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Conserved domains on  [gi|446431680|ref|WP_000509535|]
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hypothetical protein [Escherichia coli]

Protein Classification

NAD(P)-binding domain-containing protein( domain architecture ID 708297)

NAD(P)-binding domain-containing protein may function as an oxidoreductase; similar to Rattus norvegicus metalloreductase STEAP4, an integral membrane protein that functions as NADPH-dependent ferric-chelate reductase

Gene Ontology:  GO:0030554
PubMed:  8749365

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
COG2085 super family cl28110
Predicted dinucleotide-binding enzyme [General function prediction only];
23-64 3.02e-05

Predicted dinucleotide-binding enzyme [General function prediction only];


The actual alignment was detected with superfamily member COG2085:

Pssm-ID: 441688 [Multi-domain]  Cd Length: 205  Bit Score: 40.54  E-value: 3.02e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 446431680  23 VNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFPL 64
Cdd:COG2085  163 IEDLGFDPVDAGPLANARRLEPLTPLLINLARTAGLELGFRL 204
 
Name Accession Description Interval E-value
COG2085 COG2085
Predicted dinucleotide-binding enzyme [General function prediction only];
23-64 3.02e-05

Predicted dinucleotide-binding enzyme [General function prediction only];


Pssm-ID: 441688 [Multi-domain]  Cd Length: 205  Bit Score: 40.54  E-value: 3.02e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 446431680  23 VNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFPL 64
Cdd:COG2085  163 IEDLGFDPVDAGPLANARRLEPLTPLLINLARTAGLELGFRL 204
 
Name Accession Description Interval E-value
COG2085 COG2085
Predicted dinucleotide-binding enzyme [General function prediction only];
23-64 3.02e-05

Predicted dinucleotide-binding enzyme [General function prediction only];


Pssm-ID: 441688 [Multi-domain]  Cd Length: 205  Bit Score: 40.54  E-value: 3.02e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 446431680  23 VNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFPL 64
Cdd:COG2085  163 IEDLGFDPVDAGPLANARRLEPLTPLLINLARTAGLELGFRL 204
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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