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Conserved domains on  [gi|446318214|ref|WP_000396069|]
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MULTISPECIES: thiaminase II [Staphylococcus]

Protein Classification

heme oxygenase-like domain-containing protein( domain architecture ID 60957)

heme oxygenase-like domain-containing protein such as pyrroloquinoline-quinone synthase that catalyzes the ring cyclization and eight-electron oxidation of 3a-(2-amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9-dicarboxylic-acid to PQQ

CATH:  1.20.910.10
EC:  1.-.-.-
Gene Ontology:  GO:0046872|GO:0016491
PubMed:  12230872
SCOP:  3001676

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
HemeO-like super family cl15243
heme oxygenase; Heme oxygenase (HO, EC 1.14.14.18) catalyzes the rate limiting step in the ...
11-218 7.19e-108

heme oxygenase; Heme oxygenase (HO, EC 1.14.14.18) catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family serves a variety of specific needs in different branches of life: in vertebrates, HO plays a role in heme homeostasis and oxidative stress response, and cellular signaling in mammals that include isoforms HO-1 and HO-2; in photosynthetic organisms including cyanobacteria, algae, and higher plants, biliverdin is used for photosynthetic pigment formation or light-sensing; and, in pathogenic bacteria, HO is part of a pathway for iron acquisition from host heme and heme products. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.


The actual alignment was detected with superfamily member TIGR04306:

Pssm-ID: 449518 [Multi-domain]  Cd Length: 208  Bit Score: 309.12  E-value: 7.19e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   11 AKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDILA 90
Cdd:TIGR04306   1 VKPIWDDYINHPFVQKIGDGTLERDKFRFYIEQDYAYLVEYAKVHALGGSKACDEDMEKELVEQIQGGVETEMGQHKRLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   91 QIVGESYEEIIKTKVWPPSGDHYRKHMYfQAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDFYSTE 170
Cdd:TIGR04306  81 EVLGISDEEYFQKIKPGPALRSYTSYMY-DVSRRGNWQELVAALLPCLWGYGEAATKLKGKHTAPEHSVYHKWIETYSSS 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 446318214  171 -MDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMTL 218
Cdd:TIGR04306 160 wFREAVNEGENLLNHLAETSSPEELEKLKTIFAESCEYEYNFWTMAYEY 208
 
Name Accession Description Interval E-value
salvage_TenA TIGR04306
thiaminase II; The TenA protein of Bacillus subtilis and Staphylococcus aurues, and the ...
11-218 7.19e-108

thiaminase II; The TenA protein of Bacillus subtilis and Staphylococcus aurues, and the C-terminal region of trifunctional protein Thi20p from Saccharomyces cerevisiae, perform cleavages on thiamine and related compounds to produce 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP), a substrate a salvage pathway for thiamine biosynthesis. The gene symbol tenA, for Transcription ENhancement A, reflects a misleading early characterization as a regulatory protein. This family is related to PqqC from the PQQ biosynthesis system (see TIGR02111), heme oxygenase (pfam01126), and CADD (Chlamydia protein Associating with Death Domains), a putative folate metabolism enzyme (see TIGR04305).


Pssm-ID: 213919 [Multi-domain]  Cd Length: 208  Bit Score: 309.12  E-value: 7.19e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   11 AKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDILA 90
Cdd:TIGR04306   1 VKPIWDDYINHPFVQKIGDGTLERDKFRFYIEQDYAYLVEYAKVHALGGSKACDEDMEKELVEQIQGGVETEMGQHKRLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   91 QIVGESYEEIIKTKVWPPSGDHYRKHMYfQAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDFYSTE 170
Cdd:TIGR04306  81 EVLGISDEEYFQKIKPGPALRSYTSYMY-DVSRRGNWQELVAALLPCLWGYGEAATKLKGKHTAPEHSVYHKWIETYSSS 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 446318214  171 -MDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMTL 218
Cdd:TIGR04306 160 wFREAVNEGENLLNHLAETSSPEELEKLKTIFAESCEYEYNFWTMAYEY 208
TenA_C_SaTenA-like cd19360
TenA_C proteins similar to Staphylococcus aureus TenA (SaTenA); This family of TenA proteins ...
3-214 2.39e-92

TenA_C proteins similar to Staphylococcus aureus TenA (SaTenA); This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. This family includes Staphylococcus aureus TenA (SaTenA) which plays two essential roles in thiamin metabolism: in the deamination of aminopyrimidine to HMP, and in hydrolyzing thiamin into HMP and 5-(2-hydroxyethyl)4-methylthiazole (THZ). It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. SaTenA is then also a putative transcriptional regulator controlling the secretion of extracellular proteases such as subtilisin-type proteases in bacteria. This family includes mostly uncharacterized TenA like proteins.


Pssm-ID: 381695 [Multi-domain]  Cd Length: 211  Bit Score: 269.84  E-value: 2.39e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Cdd:cd19360    1 FSEELREEAQPILEAIYAHPFVQGIAAGELPKEALIHYVQQDYEYLNAFLKVYALAIAKSDTREDMRFFLEQIGFILNGE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAQIVGESYEEiIKTKVWPPSGDHYRKHMYFQAHSReNAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAK 162
Cdd:cd19360   81 SHAHQNLCEVAGVDYEE-LQGAPWAPTADHYIKHMYYAARTG-DLGDILAALLPCPWTYVELAKRLIEEGKPTPDNPFYE 158
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446318214 163 WFDFY-STEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNM 214
Cdd:cd19360  159 WIDFYaDDEMDGLTDQLFARLDRLAEKASEEERERAKQAFLKSCQLEWRFWEM 211
TenA COG0819
Aminopyrimidine aminohydrolase TenA (thiamine salvage pathway) [Coenzyme transport and ...
1-220 2.83e-54

Aminopyrimidine aminohydrolase TenA (thiamine salvage pathway) [Coenzyme transport and metabolism];


Pssm-ID: 440581 [Multi-domain]  Cd Length: 218  Bit Score: 173.15  E-value: 2.83e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   1 MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVE 80
Cdd:COG0819    1 MSFSERLREAAAPIWEAILEHPFVQGLADGTLPREAFRHYLVQDYLYLEHFARALALAAAKAPDLEDMRFLAGLAAGLLE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  81 GEVLAHDILAQIVGESYEEIIKTKvWPPSGDHYRKHMYFQAHsRENAIYTIAAMAPCPYIYAELAKRSqSDHKLNREKDT 160
Cdd:COG0819   81 VELALHERYAAELGISEEELEATP-PSPTTRAYTSYLLAAAA-SGDYAELLAALLPCEWGYAEIGKRL-AERPLPPDHPY 157
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446318214 161 AKWFDFY-STEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMTLEQ 220
Cdd:COG0819  158 AEWIETYaSEEFQELVEWLIALLDRLAATASEAERERLEEAFRTASRLEYAFWDMAYRLER 218
PTZ00347 PTZ00347
phosphomethylpyrimidine kinase; Provisional
23-221 5.00e-11

phosphomethylpyrimidine kinase; Provisional


Pssm-ID: 240375 [Multi-domain]  Cd Length: 504  Bit Score: 61.52  E-value: 5.00e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  23 FIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHdilaqivgesYEEIIK 102
Cdd:PTZ00347  33 FVQGLGDGTLDQNAFRTYIAQDTLYLNGYIRILSYCITKSDVTATGGGLLELLKGVLEELKNCH----------HHYIDN 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214 103 TKVWPPSGDhYRKHMYFQAHSRENAIY----TIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDFYSTE-MDDIINV 177
Cdd:PTZ00347 103 PDAAGPEAA-CRKYVDFLLASGNADTLgpsvVIAAVIPCARLYAWVGQELTNEVELTESHPFRRWLLSYSDEpINTSVEQ 181
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 446318214 178 FEALMNKLAESMSDKELEQVKQVFLEScihERRFFNMAMTLEQW 221
Cdd:PTZ00347 182 LESLLDKYIRPGEFSEVAQAYRRAMEL---EYDFFDSFGYCLGR 222
TENA_THI-4 pfam03070
TENA/THI-4/PQQC family; Members of this family are found in all the three major phyla of life: ...
8-217 1.14e-10

TENA/THI-4/PQQC family; Members of this family are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes. In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase. The THI-4 protein, which is involved in thiamine biosynthesis, is also a member of this family. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4. This family includes bacterial coenzyme PQQ synthesis protein C or PQQC proteins. Pyrroloquinoline quinone (PQQ) is the prosthetic group of several bacterial enzymes,including methanol dehydrogenase of methylotrophs and the glucose dehydrogenase of a number of bacteria. PQQC has been found to be required in the synthesis of PQQ but its function is unclear. The exact molecular function of members of this family is uncertain.


Pssm-ID: 397272 [Multi-domain]  Cd Length: 210  Bit Score: 58.91  E-value: 1.14e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214    8 YQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHD 87
Cdd:pfam03070   1 HPQLRPIWKFYINHPFVQALAKGTLPREQFQGYVIQDYLYLVNFARVLAIIASKSPDLEVRREWENRIVDHDGNEIELHL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   88 ILAQIVGESYEEIIKTKVWPPSGDHYRkhmYFQAHSRE-NAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDF 166
Cdd:pfam03070  81 RLAEALGLSREDLSAYKPLPATRAYVR---YLLDFARRgSWLEAVAALLPCLFVYQEIASRLGEKIRALEGPEYYEWVKT 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 446318214  167 YSTEMddiinvFEA-------LMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMT 217
Cdd:pfam03070 158 YASEY------FRAaveeakrLLDRLLAYVSDEQLEELQEIFLKALEFEYSFWTMALD 209
 
Name Accession Description Interval E-value
salvage_TenA TIGR04306
thiaminase II; The TenA protein of Bacillus subtilis and Staphylococcus aurues, and the ...
11-218 7.19e-108

thiaminase II; The TenA protein of Bacillus subtilis and Staphylococcus aurues, and the C-terminal region of trifunctional protein Thi20p from Saccharomyces cerevisiae, perform cleavages on thiamine and related compounds to produce 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP), a substrate a salvage pathway for thiamine biosynthesis. The gene symbol tenA, for Transcription ENhancement A, reflects a misleading early characterization as a regulatory protein. This family is related to PqqC from the PQQ biosynthesis system (see TIGR02111), heme oxygenase (pfam01126), and CADD (Chlamydia protein Associating with Death Domains), a putative folate metabolism enzyme (see TIGR04305).


Pssm-ID: 213919 [Multi-domain]  Cd Length: 208  Bit Score: 309.12  E-value: 7.19e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   11 AKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDILA 90
Cdd:TIGR04306   1 VKPIWDDYINHPFVQKIGDGTLERDKFRFYIEQDYAYLVEYAKVHALGGSKACDEDMEKELVEQIQGGVETEMGQHKRLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   91 QIVGESYEEIIKTKVWPPSGDHYRKHMYfQAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDFYSTE 170
Cdd:TIGR04306  81 EVLGISDEEYFQKIKPGPALRSYTSYMY-DVSRRGNWQELVAALLPCLWGYGEAATKLKGKHTAPEHSVYHKWIETYSSS 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 446318214  171 -MDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMTL 218
Cdd:TIGR04306 160 wFREAVNEGENLLNHLAETSSPEELEKLKTIFAESCEYEYNFWTMAYEY 208
TenA_C_SaTenA-like cd19360
TenA_C proteins similar to Staphylococcus aureus TenA (SaTenA); This family of TenA proteins ...
3-214 2.39e-92

TenA_C proteins similar to Staphylococcus aureus TenA (SaTenA); This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. This family includes Staphylococcus aureus TenA (SaTenA) which plays two essential roles in thiamin metabolism: in the deamination of aminopyrimidine to HMP, and in hydrolyzing thiamin into HMP and 5-(2-hydroxyethyl)4-methylthiazole (THZ). It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. SaTenA is then also a putative transcriptional regulator controlling the secretion of extracellular proteases such as subtilisin-type proteases in bacteria. This family includes mostly uncharacterized TenA like proteins.


Pssm-ID: 381695 [Multi-domain]  Cd Length: 211  Bit Score: 269.84  E-value: 2.39e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Cdd:cd19360    1 FSEELREEAQPILEAIYAHPFVQGIAAGELPKEALIHYVQQDYEYLNAFLKVYALAIAKSDTREDMRFFLEQIGFILNGE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAQIVGESYEEiIKTKVWPPSGDHYRKHMYFQAHSReNAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAK 162
Cdd:cd19360   81 SHAHQNLCEVAGVDYEE-LQGAPWAPTADHYIKHMYYAARTG-DLGDILAALLPCPWTYVELAKRLIEEGKPTPDNPFYE 158
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446318214 163 WFDFY-STEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNM 214
Cdd:cd19360  159 WIDFYaDDEMDGLTDQLFARLDRLAEKASEEERERAKQAFLKSCQLEWRFWEM 211
TenA COG0819
Aminopyrimidine aminohydrolase TenA (thiamine salvage pathway) [Coenzyme transport and ...
1-220 2.83e-54

Aminopyrimidine aminohydrolase TenA (thiamine salvage pathway) [Coenzyme transport and metabolism];


Pssm-ID: 440581 [Multi-domain]  Cd Length: 218  Bit Score: 173.15  E-value: 2.83e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   1 MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVE 80
Cdd:COG0819    1 MSFSERLREAAAPIWEAILEHPFVQGLADGTLPREAFRHYLVQDYLYLEHFARALALAAAKAPDLEDMRFLAGLAAGLLE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  81 GEVLAHDILAQIVGESYEEIIKTKvWPPSGDHYRKHMYFQAHsRENAIYTIAAMAPCPYIYAELAKRSqSDHKLNREKDT 160
Cdd:COG0819   81 VELALHERYAAELGISEEELEATP-PSPTTRAYTSYLLAAAA-SGDYAELLAALLPCEWGYAEIGKRL-AERPLPPDHPY 157
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446318214 161 AKWFDFY-STEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMTLEQ 220
Cdd:COG0819  158 AEWIETYaSEEFQELVEWLIALLDRLAATASEAERERLEEAFRTASRLEYAFWDMAYRLER 218
TenA_C_BsTenA-like cd19364
TenA_C proteins similar to Bacillus subtilis TenA; This family of TenA proteins belongs to the ...
3-217 6.09e-37

TenA_C proteins similar to Bacillus subtilis TenA; This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. This family includes Bacillus subtilis TenA which has been shown to be a thiaminase II, catalyzing the hydrolysis of thiamine into HMP and 5-(2-hydroxyethyl)-4-methylthiazole (THZ), within thiamine metabolism. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect.


Pssm-ID: 381699 [Multi-domain]  Cd Length: 212  Bit Score: 128.46  E-value: 6.09e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Cdd:cd19364    1 FTEELREAADPLWQKSFEHPFIQGLADGTLPLETFRYYLIQDAYYLKHFAKLHALAAAKADDPAIKALLLEGAQGLAEGE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAQIVGESYEEIIKTKVwPPSGDHYRKHMYFQAHSrENAIYTIAAMAPCPYIYAELAKR---SQSDHKLNREkd 159
Cdd:cd19364   81 LALRETFFKELGITEEEIAQTPP-APTAYHYVSHMYRQLNE-GSVAEAVAALLPCYWLYQEIGERladAGSPVPLYQR-- 156
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446318214 160 takWFDFYST-EMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMT 217
Cdd:cd19364  157 ---WIDTYASdEFTESVQQQIDLVDRLAEEASEEEREKMKQAFLISSYYELQFWEMAYT 212
TenA_PqqC-like cd16099
TenA-like proteins including TenA_C and TenA_E proteins, as well as pyrroloquinoline quinone ...
14-214 1.01e-34

TenA-like proteins including TenA_C and TenA_E proteins, as well as pyrroloquinoline quinone (PQQ) synthesis protein C; TenA proteins participate in thiamin metabolism and can be classified into two classes: TenA_C which has an active site Cys, and TenA_E which does not; TenA_E proteins often have a pair of structurally conserved Glu residues in the active site. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product amino-HMP (4-amino-5-amino-methyl-2-methylpyrimidine) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway; the role of TenA_E proteins is less clear. Arabidopsis thaliana TenA_E hydrolyzes amino-HMP to AMP, and the N-formyl derivative of amino-HMP to amino-HMP, but does not hydrolyze thiamin. Bacillus subtilis TenA_C can hydrolyze amino-HMP to AMP and can catalyze the hydrolysis of thiamin. Saccharomyces cerevisiae THI20 includes a C-terminal tetrameric TenA-like domain fused to an N-terminal ThiD domain, and participates in thiamin biosynthesis, degradation and salvage; the TenA-like domain catalyzes the production of HMP from thiamin degradation products (salvage). Bacillus halodurans TenA_C participates in a salvage pathway where the thiamine degradation product 2-methyl-4-formylamino-5-aminomethylpyrimidine (formylamino-HMP) is hydrolyzed first to amino-HMP by the YlmB protein, and the amino-HMP is then hydrolyzed by TenA to produce HMP. Helicobacter pylori TenA_C is also thought to catalyze a salvage reaction but the pyrimidine substrate has not yet been identified. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect; Pyrococcus furiosus TenA_E lacks appropriate surface charges for DNA interactions. This family also includes bacterial coenzyme pyrroloquinoline quinone (PQQ) synthesis protein C (PQQC), an oxidase involved in the final step of PQQ biosynthesis, and CADD, a Chlamydia protein that interacts with death receptors.


Pssm-ID: 381691 [Multi-domain]  Cd Length: 196  Bit Score: 122.46  E-value: 1.01e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  14 IINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFmVEGEVLAHDILAQIV 93
Cdd:cd16099    1 IWDAILNHPFVQELAAGTLPREKFRYYLAQDYYYLKDFARALALAAAKAPDLELRTFLAELINV-LDDELELHEKLLAEL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  94 GESYEEIIKTkVWPPSGDHYRKHMYFQAHSReNAIYTIAAMAPCPYIYAELAKRsqSDHKLNREKDTAKWFDFY-STEMD 172
Cdd:cd16099   80 GISEEDLSEA-EPNPATLAYTNHLLRVAARG-TPAEGLAALLPCYWSYGEIGRR--LAASLPEHPPYRFWIDFYaSDEYQ 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 446318214 173 DIINVFEALMNKLAESmSDKELEQVKQVFLESCIHERRFFNM 214
Cdd:cd16099  156 ELVEELLQLLDQLAAA-GEEEKEELKEIFLTSLRYELMFWDA 196
TenA_C-like cd19365
uncharacterized TenA_C proteins; This family of TenA proteins belongs to the TenA_C class as ...
4-215 1.13e-24

uncharacterized TenA_C proteins; This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes mostly uncharacterized TenA_C- like proteins.


Pssm-ID: 381700 [Multi-domain]  Cd Length: 205  Bit Score: 96.43  E-value: 1.13e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   4 SQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE- 82
Cdd:cd19365    1 TEALWEAIAPIYAAILAHPFIRELADGTLPREKFRFYLAQDALYLRDYARALALLAARAPDPEEQVFFARFAAGAIEVEr 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAQIVGESYEEIIktkvwpPSGDHYRKHMYFQAHSRENAIyTIAAMAPCPYIYAE----LAKRSQSDHKLnrek 158
Cdd:cd19365   81 ELHRSFLGEFGIDAAAEPS------PVTLAYTSFLLATAATGPYAV-AVAAVLPCFWIYAEvgkrLAAAASPNHPY---- 149
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446318214 159 dtAKWFDFYS-TEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMA 215
Cdd:cd19365  150 --QDWIDTYSdEEFAEAVRRAIAIVDRLAAEASPEERARMLEAFLRASRLEWMFWDAA 205
TenA_C_BhTenA-like cd19366
TenA_C proteins similar to Bacillus halodurans TenA; This family of TenA proteins belongs to ...
3-215 1.75e-20

TenA_C proteins similar to Bacillus halodurans TenA; This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. This family includes Bacillus halodurans TenA which participates in a salvage pathway where the thiamine degradation product 2-methyl-4-formylamino-5-aminomethylpyrimidine (formylamino-HMP) is hydrolyzed first to amino-HMP by the YlmB protein, and the amino-HMP is then hydrolyzed by TenA to produce HMP. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect.


Pssm-ID: 381701 [Multi-domain]  Cd Length: 213  Bit Score: 85.69  E-value: 1.75e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Cdd:cd19366    1 FSERLREKAKPIWEAGLEHPFVQGLGDGTLDKEKFKFYLKQDYLYLIDYARVFALGAAKADDLETMGRFAELLHGTLNTE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAQIVGESYEEIIKTKVWpPSGDHYRKHMYFQAHSrENAIYTIAAMAPCPYIYAELAKR-----SQSDHKLNRE 157
Cdd:cd19366   81 MDLHRQYAAEFGITEEELEATEPS-PTTLAYTSYMLRTAQT-GTLAELLAALLPCAWGYAEIGKRlaeqgGALEHNPYRE 158
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446318214 158 kdtakWFDFYST-EMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMA 215
Cdd:cd19366  159 -----WIEMYSSdEFTELADWLIDLLDELAEGKSEAELERLEEIFLTSSRYEYMFWDMA 212
TenA_C_HP1287-like cd19361
TenA_C proteins similar to Helicobacter pylori TenA (HP1287; This family of TenA proteins ...
3-214 9.10e-19

TenA_C proteins similar to Helicobacter pylori TenA (HP1287; This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. This family includes Helicobacter pylori TenA (HP1287) protein which is thought to catalyze a salvage reaction in thiamin metabolism, however its pyrimidine substrate has not yet been identified. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. HP1287 may contribute to stomach colonization and persistence.


Pssm-ID: 381696 [Multi-domain]  Cd Length: 212  Bit Score: 81.09  E-value: 9.10e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Cdd:cd19361    1 LSERLYEAVEDIWDSYYEHPFVQGIADGTLDIEKFRFYMIQDYLYLLDYAKVFALGVAKAKDEEVMRFFADLINAILNEE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAQIVGESYEEIIKTKVwPPSGDHYRKHMYFQAHsRENAIYTIAAMAPCPYIYAELAKR------SQSDHKLNR 156
Cdd:cd19361   81 MDIHRGYMKRLGITEEEIENTKP-ALDNLSYTSYMLSVAY-EGGIAEILAAILSCSWSYEYIAKKlverypAALEHEFYG 158
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446318214 157 EkdtakWFDFYSTE-----MDDIINvfeaLMNKLAESMSDKELEQVKQVFLESCIHERRFFNM 214
Cdd:cd19361  159 E-----WVKGYSSEeyaeaNQELID----LLDRLTEDISEEQIEKLEEIFVNCSRYELKFWDM 212
TenA_C-like cd19369
uncharacterized TenA_C proteins; This family of TenA proteins belongs to the TenA_C class as ...
13-214 2.98e-16

uncharacterized TenA_C proteins; This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes mostly uncharacterized TenA_C- like proteins.


Pssm-ID: 381704 [Multi-domain]  Cd Length: 202  Bit Score: 74.19  E-value: 2.98e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  13 PIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDILAQI 92
Cdd:cd19369    1 PIWEQYLEHPFIKELGEGTLDKEKFKNYLIQDSLYLKEYAKVFAMGIYKSRTMKEMQFFYSSLSFVNEDETATRIKYLKE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  93 VGESYEEIIKTKVwPPSGDHYRKHMYFQAHSRENAiYTIAAMAPC----PYIYAELAKRSQSDHKLNREKDtakWFDFY- 167
Cdd:cd19369   81 FGLTDEDIEKIEP-LPENKAYTDYMLGIAKTGDVK-EILMAVLPCmlsyYYIFKELVKKYKDNLESNPYKD---WIEDYa 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 446318214 168 STEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNM 214
Cdd:cd19369  156 SEEYAEYCKEWIDFADRLCENLSEEEKEKLKEIFRKASLYELKFWDM 202
TenA_C_AtTH2-like cd19368
TenA_C family similar to the N-terminal TenA_C domain of Arabidopsis thaliana thiamine ...
3-213 1.01e-15

TenA_C family similar to the N-terminal TenA_C domain of Arabidopsis thaliana thiamine requiring 2; This TenA family belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. Arabidopsis thaliana TH2 is an orphan enzyme thiamin monophosphate phosphatase which has a haloacid dehalogenase (HAD) family domain fused to its TenA_C domain, it's TenA_C domain has thiamin salvage hydrolase activity against amino-HMP. This family includes mostly uncharacterized single-domain TenA_C- like proteins; some however have additional domains such as a HAD family domain or a kinase domain It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect.


Pssm-ID: 381703 [Multi-domain]  Cd Length: 210  Bit Score: 73.04  E-value: 1.01e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFmVEGE 82
Cdd:cd19368    1 LAKRLWKKNRDEALFALYHPFVVGLAAGNLPLDSFRHYISQDAHFLEAFARAYELAEAKADDDEDKKAIRELRKG-VLEE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAQivgesyEEIIKTKVWPPSGDHYRKHMYF----QAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREK 158
Cdd:cd19368   80 LKLHDSYAE------EWGVDLPKEVTPDPATRKYTDFllatASGKVKVAAYTLAAMAPCMRLYAFLGQELARALDDTEDH 153
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446318214 159 DTAKWFDFYST-EMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFN 213
Cdd:cd19368  154 PYKKWIDTYSSqEFEALALQLEDLLDKLSASLTGEELEALEKLYRRAMKLEVEFFA 209
TenA_C_ScTHI20-like cd19367
TenA_C family similar to the C-terminal TenA_C domain of Saccharomyces cerevisiae THI20 ...
22-216 2.27e-11

TenA_C family similar to the C-terminal TenA_C domain of Saccharomyces cerevisiae THI20 protein; This TenA family belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. Saccharomyces cerevisiae THI20 includes a C-terminal tetrameric TenA-like domain fused to an N-terminal HMP kinase/HMP-P kinase (ThiD-like) domain, and participates in thiamin biosynthesis, degradation and salvage; the TenA-like domain catalyzes the production of HMP from thiamin degradation products (salvage). A majority of this family are single-domain TenA_C- like proteins; some however have additional domains such as a ThiD domain. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect.


Pssm-ID: 381702 [Multi-domain]  Cd Length: 204  Bit Score: 60.99  E-value: 2.27e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  22 DFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEgEVLAH-DILAQiVGESYEEI 100
Cdd:cd19367   10 PFVRQLADGTLPLESFRHYLKQDYLYLIHYARAHALAAYKAPTLEDIRAAAAILLAILE-EMELHvKYCAE-WGISEEEL 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214 101 IKTKvwppsgdhyrkhmyfqaHSRENAIYT---------------IAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWF 164
Cdd:cd19367   88 EATP-----------------ESPATLAYTryvldvglsgdlldlLVALAPCLLGYGEIGLRLAADPATKLEGNPyWSWI 150
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446318214 165 DFY-STEMDDIINVFEALMNKLA-ESMSDKELEQVKQVFLESCIHERRFFNMAM 216
Cdd:cd19367  151 ETYaSDEYQEAVREGIELLEKLAaERPSPARLEELVKIFATATRLEIGFWDMGL 204
TenA_C_PH1161-like cd19363
uncharacterized TenA_C proteins similar to Pyrococcus horikoshii PH1161; This family of TenA ...
4-215 4.16e-11

uncharacterized TenA_C proteins similar to Pyrococcus horikoshii PH1161; This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; only one of the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes functionally uncharacterized TenA like proteins such as Pyrococcus horikoshii PH1161 protein.


Pssm-ID: 381698 [Multi-domain]  Cd Length: 210  Bit Score: 60.42  E-value: 4.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   4 SQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEV 83
Cdd:cd19363    2 TGKLRRDADDIWKKILNHPFVVELYSGTLPMEKFKFYLLQDYNYLVGSTKNLSILASKAESLDLMRELLELAYGEATTEF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  84 LAHDILAQIVGESYEEIIKTKVWPpSGDHYRKHMYFQAhSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKW 163
Cdd:cd19363   82 ANYEELLDELGLSLEDAIKVEPFP-TNVAYMNFLLSTS-SLGSFYEGLAALLPCFWSYLEIAEYHKDKLSENPNDIYRDW 159
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446318214 164 FDFYSTEmdDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMA 215
Cdd:cd19363  160 ASVYLSK--EYKELVERLRRIVDKYGEGEPFEKLKRIFKTASKYEYMFWDAA 209
PTZ00347 PTZ00347
phosphomethylpyrimidine kinase; Provisional
23-221 5.00e-11

phosphomethylpyrimidine kinase; Provisional


Pssm-ID: 240375 [Multi-domain]  Cd Length: 504  Bit Score: 61.52  E-value: 5.00e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  23 FIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHdilaqivgesYEEIIK 102
Cdd:PTZ00347  33 FVQGLGDGTLDQNAFRTYIAQDTLYLNGYIRILSYCITKSDVTATGGGLLELLKGVLEELKNCH----------HHYIDN 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214 103 TKVWPPSGDhYRKHMYFQAHSRENAIY----TIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDFYSTE-MDDIINV 177
Cdd:PTZ00347 103 PDAAGPEAA-CRKYVDFLLASGNADTLgpsvVIAAVIPCARLYAWVGQELTNEVELTESHPFRRWLLSYSDEpINTSVEQ 181
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 446318214 178 FEALMNKLAESMSDKELEQVKQVFLEScihERRFFNMAMTLEQW 221
Cdd:PTZ00347 182 LESLLDKYIRPGEFSEVAQAYRRAMEL---EYDFFDSFGYCLGR 222
TENA_THI-4 pfam03070
TENA/THI-4/PQQC family; Members of this family are found in all the three major phyla of life: ...
8-217 1.14e-10

TENA/THI-4/PQQC family; Members of this family are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes. In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase. The THI-4 protein, which is involved in thiamine biosynthesis, is also a member of this family. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4. This family includes bacterial coenzyme PQQ synthesis protein C or PQQC proteins. Pyrroloquinoline quinone (PQQ) is the prosthetic group of several bacterial enzymes,including methanol dehydrogenase of methylotrophs and the glucose dehydrogenase of a number of bacteria. PQQC has been found to be required in the synthesis of PQQ but its function is unclear. The exact molecular function of members of this family is uncertain.


Pssm-ID: 397272 [Multi-domain]  Cd Length: 210  Bit Score: 58.91  E-value: 1.14e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214    8 YQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHD 87
Cdd:pfam03070   1 HPQLRPIWKFYINHPFVQALAKGTLPREQFQGYVIQDYLYLVNFARVLAIIASKSPDLEVRREWENRIVDHDGNEIELHL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   88 ILAQIVGESYEEIIKTKVWPPSGDHYRkhmYFQAHSRE-NAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDF 166
Cdd:pfam03070  81 RLAEALGLSREDLSAYKPLPATRAYVR---YLLDFARRgSWLEAVAALLPCLFVYQEIASRLGEKIRALEGPEYYEWVKT 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 446318214  167 YSTEMddiinvFEA-------LMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMT 217
Cdd:pfam03070 158 YASEY------FRAaveeakrLLDRLLAYVSDEQLEELQEIFLKALEFEYSFWTMALD 209
PRK14713 PRK14713
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
3-215 6.61e-10

bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;


Pssm-ID: 237797 [Multi-domain]  Cd Length: 530  Bit Score: 58.26  E-value: 6.61e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSmndvkflveqiefMVEGE 82
Cdd:PRK14713 320 FTAALWQASGPIREAIEDLPFVRALADGTLPEEAFEFYLAQDALYLNGYSRALARLAALAPD-------------PAEQV 386
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAQIVGES--YEEIIKTKVWP----PSGDHYRKHMYFQAHSRENAIYTiAAMAPCPYIYAELAKR------SQS 150
Cdd:PRK14713 387 FWAQSAQACLEVESelHRSWLGDRDADtapsPVTLAYTDFLLARAAGGSYAVGA-AAVLPCFWLYAEVGAElharagNPD 465
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214 151 DHKLnrekdtAKWFDFYSTE-----MDDIINVFEAlmnkLAESMSDKELEQVKQVFLESCIHERRFFNMA 215
Cdd:PRK14713 466 DHPY------AEWLQTYADPefaaaTRRAIAFVDR----AFRAASPAERAAMARAFLTACRYELEFFDQA 525
PRK09517 PRK09517
multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; ...
3-215 1.92e-09

multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional


Pssm-ID: 169939 [Multi-domain]  Cd Length: 755  Bit Score: 56.91  E-value: 1.92e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLipkmnsmndvKFLVEQIEFMVEGE 82
Cdd:PRK09517 546 FTRALWEASGDIIAEINDSDFIRMLGDGTLRRPEFDFYIDQDAQYLRQYSRALARL----------SSIAPDSHAQVEWA 615
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 VLAHDILAqIVGESYEEIIKTKVWPPSGDH----YRKHMYFQAHSRENAIyTIAAMAPCPYIYAE----LAKRSQSDHKL 154
Cdd:PRK09517 616 QSAAECIV-VEAELHRSYLSGKEAPSAPSPvtmaYTDFLIARTYTEDYVV-GVAAVLPCYWLYAEiglmLAEQNHDEHPY 693
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446318214 155 nrekdtAKWFDFYSTE------MDDIINVFEALMNKLAESMSDkeleqVKQVFLESCIHERRFFNMA 215
Cdd:PRK09517 694 ------KDWLNTYSGEefiagtRAAIARVEKALENAGPEQRVD-----AARAFLSASVHEREFFDQA 749
TenA_C_Bt3146-like cd19359
uncharacterized TenA_C proteins similar to Bacteroides thetaiotaomicron Bt3146; This family of ...
5-213 6.92e-09

uncharacterized TenA_C proteins similar to Bacteroides thetaiotaomicron Bt3146; This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; only one of the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes mostly uncharacterized TenA-like proteins such as Bacteroides thetaiotaomicron Bt3146.


Pssm-ID: 381694 [Multi-domain]  Cd Length: 206  Bit Score: 53.89  E-value: 6.92e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   5 QKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEgevL 84
Cdd:cd19359    2 DKLWNDNEDLWDKALNNPFCQGMADGTLDLDGFGYYMVQDYYYCINYVRFKALRAAKAPDPDLLAFLAAKIKSYLD---Y 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  85 AHDILAQIVGESYEEIIKTKVWP-PSGDHYRKHMYFQAHSrENAIYTIAAMAPCPYIYAELAKRSQSDhklNREKDTaKW 163
Cdd:cd19359   79 AEDFLKTCHIKLGIPDVVDGVKPsPALKAYVDFERSVAES-EDWFYLLVAMIPCIYLWYWLANQLNED---PSDKNT-NF 153
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446318214 164 FDFYSTEMDDIINVFEALMNKLAESMSDKEL--EQVKQVFLESCIHERRFFN 213
Cdd:cd19359  154 YKTWIEPNLPDPSSAKQLEFFLNANAAWSKIdrEKANEIFRQAMQLEINFFN 205
TenA_E_Spr0628-like cd19358
TenA_E proteins similar to Streptococcus pneumoniae Spr0628 and Saccharomyces cerevisiae S288C ...
3-215 4.39e-05

TenA_E proteins similar to Streptococcus pneumoniae Spr0628 and Saccharomyces cerevisiae S288C PET18; This family of TenA proteins belongs to the TenA_E class, and lacks the conserved active site Cys residue of the TenA_C class; most have a pair of structurally conserved Glu residues in the active site. TenA_C proteins (EC 3.5.99.2; aminopyrimidine aminohydrolase, also known as thiaminase II) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway; the role of TenA_E proteins is less clear. Arabidopsis thaliana TenA_E (not belonging to this family) hydrolyzes amino-HMP to AMP, and the N-formyl derivative of amino-HMP to amino-HMP. Members of this family include the putative thiaminase Streptococcus pneumoniae Spr0628, and Saccharomyces cerevisiae S288C PET18, a protein of unknown function whose expression is induced in the absence of thiamin. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. Many proteins in this family have yet to be characterized.


Pssm-ID: 381693 [Multi-domain]  Cd Length: 209  Bit Score: 42.94  E-value: 4.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214   3 FSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Cdd:cd19358    1 FSDRLRAANAEDWDAAVTHRFVRELCAGTLPDAVLARYLVQDYQFVETFLRLLGKAVAKAPDLEAKLRLARFLGFLANDE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  83 V-LAHDILAQIvGESYEEIIKTKVWPPSgDHYRKHMYFQAHSRENAiYTIAAMAPCPYIYAELAKRSQSdhKLNREKDTA 161
Cdd:cd19358   81 NdYFERAFAAL-GVSEADREAPPLLPAT-RAFIDLMLEAARSGSYA-EILTVLLVAEWLYLDWASRAAA--AAPLRFKHQ 155
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446318214 162 KWFDFYSTE-MDDIINVFEALMNKLAESmsDKELEQVKQVFLESCIHERRFFNMA 215
Cdd:cd19358  156 EWIDLHSGPeFEAWVDFLRDEVDRVGPT--EEERERLEAVFARAVELEIAFFDAA 208
TenA_C_SsTenA-1-like cd19362
uncharacterized TenA_C proteins similar to Sulfolobus solfataricus TenA-1 (Sso2206); This ...
22-216 1.50e-03

uncharacterized TenA_C proteins similar to Sulfolobus solfataricus TenA-1 (Sso2206); This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; only one of the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes mostly uncharacterized TenA like proteins such as Sulfolobus solfataricus putative TenA-like thiaminase (Tena-1, Sso2206).


Pssm-ID: 381697 [Multi-domain]  Cd Length: 200  Bit Score: 38.58  E-value: 1.50e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214  22 DFIQKMLLGNIQADALRHYLQADAAYLKEFtnLYALLIP-KMNSMNDVKFLVEQIEFMVEGEVLAHDILAQIVGESYEEI 100
Cdd:cd19362   19 EFVERMRDGTLPLDNFRYYLIQDSKYVEEM--LRALLRAsSKAPLDKAIKILNSVFSGRDKGMEVHKFLYSELGITEDEI 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446318214 101 IKTKvWPPSGDHYRKHMYFqaHSRENAIYTIAAMAPCPYIYAELAKRS-QSDHKLNRekdtaKWFDFYSTemDDIINVFE 179
Cdd:cd19362   97 RRTG-YNLVNYAYTRHLYY--YSTLGWPQFLAAWAPCMWGYSEIGKYVlNSPNELYK-----TWASFYAS--KDYKKRVE 166
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 446318214 180 ALMNKLaESMSDKELeqVKQVFLESCIHERRFFNMAM 216
Cdd:cd19362  167 AILEAL-DSIEDTED--IKNIFRNSVNFEIMFWDAAL 200
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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