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Conserved domains on  [gi|446092663|ref|WP_000170518|]
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MULTISPECIES: fimbria/pilus periplasmic chaperone [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK15285 super family cl33121
fimbrial chaperone StfD;
5-248 7.55e-109

fimbrial chaperone StfD;


The actual alignment was detected with superfamily member PRK15285:

Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 314.03  E-value: 7.55e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   5 LSAKTLTTVLSLLAATVSfSAQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKISSPLAVLPPVQR 84
Cdd:PRK15285   4 LKRYNLAAVLLLLLGGYG-SAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  85 IEAMMNGQVKIQGLPDIHKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWRPKALEKNTTQNPWQHKVTLTRN 164
Cdd:PRK15285  83 IEPSAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQ 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 165 GQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMSPKTSAPLN---VKMGSVPVLTYVNDYGARMPLFFTCNGNSCQV 241
Cdd:PRK15285 163 GNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVTLGgdaSELGHSPVLTYVNDYGARLPLIFNCTDNSCAV 242

                 ....*..
gi 446092663 242 DEEQSRK 248
Cdd:PRK15285 243 DEAKSRK 249
 
Name Accession Description Interval E-value
PRK15285 PRK15285
fimbrial chaperone StfD;
5-248 7.55e-109

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 314.03  E-value: 7.55e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   5 LSAKTLTTVLSLLAATVSfSAQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKISSPLAVLPPVQR 84
Cdd:PRK15285   4 LKRYNLAAVLLLLLGGYG-SAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  85 IEAMMNGQVKIQGLPDIHKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWRPKALEKNTTQNPWQHKVTLTRN 164
Cdd:PRK15285  83 IEPSAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQ 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 165 GQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMSPKTSAPLN---VKMGSVPVLTYVNDYGARMPLFFTCNGNSCQV 241
Cdd:PRK15285 163 GNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVTLGgdaSELGHSPVLTYVNDYGARLPLIFNCTDNSCAV 242

                 ....*..
gi 446092663 242 DEEQSRK 248
Cdd:PRK15285 243 DEAKSRK 249
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-233 1.94e-68

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 211.00  E-value: 1.94e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   1 MTKYLSAktltTVLSLLAATVSFSAQASVTPDRTRLIFNESDKSISVTLRNNDPKlPYLAQSWIEDEKGV----KISSPL 76
Cdd:COG3121    1 MKRLLRL----LLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQDagpdKATAPF 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  77 AVLPPVQRIEAMMNGQVKIQGLPDihKLPADRESMFYFNVREIPPK---SNKSNTLQIALQTRIKLFWRPKALEKNTTQn 153
Cdd:COG3121   76 VVTPPLFRLEPGKSQTVRIIRTGP--PLPQDRESLFRLNVDEIPPKdasEEGKNTLQIALRTRIKLFYRPAGLKGSPED- 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 154 pWQHKVTLTRNGQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMsPKTSAPLNVKMGSVP------VLTYVNDYGAR 227
Cdd:COG3121  153 -AAEKLTWSLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVL-PGSTRRWPLPAGASLaaggkvTWATINDYGGA 230

                 ....*.
gi 446092663 228 MPLFFT 233
Cdd:COG3121  231 VPLEAT 236
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
29-146 4.41e-44

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 144.65  E-value: 4.41e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   29 VTPDRTRLIFNESDKSISVTLRNNDpKLPYLAQSWIEDEKG----VKISSPLAVLPPVQRIEAMMNGQVKIQGLPDihKL 104
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTG-DNPYLVQSWVDDGNEegtdEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGP--PL 77
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446092663  105 PADRESMFYFNVREIPPKS---NKSNTLQIALQTRIKLFWRPKAL 146
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDkpkGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK15285 PRK15285
fimbrial chaperone StfD;
5-248 7.55e-109

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 314.03  E-value: 7.55e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   5 LSAKTLTTVLSLLAATVSfSAQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKISSPLAVLPPVQR 84
Cdd:PRK15285   4 LKRYNLAAVLLLLLGGYG-SAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  85 IEAMMNGQVKIQGLPDIHKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWRPKALEKNTTQNPWQHKVTLTRN 164
Cdd:PRK15285  83 IEPSAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQ 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 165 GQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMSPKTSAPLN---VKMGSVPVLTYVNDYGARMPLFFTCNGNSCQV 241
Cdd:PRK15285 163 GNGYQVSNPTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVTLGgdaSELGHSPVLTYVNDYGARLPLIFNCTDNSCAV 242

                 ....*..
gi 446092663 242 DEEQSRK 248
Cdd:PRK15285 243 DEAKSRK 249
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
2-247 1.09e-82

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 247.77  E-value: 1.09e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   2 TKYLSAKTLTTVLSLLAATVSFSAqasVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKISSPLAVLPP 81
Cdd:PRK15274   4 TNHFKRQALIASVLLAAPLVSHSA---IVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  82 VQRIEAMMNGQVKIQGLPDIHKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWRPKALEKNTTQ-NPWQHKVT 160
Cdd:PRK15274  81 LQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKtHPWQTKLT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 161 LTRNGQEFTVNNPTPYYVIFSNASAQKNgNPAAGFSPIVMSP--KTSAPLN-VKMGSVPVLTYVNDYGARMPLFFTCNGN 237
Cdd:PRK15274 161 LTYQGDGVIFDNPTPFYLVISNAGSKEN-ETASGFKNLLIAPreKVTSPIKgASLGSSPVVGYVDDYGGHRLLVFTCSGN 239
                        250
                 ....*....|
gi 446092663 238 SCQVDEEQSR 247
Cdd:PRK15274 240 TCKVNEEKTR 249
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-233 1.94e-68

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 211.00  E-value: 1.94e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   1 MTKYLSAktltTVLSLLAATVSFSAQASVTPDRTRLIFNESDKSISVTLRNNDPKlPYLAQSWIEDEKGV----KISSPL 76
Cdd:COG3121    1 MKRLLRL----LLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQDagpdKATAPF 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  77 AVLPPVQRIEAMMNGQVKIQGLPDihKLPADRESMFYFNVREIPPK---SNKSNTLQIALQTRIKLFWRPKALEKNTTQn 153
Cdd:COG3121   76 VVTPPLFRLEPGKSQTVRIIRTGP--PLPQDRESLFRLNVDEIPPKdasEEGKNTLQIALRTRIKLFYRPAGLKGSPED- 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 154 pWQHKVTLTRNGQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMsPKTSAPLNVKMGSVP------VLTYVNDYGAR 227
Cdd:COG3121  153 -AAEKLTWSLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVL-PGSTRRWPLPAGASLaaggkvTWATINDYGGA 230

                 ....*.
gi 446092663 228 MPLFFT 233
Cdd:COG3121  231 VPLEAT 236
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
13-239 2.65e-52

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 169.95  E-value: 2.65e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  13 VLSLLAATVSFSAQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKISSPLAvLPPVQRIEAMMNGQ 92
Cdd:PRK15254   2 ILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMA-LPPLQRIDAGQKSQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  93 VKI---QGLPDihKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWRPKALEKNTTQNPwQHKVTLTRNGQEFT 169
Cdd:PRK15254  81 VRItqvRGLTD--KLPQDRETLFWFNVRGVPPKPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQP-ERKLTAERNAGHLT 157
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446092663 170 VNNPTPYYVIFSNASAQKNgNPAAGFSPIVMSPKT-SAPLNVKMgsvPVLT------YVNDYGARMPLFFTCNGNSC 239
Cdd:PRK15254 158 LRNPTPYYITVAWLGADRS-HRLSGFREGVMVPPLgSLPLKAVL---PAETrtlwvgYIDDYGGLQMNRYACDALNC 230
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
29-146 4.41e-44

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 144.65  E-value: 4.41e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   29 VTPDRTRLIFNESDKSISVTLRNNDpKLPYLAQSWIEDEKG----VKISSPLAVLPPVQRIEAMMNGQVKIQGLPDihKL 104
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTG-DNPYLVQSWVDDGNEegtdEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGP--PL 77
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446092663  105 PADRESMFYFNVREIPPKS---NKSNTLQIALQTRIKLFWRPKAL 146
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDkpkGGQNGLQLALRSRIKLFYRPAGL 122
PRK09926 PRK09926
fimbrial chaperone;
4-225 9.44e-44

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 147.94  E-value: 9.44e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   4 YLSAKTLTTVLSLLAATVSFSAQASVTPDRTRLIFNESDKSISVTLRNNDPKlPYLAQSWIED-----EKGvKISSPLAV 78
Cdd:PRK09926   2 FFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNN-PLLVQSWLDTgddnaEPG-SIKVPFTA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  79 LPPVQRIEAMMNGQVKIQGLPDiHKLPADRESMFYFNVREIPPKSNKS-----NTLQIALQTRIKLFWRPKALEKNTTQN 153
Cdd:PRK09926  80 TPPVSRIDPKRGQTIKLMYTAS-TALPKDRESVFWFNVLEVPPKPDAEkvanqSLLQLAFRTRIKLFYRPDGLKGNPSEA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 154 PWQHKVTLTRNGQE--FTVNNPTPYYVIFSNASAQKNGNP-------AAGFSPIVMSPKTsapLNVKMGSVPVLTY-VND 223
Cdd:PRK09926 159 PLALKWSWAGSEGKasLRVTNPTPYYVSFSSGDLEAGGKRypvdskmIAPFSDESMKVKG---LSGKASSGKVHFYaIND 235

                 ..
gi 446092663 224 YG 225
Cdd:PRK09926 236 FG 237
lfpB PRK15290
fimbrial chaperone;
1-226 2.53e-32

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 118.17  E-value: 2.53e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   1 MTKYLSAKTLTTV-LSLLAATVSfSAQASVTPDRTRLIF--NESDKSISVTlrNNDPKLPYLAQSWIED-EKGVKISSPL 76
Cdd:PRK15290  11 FKTTVSCKLFTAIiLSVFLGQPA-LTYAGVVIGGTRVVYlsNNPDKSISVF--SKEEKIPYLIQAWVDPfNKEDKSKAPF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  77 AVLPPVQRIEAMMNGQVKIqglpdIH----KLPADRESMFYFNVREIPPK-SNK-SNTLQIALQTRIKLFWRPKAL---- 146
Cdd:PRK15290  88 TVIPPVSRLEPSQEKVLRI-----IHtkgvSLPDDRESVFWLNIKNIPPSaSNKaTNSLEIAVKTRIKLFWRPASIrlip 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 147 EKNTTQNPWQhkvtltRNGQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIvmsPKTSAPLNVKM-GSVPVLTYVNDYG 225
Cdd:PRK15290 163 EDAAPKVKWR------REGRNLIAENPNPIHISVMDVIVDGHDVPLNMIRPF---ETLTLPLPANSaGGQMTWRFINDYG 233

                 .
gi 446092663 226 A 226
Cdd:PRK15290 234 A 234
PRK15195 PRK15195
molecular chaperone FimC;
16-229 1.44e-31

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 115.73  E-value: 1.44e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  16 LLAATVSFSAQAS--VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKISSpLAVLPPVQRIEAMMNGQV 93
Cdd:PRK15195  12 IFYLIISASVHAAggIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKS-FIVTPPLFVSEPKSENTL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  94 KI--QGLPdihkLPADRESMFYFNVREIPP----KSNKSNTLQIALQTRIKLFWRPKALEKNTTQNPWQHKvtLTRNGQE 167
Cdd:PRK15195  91 RIiyAGPP----LAADRESLFWMNVKAIPSvdknALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLK--FSRSGNH 164
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446092663 168 FTVNNPTPYYVIFSNAS--AQKNGNpaagfspIVMSPKTSAPLNVKMGSVPVLTY--VNDYGARMP 229
Cdd:PRK15195 165 LKVHNPSPYYVTLVNLQvgSQKLGN-------AMIAPKVNSQIPLPSGVQGKLKFqtVNDYGAVTP 223
PRK15208 PRK15208
molecular chaperone LpfB;
8-226 7.73e-31

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 113.85  E-value: 7.73e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   8 KTLTTVLSLLAATVSFSAQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKiSSPLAVLPPVQRIEA 87
Cdd:PRK15208   2 RLISFTALALALIAQNSFAGGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNK-KTPFIITPPLFKLDP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  88 MMNGQVKIQGLPDihKLPADRESMFYFNVREIPPKSNKS---NTLQIALQTRIKLFWRPKALEKNTTQNPwqHKVTLTRN 164
Cdd:PRK15208  81 TKNNVLRIVNITN--TLPQDRESVYWINVKAIPAKSEDAenkNVLQIAVRTRLKLFYRPAGLKGNSMDAW--NKLRFTRA 156
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446092663 165 GQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMSPKTSAPLNVkmGSVPVLTY--VNDYGA 226
Cdd:PRK15208 157 GNQIKVENPSAFNLTFNQFYANGRDIEKAGMVPAKGSLNIELPAGT--GKVSEVKYniINDFGT 218
PRK15211 PRK15211
fimbrial chaperone;
6-227 3.10e-30

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 112.22  E-value: 3.10e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   6 SAKTLTTVLSLLAatVSFSAQASVTPDRTRLIFNESDKSISVTLRNNDPKLpYLAQSWIEDEKGVKISSPLAVLPPVQRI 85
Cdd:PRK15211   3 MMKWGLVSLLSLA--VCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQT-YGGQVWIDNTTQGSSTVYMVPAPPFFKV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  86 EAMMNGQVKIQGLPDIhkLPADRESMFYFNVREIP--PKSNKSNTLQIALQTRIKLFWRPKALeKNTTQNPwQHKVTLTR 163
Cdd:PRK15211  80 RPKEKQIIRIMKTDSA--LPKDRESLFWLNVQEIPpkPKASEGNVLAVALNTQVKLIYRPKAL-KEGRENA-EKNLQIIH 155
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446092663 164 NGQEFTVNNPTPYYviFSNASAQKNGNPAAGFSPI-----VMSPKTSAPLNVKM--GSVPVLTyVNDYGAR 227
Cdd:PRK15211 156 RGGETYLKNPTPYY--FAVTGVKLNGQPVKLSDRVmneiaQLAPFSEVSLGKLSlnGTVTVQA-VNDWGGT 223
PRK15295 PRK15295
fimbrial assembly chaperone;
14-227 1.19e-29

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 110.80  E-value: 1.19e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  14 LSLLAATVSFS-AQASVTPDRTRLIFNESDKSISVTLRNNDPKlPYLAQSWIED-EKGVKISSPLAVLPPVQRIEAMMNG 91
Cdd:PRK15295   5 KSVLVVLLTSHvAHASIVVGGTRLVFDGNNDESSINVENKDSK-ANLVQSWLSVvDPQVTNKQAFIITPPLFRLDAGQKN 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  92 QVKIqgLPDIHKLPADRESMFYFNVREIPPKSN--KSNTLQIALQTRIKLFWRPKALEKNTTQNpWQHKVTLTRNGQEFT 169
Cdd:PRK15295  84 SIRV--IRSGAPLPADRESMYWLNIKGIPSIDDnaSANRVEISINTQIKLIYRPPALTKSTPDS-QSQQLKWQTAGDVIT 160
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446092663 170 VNNPTPYYVIFSNASAQKNGNPAAGFSPivmsPKTSA--PLNVKMGSVPVLTY--VNDYGAR 227
Cdd:PRK15295 161 VNNPTPYYMNFASVTLNSHEVKSATFVP----PKSSAsfKLGSTAAPHGTVTWrlISDYGMS 218
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
22-229 6.28e-29

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 109.10  E-value: 6.28e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  22 SFSAQASVTPDRTRLIFNESDKSISVTLRNNDpKLPYLAQSWIED--EKGVKISSPLAVLPPVQRIEAMMNGQVKIqgLP 99
Cdd:PRK15299  17 SLAHAAGINIGTTRVIFHGDAKDASISISNSD-NVPYLIQSWAQSisETGASGDAPFMVTPPLFRLNGGQKNVLRI--IR 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 100 DIHKLPADRESMFYFNVREIPPKS--NKSNTLQIALQTRIKLFWRPKALekntTQNPWQ--HKVTLTRNGQEFTVNNPTP 175
Cdd:PRK15299  94 TGGNLPEDRESLYWLDIKSIPSSNpdNKHNTLMLAVKAEFKLIYRPKAL----TQKPEEvaDRLTWSRQGRTLTVKNPTP 169
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446092663 176 YYVIFSNASAQkngnpaagfSPIVMSPKTSAPLNVKMGSVPVL-------TYVNDYGARMP 229
Cdd:PRK15299 170 YYMNFATLSVG---------SQKVKAPRYVAPFGNAQYTLPAAasgpiawSIINDFGGTGP 221
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
8-225 1.07e-28

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 108.60  E-value: 1.07e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663   8 KTLTTVLslLAATVsFSAQASVTPDRTRLIFNESDKSISVTLRNNDPKLPyLAQSWIEDEKGV----KISSPLAVLPPVQ 83
Cdd:PRK15253  17 KILSAVL--LSAII-LPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQAS-LVQSWIDDGNTSlppeKIQVPFMLTPPVA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  84 RIEAMMNGQVKIQGLPDihKLPADRESMFYFNVREIPPKSNKS---NTLQIALQTRIKLFWRPKALEKnTTQNPWQhKVT 160
Cdd:PRK15253  93 RVAAESGQQIKIKKMPN--SLPDNKESLFYLNVLDIPPNSQENagkNVLKFAMQNRIKLIWRPSRIAA-VTKDSFQ-RIG 168
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446092663 161 LTRNGQEFTVNNPTPYYVIFSNASAqknGNPAAGFSPIVMSPKTSAPLNVKMGSVPV--LTYVNDYG 225
Cdd:PRK15253 169 LFRSNKTVIMKNDTANWITVTDVKA---GNTKINDQTIMLPPLSTQNINMKYASTSQyeVTIIDDNG 232
PRK15249 PRK15249
fimbrial chaperone;
13-228 1.12e-28

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 109.12  E-value: 1.12e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  13 VLSLLAATVSFSAQASVTPDRTRLIFNESDKSISVTLRNNDpKLPYLAQSWIED-------EKGVKIssPLAVLPPVQRI 85
Cdd:PRK15249  14 IVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNND-AIPYIVQTWFDDgdmntspENSSAM--PFIATPPVFRI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  86 EAMmNGQVKIQGLPDIHKLPADRESMFYFNVREIPP----KSNKSNTLQIALQTRIKLFWRPKALEK--NTTQNPWQHKV 159
Cdd:PRK15249  91 QPK-AGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPtnigSDSGQNKMLVMLRSRIKLFYRPDGLGKpdNLAKKLQIKTV 169
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446092663 160 TLTRNGQEFTVNNPTPYYVIFSNASAQKNGNPA---AGFSPIVMSPKTSAPLNVKM----GSVPVlTYVNDYGARM 228
Cdd:PRK15249 170 NKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYnldADMIAPFSSQTWWLPGKRSLksfsGTVTV-TLVNDQGARI 244
PRK15218 PRK15218
fimbrial assembly chaperone;
13-225 7.98e-24

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 95.43  E-value: 7.98e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  13 VLSLLAATVSFSAQASVTPDRTRLIFNESDKSISVTLRNNDpKLPYLAQSWIEDEKGV----KISSPLAVLPPVQRIEAM 88
Cdd:PRK15218   4 MIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDG-KRSSLIQAWIDNGDTSlppeKLQVPFIMTPPVIRVAAN 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  89 MNGQVKIQGLPdiHKLPADRESMFYFNVREIPPKSNKS---NTLQIALQTRIKLFWRPKALEKnTTQNPWQhKVTLTRNG 165
Cdd:PRK15218  83 SGQQLKIKKLA--NNLPGDRESLFYLNVLDIPPNSDENkdkNIIKFALQNRIKLIYRPPGVQK-VDKATFS-RLQLLRAP 158
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446092663 166 QEFTVNNPTPYYVIFSNASAQKNGNPAAgfspIVMSPKTSAPLNVKMG-SVPVLTYVNDYG 225
Cdd:PRK15218 159 GSISVKNNSANWITIPEIKAKSKVNKET----LLLAPWSSQSITTTVVvNSYTVTLIDDSG 215
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
10-229 1.87e-21

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 89.44  E-value: 1.87e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  10 LTTVLSLLAATVSFSAQAS-VTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGVKiSSPLAVLPPVQRIEAM 88
Cdd:PRK15188   9 LRLLLLLSAAGLSFAAQAGgIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSR-STDFIITPPLFVIQPK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  89 MNGQVKIQGLPDihKLPADRESMFYFNVREIPP-KSNK--SNTLQIALQTRIKLFWRPKALEKNTTQNPWQHKVTLTRNg 165
Cdd:PRK15188  88 KENILRIMYVGP--SLPTDRESVFYLNSKAIPSvDKNKltGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERG- 164
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446092663 166 qEFTVNNPTPYYVIFSNASAQKNGNPAAgfspiVMSPKTSAPLNVKMGSVPVLTyVNDYGARMP 229
Cdd:PRK15188 165 -QLTITNPSPYYVSMVELYSAGKKLPNT-----MVPPKGAITLPATPGQVSLRT-VNDFGATTP 221
PRK15246 PRK15246
fimbrial assembly chaperone;
25-216 1.97e-21

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 89.25  E-value: 1.97e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  25 AQASVTPDRTRLIFNESDKSISVTLRNNDPKlPYLAQSWIeDEKGVKIS-----SPLAVLPPVQRieaMMNGQVKIQG-- 97
Cdd:PRK15246   8 AQAAVNIDRTRIIFASDDVAQSLTLSNDNTT-PMLLQVWT-DAGNIDASpdnskTPLVALPPVFK---MQPGELRTLRll 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  98 LPDIHKLPADRESMFYFNVREIPPKSNKSNT----LQIALQTRIKLFWRPKALEKNTTQNpwQHKVTLTRNGQEFTVNNP 173
Cdd:PRK15246  83 LSSRQQLATDRESLFWLNIYQIPPVTQDIKNhprkLVLPLRLRLKILIRPTGLKAPTEAE--EKKLRFIAKENTIRIVNP 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 446092663 174 TPYYVIFSNASAQKngnpaAGFSPIVMSPKTSAPLNVKMGSVP 216
Cdd:PRK15246 161 TSWYMSLTLTMDNK-----KSIGDIMVAPKTALDVPLTRSPTP 198
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
25-196 7.65e-17

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 77.05  E-value: 7.65e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  25 AQASVTPDRTRLIFNESDKSISVTLRNNDPKlpylaqSWIEDE-----------KGVKISSPLAVLPPVQRIEAMMNGQV 93
Cdd:PRK15192  20 AQAGVVIGGTRFIYHAGAPALSVPVSNHSEA------SWLIDThilpggrwpgtKNEGNITPFVVTPPLFMLSARQENSM 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  94 KI--QGLPdihkLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWRPKALEKNtTQNPWQHKV-TLTRNGQefTV 170
Cdd:PRK15192  94 RVvyTGAP----LPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGN-PQQAYRHLIwSLTPDGA--TV 166
                        170       180       190
                 ....*....|....*....|....*....|
gi 446092663 171 NNPTPYYVIF----SNASAQKNGNPAAGFS 196
Cdd:PRK15192 167 RNPTPYYVTLfllrANERAQDNAGVVAPFA 196
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
10-178 1.44e-16

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 76.23  E-value: 1.44e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  10 LTTVLSLLAATVSFSAQASVTPDRTRLIFNESDKSISVTLRNND--PKLPYLAQSWIEDEKGVKisspLAVLPPVQRIEA 87
Cdd:PRK09918   7 FLFTALVLLSSSSAVHAAGMVPETSVVIVEESDGEGSINVKNTDsnPILLYTTLVDLPEDKSKL----LLVTPPVARVEP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  88 MMNGQVK--IQGlpdihKLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWRPKALEKNTTqnPWQHkVTLTRNG 165
Cdd:PRK09918  83 GQSQQVRfiLKS-----GSPLNTEHLLRVSFEGVPPKPGGKNKVVMPIRQDLPVLIQPAALPVVRD--PWKL-LVWSISG 154
                        170
                 ....*....|...
gi 446092663 166 QEFTVNNPTPYYV 178
Cdd:PRK09918 155 NNLVVSNPSPYVV 167
PRK11385 PRK11385
fimbrial chaperone;
13-226 1.49e-16

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 76.33  E-value: 1.49e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  13 VLSLLAATvsfSAQASVTPDRTRLIFNESDKSISVTLRNNDpklpylAQSWIEDEK-----------GVKISSPLAVLPP 81
Cdd:PRK11385  15 VLSLLVAG---ELQAGVVVGGTRFIFPADRESISILLTNTS------QESWLINSKinrptrwaggeASTVPAPLLAAPP 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  82 VQRIEAMMNGQVKI-QGLPDIhkLPADRESMFYFNVREIPPKSNKSNTLQIALQTRIKLFWRPKALEKNTTQNPWQhkVT 160
Cdd:PRK11385  86 LILLKPGTTGTLRLlRTESDI--LPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQ--LR 161
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446092663 161 LTRNGQEFTVNNPTPYYVIFSNASAQKNGNPAAGFSPIVMSPKTS-----APLNVKMGSvpvltyVNDYGA 226
Cdd:PRK11385 162 WTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSwcqaiAPCHVAWRA------INDYGG 226
PRK15233 PRK15233
fimbrial chaperone SefB;
34-228 1.55e-13

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 68.21  E-value: 1.55e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  34 TRLIFNESDKSISVTLRNnDPKLPYLAQSWI-EDEKGVKisSPLAVLPPVQRIEAmmNGQVKIQGLPDIHKLPADRESMF 112
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMN-EKEYPILVQTQVyNDDKSSK--APFIVTPPILKVES--NARTRLKVIPTSNLFNKNEESLY 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663 113 YFNVREIPP----KSNKSNTLQIALQTR------IKLFWRPKALEKNTTQnpWQHKVTLTRNGQEFTVNNPTPYYVIFSN 182
Cdd:PRK15233 122 WLCVKGVPPlndnESNNKNNITTNLNVNvvtnscIKLIYRPKTIDLTTME--IADKLKLERKGNSIVIKNPTSSYVNIAN 199
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 446092663 183 AsaqKNGNPAAGFSPIVMSPKTSAPLNVKMGSVPVLTYVNDYGARM 228
Cdd:PRK15233 200 I---KSGNLSFNIPNGYIEPFGYAQLPGGVHSKITLTILDDNGAEI 242
PRK15224 PRK15224
pili assembly chaperone PapD;
16-214 6.38e-12

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 63.22  E-value: 6.38e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  16 LLAATVSFSAQASVTpdrtRLIFNESdkSISVTLRNNDPK-LPYLAQSWIEDEKGVKiSSPLAVLPPVQRIEAMMNGQVK 94
Cdd:PRK15224  21 LNLNTKSFSVKLGAT----RVIYHAG--TAGATLSVSNPQnYPILVQSSVKAADKSS-PAPFLVMPPLFRLEANQQSQLR 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446092663  95 IqgLPDIHKLPADRESMFYFNVREIPPKSNKSNT--------LQIALQTRIKLFWRPKALeKNTTQNPwQHKVTLTRNGQ 166
Cdd:PRK15224  94 I--VRTGGDMPTDRETLQWVCIKAVPPENEPSDTqakgatldLNLSINVCDKLIFRPDAV-KGTPEDV-AGNLRWVETGN 169
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 446092663 167 EFTVNNPTPYYVifSNASAQKNGNPAAGFSPIvmSPKTSAPLNVKMGS 214
Cdd:PRK15224 170 KLKVENPTPFYM--NLASVTVGGKPITGLEYI--PPFADKTLNMPGSA 213
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
170-229 2.26e-11

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 57.66  E-value: 2.26e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446092663  170 VNNPTPYYVIFSNASAQKNGNPAAGFSPIVmSPKTSAPLNVKM----GSVPVLTYVNDYGARMP 229
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGMV-APFSSQTFAGLPapaaGGTVSYTYINDYGGIVP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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