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Conserved domains on  [gi|446334516|ref|WP_000412371|]
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amino acid permease [Escherichia coli]

Protein Classification

amino acid permease( domain architecture ID 11489946)

amino acid permease facilitates the transport of amino acids; similar to Escherichia coli arginine/ornithine antiporter that catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
 3-460 0e+00

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


:

Pssm-ID: 129983  Cd Length: 473  Bit Score: 552.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516    3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGEL 82
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREGFGPY 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   83 IGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDtpelrLFGDGNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLA 162
Cdd:TIGR00905  87 IGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFP-----LFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  163 KLLPLGLFVVLAMMMFKLDTFKLDFTGLALGV--PVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLS 240
Cdd:TIGR00905 162 KLIPLFLFIIIGWFWFKLDLFTADFWGHDVPSlgSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATVLGTLG 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  241 ALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRI 320
Cdd:TIGR00905 242 ALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  321 FARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIAT--------RPLHKAVGVG 392
Cdd:TIGR00905 322 FGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKvgtypkikNRKALIVGVI 401

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446334516  393 ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHdNVLNRQEMVLIGMLLIASVPATWMLVG 460
Cdd:TIGR00905 402 ACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKERGK-HVFNKKEILIATIIVIAAIIAIWLLVN 468
 
Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
 3-460 0e+00

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 552.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516    3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGEL 82
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREGFGPY 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   83 IGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDtpelrLFGDGNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLA 162
Cdd:TIGR00905  87 IGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFP-----LFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  163 KLLPLGLFVVLAMMMFKLDTFKLDFTGLALGV--PVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLS 240
Cdd:TIGR00905 162 KLIPLFLFIIIGWFWFKLDLFTADFWGHDVPSlgSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATVLGTLG 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  241 ALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRI 320
Cdd:TIGR00905 242 ALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  321 FARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIAT--------RPLHKAVGVG 392
Cdd:TIGR00905 322 FGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKvgtypkikNRKALIVGVI 401

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446334516  393 ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHdNVLNRQEMVLIGMLLIASVPATWMLVG 460
Cdd:TIGR00905 402 ACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKERGK-HVFNKKEILIATIIVIAAIIAIWLLVN 468
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-433 1.14e-61

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 206.67  E-value: 1.14e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   1 MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLiGWGITGAGILLLAFAMLILTRIRPElDGGIFTYAREGFG 80
Cdd:COG0531    9 LKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAIL-AWLIAGLLALLVALSYAELASAFPR-AGGAYTYARRALG 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  81 ELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPelrlfgdgntwQSILGASTLLWIVHFLILRGVQTAASINLVAT 160
Cdd:COG0531   87 PLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAG-----------GSVLIALVLILLLTLLNLRGVKESAKVNNILT 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 161 LAKLLPLGLFVVLAMMMFKLDTFkldfTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKATLLAVL 239
Cdd:COG0531  156 VLKLLVLLLFIVVGLFAFDPANF----TPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNpKRNIPRAIILSLL 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 240 SALGVYLLVTLLSLGVVARPELAEIRNPsMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPR 319
Cdd:COG0531  232 IVGVLYILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPK 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 320 IFARQNAQ-AAPSASLWLTNIcvqICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLH---------KAV 389
Cdd:COG0531  311 VFAKVHPRfGTPVNAILLTGV---IALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDlprpfrvplPLI 387

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 446334516 390 GVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHD 433
Cdd:COG0531  388 PILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKL 431
AA_permease_2 pfam13520
Amino acid permease;
5-387 1.04e-52

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 182.90  E-value: 1.04e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516    5 LGLSALTALVLSSMLGAGVFslPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPeLDGGIFTYAREGFGELIG 84
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIF--VAPLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALP-RSGGIYVYLENAFGKFVA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   85 FCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPelrlfGDGNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLAKL 164
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPD-----LVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKL 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  165 -LPLGLFVVLAMMMFKLDTFKLDFTGLALGVP-VWEQVKNTMLITLWVFIGVEGAVVVSARARNkRDVGKATLLAVLSAL 242
Cdd:pfam13520 153 lLPLILIIILGLVTADGGGFNLLSGEWHTFFPdGWPGVFAGFLGVLWSFTGFESAANVSEEVKK-RNVPKAIFIGVIIVG 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  243 GVYLLVTLLSLGVVARPELAEIRN-PSMAGLMVEMMG-PWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFP-- 318
Cdd:pfam13520 232 VLYILVNIAFFGVVPDDEIALSSGlGQVAALLFQAVGgKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfs 311

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446334516  319 RIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHK 387
Cdd:pfam13520 312 RFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDL 380
PRK10644 PRK10644
arginine/agmatine antiporter;
3-405 7.86e-33

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 129.14  E-value: 7.86e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAalLIGWGITGAGILLLAFAMLILTRIRPElDGGIFTYAREGFGEL 82
Cdd:PRK10644   8 HKVGLIPVTLMVAGNIMGSGVFLLPANLASTGGIA--IYGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYARRCFGPF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  83 IGFCSAWGYWLCAVIANVSYLVIVFSALSFFtdTPELRlfgdgNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLA 162
Cdd:PRK10644  85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYF--FPILK-----DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVL 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 163 KLLPLGLFVVLAMMMFKLDTFKLDFTglALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKATLLAVLSA 241
Cdd:PRK10644 158 ALIPIVGIAVFGWFWFRGETYMAAWN--VSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNpKRNVPIATIGGVLIA 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 242 LGVYLLVTLLSLGVVARPELAEIRNPsMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIF 321
Cdd:PRK10644 236 AVCYVLSSTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIF 314

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 322 ARQNAQAAPSASLWLTNICVQICLV--LIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATR------PLHKAVGVGA 393
Cdd:PRK10644 315 ARVNKAGTPVAGLLIVGVLMTIFQLssISPNASKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGhfgkarPAYLAVTLIA 394

                        410
                 ....*....|..
gi 446334516 394 CIYGLWLLYASG 405
Cdd:PRK10644 395 FVYCIWAVVGSG 406
 
Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
 3-460 0e+00

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 552.74  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516    3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGEL 82
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREGFGPY 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   83 IGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDtpelrLFGDGNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLA 162
Cdd:TIGR00905  87 IGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFP-----LFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  163 KLLPLGLFVVLAMMMFKLDTFKLDFTGLALGV--PVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLS 240
Cdd:TIGR00905 162 KLIPLFLFIIIGWFWFKLDLFTADFWGHDVPSlgSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATVLGTLG 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  241 ALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRI 320
Cdd:TIGR00905 242 ALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  321 FARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIAT--------RPLHKAVGVG 392
Cdd:TIGR00905 322 FGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKvgtypkikNRKALIVGVI 401

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446334516  393 ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHdNVLNRQEMVLIGMLLIASVPATWMLVG 460
Cdd:TIGR00905 402 ACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKERGK-HVFNKKEILIATIIVIAAIIAIWLLVN 468
arg_ornith_anti TIGR03810
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
 3-459 2.42e-157

arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 163522  Cd Length: 468  Bit Score: 453.74  E-value: 2.42e-157
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516    3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGEL 82
Cdd:TIGR03810   1 KKLGLGALTALVVGSMIGSGIFSLPSDMAAGAAAGAVLIGWVITGVGMLALAFSFQNLANKKPELDGGVYSYAKAGFGPF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   83 IGFCSAWGYWLCAVIANVSYLVIVFSALSFFtdtpeLRLFGDGNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLA 162
Cdd:TIGR03810  81 MGFISAWGYWLSAWLGNVAYATLLFSTLGYF-----FPIFGGGNNPPSIIGASVLLWCVHFLVLRGVEGAAFINTITTIA 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  163 KLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVP----VWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAV 238
Cdd:TIGR03810 156 KLVPLFVFIVIGIFAFKGDTFTNDFWGNANGGFslgsVMTQVKNMMLVTVWVFIGIEGASMLSARAEKRSDVGKATVIGL 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  239 LSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFP 318
Cdd:TIGR03810 236 IGVLAIYVLVSVLSYGIMTQAQLAGLKNPSMAYVLEHMVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMP 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  319 RIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKA-------VGV 391
Cdd:TIGR03810 316 KYFGKENANGAPTNALWLTNGLIQIFLLTTLFSEQAYNFAISLATSAILVPYLWSAAYQVKLSWRGGQERgrrkqllIGL 395

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446334516  392 GACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHdNVLNRQEMVLIGMLLIASVPATWMLV 459
Cdd:TIGR03810 396 VALLYAVWLIYAAGLKYLLLSAILYAPGIYFYARARKEKGG-PVFTKGELLIFAAIVAGAVIAIYLLA 462
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-433 1.14e-61

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 206.67  E-value: 1.14e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   1 MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLiGWGITGAGILLLAFAMLILTRIRPElDGGIFTYAREGFG 80
Cdd:COG0531    9 LKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAIL-AWLIAGLLALLVALSYAELASAFPR-AGGAYTYARRALG 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  81 ELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPelrlfgdgntwQSILGASTLLWIVHFLILRGVQTAASINLVAT 160
Cdd:COG0531   87 PLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAG-----------GSVLIALVLILLLTLLNLRGVKESAKVNNILT 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 161 LAKLLPLGLFVVLAMMMFKLDTFkldfTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKATLLAVL 239
Cdd:COG0531  156 VLKLLVLLLFIVVGLFAFDPANF----TPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNpKRNIPRAIILSLL 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 240 SALGVYLLVTLLSLGVVARPELAEIRNPsMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPR 319
Cdd:COG0531  232 IVGVLYILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPK 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 320 IFARQNAQ-AAPSASLWLTNIcvqICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLH---------KAV 389
Cdd:COG0531  311 VFAKVHPRfGTPVNAILLTGV---IALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDlprpfrvplPLI 387

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 446334516 390 GVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHD 433
Cdd:COG0531  388 PILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKL 431
AA_permease_2 pfam13520
Amino acid permease;
5-387 1.04e-52

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 182.90  E-value: 1.04e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516    5 LGLSALTALVLSSMLGAGVFslPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPeLDGGIFTYAREGFGELIG 84
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIF--VAPLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALP-RSGGIYVYLENAFGKFVA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   85 FCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPelrlfGDGNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLAKL 164
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPD-----LVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKL 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  165 -LPLGLFVVLAMMMFKLDTFKLDFTGLALGVP-VWEQVKNTMLITLWVFIGVEGAVVVSARARNkRDVGKATLLAVLSAL 242
Cdd:pfam13520 153 lLPLILIIILGLVTADGGGFNLLSGEWHTFFPdGWPGVFAGFLGVLWSFTGFESAANVSEEVKK-RNVPKAIFIGVIIVG 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  243 GVYLLVTLLSLGVVARPELAEIRN-PSMAGLMVEMMG-PWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFP-- 318
Cdd:pfam13520 232 VLYILVNIAFFGVVPDDEIALSSGlGQVAALLFQAVGgKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfs 311

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446334516  319 RIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHK 387
Cdd:pfam13520 312 RFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDL 380
PRK10644 PRK10644
arginine/agmatine antiporter;
3-405 7.86e-33

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 129.14  E-value: 7.86e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAalLIGWGITGAGILLLAFAMLILTRIRPElDGGIFTYAREGFGEL 82
Cdd:PRK10644   8 HKVGLIPVTLMVAGNIMGSGVFLLPANLASTGGIA--IYGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYARRCFGPF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  83 IGFCSAWGYWLCAVIANVSYLVIVFSALSFFtdTPELRlfgdgNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLA 162
Cdd:PRK10644  85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYF--FPILK-----DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVL 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 163 KLLPLGLFVVLAMMMFKLDTFKLDFTglALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKATLLAVLSA 241
Cdd:PRK10644 158 ALIPIVGIAVFGWFWFRGETYMAAWN--VSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNpKRNVPIATIGGVLIA 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 242 LGVYLLVTLLSLGVVARPELAEIRNPsMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIF 321
Cdd:PRK10644 236 AVCYVLSSTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIF 314

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 322 ARQNAQAAPSASLWLTNICVQICLV--LIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATR------PLHKAVGVGA 393
Cdd:PRK10644 315 ARVNKAGTPVAGLLIVGVLMTIFQLssISPNASKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGhfgkarPAYLAVTLIA 394

                        410
                 ....*....|..
gi 446334516 394 CIYGLWLLYASG 405
Cdd:PRK10644 395 FVYCIWAVVGSG 406
potE PRK10655
putrescine transporter; Provisional
 3-423 5.85e-30

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 120.91  E-value: 5.85e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAalLIGWGITGAGILLLAFAMLILTRIRPElDGGIFTYAREGFGEL 82
Cdd:PRK10655   6 NKMGVVQLTILTAVNMMGSGIIMLPTKLAQVGTIS--ILSWLVTAVGSMALAYAFAKCGMFSRK-SGGMGGYAEYAFGKS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  83 IGFCSAWGYWLCAVIANVSylvIVFSALSFFTDtpelrLFGDGNT-WQSILGASTLLWIVHFLILRGVQTAASINLVATL 161
Cdd:PRK10655  83 GNFMANYTYGVSLLIANVA---IAISAVGYGTE-----LFGATLSpVQICLATIGVLWLCTVANFGGARITGQISSVTVW 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 162 AKLLPLGLFVVLAMMMFKLDTFKLDFTglALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKATLLAVLS 240
Cdd:PRK10655 155 GVIIPVVGLSIIGWFWFSPSLYVAAWN--PHHLPFFSAVGSSIAMTLWAFLGLESACANSDAVENpERNVPIAVLGGTLG 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 241 ALGVYLLVTLLSLGVVARPELAEIRNPsMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRI 320
Cdd:PRK10655 233 AAVIYIVSTNVIAGIVPNMELANSTAP-FGLAFAQMFNPTVGKIVMALMVMSCCGSLLGWQFTIAQVFKSSADEGYFPKI 311

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 321 FARQNAQAAPSASLwLTNICVQICLVLIWLTGS---DYNTLLTIASEMILVPYFLVGAFLL---KIATRPLHKA-----V 389
Cdd:PRK10655 312 FSRVTKVDAPVQGM-LIIVVIQSLLSLMTISPSlnsQFNVLVNLAVVTNIIPYILSMAALViiqKVANVPPSKAkvanfI 390

                        410       420       430
                 ....*....|....*....|....*....|....
gi 446334516 390 GVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVF 423
Cdd:PRK10655 391 AFVGALYSFYALYSSGEEAMLYGSIVTFLGWTLY 424
cadB PRK10435
cadaverine/lysine antiporter;
3-434 1.00e-18

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 87.88  E-value: 1.00e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAalLIGWGITGAGILLLAFAMLILTRIRPElDGGIFTYAREgFGEL 82
Cdd:PRK10435   5 KKIGLFACTGVVAGNMMGSGIALLPANLASIGSIA--IWGWIISIIGAMSLAYVYARLATKNPQ-QGGPIAYAGE-ISPA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  83 IGFCSAWGYW-------LCAVIANVSYLVIVFSALSfftdtpelrlfgdgNTWQSILGASTLLWIVHFLILRGVQTAASI 155
Cdd:PRK10435  81 FGFQTGVLYYhanwignLAIGITAVSYLSTFFPVLN--------------DPIPAGIACIAIVWVFTFVNMLGGTWVSRL 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 156 NLVATLAKLLPLGLFVVLAMMMFKLDTFKLDFTglALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKAT 234
Cdd:PRK10435 147 TTIGLVLVLIPVVGTAIVGWHWFDAATYAANWN--TSDTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNpKRTVPLAT 224

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 235 LLAVLSALGVYLLVTLLSLGVVARPELAEIRNPsMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATH 314
Cdd:PRK10435 225 MLGTGLAGIIYIAATQVISGMFPASVMAASGAP-FAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAAND 303

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 315 KAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSD-------YNTLLTIASEMILVPYFLVGAFLLKIATRPLHK 387
Cdd:PRK10435 304 GNFPKVYGEVDKNGIPKKGLLLAAVKMTALMILITLMNSSggkasdlFGELTGIAVLLTMLPYFYSCVDLIRFEGVNIRN 383

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 446334516 388 AVGVGACIYGLWLLYA--SGPMHLLLSVVLYAPGLLVFLYARKTHTHDN 434
Cdd:PRK10435 384 FVSLICSVLGCVFCFIalMGASSFELAGTFIVSLIILMFYARKMHERQS 432
PRK11021 PRK11021
putative transporter; Provisional
 5-430 3.12e-12

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 68.01  E-value: 3.12e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   5 LGLSALTALVLSSMLGAGVFSLPQnMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELdGGIFTYAREGFGELIG 84
Cdd:PRK11021   1 LGLWQGIGLLSTSLLGTGVFAVPA-LAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHA-GGPAHFVGMAFGPRLG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  85 FCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPElrlfgdgntWQSILGASTLLWIVHFLILRGVQTAASINLVATLAkl 164
Cdd:PRK11021  79 RVTGWLFLSVIPVGLPAALQIAAGFGQALFGWSS---------WQLLLAELLTLALLWLLNLRGASSSANLQTVIALL-- 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 165 lplgLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKATLLAVLSALG 243
Cdd:PRK11021 148 ----IVALVVAIWWAGDIKPADIPFPAPGSIEWSGLFAALGVMFWCFVGIEAFAHLASEFKNpERDFPRALMIGLLLAGL 223

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 244 VYLLVTLLSLGVVARPElAEIRNPSMAGLMVEMMGPWGEIIIAaglIVSVCGAYLSWTIMAAEVPFLA---ATHKAFPRI 320
Cdd:PRK11021 224 VYWACTVVVLHFPAYGD-KQAAAASLPGIFVQLFGGYALWVIC---VIGYLACFASVNIYTQSFARLVwsqAREGRPPSY 299

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 321 FARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYF---LVGAFLLKIATRPLhKAVGVGACIYg 397
Cdd:PRK11021 300 LARLSARGVPVNALNAVLGCCAVSILLIYALGLNLEALIAYANGIFVLIYLlcmLAACKLLKGRYRPL-AVLGCLLCLL- 377

                        410       420       430
                 ....*....|....*....|....*....|...
gi 446334516 398 lwLLYASGpMHLLLSVVLYApGLLVFLYARKTH 430
Cdd:PRK11021 378 --LLVMLG-WKMLYALIMLA-LLWLFLPKRKTH 406
frlA PRK11357
amino acid permease;
1-428 2.94e-10

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 62.18  E-value: 2.94e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   1 MEKKLGLSALTALVLSSMLGAGVF-SLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPElDGGIFTYAREGF 79
Cdd:PRK11357   6 LQRKLGFWAVLAIAVGTTVGSGIFvSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPE-NGADYVYLKNAG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  80 GELIGFCSAWGYWLCAVIANVSYLVI-VFSALSFFTdtpelrlfgdgnTWQSILG---ASTLLWIVHFLILRGVQTAASI 155
Cdd:PRK11357  85 SRPLAFLSGWASFWANDAPSLSIMALaIVSNLGFLT------------PIDPLLGkfiAAGLIIAFMLLHLRSVEGGAAF 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 156 NLVATLAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKAT 234
Cdd:PRK11357 153 QTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNpGKTMPRAL 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 235 LLAVLSALGVYLLVTLLSLGVVARPELAEIRNP-SMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAAT 313
Cdd:PRK11357 233 IGSCLLVLVLYTLLALVISGLMPFDKLANSETPiSDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAK 312

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516 314 HKAFPRIFARQNaqaaPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLV-GAF-----------LLKIA 381
Cdd:PRK11357 313 DNLFFKCFGHVH----PKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTfGSIiwcrkrddykpLWRTP 388

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 446334516 382 TRPLHKAVGVGACIYGLWLLYASGPMH-LLLSVVLYAPGLLVFLYARK 428
Cdd:PRK11357 389 AFGLMTTLAIASSLILVASTFVWAPIPgLICAVIVIATGLPAYAFWAK 436
Spore_permease pfam03845
Spore germination protein;
10-255 2.00e-07

Spore germination protein;


Pssm-ID: 281794  Cd Length: 321  Bit Score: 52.64  E-value: 2.00e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   10 LTALVLSSMLGAGVFSLPQNMAAVASPAALlIGWGITGAGILLLAFAMLILTRIRPEldGGIFTYAREGFGELIGfcsaw 89
Cdd:pfam03845   7 TFFLIVSFQLGSGILTLPRSVAEQAGPDGW-ISVLLAGIIGLILVYLYYYLLKKFPE--KTLIEYMKKILGKWLG----- 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   90 gyWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSILgasTLLWIVHFLILRGVQTAASINLVatlakLLPLGL 169
Cdd:pfam03845  79 --SLLSILFMLYFLYIAGRVLRIFSEVIQFFLLPDTPTWIIIL---TLLLVSLYLISKGIEVLAREFCF-----IIPILL 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  170 FVVLAMMMFKLDTFKLDFTGLALG---VPVWEQVKNTMLitlwVFIGVEGAVVVSARARNKRDVGKATLLAVLSALGVYL 246
Cdd:pfam03845 149 IILLLILLFSLKIAHIDNLRPVLGngiSPVLKGLKVTSL----PFGGFEILLMLYPFMKDKKKSKKAALLGVGISGLLYT 224


                  ....*....
gi 446334516  247 LVTLLSLGV 255
Cdd:pfam03845 225 LTTIIVIGV 233
AA_permease pfam00324
Amino acid permease;
15-362 1.89e-06

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 50.01  E-value: 1.89e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   15 LSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPeLDGGIFTYAREGFGELIGFCSAWGYWL- 93
Cdd:pfam00324   7 LGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGP-VSGGFYTYASRFLGPSLGFATGWNYWLs 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   94 -CAVIAN-VSYLVIVFSALSFFTDTPELrlfgdgntWQSILGASTLLWIVHFLilrGVQTAASINLVATLAKLLPLGLFV 171
Cdd:pfam00324  86 wITVLALeLTAASILIQFWELVPDIPYL--------WVWGAVFLVLLTIINLV---GVKWYGEAEFWFALIKIIAIIGFI 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  172 VLAMMMFKLDTFKLDFTGLALGVPVWEQ---------VKNTMLITLWVFIGVEGAVVVSARARN-KRDVGKATLLAVLSA 241
Cdd:pfam00324 155 IVGIILLSGGNPNDGAIFRYLGDNGGKNnfppgfgkgFISVFVIAFFAFTGIELVGIAAGEVKNpEKSIPKAILQVIWRI 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  242 LGVYLLVTLLSLGVVARP-----ELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKA 316
Cdd:pfam00324 235 TIFYILSLLAIGLLVPWNdpgllNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGL 314

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 446334516  317 FPRIFARQNAQAAPSASLWLTNICVQICLVLIWL-TGSDYNTLLTIA 362
Cdd:pfam00324 315 APKFLKKVDKRGVPLRAILVSMVISLLALLLASLnPAIVFNFLLAIS 361
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 3-251 1.10e-03

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 41.12  E-value: 1.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516    3 KKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGEL 82
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFATYASRFVDPA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   83 IGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTpelrlfgdGNTWQSILGASTLLWIVHFLilrGVQTAASINLVATLA 162
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDK--------VNPAVWIAIFYVFIVIINLF---GVKGYGEAEFWFSSI 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  163 KLLPLGLFVVLAMMM---------------------FKLDTFKLDFTGLAlgvpvweqvkNTMLITLWVFIGVEGAVVVS 221
Cdd:TIGR00913 151 KILAIIGFIILSIILncgggpnhgyigfrywhdpgaFAGGTIGGRFKGVC----------SVFVTAAFSFGGTELVALTA 220

                         250       260       270
                  ....*....|....*....|....*....|.
gi 446334516  222 ARARNKRD-VGKATLLAVLSALGVYLLVTLL 251
Cdd:TIGR00913 221 GEAANPRKsIPRAAKRTFWRILVFYILTLFL 251
Trp_Tyr_perm pfam03222
Tryptophan/tyrosine permease family;
13-264 5.22e-03

Tryptophan/tyrosine permease family;


Pssm-ID: 367404  Cd Length: 393  Bit Score: 39.19  E-value: 5.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   13 LVLSSMLGAGVFSLPQNMAAVASPAALLIgwgITGAGILLLAFAMLILTRI-RPELDGGIFTYAREGFGeligfcSAWGY 91
Cdd:pfam03222  11 IIAGTAIGAGMLALPVATAGAGFIPSLLL---LILSWFLMLASGLLLLEVYlWYPEGASFNTLAKDLLG------KKGNI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516   92 WLCAVIANVSYLVIVfsalSFFTDTPEL--RLFGDGNTWQSILGASTLLWIVHFLILRGVQTAASINLVATLAKLLPLGL 169
Cdd:pfam03222  82 IAGLVYAFLLYILTY----AYISGGGSIlsRVIPEMFGIPWSARAAPLIFTLLFGPFVWAGTKAVDRINRVLIFGKIIAF 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446334516  170 FVVLAMMMFKLDTFKLDFTGLALGVPvweqvknTMLITLWVFI---GVEGAV--VVSARARNKRDVGKATLLAVLSALGV 244
Cdd:pfam03222 158 ALVFSGLLPKIKGDLLLDALDTSYWP-------YILMALPVFFtsfGFHGNVpsLYKYYGGNVKKVRKAILIGTAIPLVL 230

                         250       260
                  ....*....|....*....|
gi 446334516  245 YLLVTLLSLGVVARPELAEI 264
Cdd:pfam03222 231 YILWQLATLGNLPREEFAPI 250
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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