG0435  154 DGLAGNDLDLYPEALREEIDALNDRIYDTVNNGVYRAGFATTQEAYEEAVDELFDALDWLEERLSDQRYLCGDRLTEADW 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 241 RLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEP 320
Cdd:COG0435  234 RLFTTLVRFDAVYHGHFKCNRRRIADYPNLWGYLRDLYQLPGVAETVDFDHIKRHYYGSHPTINPTGIVPLGPDLDLDAP 313

                 ....*...
gi 446453358 321 HGRDVRFG 328
Cdd:COG0435  314 HDRDRLGG 321
GST_C_Omega_like cd03190
C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione ...
172-313 1.11e-82

C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae Omega-like subfamily; composed of three Saccharomyces cerevisiae GST omega-like (Gto) proteins, Gto1p, Gto2p (also known as Extracellular mutant protein 4 or ECM4p), and Gto3p, as well as similar uncharacterized proteins from fungi and bacteria. The three Saccharomyces cerevisiae Gto proteins are omega-class GSTs with low or no GST activity against standard substrates, but have glutaredoxin/thiol oxidoreductase and dehydroascorbate reductase activity through a single cysteine residue in the active site. Gto1p is located in the peroxisomes while Gto2p and Gto3p are cytosolic. The gene encoding Gto2p, called ECM4, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.


Pssm-ID: 198299 [Multi-domain]  Cd Length: 142  Bit Score: 246.72  E-value: 1.11e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 172 PPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDP 251
Cdd:cd03190    1 PEELRKEIDELNEWIYDNINNGVYKAGFATTQEAYDKAVKELFEALDKLEKRLSKQPYLLGDRLTEADIRLFTTLIRFDP 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446453358 252 VYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGP 313
Cdd:cd03190   81 VYHQHFKCNLKTIRDYPNLWRYLRRLYQNPGVFETTNFDHIKQHYYGSHFPINPNGIVPAGP 142
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
205-268 7.77e-11

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 56.95  E-value: 7.77e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446453358  205 AYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKH-RISDYL 268
Cdd:pfam13410   1 ALERAREQLRAALDALEARLADGPGLLGDRPTLADIALAPVLARLDAAYPGLDLREGYpRLRAWL 65
 
Name Accession Description Interval E-value
ECM4 COG0435
Glutathionyl-hydroquinone reductase [Energy production and conversion];
1-328 0e+00

Glutathionyl-hydroquinone reductase [Energy production and conversion];


Pssm-ID: 440204 [Multi-domain]  Cd Length: 321  Bit Score: 652.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358   1 MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGptgtggFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEP 80
Cdd:COG0435    1 MGLLVDGKWHDDWYDTKDTGGRFVRQESQFRNWITADGSGG------FPAEAGRYHLYVSLACPWAHRTLIFRALKGLED 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358  81 FISVSVVNPLMLENGWTFDDsFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAF 160
Cdd:COG0435   75 AISVSVVHPLMLEDGWTFSP-DPGATPDPLNGARYLHELYTKADPDYTGRVTVPVLWDKQTGTIVNNESAEIIRMLNSAF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 161 DALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADI 240
Cdd:COG0435  154 DGLAGNDLDLYPEALREEIDALNDRIYDTVNNGVYRAGFATTQEAYEEAVDELFDALDWLEERLSDQRYLCGDRLTEADW 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 241 RLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEP 320
Cdd:COG0435  234 RLFTTLVRFDAVYHGHFKCNRRRIADYPNLWGYLRDLYQLPGVAETVDFDHIKRHYYGSHPTINPTGIVPLGPDLDLDAP 313

                 ....*...
gi 446453358 321 HGRDVRFG 328
Cdd:COG0435  314 HDRDRLGG 321
GST_C_Omega_like cd03190
C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione ...
172-313 1.11e-82

C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae Omega-like subfamily; composed of three Saccharomyces cerevisiae GST omega-like (Gto) proteins, Gto1p, Gto2p (also known as Extracellular mutant protein 4 or ECM4p), and Gto3p, as well as similar uncharacterized proteins from fungi and bacteria. The three Saccharomyces cerevisiae Gto proteins are omega-class GSTs with low or no GST activity against standard substrates, but have glutaredoxin/thiol oxidoreductase and dehydroascorbate reductase activity through a single cysteine residue in the active site. Gto1p is located in the peroxisomes while Gto2p and Gto3p are cytosolic. The gene encoding Gto2p, called ECM4, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.


Pssm-ID: 198299 [Multi-domain]  Cd Length: 142  Bit Score: 246.72  E-value: 1.11e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 172 PPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDP 251
Cdd:cd03190    1 PEELRKEIDELNEWIYDNINNGVYKAGFATTQEAYDKAVKELFEALDKLEKRLSKQPYLLGDRLTEADIRLFTTLIRFDP 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446453358 252 VYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGP 313
Cdd:cd03190   81 VYHQHFKCNLKTIRDYPNLWRYLRRLYQNPGVFETTNFDHIKQHYYGSHFPINPNGIVPAGP 142
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
205-268 7.77e-11

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 56.95  E-value: 7.77e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446453358  205 AYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKH-RISDYL 268
Cdd:pfam13410   1 ALERAREQLRAALDALEARLADGPGLLGDRPTLADIALAPVLARLDAAYPGLDLREGYpRLRAWL 65
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
62-159 6.65e-09

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 51.86  E-value: 6.65e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358   62 ACPWAHRTLIMRKLKGLePFIsVSVVNPLMLENGWTFDDsfpgatgdtlyqneflyqlylhadphYSGRVTVPVLWDKKN 141
Cdd:pfam13409   1 FSPFSHRVRLALEEKGL-PYE-IELVDLDPKDKPPELLA--------------------------LNPLGTVPVLVLPDG 52
                          90
                  ....*....|....*...
gi 446453358  142 HTIvsNESAEIIRMFNTA 159
Cdd:pfam13409  53 TVL--TDSLVILEYLEEL 68
GST_C_family cd00299
C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione ...
179-269 7.29e-09

C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.


Pssm-ID: 198286 [Multi-domain]  Cd Length: 100  Bit Score: 52.50  E-value: 7.29e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 179 IDELNGWIYDTVNNGVYKAGFA------TSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPV 252
Cdd:cd00299    1 VRALEDWADATLAPPLVRLLYLekvplpKDEAAVEAAREELPALLAALEQLLAGRPYLAGDQFSLADVALAPVLARLEAL 80
                         90
                 ....*....|....*...
gi 446453358 253 YVTHFKCDKH-RISDYLN 269
Cdd:cd00299   81 GPYYDLLDEYpRLKAWYD 98
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
57-287 5.50e-08

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 52.21  E-value: 5.50e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358  57 LYVSLACPWAHRTLIMRKLKGLePFISVSVvnplmlengwtfdDSFPGATGDTlyqnEFLyqlylhadpHYSGRVTVPVL 136
Cdd:COG0625    4 LYGSPPSPNSRRVRIALEEKGL-PYELVPV-------------DLAKGEQKSP----EFL---------ALNPLGKVPVL 56
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 137 WDkkNHTIVSnESAEIIRMFNTAFDALGAKAGDyypPALQTKIDELNGW----IYDTVNNGVYKAGFATSQEAYDEAVAK 212
Cdd:COG0625   57 VD--DGLVLT-ESLAILEYLAERYPEPPLLPAD---PAARARVRQWLAWadgdLHPALRNLLERLAPEKDPAAIARARAE 130
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446453358 213 VFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDpvyvtHFKCDkhrISDYLNLYGFLRDIYQMPGIAETV 287
Cdd:COG0625  131 LARLLAVLEARLAGGPYLAGDRFSIADIALAPVLRRLD-----RLGLD---LADYPNLAAWLARLAARPAFQRAL 197
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
195-240 4.24e-05

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 41.50  E-value: 4.24e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 446453358  195 YKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADI 240
Cdd:pfam00043  13 YVPPEEKKEPEVDEALEKVARVLSALEEVLKGQTYLVGDKLTLADI 58
GST_C_3 pfam14497
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
203-285 1.14e-04

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 464190 [Multi-domain]  Cd Length: 104  Bit Score: 40.62  E-value: 1.14e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358  203 QEAYDEAVAKVfesLARLEQILGQH--RYLTGNQLTEADIRLwttlvrFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQM 280
Cdd:pfam14497  24 KEFREERLPKF---LGYFEKVLNKNggGYLVGDKLTYADLAL------FQVLDGLLYPKAPDALDKYPKLKALHERVAAR 94

                  ....*
gi 446453358  281 PGIAE 285
Cdd:pfam14497  95 PNIKA 99
GST_C_Delta_Epsilon cd03177
C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; ...
194-250 4.20e-04

C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 198287 [Multi-domain]  Cd Length: 117  Bit Score: 39.44  E-value: 4.20e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446453358 194 VYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFD 250
Cdd:cd03177   24 YYYPILFGGAEPPEEKLDKLEEALEFLETFLEGSDYVAGDQLTIADLSLVATVSTLE 80
GST_C_Beta cd03188
C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione ...
190-285 9.23e-04

C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they are involved in the protection against oxidative stress and are able to bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs, contributing to antibiotic resistance. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH. One member of this subfamily is a GST from Burkholderia xenovorans LB400 that is encoded by the bphK gene and is part of the biphenyl catabolic pathway.


Pssm-ID: 198297 [Multi-domain]  Cd Length: 113  Bit Score: 38.38  E-value: 9.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 190 VNNGVYKAGFA-------TSQEAYDE----AVAKVFESLARLEQILGQHRYLTGNQLTEADIRL-----WTTLVRFDPvy 253
Cdd:cd03188   13 IASELHKAFGPlfyparwADDALAEEvkaaARERLERRLAYLDAQLAGGPYLLGDQFSVADAYLfvvlrWARAVGLDL-- 90
                         90       100       110
                 ....*....|....*....|....*....|..
gi 446453358 254 vthfkcdkhriSDYLNLYGFLRDIYQMPGIAE 285
Cdd:cd03188   91 -----------SDWPHLAAYLARVAARPAVQA 111
GST_C_Mu cd03209
C-terminal, alpha helical domain of Class Mu Glutathione S-transferases; Glutathione ...
210-303 5.64e-03

C-terminal, alpha helical domain of Class Mu Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases including cancer and neurodegenerative disorders. Some isoenzymes have additional specific functions. Human GST M1-1 acts as an endogenous inhibitor of ASK1 (apoptosis signal-regulating kinase 1) thereby suppressing ASK1-mediated cell death. Human GSTM2-2 and 3-3 have been identified as prostaglandin E2 synthases in the brain and may play crucial roles in temperature and sleep-wake regulation.


Pssm-ID: 198318 [Multi-domain]  Cd Length: 121  Bit Score: 36.46  E-value: 5.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446453358 210 VAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVR---FDPVYVTHFKcdkhrisdylNLYGFLRDIYQMPGIAEt 286
Cdd:cd03209   37 LEKLPDKLKLFSEFLGDRPWFAGDKITYVDFLLYEALDQhriFEPDCLDAFP----------NLKDFLERFEALPKISA- 105
                         90
                 ....*....|....*..
gi 446453358 287 vnfdhirnhYFRSHKTI 303
Cdd:cd03209  106 ---------YMKSDRFI 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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