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Conserved domains on  [gi|446158125|ref|WP_000235980|]
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MULTISPECIES: tail fiber domain-containing protein [Enterobacteriaceae]

Protein Classification

tail fiber domain-containing protein( domain architecture ID 10620719)

tail fiber domain-containing protein similar to Enterobacteria phage long tail fiber protein p37, a structural component of the distal-half tail fiber

Gene Ontology:  GO:0098024|GO:0019062|GO:0046718
MEROPS:  S74
PubMed:  17158460

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidase_S74 pfam13884
Chaperone of endosialidase; This is the very C-terminal, chaperone, domain of the ...
116-170 7.80e-07

Chaperone of endosialidase; This is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the final residue of the End-tail-spike family, pfam12219. The endosialidase protein forms homotrimeric molecules in bacteriophages. The catalytic dyad allows this portion of the molecule to be cleaved from the more N-terminal region such that the latter can fold and bind to polysialic acid in the bacterial outer envelope.


:

Pssm-ID: 404724  Cd Length: 56  Bit Score: 44.93  E-value: 7.80e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446158125  116 SSIRYKHSVETIDSEHADLIFRMRPVWYR----SQCENDRRDWGFyglIAEEVGEIAPQ 170
Cdd:pfam13884   1 SDRRLKTNIKPIDENALDKIEQLEPVSYDykdeKGEDGARRHIGV---IAQEVEEVFPE 56
 
Name Accession Description Interval E-value
Peptidase_S74 pfam13884
Chaperone of endosialidase; This is the very C-terminal, chaperone, domain of the ...
116-170 7.80e-07

Chaperone of endosialidase; This is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the final residue of the End-tail-spike family, pfam12219. The endosialidase protein forms homotrimeric molecules in bacteriophages. The catalytic dyad allows this portion of the molecule to be cleaved from the more N-terminal region such that the latter can fold and bind to polysialic acid in the bacterial outer envelope.


Pssm-ID: 404724  Cd Length: 56  Bit Score: 44.93  E-value: 7.80e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446158125  116 SSIRYKHSVETIDSEHADLIFRMRPVWYR----SQCENDRRDWGFyglIAEEVGEIAPQ 170
Cdd:pfam13884   1 SDRRLKTNIKPIDENALDKIEQLEPVSYDykdeKGEDGARRHIGV---IAQEVEEVFPE 56
 
Name Accession Description Interval E-value
Peptidase_S74 pfam13884
Chaperone of endosialidase; This is the very C-terminal, chaperone, domain of the ...
116-170 7.80e-07

Chaperone of endosialidase; This is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the final residue of the End-tail-spike family, pfam12219. The endosialidase protein forms homotrimeric molecules in bacteriophages. The catalytic dyad allows this portion of the molecule to be cleaved from the more N-terminal region such that the latter can fold and bind to polysialic acid in the bacterial outer envelope.


Pssm-ID: 404724  Cd Length: 56  Bit Score: 44.93  E-value: 7.80e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446158125  116 SSIRYKHSVETIDSEHADLIFRMRPVWYR----SQCENDRRDWGFyglIAEEVGEIAPQ 170
Cdd:pfam13884   1 SDRRLKTNIKPIDENALDKIEQLEPVSYDykdeKGEDGARRHIGV---IAQEVEEVFPE 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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