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Conserved domains on  [gi|446170576|ref|WP_000248431|]
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fimbrial chaperone [Salmonella enterica]

Protein Classification

fimbria/pilus periplasmic chaperone( domain architecture ID 1001749)

fimbria/pilus periplasmic chaperone, similar to Haemophilus sp. GhfB protein which is thought to confer upon the strain the ability to survive in the genital tract

Gene Ontology:  GO:0071555|GO:0061077|GO:0030288

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09926 super family cl35895
fimbrial chaperone;
30-251 4.98e-141

fimbrial chaperone;


The actual alignment was detected with superfamily member PRK09926:

Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 395.24  E-value: 4.98e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGS-AL 108
Cdd:PRK09926  25 ADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRIDPKRGQTIKLMYTAStAL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 109 PQDRESLFWFNVLEIPPKSKskAKEGESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSA 188
Cdd:PRK09926 105 PKDRESVFWFNVLEVPPKPD--AEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSEGKASLRVTNPTP 182

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446170576 189 YNVSISNVKFKVGGKEYTVDSKSVLPFSGVSMPVKGLSNNI-NGTVIYNTINDNGGTNKREAKI 251
Cdd:PRK09926 183 YYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKAsSGKVHFYAINDFGGAIEGNASL 246
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
30-251 4.98e-141

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 395.24  E-value: 4.98e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGS-AL 108
Cdd:PRK09926  25 ADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRIDPKRGQTIKLMYTAStAL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 109 PQDRESLFWFNVLEIPPKSKskAKEGESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSA 188
Cdd:PRK09926 105 PKDRESVFWFNVLEVPPKPD--AEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSEGKASLRVTNPTP 182

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446170576 189 YNVSISNVKFKVGGKEYTVDSKSVLPFSGVSMPVKGLSNNI-NGTVIYNTINDNGGTNKREAKI 251
Cdd:PRK09926 183 YYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKAsSGKVHFYAINDFGGAIEGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
30-251 5.73e-82

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 245.28  E-value: 5.73e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSALP 109
Cdd:COG3121   23 AGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGKSQTVRIIRTGPPLP 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 110 QDRESLFWFNVLEIPPKSKSKAKEgeslNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSqkKEGNTLSLfaQNDSAY 189
Cdd:COG3121  103 QDRESLFRLNVDEIPPKDASEEGK----NTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS--LVGNGLTV--TNPGPY 174

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446170576 190 NVSISNVKFKVGGKEYTVDSKSVLPFSGVSMPVK-GLSNNINGTVIYNTINDNGGTNKREAKI 251
Cdd:COG3121  175 YVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPaGASLAAGGKVTWATINDYGGAVPLEATL 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 32-158 1.99e-58

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 181.25  E-value: 1.99e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576   32 IVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSALPQD 111
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 446170576  112 RESLFWFNVLEIPPKSKSKAKEgeslNQLQLAFRTRIKLFFRPDGLK 158
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQ----NGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
30-251 4.98e-141

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 395.24  E-value: 4.98e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGS-AL 108
Cdd:PRK09926  25 ADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRIDPKRGQTIKLMYTAStAL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 109 PQDRESLFWFNVLEIPPKSKskAKEGESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSA 188
Cdd:PRK09926 105 PKDRESVFWFNVLEVPPKPD--AEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSEGKASLRVTNPTP 182

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446170576 189 YNVSISNVKFKVGGKEYTVDSKSVLPFSGVSMPVKGLSNNI-NGTVIYNTINDNGGTNKREAKI 251
Cdd:PRK09926 183 YYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKAsSGKVHFYAINDFGGAIEGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
30-251 5.73e-82

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 245.28  E-value: 5.73e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSALP 109
Cdd:COG3121   23 AGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGKSQTVRIIRTGPPLP 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 110 QDRESLFWFNVLEIPPKSKSKAKEgeslNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSqkKEGNTLSLfaQNDSAY 189
Cdd:COG3121  103 QDRESLFRLNVDEIPPKDASEEGK----NTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS--LVGNGLTV--TNPGPY 174

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446170576 190 NVSISNVKFKVGGKEYTVDSKSVLPFSGVSMPVK-GLSNNINGTVIYNTINDNGGTNKREAKI 251
Cdd:COG3121  175 YVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPaGASLAAGGKVTWATINDYGGAVPLEATL 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 32-158 1.99e-58

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 181.25  E-value: 1.99e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576   32 IVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSALPQD 111
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 446170576  112 RESLFWFNVLEIPPKSKSKAKEgeslNQLQLAFRTRIKLFFRPDGLK 158
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQ----NGLQLALRSRIKLFYRPAGLA 123
PRK15249 PRK15249
fimbrial chaperone;
30-242 2.02e-52

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 170.75  E-value: 2.02e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQE-LKLPFVITPPVSRIDPQKGQSLRITYMGS-A 107
Cdd:PRK15249  28 ASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENsSAMPFIATPPVFRIQPKAGQVVRVIYNNTkK 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 108 LPQDRESLFWFNVLEIPPkskSKAKEGESLNQLQLAFRTRIKLFFRPDGLkGTPGDAAANLK-----WSQKKEGNTLSlf 182
Cdd:PRK15249 108 LPQDRESVFWFNVLQVPP---TNIGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQiktvnKGSGKSGIVIV-- 181

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446170576 183 aqNDSAYNVSISNVKFKVGGKEYTVDSKSVLPFSGVS--MPVKGLSNNINGTVIYNTINDNG 242
Cdd:PRK15249 182 --NPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTwwLPGKRSLKSFSGTVTVTLVNDQG 241
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 29-197 1.46e-41

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 142.50  E-value: 1.46e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  29 NADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSAL 108
Cdd:PRK15253  32 HAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVAAESGQQIKIKKMPNSL 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 109 PQDRESLFWFNVLEIPPKSkskaKEGESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLslfaQNDSA 188
Cdd:PRK15253 112 PDNKESLFYLNVLDIPPNS----QENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIM----KNDTA 183


                 ....*....
gi 446170576 189 YNVSISNVK 197
Cdd:PRK15253 184 NWITVTDVK 192
lfpB PRK15290
fimbrial chaperone;
30-242 1.15e-40

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 140.13  E-value: 1.15e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNK-PLLVQTWlddgrdgVDP----QELKLPFVITPPVSRIDPQKGQSLRITYM 104
Cdd:PRK15290  37 AGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAW-------VDPfnkeDKSKAPFTVIPPVSRLEPSQEKVLRIIHT 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 105 -GSALPQDRESLFWFNVLEIPPKSKSKAKegeslNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWsqKKEGNtlSLFA 183
Cdd:PRK15290 110 kGVSLPDDRESVFWLNIKNIPPSASNKAT-----NSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKW--RREGR--NLIA 180

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446170576 184 QNDSAYNVSISNVkfKVGGKEytVDSKSVLPFSGVSMPVKglSNNINGTVIYNTINDNG 242
Cdd:PRK15290 181 ENPNPIHISVMDV--IVDGHD--VPLNMIRPFETLTLPLP--ANSAGGQMTWRFINDYG 233
PRK15218 PRK15218
fimbrial assembly chaperone;
30-199 1.59e-39

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 136.65  E-value: 1.59e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSALP 109
Cdd:PRK15218  18 SGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANSGQQLKIKKLANNLP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 110 QDRESLFWFNVLEIPPKSkskaKEGESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLslfaQNDSAY 189
Cdd:PRK15218  98 GDRESLFYLNVLDIPPNS----DENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSISV----KNNSAN 169

                        170
                 ....*....|
gi 446170576 190 NVSISNVKFK 199
Cdd:PRK15218 170 WITIPEIKAK 179
PRK15208 PRK15208
molecular chaperone LpfB;
32-242 2.65e-36

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 128.10  E-value: 2.65e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  32 IVISGTRIVYPASSKDVIVNLDNRG-NKPLLVQTWLDDGRDGVdpqelKLPFVITPPVSRIDPQKGQSLRITYMGSALPQ 110
Cdd:PRK15208  23 VALSSTRVIYDGSKKEASLTVNNKSkTEEFLIQSWIDDANGNK-----KTPFIITPPLFKLDPTKNNVLRIVNITNTLPQ 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 111 DRESLFWFNVLEIPpkskSKAKEGESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSqkKEGNTLSLfaQNDSAYN 190
Cdd:PRK15208  98 DRESVYWINVKAIP----AKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFT--RAGNQIKV--ENPSAFN 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446170576 191 VSISnvKFKVGGKEytVDSKSVLPFSG-VSMPVKGLSNNINgTVIYNTINDNG 242
Cdd:PRK15208 170 LTFN--QFYANGRD--IEKAGMVPAKGsLNIELPAGTGKVS-EVKYNIINDFG 217
PRK15195 PRK15195
molecular chaperone FimC;
32-242 3.39e-35

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 125.36  E-value: 3.39e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  32 IVISGTRIVYPASSKDVIVNLDNRGNKP-LLVQTWLDDGRdGVDPQElklpFVITPPVSRIDPQKGQSLRITYMGSALPQ 110
Cdd:PRK15195  27 IALGATRVIYPADAKQTSLAIRNSHTNErYLVNSWIENSS-GVKEKS----FIVTPPLFVSEPKSENTLRIIYAGPPLAA 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 111 DRESLFWFNVLEIPPKSKSKAkegESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSqkKEGNTLSLfaQNDSAYN 190
Cdd:PRK15195 102 DRESLFWMNVKAIPSVDKNAL---EGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFS--RSGNHLKV--HNPSPYY 174

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446170576 191 VSISNVkfKVGGKeyTVDSKSVLPFSGVSMPvkgLSNNINGTVIYNTINDNG 242
Cdd:PRK15195 175 VTLVNL--QVGSQ--KLGNAMIAPKVNSQIP---LPSGVQGKLKFQTVNDYG 219
PRK15295 PRK15295
fimbrial assembly chaperone;
30-242 1.17e-32

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 118.89  E-value: 1.17e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDgrdgVDPQEL-KLPFVITPPVSRIDPQKGQSLRITYMGSAL 108
Cdd:PRK15295  19 ASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSV----VDPQVTnKQAFIITPPLFRLDAGQKNSIRVIRSGAPL 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 109 PQDRESLFWFNVLEIPPKSKSKAKegeslNQLQLAFRTRIKLFFRPDGLKG-TPGDAAANLKWSqkKEGNTLSLfaQNDS 187
Cdd:PRK15295  95 PADRESMYWLNIKGIPSIDDNASA-----NRVEISINTQIKLIYRPPALTKsTPDSQSQQLKWQ--TAGDVITV--NNPT 165

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446170576 188 AYNVSISNVkfKVGGKEYTvDSKSVLPFSGVSMPVKGLSNNiNGTVIYNTINDNG 242
Cdd:PRK15295 166 PYYMNFASV--TLNSHEVK-SATFVPPKSSASFKLGSTAAP-HGTVTWRLISDYG 216
PRK15211 PRK15211
fimbrial chaperone;
30-244 1.76e-30

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 112.99  E-value: 1.76e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDgrdgVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSALP 109
Cdd:PRK15211  22 AAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDN----TTQGSSTVYMVPAPPFFKVRPKEKQIIRIMKTDSALP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 110 QDRESLFWFNVLEIPPKSkskaKEGESlNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQkKEGNTlslFAQNDSAY 189
Cdd:PRK15211  98 KDRESLFWLNVQEIPPKP----KASEG-NVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIH-RGGET---YLKNPTPY 168

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446170576 190 NVSISNVkfKVGGKEYTVDSK-----SVL-PFSGVSMPVKGLsnniNGTVIYNTINDNGGT 244
Cdd:PRK15211 169 YFAVTGV--KLNGQPVKLSDRvmneiAQLaPFSEVSLGKLSL----NGTVTVQAVNDWGGT 223
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 30-244 3.38e-28

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 107.17  E-value: 3.38e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWL----DDGRDGvdpqelKLPFVITPPVSRIDPQKGQSLRITYMG 105
Cdd:PRK15299  22 AGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAqsisETGASG------DAPFMVTPPLFRLNGGQKNVLRIIRTG 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 106 SALPQDRESLFWFNVLEIPPKSKSKAKegeslNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSqkKEGNTLSLfaQN 185
Cdd:PRK15299  96 GNLPEDRESLYWLDIKSIPSSNPDNKH-----NTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWS--RQGRTLTV--KN 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446170576 186 DSAYNVSISNVKFkvgGKEYTVDSKSVLPFSGVSMPVKGLSnniNGTVIYNTINDNGGT 244
Cdd:PRK15299 167 PTPYYMNFATLSV---GSQKVKAPRYVAPFGNAQYTLPAAA---SGPIAWSIINDFGGT 219
PRK15246 PRK15246
fimbrial assembly chaperone;
30-252 5.30e-28

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 106.97  E-value: 5.30e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMG-SAL 108
Cdd:PRK15246  10 AAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSrQQL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 109 PQDRESLFWFNVLEIPPKSKSKakeGESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSA 188
Cdd:PRK15246  90 ATDRESLFWLNIYQIPPVTQDI---KNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWYMS 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446170576 189 YNVSISNvkfkvggkEYTVDSKSVLPFSGVSMPVKGlSNNINGTVIYNTINDNGGTNKREAKID 252
Cdd:PRK15246 167 LTLTMDN--------KKSIGDIMVAPKTALDVPLTR-SPTPGASINYAVINDSGNWRQYTAILE 221
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
30-242 2.54e-27

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 105.17  E-value: 2.54e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTW-LDDGR-DGVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSA 107
Cdd:PRK15192  22 AGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHiLPGGRwPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTGAP 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 108 LPQDRESLFWFNVLEIpPKSKSKAkegeslNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLslfaQNDS 187
Cdd:PRK15192 102 LPADRESLFTLSIAAI-PSGKPEA------NRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATV----RNPT 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446170576 188 AYNVSIsnvkFKVGGKEYTVDSKSVL-PFSgvSMPVKGLSNNINGTVIYNTINDNG 242
Cdd:PRK15192 171 PYYVTL----FLLRANERAQDNAGVVaPFA--TRQTDWCRHTVRCTVRWQSINDYG 220
PRK15285 PRK15285
fimbrial chaperone StfD;
30-243 3.31e-27

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 105.25  E-value: 3.31e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNK-PLLVQTWLDDGRdGVdpqELKLPFVITPPVSRIDPQKGQSLRITYMGS-- 106
Cdd:PRK15285  25 AAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVEDEK-GV---KITSPLIVVPPVQRIEPSAIGQVKIQGMPAla 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 107 ALPQDRESLFWFNVLEIPPKSkskakegESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLfaQND 186
Cdd:PRK15285 101 SLPQDRETLFYYNVREIPPQS-------DKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQGNGYQV--SNP 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446170576 187 SAYNVSISNVKFKVGGKEYTVDSKSVL-PFSGVSMpvKGLSNNINGTVIYNTINDNGG 243
Cdd:PRK15285 172 TGYYVVLSNASNRMDGTPARGFSPLVIaPKSNVTL--GGDASELGHSPVLTYVNDYGA 227
PRK15224 PRK15224
pili assembly chaperone PapD;
32-243 1.24e-26

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 103.28  E-value: 1.24e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  32 IVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDdGRDGVDPQelklPFVITPPVSRIDPQKGQSLRITYMGSALPQD 111
Cdd:PRK15224  30 VKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVK-AADKSSPA----PFLVMPPLFRLEANQQSQLRIVRTGGDMPTD 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 112 RESLFWFNVLEIPPK---SKSKAKeGESLNqLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKkeGNTLSLfaQNDSA 188
Cdd:PRK15224 105 RETLQWVCIKAVPPEnepSDTQAK-GATLD-LNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVET--GNKLKV--ENPTP 178

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446170576 189 YNVSISNVkfKVGGKEYTvDSKSVLPFSGVSMPVKGlsnNINGTVIYNTINDNGG 243
Cdd:PRK15224 179 FYMNLASV--TVGGKPIT-GLEYIPPFADKTLNMPG---SAHGDIEWRVITDFGG 227
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 32-243 5.42e-24

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 96.77  E-value: 5.42e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  32 IVISGTRIVYPASSKDVIVNLDNrGNK--PLLVQTWLDDGRDGVDPQElklpFVITPPVSRIDPQKGQSLRITYMGSA-- 107
Cdd:PRK15274  28 IVPDRTRVIFNGNENSITVTLKN-GNAtlPYLAQAWLEDDKFAKDTRY----FTALPPLQRIEPKSDGQVKVQPLPAAas 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 108 LPQDRESLFWFNVLEIPPKSkskakegESLNQLQLAFRTRIKLFFRPDGL-----KGTPGDAAANLKWsqkkEGNtlSLF 182
Cdd:PRK15274 103 LPQDRESLFYFNVREIPPKS-------DKPNTLQLALQTRIKFFYRPVAVarqvdKTHPWQTKLTLTY----QGD--GVI 169

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446170576 183 AQNDSAYNVSISNVKFKVGGKEYTVDSKSVLPFSGVSMPVKGLSnnINGTVIYNTINDNGG 243
Cdd:PRK15274 170 FDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGAS--LGSSPVVGYVDDYGG 228
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 32-244 5.88e-24

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 95.99  E-value: 5.88e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  32 IVISGTRIVYPASSKDVIVNLDNRGNKPL-LVQTWLD--DGRDGVDpqelklpFVITPPVSRIDPQKGQSLRITYMGSAL 108
Cdd:PRK15188  29 IALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVAnaDGSRSTD-------FIITPPLFVIQPKKENILRIMYVGPSL 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 109 PQDRESLFWFNVLEIPPKSKSKAkegeSLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLSlfaqNDSA 188
Cdd:PRK15188 102 PTDRESVFYLNSKAIPSVDKNKL----TGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTIT----NPSP 173

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446170576 189 YNVSIsnVKFKVGGKEytVDSKSVLPFSGVSMPVKglsnniNGTVIYNTINDNGGT 244
Cdd:PRK15188 174 YYVSM--VELYSAGKK--LPNTMVPPKGAITLPAT------PGQVSLRTVNDFGAT 219
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 30-243 3.61e-23

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 94.07  E-value: 3.61e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRG-NKPLLVQTWLDDGrDGVDPQELklpfVITPPVSRIDPQKGQSLRITY---MG 105
Cdd:PRK15254  16 AAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDA-DGVRTDAL----MALPPLQRIDAGQKSQVRITQvrgLT 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 106 SALPQDRESLFWFNVLEIPPKSkskakegESLNQLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNtlsLFAQN 185
Cdd:PRK15254  91 DKLPQDRETLFWFNVRGVPPKP-------EDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGH---LTLRN 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446170576 186 DSAYNVSISNVKFKVGGKEYTVDSKSVLPFSGvSMPVKGLSNNINGTVIYNTINDNGG 243
Cdd:PRK15254 161 PTPYYITVAWLGADRSHRLSGFREGVMVPPLG-SLPLKAVLPAETRTLWVGYIDDYGG 217
PRK11385 PRK11385
fimbrial chaperone;
30-203 1.85e-15

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 73.24  E-value: 1.85e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRD--GVDPQELKLPFVITPPVSRIDPQKGQSLRITYMGS- 106
Cdd:PRK11385  26 AGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRwaGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRTESd 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 107 ALPQDRESLFWFNVLEIPpkskskakEGESLNQ-LQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKKEGNTLSlfaqN 185
Cdd:PRK11385 106 ILPVDRETLFELSIASVP--------SGKVENQsVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLT----N 173

                        170
                 ....*....|....*...
gi 446170576 186 DSAYNVSIsnVKFKVGGK 203
Cdd:PRK11385 174 PTPYYINL--IQVSVNGK 189
PRK15233 PRK15233
fimbrial chaperone SefB;
37-248 7.73e-14

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 68.98  E-value: 7.73e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  37 TRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDgrdgvDPQELKLPFVITPPVSRIDPQKGQSLRITYMGSALPQDRESLF 116
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKEYPILVQTQVYN-----DDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEESLY 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 117 WFNVLEIPP----KSKSKAKEGESLNqLQLAFRTRIKLFFRPDGLKGTPGDAAANLKWSQKkeGNtlSLFAQNDSAYNVS 192
Cdd:PRK15233 122 WLCVKGVPPlndnESNNKNNITTNLN-VNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERK--GN--SIVIKNPTSSYVN 196

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446170576 193 ISNVkfKVGGKEYTVDSKSVLPFSGVSMPvkglsNNINGTVIYNTINDNGGTNKRE 248
Cdd:PRK15233 197 IANI--KSGNLSFNIPNGYIEPFGYAQLP-----GGVHSKITLTILDDNGAEIIRD 245
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 30-214 3.75e-12

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 63.91  E-value: 3.75e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576  30 ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDgrdgvDPQELKLPFVITPPVSRIDPQKGQSLRITyMGSALP 109
Cdd:PRK09918  24 AGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTTLVD-----LPEDKSKLLLVTPPVARVEPGQSQQVRFI-LKSGSP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446170576 110 QDRESLFWFNVLEIPPKSKSKAKEGESLNQlqlafrtRIKLFFRPDGLkgtPGDAAA--NLKWSqkKEGNTLSLfaQNDS 187
Cdd:PRK09918  98 LNTEHLLRVSFEGVPPKPGGKNKVVMPIRQ-------DLPVLIQPAAL---PVVRDPwkLLVWS--ISGNNLVV--SNPS 163

                        170       180
                 ....*....|....*....|....*...
gi 446170576 188 AYNVSIS-NVKFKVGGKEYTVDSKSVLP 214
Cdd:PRK09918 164 PYVVRLGqQVILLPSGKVVALPKPYILP 191
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 185-246 1.63e-08

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 49.95  E-value: 1.63e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446170576  185 NDSAYNVSISNVKFKVGGKEYTVDSKSVLPFSGVSMPVKGLSNNiNGTVIYNTINDNGGTNK 246
Cdd:pfam02753   3 NPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTFAGLPAPAA-GGTVSYTYINDYGGIVP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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