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Conserved domains on  [gi|446161374|ref|WP_000239229|]
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MULTISPECIES: DUF3042 family protein [Bacilli]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3042 super family cl12787
Protein of unknown function (DUF3042); This family of proteins with unknown function appears ...
 7-57 3.18e-09

Protein of unknown function (DUF3042); This family of proteins with unknown function appears to be restricted to Firmicutes.


The actual alignment was detected with superfamily member pfam11240:

Pssm-ID: 463245  Cd Length: 54  Bit Score: 46.91  E-value: 3.18e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446161374   7 FAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVS 57
Cdd:pfam11240  4 FGKGFLTGVAATIAALAGAVFTFKKTVIEPIEEKEAKIEENRKRAARKRRS 54
 
Name Accession Description Interval E-value
DUF3042 pfam11240
Protein of unknown function (DUF3042); This family of proteins with unknown function appears ...
 7-57 3.18e-09

Protein of unknown function (DUF3042); This family of proteins with unknown function appears to be restricted to Firmicutes.


Pssm-ID: 463245  Cd Length: 54  Bit Score: 46.91  E-value: 3.18e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446161374   7 FAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVS 57
Cdd:pfam11240  4 FGKGFLTGVAATIAALAGAVFTFKKTVIEPIEEKEAKIEENRKRAARKRRS 54
 
Name Accession Description Interval E-value
DUF3042 pfam11240
Protein of unknown function (DUF3042); This family of proteins with unknown function appears ...
 7-57 3.18e-09

Protein of unknown function (DUF3042); This family of proteins with unknown function appears to be restricted to Firmicutes.


Pssm-ID: 463245  Cd Length: 54  Bit Score: 46.91  E-value: 3.18e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446161374   7 FAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVS 57
Cdd:pfam11240  4 FGKGFLTGVAATIAALAGAVFTFKKTVIEPIEEKEAKIEENRKRAARKRRS 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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