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Conserved domains on  [gi|446319869|ref|WP_000397724|]
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MULTISPECIES: hypothetical protein [Bacillus]

Protein Classification

ribosomal L7/L12 family protein( domain architecture ID 10012819)

ribosomal L7/L12 family protein, similar to 50S ribosomal protein L7/L12 that contains binding sites for several factors involved in protein synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06771 PRK06771
hypothetical protein; Provisional
 1-93 9.68e-41

hypothetical protein; Provisional


:

Pssm-ID: 180688  Cd Length: 93  Bit Score: 129.19  E-value: 9.68e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446319869  1 MEFWMVILIVAVGFIYIAEKLTTIEKKNDARLKRIEDRLQLITKEMGIIEREPEINKELRQLVEEGKKITAVKRVREAFG 80
Cdd:PRK06771  1 MEFWMIIPIAIFGFIYIVEKLTKIEKKTDARLKRMEDRLQLITKEMGIVDREPPVNKELRQLMEEGQTVTAVKRVREAFG 80

                        90
                ....*....|...
gi 446319869 81 FSLLEAKQYVDKL 93
Cdd:PRK06771 81 FSLLEAKQYVDKL 93
 
Name Accession Description Interval E-value
PRK06771 PRK06771
hypothetical protein; Provisional
 1-93 9.68e-41

hypothetical protein; Provisional


Pssm-ID: 180688  Cd Length: 93  Bit Score: 129.19  E-value: 9.68e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446319869  1 MEFWMVILIVAVGFIYIAEKLTTIEKKNDARLKRIEDRLQLITKEMGIIEREPEINKELRQLVEEGKKITAVKRVREAFG 80
Cdd:PRK06771  1 MEFWMIIPIAIFGFIYIVEKLTKIEKKTDARLKRMEDRLQLITKEMGIVDREPPVNKELRQLMEEGQTVTAVKRVREAFG 80

                        90
                ....*....|...
gi 446319869 81 FSLLEAKQYVDKL 93
Cdd:PRK06771 81 FSLLEAKQYVDKL 93
 
Name Accession Description Interval E-value
PRK06771 PRK06771
hypothetical protein; Provisional
 1-93 9.68e-41

hypothetical protein; Provisional


Pssm-ID: 180688  Cd Length: 93  Bit Score: 129.19  E-value: 9.68e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446319869  1 MEFWMVILIVAVGFIYIAEKLTTIEKKNDARLKRIEDRLQLITKEMGIIEREPEINKELRQLVEEGKKITAVKRVREAFG 80
Cdd:PRK06771  1 MEFWMIIPIAIFGFIYIVEKLTKIEKKTDARLKRMEDRLQLITKEMGIVDREPPVNKELRQLMEEGQTVTAVKRVREAFG 80

                        90
                ....*....|...
gi 446319869 81 FSLLEAKQYVDKL 93
Cdd:PRK06771 81 FSLLEAKQYVDKL 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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