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Conserved domains on  [gi|446064944|ref|WP_000142799|]
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MULTISPECIES: molecular chaperone [Enterobacteriaceae]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
7-222 7.66e-70

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 214.08  E-value: 7.66e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   7 LPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKlPYLAYSWIENEKG----EKSDALLVALPPIQRLEPKA 82
Cdd:COG3121   10 LALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQdagpDKATAPFVVTPPLFRLEPGK 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  83 TSQVRVVKQASttQLPGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVElQLQVSQQGNQ 162
Cdd:COG3121   89 SQTVRIIRTGP--PLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAE-KLTWSLVGNG 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446064944 163 LTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFST----VNTNTGSYSGSQFYLGYMDDYGA 222
Cdd:COG3121  166 LTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTrrwpLPAGASLAAGGKVTWATINDYGG 229
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
7-222 7.66e-70

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 214.08  E-value: 7.66e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   7 LPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKlPYLAYSWIENEKG----EKSDALLVALPPIQRLEPKA 82
Cdd:COG3121   10 LALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQdagpDKATAPFVVTPPLFRLEPGK 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  83 TSQVRVVKQASttQLPGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVElQLQVSQQGNQ 162
Cdd:COG3121   89 SQTVRIIRTGP--PLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAE-KLTWSLVGNG 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446064944 163 LTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFST----VNTNTGSYSGSQFYLGYMDDYGA 222
Cdd:COG3121  166 LTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTrrwpLPAGASLAAGGKVTWATINDYGG 229
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 10-236 1.32e-59

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 188.84  E-value: 1.32e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  10 MLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVALPPIQRLEPKATSQVRVV 89
Cdd:PRK15274  16 VLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQ 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  90 KQASTTQLPGDRETLFFYNMREIPPAPDKSSdhaILQVAIQSRIKLFWRPAALRKKAGEKVELQ--LQVSQQGNQLTLKN 167
Cdd:PRK15274  96 PLPAAASLPQDRESLFYFNVREIPPKSDKPN---TLQLALQTRIKFFYRPVAVARQVDKTHPWQtkLTLTYQGDGVIFDN 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446064944 168 PTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTN-TGSYSGSQFYLGYMDDYGALRMTTLNCSGQ-CRL 236
Cdd:PRK15274 173 PTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPiKGASLGSSPVVGYVDDYGGHRLLVFTCSGNtCKV 243
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-142 1.67e-43

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 143.11  E-value: 1.67e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   22 VQPDRTRIVFNANDKATSLRIENQSDKlPYLAYSWIENEKG----EKSDALLVALPPIQRLEPKATSQVRVVKQASttQL 97
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEegtdEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGP--PL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446064944   98 PGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAAL 142
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
7-222 7.66e-70

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 214.08  E-value: 7.66e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   7 LPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKlPYLAYSWIENEKG----EKSDALLVALPPIQRLEPKA 82
Cdd:COG3121   10 LALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQdagpDKATAPFVVTPPLFRLEPGK 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  83 TSQVRVVKQASttQLPGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVElQLQVSQQGNQ 162
Cdd:COG3121   89 SQTVRIIRTGP--PLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAE-KLTWSLVGNG 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446064944 163 LTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFST----VNTNTGSYSGSQFYLGYMDDYGA 222
Cdd:COG3121  166 LTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTrrwpLPAGASLAAGGKVTWATINDYGG 229
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 10-236 1.32e-59

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 188.84  E-value: 1.32e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  10 MLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVALPPIQRLEPKATSQVRVV 89
Cdd:PRK15274  16 VLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQ 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  90 KQASTTQLPGDRETLFFYNMREIPPAPDKSSdhaILQVAIQSRIKLFWRPAALRKKAGEKVELQ--LQVSQQGNQLTLKN 167
Cdd:PRK15274  96 PLPAAASLPQDRESLFYFNVREIPPKSDKPN---TLQLALQTRIKFFYRPVAVARQVDKTHPWQtkLTLTYQGDGVIFDN 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446064944 168 PTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTN-TGSYSGSQFYLGYMDDYGALRMTTLNCSGQ-CRL 236
Cdd:PRK15274 173 PTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPiKGASLGSSPVVGYVDDYGGHRLLVFTCSGNtCKV 243
PRK15285 PRK15285
fimbrial chaperone StfD;
9-231 1.06e-54

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 176.12  E-value: 1.06e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   9 LMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVALPPIQRLEPKATSQVRV 88
Cdd:PRK15285  14 LLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPSAIGQVKI 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  89 VKQASTTQLPGDRETLFFYNMREIPPAPDKSSdhaILQVAIQSRIKLFWRPAALRK-KAGEKVELQLQVSQQGNQLTLKN 167
Cdd:PRK15285  94 QGMPALASLPQDRETLFYYNVREIPPQSDKPN---TLQIALQTRIKVFYRPQALSKiDMQHPWQYKITLQRQGNGYQVSN 170

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446064944 168 PTAYYLTIAYLGRNEKGV-LPGFKTVMVAPFSTVNT-NTGSYSGSQFYLGYMDDYGALRMTTLNCS 231
Cdd:PRK15285 171 PTGYYVVLSNASNRMDGTpARGFSPLVIAPKSNVTLgGDASELGHSPVLTYVNDYGARLPLIFNCT 236
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 20-230 7.95e-53

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 170.72  E-value: 7.95e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  20 AAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLvALPPIQRLEPKATSQVRVVK-QASTTQLP 98
Cdd:PRK15254  16 AAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALM-ALPPLQRIDAGQKSQVRITQvRGLTDKLP 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  99 GDRETLFFYNMREIPPapdKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYL 178
Cdd:PRK15254  95 QDRETLFWFNVRGVPP---KPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRNPTPYYITVAWL 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446064944 179 GRNEKGVLPGF-KTVMVAPFSTVNTNTGSYSGSQ-FYLGYMDDYGALRMTTLNC 230
Cdd:PRK15254 172 GADRSHRLSGFrEGVMVPPLGSLPLKAVLPAETRtLWVGYIDDYGGLQMNRYAC 225
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-142 1.67e-43

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 143.11  E-value: 1.67e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   22 VQPDRTRIVFNANDKATSLRIENQSDKlPYLAYSWIENEKG----EKSDALLVALPPIQRLEPKATSQVRVVKQASttQL 97
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEegtdEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGP--PL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446064944   98 PGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAAL 142
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
lfpB PRK15290
fimbrial chaperone;
3-223 4.15e-37

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 130.50  E-value: 4.15e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   3 FIKGLPLMLLTISLG----CNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIEN-EKGEKSDALLVALPPIQR 77
Cdd:PRK15290  16 SCKLFTAIILSVFLGqpalTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDPfNKEDKSKAPFTVIPPVSR 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  78 LEPKATSQVRVVKQASTtQLPGDRETLFFYNMREIPPAPdKSSDHAILQVAIQSRIKLFWRPAALR---KKAGEKVELQl 154
Cdd:PRK15290  96 LEPSQEKVLRIIHTKGV-SLPDDRESVFWLNIKNIPPSA-SNKATNSLEIAVKTRIKLFWRPASIRlipEDAAPKVKWR- 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446064944 155 qvsQQGNQLTLKNPTAYYLTIAYLGRNEKGVlpgfKTVMVAPFSTVNTN--TGSySGSQFYLGYMDDYGAL 223
Cdd:PRK15290 173 ---REGRNLIAENPNPIHISVMDVIVDGHDV----PLNMIRPFETLTLPlpANS-AGGQMTWRFINDYGAV 235
PRK09926 PRK09926
fimbrial chaperone;
27-221 8.02e-37

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 129.84  E-value: 8.02e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  27 TRIVFNANDKATSLRIENQSDKlPYLAYSWIE--NEKGEKSDALL--VALPPIQRLEPKATSQVRVVKQASTTqLPGDRE 102
Cdd:PRK09926  32 TRIIYKSDQKDVNVRLENKGNN-PLLVQSWLDtgDDNAEPGSIKVpfTATPPVSRIDPKRGQTIKLMYTASTA-LPKDRE 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944 103 TLFFYNMREIPPAPD--KSSDHAILQVAIQSRIKLFWRPAALRKKAGE---KVELQLQVSQQGNQLTLKNPTAYYLTIay 177
Cdd:PRK09926 110 SVFWFNVLEVPPKPDaeKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEaplALKWSWAGSEGKASLRVTNPTPYYVSF-- 187

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446064944 178 lgrNEKGVLPGFKTV-----MVAPFS----TVNTNTGSYSGSQFYLGYMDDYG 221
Cdd:PRK09926 188 ---SSGDLEAGGKRYpvdskMIAPFSdesmKVKGLSGKASSGKVHFYAINDFG 237
PRK15195 PRK15195
molecular chaperone FimC;
1-223 4.30e-36

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 127.28  E-value: 4.30e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   1 MTFIKGLPLMLLT--ISLGCNAA--VQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVAlPPIQ 76
Cdd:PRK15195   2 MTKIKLGMIIIFYliISASVHAAggIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVT-PPLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  77 RLEPKATSQVRVVKQASTtqLPGDRETLFFYNMREIPPApDKSS--DHAILQVAIQSRIKLFWRPAALRKKAGEKVElQL 154
Cdd:PRK15195  81 VSEPKSENTLRIIYAGPP--LAADRESLFWMNVKAIPSV-DKNAleGRNVLQLAILSRIKLFVRPINLQELPEEAPD-TL 156

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446064944 155 QVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVlpgfKTVMVAPfsTVNTNTGSYSGSQFYLGY--MDDYGAL 223
Cdd:PRK15195 157 KFSRSGNHLKVHNPSPYYVTLVNLQVGSQKL----GNAMIAP--KVNSQIPLPSGVQGKLKFqtVNDYGAV 221
PRK15211 PRK15211
fimbrial chaperone;
1-229 1.14e-34

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 123.78  E-value: 1.14e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   1 MTFIKGLP-LMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLpYLAYSWIENEKGEKSDALLVALPPIQRLE 79
Cdd:PRK15211   2 KMMKWGLVsLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQT-YGGQVWIDNTTQGSSTVYMVPAPPFFKVR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  80 PKATSQVRVVKQASTtqLPGDRETLFFYNMREIPPAPdKSSDHAILQVAIQSRIKLFWRPAALRKKAgEKVELQLQVSQQ 159
Cdd:PRK15211  81 PKEKQIIRIMKTDSA--LPKDRESLFWLNVQEIPPKP-KASEGNVLAVALNTQVKLIYRPKALKEGR-ENAEKNLQIIHR 156

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446064944 160 GNQLTLKNPTAYYLTIAYLGRNEKGVLPGFKT----VMVAPFSTVNTNTGSySGSQFYLGYMDDYGALRMTTLN 229
Cdd:PRK15211 157 GGETYLKNPTPYYFAVTGVKLNGQPVKLSDRVmneiAQLAPFSEVSLGKLS-LNGTVTVQAVNDWGGTQDYTLK 229
PRK15246 PRK15246
fimbrial assembly chaperone;
20-227 7.55e-32

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 116.60  E-value: 7.55e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  20 AAVQPDRTRIVFNANDKATSLRIENQSDKlPYLAYSWIE----NEKGEKSDALLVALPPIQRLEPKATSQVRVVkQASTT 95
Cdd:PRK15246  10 AAVNIDRTRIIFASDDVAQSLTLSNDNTT-PMLLQVWTDagniDASPDNSKTPLVALPPVFKMQPGELRTLRLL-LSSRQ 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  96 QLPGDRETLFFYNMREIPPAPDKSSDHA-ILQVAIQSRIKLFWRPAALrKKAGEKVELQLQVSQQGNQLTLKNPTAYYLT 174
Cdd:PRK15246  88 QLATDRESLFWLNIYQIPPVTQDIKNHPrKLVLPLRLRLKILIRPTGL-KAPTEAEEKKLRFIAKENTIRIVNPTSWYMS 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446064944 175 IAYLGRNEKGVlpgfKTVMVAPFS--TVNTNTGSYSGSQFYLGYMDDYGALRMTT 227
Cdd:PRK15246 167 LTLTMDNKKSI----GDIMVAPKTalDVPLTRSPTPGASINYAVINDSGNWRQYT 217
PRK15208 PRK15208
molecular chaperone LpfB;
9-222 8.20e-32

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 116.16  E-value: 8.20e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   9 LMLLTISLGCNAA-VQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVAlPPIQRLEPKATSQVR 87
Cdd:PRK15208   9 LALALIAQNSFAGgVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTPFIIT-PPLFKLDPTKNNVLR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  88 VVKqaSTTQLPGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVElQLQVSQQGNQLTLKN 167
Cdd:PRK15208  88 IVN--ITNTLPQDRESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWN-KLRFTRAGNQIKVEN 164

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446064944 168 PTAYYLTIAYLGRNEKGVLpgfKTVMVAPFSTVNTN--TGSYSGSQFYLGYMDDYGA 222
Cdd:PRK15208 165 PSAFNLTFNQFYANGRDIE---KAGMVPAKGSLNIElpAGTGKVSEVKYNIINDFGT 218
PRK15295 PRK15295
fimbrial assembly chaperone;
10-199 1.64e-31

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 115.43  E-value: 1.64e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  10 MLLTISLGcNAAVQPDRTRIVFNANDKATSLRIENQsDKLPYLAYSWIE--NEKGEKSDALLVAlPPIQRLEPKATSQVR 87
Cdd:PRK15295  10 VLLTSHVA-HASIVVGGTRLVFDGNNDESSINVENK-DSKANLVQSWLSvvDPQVTNKQAFIIT-PPLFRLDAGQKNSIR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  88 VVKqaSTTQLPGDRETLFFYNMREIPpAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKN 167
Cdd:PRK15295  87 VIR--SGAPLPADRESMYWLNIKGIP-SIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNN 163

                        170       180       190
                 ....*....|....*....|....*....|..
gi 446064944 168 PTAYYLTIAYLGRNEKGVLPGFktvMVAPFST 199
Cdd:PRK15295 164 PTPYYMNFASVTLNSHEVKSAT---FVPPKSS 192
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 6-222 8.70e-31

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 113.72  E-value: 8.70e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   6 GLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENqSDKLPYLAYSWIEN--EKGEKSDALLVALPPIQRLEPKAT 83
Cdd:PRK15299   8 GLLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISN-SDNVPYLIQSWAQSisETGASGDAPFMVTPPLFRLNGGQK 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  84 SQVRVVKQASttQLPGDRETLFFYNMREIPPA-PDksSDHAILQVAIQSRIKLFWRPAALRKKAgEKVELQLQVSQQGNQ 162
Cdd:PRK15299  87 NVLRIIRTGG--NLPEDRESLYWLDIKSIPSSnPD--NKHNTLMLAVKAEFKLIYRPKALTQKP-EEVADRLTWSRQGRT 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446064944 163 LTLKNPTAYYLTIAYLGRNEKGV-LPGFktvmVAPFSTVNTNTGSYSGSQFYLGYMDDYGA 222
Cdd:PRK15299 162 LTVKNPTPYYMNFATLSVGSQKVkAPRY----VAPFGNAQYTLPAAASGPIAWSIINDFGG 218
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 9-221 1.18e-28

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 108.60  E-value: 1.18e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   9 LMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPyLAYSWIENEKG----EKSDALLVALPPIQRLEPKATS 84
Cdd:PRK15253  22 VLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQAS-LVQSWIDDGNTslppEKIQVPFMLTPPVARVAAESGQ 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  85 QVRVVKQASTtqLPGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRP---AALRKKAGEKvelqLQVSQQGN 161
Cdd:PRK15253 101 QIKIKKMPNS--LPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPsriAAVTKDSFQR----IGLFRSNK 174

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944 162 QLTLKNPTAYYLTIAYLGRNEKGVlpGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYG 221
Cdd:PRK15253 175 TVIMKNDTANWITVTDVKAGNTKI--NDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNG 232
PRK15249 PRK15249
fimbrial chaperone;
27-199 7.93e-25

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 98.72  E-value: 7.93e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  27 TRIVFNANDKATSLRIENqSDKLPYLAYSWIEN----EKGEKSDAL-LVALPPIQRLEPKATSQVRVVKQASTTqLPGDR 101
Cdd:PRK15249  35 SRIIYPSTASSVDVQLKN-NDAIPYIVQTWFDDgdmnTSPENSSAMpFIATPPVFRIQPKAGQVVRVIYNNTKK-LPQDR 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944 102 ETLFFYNMREIPPAPDKS-SDHAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQV---SQQGNQLTLKNPTAYYLTIAY 177
Cdd:PRK15249 113 ESVFWFNVLQVPPTNIGSdSGQNKMLVMLRSRIKLFYRPDGLGKPDNLAKKLQIKTvnkGSGKSGIVIVNPQPWFASLSN 192

                        170       180
                 ....*....|....*....|..
gi 446064944 178 LGRNEKGVLPGFKTVMVAPFST 199
Cdd:PRK15249 193 LNVKVNGASYNLDADMIAPFSS 214
PRK15218 PRK15218
fimbrial assembly chaperone;
27-221 1.90e-24

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 96.97  E-value: 1.90e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  27 TRIVFNANDKATSLRIENQsDKLPYLAYSWIENEKG----EKSDALLVALPPIQRLEPKATSQVRVVKQASttQLPGDRE 102
Cdd:PRK15218  25 TRIIYPAQKKDITVQLMND-GKRSSLIQAWIDNGDTslppEKLQVPFIMTPPVIRVAANSGQQLKIKKLAN--NLPGDRE 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944 103 TLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALrKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNE 182
Cdd:PRK15218 102 SLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGV-QKVDKATFSRLQLLRAPGSISVKNNSANWITIPEIKAKS 180

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 446064944 183 KgvlPGFKTVMVAPFSTvNTNTGSYSGSQFYLGYMDDYG 221
Cdd:PRK15218 181 K---VNKETLLLAPWSS-QSITTTVVVNSYTVTLIDDSG 215
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 7-222 7.33e-22

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 90.21  E-value: 7.33e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   7 LPLMLLTISLGCNAAVQPD-----RTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVAlPPIQRLEPK 81
Cdd:PRK15188   9 LRLLLLLSAAGLSFAAQAGgialgATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIIT-PPLFVIQPK 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  82 ATSQVRVVKQASTtqLPGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALrKKAGEKVELQLQVSQQGN 161
Cdd:PRK15188  88 KENILRIMYVGPS--LPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNL-AEAPAHAPSTLRCRNERG 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446064944 162 QLTLKNPTAYYLTIAYLGRNEKGvLPgfkTVMVAPFSTVntnTGSYSGSQFYLGYMDDYGA 222
Cdd:PRK15188 165 QLTITNPSPYYVSMVELYSAGKK-LP---NTMVPPKGAI---TLPATPGQVSLRTVNDFGA 218
PRK15224 PRK15224
pili assembly chaperone PapD;
21-176 6.35e-17

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 77.09  E-value: 6.35e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  21 AVQPDRTRIVFNANDKATSLRIENQSDkLPYLAYSWIENEKgEKSDALLVALPPIQRLEPKATSQVRVVKQASttQLPGD 100
Cdd:PRK15224  29 SVKLGATRVIYHAGTAGATLSVSNPQN-YPILVQSSVKAAD-KSSPAPFLVMPPLFRLEANQQSQLRIVRTGG--DMPTD 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944 101 RETLFFYNMREIPPAPDKSSDHAI-----LQVAIQSRIKLFWRPAALrKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTI 175
Cdd:PRK15224 105 RETLQWVCIKAVPPENEPSDTQAKgatldLNLSINVCDKLIFRPDAV-KGTPEDVAGNLRWVETGNKLKVENPTPFYMNL 183


                 .
gi 446064944 176 A 176
Cdd:PRK15224 184 A 184
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 7-171 2.41e-15

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 72.38  E-value: 2.41e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944   7 LPLMLLTISLGCNAA-VQPDRTRIVFNANDKATSLRIENqSDKLPYLAYSWIENEKGEKSDALLVAlPPIQRLEPKATSQ 85
Cdd:PRK09918  10 TALVLLSSSSAVHAAgMVPETSVVIVEESDGEGSINVKN-TDSNPILLYTTLVDLPEDKSKLLLVT-PPVARVEPGQSQQ 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  86 VRVVKQASTtqlPGDRETLFFYNMREIPPAPDKSSDhaiLQVAIQSRIKLFWRPAAL-RKKAGEKVelqLQVSQQGNQLT 164
Cdd:PRK09918  88 VRFILKSGS---PLNTEHLLRVSFEGVPPKPGGKNK---VVMPIRQDLPVLIQPAALpVVRDPWKL---LVWSISGNNLV 158


                 ....*..
gi 446064944 165 LKNPTAY 171
Cdd:PRK09918 159 VSNPSPY 165
PRK11385 PRK11385
fimbrial chaperone;
27-187 2.81e-15

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 72.47  E-value: 2.81e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  27 TRIVFNANDKATSLRIENQSDKlpylaySWIENEK---------GEKSD--ALLVALPPIQRLEPKATSQVRVVKQASTT 95
Cdd:PRK11385  33 TRFIFPADRESISILLTNTSQE------SWLINSKinrptrwagGEASTvpAPLLAAPPLILLKPGTTGTLRLLRTESDI 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  96 qLPGDRETLFFYNMREIPPApdkSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVElQLQVSQQGNQLTLKNPTAYYLTI 175
Cdd:PRK11385 107 -LPVDRETLFELSIASVPSG---KVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQ-QLRWTRNSQGVQLTNPTPYYINL 181

                        170
                 ....*....|....*..
gi 446064944 176 AYLGRNEK-----GVLP 187
Cdd:PRK11385 182 IQVSVNGKalsnaGVVP 198
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 165-224 5.66e-14

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 64.59  E-value: 5.66e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446064944  165 LKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFST--VNTNTGSYSGSQFYLGYMDDYGALR 224
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSqtFAGLPAPAAGGTVSYTYINDYGGIV 62
PRK15233 PRK15233
fimbrial chaperone SefB;
27-222 1.86e-13

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 67.83  E-value: 1.86e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  27 TRIVFNANDKATSLRIENQSDkLPYLAYSWIENEKgEKSDALLVALPPIQRLEPKATSQVRVVkqASTTQLPGDRETLFF 106
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKE-YPILVQTQVYNDD-KSSKAPFIVTPPILKVESNARTRLKVI--PTSNLFNKNEESLYW 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944 107 YNMREIPPAPDKSSDHAI-------LQVAIQSRIKLFWRPAALRKKAGEKVElQLQVSQQGNQLTLKNPTAYYLTIAYL- 178
Cdd:PRK15233 123 LCVKGVPPLNDNESNNKNnittnlnVNVVTNSCIKLIYRPKTIDLTTMEIAD-KLKLERKGNSIVIKNPTSSYVNIANIk 201

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 446064944 179 -GRNEKGVLPGFktvmVAPFSTVNTNTGSYsgSQFYLGYMDDYGA 222
Cdd:PRK15233 202 sGNLSFNIPNGY----IEPFGYAQLPGGVH--SKITLTILDDNGA 240
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
27-203 2.95e-12

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 63.95  E-value: 2.95e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  27 TRIVFNANDKATSLRIENQSDKlpylaySWI-----------ENEKGEKSDALLVALPPIQRLEPKATSQVRVVKQASTt 95
Cdd:PRK15192  29 TRFIYHAGAPALSVPVSNHSEA------SWLidthilpggrwPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTGAP- 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446064944  96 qLPGDRETLFFYNMREIPPAPDKSSDhaiLQVAIQSRIKLFWRPAALrkkAGEKVEL--QLQVSQQGNQLTLKNPTAYYL 173
Cdd:PRK15192 102 -LPADRESLFTLSIAAIPSGKPEANR---VQMAFRSALKLLYRPEGL---AGNPQQAyrHLIWSLTPDGATVRNPTPYYV 174

                        170       180       190
                 ....*....|....*....|....*....|
gi 446064944 174 TIAYLGRNEKGvlpGFKTVMVAPFSTVNTN 203
Cdd:PRK15192 175 TLFLLRANERA---QDNAGVVAPFATRQTD 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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