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Conserved domains on  [gi|446000578|ref|WP_000078433|]
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MULTISPECIES: MFS transporter [Enterobacteriaceae]

Protein Classification

MFS transporter( domain architecture ID 1000035)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0115 super family cl36764
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
17-422 7.87e-26

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


The actual alignment was detected with superfamily member TIGR00895:

Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 108.98  E-value: 7.87e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   17 DVIDIVNKNSAINTSIGVIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFG 96
Cdd:TIGR00895   1 DVQNNIRKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   97 QKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTvvy 176
Cdd:TIGR00895  81 RRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEY--APKRFRGTAVGLMFCGYPIGAA--- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  177 lvlLPLLLSGIAEEQL-WRYGIFIGAIFAVIFMILRYFFIGESAMWAARVGRYQeacdILGKRYGVQARVAASGTTEAKF 255
Cdd:TIGR00895 156 ---VGGFLAGWLIPVFgWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPET----VRRIVNAIAPQMQAEAQSALPE 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  256 SEKAENKYSGGYGILFNDRYRKRTILGCVVATMQAWQYNAVGVYLPLTLAGiISGGLTGALTGSAVVNalcgvTGGMIGS 335
Cdd:TIGR00895 229 QKSTQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFN-----FGGVIGS 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  336 FILQRLGTR--RQSMYGFAVVTLALLSLGALATTNPWLSLgLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARA 413
Cdd:TIGR00895 303 IIFGWLADRlgPRVTALLLLLGAVFAVLVGSTLFSPTLLL-LLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIG 381

                  ....*....
gi 446000578  414 IMRTGAIAG 422
Cdd:TIGR00895 382 IGRLGAIIG 390
 
Name Accession Description Interval E-value
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
17-422 7.87e-26

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 108.98  E-value: 7.87e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   17 DVIDIVNKNSAINTSIGVIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFG 96
Cdd:TIGR00895   1 DVQNNIRKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   97 QKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTvvy 176
Cdd:TIGR00895  81 RRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEY--APKRFRGTAVGLMFCGYPIGAA--- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  177 lvlLPLLLSGIAEEQL-WRYGIFIGAIFAVIFMILRYFFIGESAMWAARVGRYQeacdILGKRYGVQARVAASGTTEAKF 255
Cdd:TIGR00895 156 ---VGGFLAGWLIPVFgWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPET----VRRIVNAIAPQMQAEAQSALPE 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  256 SEKAENKYSGGYGILFNDRYRKRTILGCVVATMQAWQYNAVGVYLPLTLAGiISGGLTGALTGSAVVNalcgvTGGMIGS 335
Cdd:TIGR00895 229 QKSTQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFN-----FGGVIGS 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  336 FILQRLGTR--RQSMYGFAVVTLALLSLGALATTNPWLSLgLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARA 413
Cdd:TIGR00895 303 IIFGWLADRlgPRVTALLLLLGAVFAVLVGSTLFSPTLLL-LLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIG 381

                  ....*....
gi 446000578  414 IMRTGAIAG 422
Cdd:TIGR00895 382 IGRLGAIIG 390
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
35-454 3.77e-22

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 97.29  E-value: 3.77e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGNKYIAAQF--GISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGA 112
Cdd:cd17316    1 LLLAGLGWFFDAYDFFLIGFVAPVLAAEFslGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 113 AAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTVVYLVLLPLLLSGIAEEqL 192
Cdd:cd17316   81 LLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEF--APSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGDW-G 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 193 WRYGIFIGAIFAVIFMILRYFFIGESAMWAarvgryqeacdilgkrygvqarvaasgtteakfsekaenkysggygilfn 272
Cdd:cd17316  158 WRILFLIGALPALLALLLRRRTLLLILLWF-------------------------------------------------- 187
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 273 dryrkrtilgCVVATmqawqYNAVGVYLPlTLAGIISGGLTGALTGSAVVNALCGVTGGMIGSFILQRLGTRRQSMYGFA 352
Cdd:cd17316  188 ----------FISFG-----YYGLTTFLP-TYLQTVLGLSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLI 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 353 VVTLALLSLGALATTNPWLsLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAG-LIFWPMLWG 431
Cdd:cd17316  252 LSGILALPLFYLLSGSPTL-LLLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLGRLGGGGApPLIALLLAS 330
                        410       420
                 ....*....|....*....|...
gi 446000578 432 ALKTEAFYWLAIVPFLGFLTCVL 454
Cdd:cd17316  331 TGGTGVPALILALLAIVALIVAL 353
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
25-419 3.76e-20

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 91.57  E-value: 3.76e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  25 NSAINTSIGVIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIG 104
Cdd:COG2814    2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 105 MGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTVVYLVLLPlll 184
Cdd:COG2814   82 LLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADL--VPPERRGRALGLLGAGLGLGPALGPLLGGL--- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 185 sgIAEEQLWRYGIFIGAIFAVIFMILRYFFIGESAmwaarvgryqeacdilgkrygvqarvaasgtteakfsEKAENKYS 264
Cdd:COG2814  157 --LADLFGWRWVFLVNAVLALLALLLLLRLLPESR-------------------------------------PAARARLR 197
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 265 GGYGILFNDRyrkRTILGCVVATMQAWQYNAVGVYLPLTLAGIIsgGLTGALTGSA-VVNALCGVTGGMIGSFILQRLGT 343
Cdd:COG2814  198 GSLRELLRRP---RLLLLLLLAFLLGFGFFALFTYLPLYLQEVL--GLSASAAGLLlALFGLGGVLGALLAGRLADRFGR 272
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446000578 344 RRQSMYGFAVVTlalLSLGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGA 419
Cdd:COG2814  273 RRLLLIGLLLLA---LGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
Sugar_tr pfam00083
Sugar (and other) transporter;
75-441 1.23e-18

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 88.10  E-value: 1.23e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   75 ASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA--AVAIAPSIWWVL-VCRVIMGFGLGIDFPLATNAVAELrg 151
Cdd:pfam00083  53 SIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVlqGAAKGKWSVYQLiVGRVLVGIGVGGASVLAPMYISEI-- 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  152 STSKKTGTSVNLWQMAWyvSTTVVYLVLLPLLLSGIAEEQLWRYGIFIGAIFAVIFMILRyFFIGESAMWAARVGRYQEA 231
Cdd:pfam00083 131 APKKLRGALGSLYQLAI--TFGILLAYIFGLGLNKTSNSDGWRIPLGLQLVPALLLIIGL-LFLPESPRWLVEKGRLEEA 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  232 CDILGKRYGVQArVAASGTTEAKFSEKAENKYSGGYGILFNDR-YRKRTILGCVVATMQAWQYNAVGVYLPLTLAGiiSG 310
Cdd:pfam00083 208 REVLAKLRGVPD-VDRELDEIKDSLEAGQEAEKASWKELFSTKtRRQRLLIGVMLQIFQQLTGINAIFYYSTTIFE--NL 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  311 GLTGALTGSAVVNALcGVTGGMIGSFILQRLGTRRQSMYGFAVV----TLALLSLGALATTNPWLSLGLLGSI---IFFH 383
Cdd:pfam00083 285 GLSDSFLVTIIVGVV-NFVFTFIAIFLVDRFGRRPLLLLGAAGMaicfVILGIVALLGVSKSDWAGIVAIVFIalfIAFF 363
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 446000578  384 SAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAGLIFWPMLWGALKTEAFYWL 441
Cdd:pfam00083 364 AMGWGPVPWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIITDAIGLGYTFFI 421
PRK03893 PRK03893
putative sialic acid transporter; Provisional
36-135 3.04e-07

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 52.78  E-value: 3.04e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  36 FIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAV 115
Cdd:PRK03893  23 SAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLAC 102
                         90       100
                 ....*....|....*....|
gi 446000578 116 AIAPSIWWVLVCRVIMGFGL 135
Cdd:PRK03893 103 GFAPGYWTLFIARLVIGMGM 122
 
Name Accession Description Interval E-value
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
17-422 7.87e-26

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 108.98  E-value: 7.87e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   17 DVIDIVNKNSAINTSIGVIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFG 96
Cdd:TIGR00895   1 DVQNNIRKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   97 QKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTvvy 176
Cdd:TIGR00895  81 RRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEY--APKRFRGTAVGLMFCGYPIGAA--- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  177 lvlLPLLLSGIAEEQL-WRYGIFIGAIFAVIFMILRYFFIGESAMWAARVGRYQeacdILGKRYGVQARVAASGTTEAKF 255
Cdd:TIGR00895 156 ---VGGFLAGWLIPVFgWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPET----VRRIVNAIAPQMQAEAQSALPE 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  256 SEKAENKYSGGYGILFNDRYRKRTILGCVVATMQAWQYNAVGVYLPLTLAGiISGGLTGALTGSAVVNalcgvTGGMIGS 335
Cdd:TIGR00895 229 QKSTQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFN-----FGGVIGS 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  336 FILQRLGTR--RQSMYGFAVVTLALLSLGALATTNPWLSLgLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARA 413
Cdd:TIGR00895 303 IIFGWLADRlgPRVTALLLLLGAVFAVLVGSTLFSPTLLL-LLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIG 381

                  ....*....
gi 446000578  414 IMRTGAIAG 422
Cdd:TIGR00895 382 IGRLGAIIG 390
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
35-454 3.77e-22

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 97.29  E-value: 3.77e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGNKYIAAQF--GISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGA 112
Cdd:cd17316    1 LLLAGLGWFFDAYDFFLIGFVAPVLAAEFslGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 113 AAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTVVYLVLLPLLLSGIAEEqL 192
Cdd:cd17316   81 LLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEF--APSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGDW-G 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 193 WRYGIFIGAIFAVIFMILRYFFIGESAMWAarvgryqeacdilgkrygvqarvaasgtteakfsekaenkysggygilfn 272
Cdd:cd17316  158 WRILFLIGALPALLALLLRRRTLLLILLWF-------------------------------------------------- 187
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 273 dryrkrtilgCVVATmqawqYNAVGVYLPlTLAGIISGGLTGALTGSAVVNALCGVTGGMIGSFILQRLGTRRQSMYGFA 352
Cdd:cd17316  188 ----------FISFG-----YYGLTTFLP-TYLQTVLGLSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLI 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 353 VVTLALLSLGALATTNPWLsLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAG-LIFWPMLWG 431
Cdd:cd17316  252 LSGILALPLFYLLSGSPTL-LLLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLGRLGGGGApPLIALLLAS 330
                        410       420
                 ....*....|....*....|...
gi 446000578 432 ALKTEAFYWLAIVPFLGFLTCVL 454
Cdd:cd17316  331 TGGTGVPALILALLAIVALIVAL 353
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
25-419 3.76e-20

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 91.57  E-value: 3.76e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  25 NSAINTSIGVIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIG 104
Cdd:COG2814    2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 105 MGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTVVYLVLLPlll 184
Cdd:COG2814   82 LLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADL--VPPERRGRALGLLGAGLGLGPALGPLLGGL--- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 185 sgIAEEQLWRYGIFIGAIFAVIFMILRYFFIGESAmwaarvgryqeacdilgkrygvqarvaasgtteakfsEKAENKYS 264
Cdd:COG2814  157 --LADLFGWRWVFLVNAVLALLALLLLLRLLPESR-------------------------------------PAARARLR 197
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 265 GGYGILFNDRyrkRTILGCVVATMQAWQYNAVGVYLPLTLAGIIsgGLTGALTGSA-VVNALCGVTGGMIGSFILQRLGT 343
Cdd:COG2814  198 GSLRELLRRP---RLLLLLLLAFLLGFGFFALFTYLPLYLQEVL--GLSASAAGLLlALFGLGGVLGALLAGRLADRFGR 272
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446000578 344 RRQSMYGFAVVTlalLSLGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGA 419
Cdd:COG2814  273 RRLLLIGLLLLA---LGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
36-455 4.14e-20

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 91.98  E-value: 4.14e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  36 FIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAV 115
Cdd:cd17371    2 WAAFLGWALDGFDLLLLGLVLPALIAEFGLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLC 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 116 AIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGStsKKTGTSVNLWQMAWYVSTtVVYLVLLPLLLSGIAEEQLWRY 195
Cdd:cd17371   82 GFAQNYWQLLILRALAGLGFGGEWAAGAALMAEYVPA--RHRGKALGYVQSGWAVGW-LLATLLAALLFPLLPPEIAWRV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 196 GIFIGAIFAVIFMILRyFFIGESAMWaarvgryqeacdilgkrygvQARVAASGTTEAKFSEkaenkysggyGILFNDRY 275
Cdd:cd17371  159 LFLLGALPALLVLFIR-RFVKEPPQW--------------------QAARAARRHFADRPSL----------RELFSPPL 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 276 RKRTILGCVVATMQAWQYNAVGVYLPLTLA---GIISGGLTGALTGSAVVnalcGVTGGMIGSFILQRLGtRRQSMYGFA 352
Cdd:cd17371  208 LRTTLLASLLATGALGGYYGITTWLPSYLTgerGLSFEGSAGYLVVTILG----GFLGYLAGGFLADRIG-RRNNFALFA 282
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 353 VVTLALLSLGALATTNPWLSLGLLGSIIFFHSAGPGGLGmTIATLSYPPAIRPTGVGFARAIMRTGAIAGlifwPMLWGA 432
Cdd:cd17371  283 LGSAISILLYFFLPLSPTLILILGFPLGFFASGPFSGMG-AYLTELFPTAVRATAQGFCYNVGRIIGALF----PFLVGF 357
                        410       420
                 ....*....|....*....|....*...
gi 446000578 433 LKTE-----AFYWLAIVPFLGFLTCVLI 455
Cdd:cd17371  358 LATSgslgtAIAVFAAVYYIAGLVLALL 385
Sugar_tr pfam00083
Sugar (and other) transporter;
75-441 1.23e-18

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 88.10  E-value: 1.23e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   75 ASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA--AVAIAPSIWWVL-VCRVIMGFGLGIDFPLATNAVAELrg 151
Cdd:pfam00083  53 SIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVlqGAAKGKWSVYQLiVGRVLVGIGVGGASVLAPMYISEI-- 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  152 STSKKTGTSVNLWQMAWyvSTTVVYLVLLPLLLSGIAEEQLWRYGIFIGAIFAVIFMILRyFFIGESAMWAARVGRYQEA 231
Cdd:pfam00083 131 APKKLRGALGSLYQLAI--TFGILLAYIFGLGLNKTSNSDGWRIPLGLQLVPALLLIIGL-LFLPESPRWLVEKGRLEEA 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  232 CDILGKRYGVQArVAASGTTEAKFSEKAENKYSGGYGILFNDR-YRKRTILGCVVATMQAWQYNAVGVYLPLTLAGiiSG 310
Cdd:pfam00083 208 REVLAKLRGVPD-VDRELDEIKDSLEAGQEAEKASWKELFSTKtRRQRLLIGVMLQIFQQLTGINAIFYYSTTIFE--NL 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  311 GLTGALTGSAVVNALcGVTGGMIGSFILQRLGTRRQSMYGFAVV----TLALLSLGALATTNPWLSLGLLGSI---IFFH 383
Cdd:pfam00083 285 GLSDSFLVTIIVGVV-NFVFTFIAIFLVDRFGRRPLLLLGAAGMaicfVILGIVALLGVSKSDWAGIVAIVFIalfIAFF 363
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 446000578  384 SAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAGLIFWPMLWGALKTEAFYWL 441
Cdd:pfam00083 364 AMGWGPVPWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIITDAIGLGYTFFI 421
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
34-458 3.74e-18

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 85.69  E-value: 3.74e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  34 VIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:COG2271   11 ILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 114 AVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTtvvylVLLPLLLSGIAEEQLW 193
Cdd:COG2271   91 LFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEW--FPPKERGRALGIFNAGGPLGG-----ALAPPLLGWLLAAFGW 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 194 RYGIFIGAIFAVIFMILryffigesamwaarvgryqeacdilgkrygvqarvaasgtteakfsekaenkysggygilfnd 273
Cdd:COG2271  164 RAAFLILGLPGLLLALL--------------------------------------------------------------- 180
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 274 ryrkRTILGCVVATMQAWQYNAVGVYLPLTLAGIISGGLTGALTGSAVVnALCGVTGGMIGSFILQRLGTRRQSMYGFAV 353
Cdd:COG2271  181 ----RFWLLALAYFLVYFALYGFLTWLPTYLVEVRGLSLAQAGLLLSLP-FLAGIVGSLLGGWLSDRLGRRRKLVLAIGL 255
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 354 VTLALLSLGALATTNPWLSLGLLGSIIFFHSaGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAGlifwPMLWGAL 433
Cdd:COG2271  256 LLAALALLLLALLPSPALAIALLFLAGFGLG-GAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALG----PLLVGYL 330
                        410       420       430
                 ....*....|....*....|....*....|
gi 446000578 434 K-----TEAFYWLAIVPFLGFLTCVLINWE 458
Cdd:COG2271  331 LdatgyQAAFLLLAALALLAALLALLLLRE 360
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
75-457 1.16e-16

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 82.00  E-value: 1.16e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   75 ASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGA---AAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrg 151
Cdd:TIGR00879  78 SIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAilmGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEI-- 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  152 STSKKTGTSVNLWQMAWyvsTTVVYLVLLPLLLSGIAE-EQLWRYGIFIGAIFAVIFMILrYFFIGESAMWAARVGRYQE 230
Cdd:TIGR00879 156 APKALRGALTSLYQLAI---TFGILVAYGFGSGKVSLNnTLGWRIPLGLQLIPAGLLFLG-LFFLPESPRWLVGKGRVEE 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  231 ACDILGKRYGV----QARVAASGTTEAKFSEKAENKYSGGYGI--LFNDRYRKRTILGCVVATMQAWQYNAVGVYLPLTL 304
Cdd:TIGR00879 232 ARKSLARLRGTsgedKELLDELELIDIKRSIEKRSVQPSWGSLfsSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  305 AGIISGGLTgALTGSAVVNALcGVTGGMIGSFILQRLGTRRQSMYGFAVV--------TLALLSLGALATTNPWLSLGLL 376
Cdd:TIGR00879 312 ENAGVSTDH-AFLVSIIVGAV-NFAFTFVAIFLVDRFGRRPLLLIGAAGMaiclfvlgILGASFVTGSSKSSGNVAIVFI 389
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  377 GSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAGLIFWPMLWGALKTEAFYWlaIVPFLGFLTCVLIN 456
Cdd:TIGR00879 390 LLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFI--FFGGLNVLGLIFVY 467

                  .
gi 446000578  457 W 457
Cdd:TIGR00879 468 F 468
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
73-428 9.16e-15

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 76.15  E-value: 9.16e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  73 VNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA---AVAIAPSIWWVLVCRVIMgfglGIDFPLATNAV--- 146
Cdd:cd17357   54 IVSIFFIGGAIGSFISAFLANRFGRKNGLLISNALLVVSSLlmfLSKSAKSPELLIFGRFLV----GIACGLSTGFVpmy 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 147 ------AELRGSTSKKTGTSVNLwqmawyvsttVVYLVLLPLLLSGIAEEQLWRYGIFIGAIFAVIFMILRYFFiGESAM 220
Cdd:cd17357  130 lqeispSELRGALGSLTQIGVTL----------GILLGQVFGLPSVLGTETLWPYLLFFPGIPALLQLAALPFF-PESPK 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 221 WAARV-GRYQEACDILGKRYGVQARVAASgTTEAKFSEKAENKYSGG--YGILFNDRYRKRTILGCVVATMQA----WQY 293
Cdd:cd17357  199 FLLISkGDEEEAEKSLKFLRGIEDDVDQE-LEEIKKESEQMGDQKQVslMQLLRDPSLRLPLLLVLVVSASQQfsgiNAI 277
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 294 NAVGVYLpLTLAGIISGGLTGALTGSAVVNalcgVTGGMIGSFILQRLGTRRQSMYGFAVVTLAL---LSLGALATTNPW 370
Cdd:cd17357  278 FFYSTFI-FENAGFSPQLAEWANLGIGIVN----VLSTIVGPFLIEKVGRRPLLLISLSVCAVALllmSVFLFLSEQNSW 352
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446000578 371 LSLGLLGSI---IFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGA-IAGLIFWPM 428
Cdd:cd17357  353 MSYGCIVAIflfIFFFAIGLGPIPWFIGAELFPQAPRSAAQSLGSSVNWTSNfIVGMAFPPL 414
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
31-214 1.03e-14

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 74.46  E-value: 1.03e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  31 SIGVIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTI 110
Cdd:COG0477   12 RRRALLALALGTFLEGLDFTIVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 111 GAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTvvylvLLPLLLSGIAEE 190
Cdd:COG0477   92 ASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAEL--FPARERGRALGLWGAAIGLGLA-----LGPLLGGLLVAA 164
                        170       180
                 ....*....|....*....|....
gi 446000578 191 QLWRYGIFIGAIFAVIFMILRYFF 214
Cdd:COG0477  165 LGWRWIFLINAPLGLLALVLRLRL 188
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
75-450 1.71e-14

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 75.30  E-value: 1.71e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  75 ASVL-IAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDF---P--LATNAVAE 148
Cdd:cd17358   47 GSLLtLGALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASvvvPvyIAEIAPKN 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 149 LRGSTSKKTGTSVNLWQMAWYVSTTVVYlvllplllsgiaeeqlWRYGIFIGAIFAVIFMILrYFFIGESAMWAARVGRY 228
Cdd:cd17358  127 VRGALGSLNQLLVNIGILLGYVLGSFLP----------------WRTLALIGAIPPVVFLIL-LFFIPESPRWLAKKGRE 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 229 QEACDIL----GKRYGVQarVAASGTTEAKFSEKAENKySGGYGILFNDRYRKRTILGCVVATMQAWQ-YNAVGVY---- 299
Cdd:cd17358  190 EEAEKSLqflrGKDADIS--KEAAEIQEELAELEKEAK-ESSFSDLFQRKYLKPLVIGLGLMLFQQLSgINAVIFYassi 266
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 300 -------LPLTLAGIISGgltgaltgsaVVNalcgVTGGMIGSFILQRLGTRRQ---SMYGFAVVTLAL------LSLGA 363
Cdd:cd17358  267 fdeagsgLDPNTATIIIG----------VVQ----VVGTLVATLLVDRLGRRPLllvSAIGMGIGLLALglyfylQEHGA 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 364 LATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAGLIFWPMLWGALKTEAFYWL-A 442
Cdd:cd17358  333 LLSSVSWLPLVGLVIYIISFSIGLGPLPWVIMSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTFPFLTLAWGASGTFWIfA 412

                 ....*...
gi 446000578 443 IVPFLGFL 450
Cdd:cd17358  413 GICGLALV 420
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
73-420 8.82e-14

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 73.51  E-value: 8.82e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   73 VNASVLIAALIGGLLANRvinrFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGs 152
Cdd:TIGR00898 136 FFVGVLLGSFVFGYLSDR----FGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLP- 210
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  153 tSKKTGTSVNLWQMAWYVSTtvvylvllpLLLSGIAEE-QLWRYGIFIGAIFAVIFMILrYFFIGESAMWAARVGRYQEA 231
Cdd:TIGR00898 211 -KKQRAIVGTLIQVFFSLGL---------VLLPLVAYFiPDWRWLQLAVSLPTFLFFLL-SWFVPESPRWLISQGRIEEA 279
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  232 CDILgKRYGVQARVAASGTTEAKFSEKAENKYSGGYGILfnDRYRKRTILGCVVATMQAWQYNAVGVY-LPLTLagiisG 310
Cdd:TIGR00898 280 LKIL-QRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFL--DLFRTPNLRKTTLCLMMLWFTTAFSYYgLVLDL-----G 351
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  311 GLTGALTGSAVVNALCGVTGGMIGSFILQRLGTRRQSMYGFAVVTLALLSLGALATTNPWLSLGLLGSIIFFHSAGPGGL 390
Cdd:TIGR00898 352 NLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMV 431
                         330       340       350
                  ....*....|....*....|....*....|
gi 446000578  391 GMTIATLsYPPAIRPTGVGFARAIMRTGAI 420
Cdd:TIGR00898 432 YLYTAEL-YPTVVRNLGVGVCSTMARVGSI 460
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
38-454 2.17e-12

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 68.22  E-value: 2.17e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  38 ALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAI 117
Cdd:cd06174    1 LLLGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 118 APSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgsTSKKTGTSVNLWQMAWYVSTTVVYLVLLPLLLSGIaeEQLWRYGI 197
Cdd:cd06174   81 APSFWLLLLGRFLLGLGSGLIDPAVLALIADL---FPERERGRALGLLQAFGSVGGILGPLLGGILASSL--GFGWRAVF 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 198 FIGAIFAVIFMILRYFFIgesamwaarvgryqeacdilgkrygvqARVAASGTTEAKFSEKAENKysggyGILFNDRYRK 277
Cdd:cd06174  156 LIAAALALLAAILLLLVV---------------------------PDPPESARAKNEEASSKSVL-----KLLKRVLKNP 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 278 RTILGCVVATMQAWQYNAVGVYLPLTLagIISGGLTGALTGSA-VVNALCGVTGGMIGSFILQRLGTRRQSMYGFAVVTL 356
Cdd:cd06174  204 GLWLLLLAIFLVNLAYYSFSTLLPLFL--LDLGGLSVAVAGLLlSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMA 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 357 ALLSLGALATTNPWlsLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTG-AIAGLIFWPMLWGALKT 435
Cdd:cd06174  282 LGLALLLLAPSLLL--LLLLLLLLGFGLGGLLPLSFALIAELFPPEIRGTAFGLLNTFGFLGgAIGPLLAGFLLAATFGL 359
                        410
                 ....*....|....*....
gi 446000578 436 EAFYWLAIVPFLGFLTCVL 454
Cdd:cd06174  360 TGAFLVLAVLLLLAAILLL 378
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
36-213 4.13e-12

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 67.60  E-value: 4.13e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  36 FIALGGILIdAYQAAMVGFGNKYIAAQFGI--SPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:cd17315    1 VAALGGLLF-GYDLGVINGALLYIAKDLGFglSTSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGAL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 114 AVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAwyvSTTVVYLVLLPLLLSGIAEEQLW 193
Cdd:cd17315   80 LSALAPNVWVLIVGRFLLGLGVGLASVLVPLYISEI--APAKIRGALGTLNQLM---ITFGILLAYLLGLALSLSPPGWW 154
                        170       180
                 ....*....|....*....|
gi 446000578 194 RYGIFIGAIFAVIFMILRYF 213
Cdd:cd17315  155 RLMFALAAVPALLQLLLMFF 174
MFS_1 pfam07690
Major Facilitator Superfamily;
37-422 4.96e-12

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 67.06  E-value: 4.96e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   37 IALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVA 116
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  117 IAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTvvylvLLPLLLSGIAEEQLWRYG 196
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGAGALFPAALALIADW--FPPEERGRALGLVSAGFGLGAA-----LGPLLGGLLASLFGWRAA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  197 IFIGAIFAVIFMILRYFFIGESAMWAarvgryqeacdilgkrygvqarvaasgtteAKFSEKAENKYSGGYGILFNDRYR 276
Cdd:pfam07690 154 FLILAILSLLAAVLLLLPRPPPESKR------------------------------PKPAEEARLSLIVAWKALLRDPVL 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  277 KRTILGCVVATMqawqYNAVGVYLPLTLAGIisgGLTGALTGSAV-VNALCGVTGGMIGSFILQRLGTRRQSMYGFAVVT 355
Cdd:pfam07690 204 WLLLALLLFGFA----FFGLLTYLPLYQEVL---GLSALLAGLLLgLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLI 276
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446000578  356 LALLSLGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAG 422
Cdd:pfam07690 277 LAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALG 343
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
35-450 6.14e-12

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 67.21  E-value: 6.14e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIdAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAA 114
Cdd:cd17359    4 LVAALGGLLF-GYDTGVINGALPFLQTDFNLTPFLEGLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALG 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 115 VAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTVVYL---VLLPLLLSGIAEEQ 191
Cdd:cd17359   83 SAFSPNFTIFIIARIIGGLAVGGASALVPMYIAEV--APAEIRGRLVSLNQLMIVFGQLLAYIvnyLIANAGGADWLGAE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 192 LWRYGIFIGAIFAVIFMILrYFFIGESAMWAARVGRYqeacdILgkrygvqarvaasgtteakfsekaenkysggygilf 271
Cdd:cd17359  161 GWRWMLGLEAIPAILFLLG-MLFIPESPRWLVSKGKP-----IL------------------------------------ 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 272 ndryrkrtILGCVVATMQAWQ-YNAVGVYLPLTLAGiiSGGLTGALTGSAVVNALCGVTGGMIGSFILQRLGTRRQSMYG 350
Cdd:cd17359  199 --------IIGIGLAIFQQFVgINVIFYYGPEIFQN--AGFSENAALLQTIGIGVVNVIFTIIAILLVDKVGRKPLLLIG 268
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 351 ------FAVVTLALLSLGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAGLI 424
Cdd:cd17359  269 sigmaiSLLLIGTAFYFAPGSQASGIVALVLILLFVAFFAMSWGPVTWVLLSEIFPNRIRGLAMGIAVFFLWIANFLVSL 348
                        410       420
                 ....*....|....*....|....*..
gi 446000578 425 FWPMLWGALKTEAFYWL-AIVPFLGFL 450
Cdd:cd17359  349 TFPILLAAFGLAFTFLIfAVICVLAFL 375
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
59-455 2.27e-11

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 65.28  E-value: 2.27e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  59 IAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID 138
Cdd:COG2807   44 IRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGAGIAVG 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 139 FPLATNAVAElrgSTSKKTGTSVNLWQMAWYVSTTVVYLVLLPlllsgIAEEQLWRYGIFIGAIFAVIFMILryffiges 218
Cdd:COG2807  124 NVLLPGLIKR---WFPDRVGLMTGLYTAAMGLGAALAAGLTVP-----LAAALGWRGALAVWALLALLALLL-------- 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 219 amWAARVGRyqeacdilGKRYGVQARVAASGTTEAKfsekaenkysggygilfndryRKRTILGCVVATMQAWQYNAVGV 298
Cdd:COG2807  188 --WLPLLRR--------RPAAAAAAPAAASLRSLWR---------------------SPLAWLLTLFFGLQSLLYYAVVA 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 299 YLPLTLagiISGGLTGALTGSAV-VNALCGVTGGMIGSFILQRLGTRRQSMYGFAVVTLALLSLGALA-TTNPWLSLGLL 376
Cdd:COG2807  237 WLPPIL---RDAGLSAATAGLLLsLFQLAGIPGSLLVPLLADRLGDRRPLLLLLGLLGLAGLLGLLLApGSLPWLWAVLL 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 377 GsiiffhsAGPGG---LGMTIATL-SYPPAIRPTGVGFARAIMRTGAIAGlifwPMLWGALK------TEAFYWLAIVPF 446
Cdd:COG2807  314 G-------LGQGGlfpLALTLIGLrARTPAEAAALSGMAQSVGYLLAALG----PLLVGALHdatgswTAALLLLAALAV 382

                 ....*....
gi 446000578 447 LGFLTCVLI 455
Cdd:COG2807  383 LMLVAGLLA 391
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
32-214 2.35e-11

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 65.26  E-value: 2.35e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  32 IGVIFIALGGILidayqaAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIG 111
Cdd:COG0738   13 IYLLFFLWGFAT------ALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 112 AAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgsTSKKTGTSVNLWQMAWYVSTTVVYLVLLPLLLSGIAEEQ 191
Cdd:COG0738   87 LLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAAL---GPETAASRLNLLHAFFSLGALLGPLLGGLLILLGLSLSW 163
                        170       180
                 ....*....|....*....|...
gi 446000578 192 LWRYGIFIGAIFAVIFMILRYFF 214
Cdd:COG0738  164 HLPYLILAVLLLLLALLFLRSKL 186
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
34-455 3.49e-10

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 61.82  E-value: 3.49e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  34 VIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:COG2223    6 VLLLATLAFFLAFGVWYLWSVLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 114 AVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSvnlwqMAWYVSTTVVYLVLLPLLLSGIAEEQLW 193
Cdd:COG2223   86 LLALAVSYWLLLLLGLLLGIGGGGSFAVGIALVSKW--FPPDRRGLA-----LGLAAGGGNLGAAVAAFLAPLLIAAFGW 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 194 RYGIFIGAIFAVIFMILRYFFIGESAMWAARVGRyqeacdilgKRYGVQARVAASgtteakfsekaenkysggygilfnd 273
Cdd:COG2223  159 RNAFLILGILLLVVAVLAWLFLRDPPAGAAAAAK---------ASLRDQLEALRD------------------------- 204
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 274 ryrKRTILGCVVATMQAWQYNAVGVYLPLTLAGIISGGLTGALTGSAVVnALCGVTGGMIGSFILQRLGtRRQSMYGFAV 353
Cdd:COG2223  205 ---PRFWLLSLLYFGTFGSFIGFSSWLPPYLVDQFGLSAATAGLLAALF-ALLGALGRPLGGWLSDRIG-GRRVLLIVFA 279
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 354 VTLALLSLGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLsYPPAIRPTGVGFARAImrtGAIAGLIFwPMLWGAL 433
Cdd:COG2223  280 LMALGLLLLALALGSLWLFLVLFLLLGLALGGGNGAVFALVPDI-FPTKNAGAVYGLVGAA---GGLGGFLG-PLLFGAL 354
                        410       420
                 ....*....|....*....|....*...
gi 446000578 434 K------TEAFYWLAIVPFLGFLTCVLI 455
Cdd:COG2223  355 LdatgsyTAAFLVFAVLALVALVLTLLL 382
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
35-149 6.59e-10

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 61.07  E-value: 6.59e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAA 114
Cdd:COG2211  231 LLLLLAYLLFFLALALVAALLLYYFKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLL 310
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 446000578 115 VAIAP--SIWWVLVCRVIMGFGLGIDFPLATNAVAEL 149
Cdd:COG2211  311 LFFLGpgNLWLLLVLAALAGIGLGAILVLPWAMLADV 347
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
42-455 6.36e-09

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 57.60  E-value: 6.36e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  42 ILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSI 121
Cdd:cd17365    8 IVLDGFDLAVMGFVAPALAQDWGLSPAQLGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSV 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 122 WWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLwQMAWYVSTTVVYLVLLPLLLSGIAeeqlWRYGIFIGA 201
Cdd:cd17365   88 LQLALLRFLTGLGLGAAMPNAITLVSEY--APARRRSLAVTL-MFCGYPLGAALGGFLAAALIPAFG----WRSVFLLGG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 202 IFAVIFMILryffigesaMWAarvgryqeacdilgkrygvqarvaasgtteakfsekaenkysggygilfndryrkrTIL 281
Cdd:cd17365  161 VPPLILLPL---------LRG--------------------------------------------------------TLL 175
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 282 GCVVATMQAWQYNAVGVYLPLTLagiISGGLT--GALTGSAVVNaLCGVTGGMIGSFILQRLGTRRQSMyGFAVVTLALL 359
Cdd:cd17365  176 LWVTFFMGLLLVYLLNSWLPKLM---VEAGYSlsQALTITLLLN-IGGVIGSLLLGWLADRFGPKRVLA-LFFALGAVSL 250
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 360 SLGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLsYPPAIRPTGVGFARAIMRTGAIAGlifwPMLWGAL------ 433
Cdd:cd17365  251 ALLGVSPASLVLLYVLVFLAGACVNGAQVGLYALAARF-YPTEVRATGVGWALGVGRLGAILG----PLLGGLLlaaglg 325
                        410       420
                 ....*....|....*....|..
gi 446000578 434 KTEAFYWLAIVPFLGFLTCVLI 455
Cdd:cd17365  326 PESVFLALAIPAALGALAVLLL 347
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
32-149 1.05e-08

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 56.80  E-value: 1.05e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  32 IGVIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQ--KRAFIIGMGLCT 109
Cdd:COG2271  180 LRFWLLALAYFLVYFALYGFLTWLPTYLVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRrrKLVLAIGLLLAA 259
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 446000578 110 IGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAEL 149
Cdd:COG2271  260 LALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAEL 299
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
34-161 1.15e-08

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 56.79  E-value: 1.15e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  34 VIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:COG0738  212 LLLGGLAIFLYVGAEGAIGDWLPLYLKDVLGLSEATAALGLSLFWGGMTIGRFLGGFLLKRFGPVRLLRLSALLAAVGLL 291
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 446000578 114 AVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGSTSKKTGTSV 161
Cdd:COG0738  292 LALLAPGPWLALIGLALVGLGLSLMFPTIFSLALDGLGKRTAAAVSAV 339
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
59-217 6.20e-08

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 54.69  E-value: 6.20e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   59 IAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID 138
Cdd:TIGR00711  28 IAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPL 107
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446000578  139 FPLATNAVaeLRGSTSKKTGTSVNLWQMAWYVSTTVVYLVLLPlllsgIAEEQLWRYGIFIGAIFAVIFMILRYFFIGE 217
Cdd:TIGR00711 108 IPLSFSTL--LNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGW-----IIENYHWRWIFLINVPIGIIVVVVAFFILPR 179
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
35-221 9.67e-08

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 53.82  E-value: 9.67e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGNKYIAAQFGISPG-----LAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCT 109
Cdd:cd17364    1 IIIAGMGFFTDAYDLFSISLVTKILGRLYYGGKGslpsgVSGLVNAAALVGTIIGQLFFGFLGDRFGRKRVYGVELIIMI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 110 IGAAAVAIAPS------IWWVLVCRVIMGFGLGIDFPLATNAVAElrgSTSKKTG----TSVNLWQ----MAWYVSTTVV 175
Cdd:cd17364   81 IGTILSALSPGstplgvMGWLIFFRFLLGIGIGGDYPLSATIMSE---YANKKRRgaliAAVFAMQgfgiLAGAIVTLIL 157
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 446000578 176 YLVLLPLLLSGIAE--EQLWRYGIFIGAIFAVIFMILRYFFIGESAMW 221
Cdd:cd17364  158 SAIFEHPLPAGTYHhaDLVWRIVLGLGAIPALSVLYFRKHLLGTAGTW 205
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
41-142 1.05e-07

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 53.74  E-value: 1.05e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  41 GILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPS 120
Cdd:cd17504    4 AALAVMLVETMLSPALPTIQREFGTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPN 83
                         90       100
                 ....*....|....*....|..
gi 446000578 121 IWWVLVCRVIMGFGLGIdFPLA 142
Cdd:cd17504   84 LPVLIAGRALQGIGGAV-FPLA 104
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
66-452 1.66e-07

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 53.04  E-value: 1.66e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  66 SPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID---FPL- 141
Cdd:cd17360   33 STGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLGVGIAsmtVPLy 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 142 -ATNAVAELRGSTSKKTGTSVNLWQMAWYVSTTVVYLVllplllsgiaeEQLWRYGIFIGAIFAVIFMILrYFFIGESAM 220
Cdd:cd17360  113 iAEAAPPRIRGRLVTINVLFITGGQFVAYVINGAFSYL-----------PGGWRWMLGLAAVPAVLQFIG-LLFLPESPR 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 221 WAarvgryqeacdilgkrygvqarvaasgtteakfsekaenkysggygilfndRYRKRTILGCvvaTMQAWQ----YNAV 296
Cdd:cd17360  181 WP---------------------------------------------------STRRALIVGC---GLQAFQqfsgINTV 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 297 GVYLP--LTLAGIISGGLTGALtgsAVVNALCGVTGGMIGSFILQRLGTRRQSMYGFAVVTLALLSLGAlattnpWLSLG 374
Cdd:cd17360  207 MYYSAtiLQMAGFKDNQNAIWL---SLIVAGTNFIFTIVGMYLIDKFGRRKLLLISLFGVIVALVVLAV------WLALV 277
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446000578 375 LLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTG-AIAGLIFWPMLWGALKTEAFYWLAIVPFLGFLTC 452
Cdd:cd17360  278 GLILYLAFFAPGMGPVPWTVNSEIYPLWARGTGGGCAAAVNWVFnLLVSQTFLTLTQAIGPYGTFLLFAGLAVLGLIFI 356
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
58-455 2.11e-07

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 52.96  E-value: 2.11e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  58 YIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGI 137
Cdd:cd17325   21 LYAESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGLASAA 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 138 DFPLATNAVAELrgSTSKKTGTsvnlwQMAWYVSTTVVYLVLLPLLLSGIAEEQLWRYGIFIGAIFAVIFMILRYFFIGE 217
Cdd:cd17325  101 VWPAAMALIADI--APPEERGR-----AMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAALALLALVLALLLLPE 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 218 SamwaarvgryqeacdilgkrygvqarvaasgtteAKFSEKAENKYSGGYGILFNDRYRKRTILGCVVATMQAWQYNAVG 297
Cdd:cd17325  174 P----------------------------------RPPPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALE 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 298 VYLPLTLA--GIISGGLTG-ALTGSAVVNALCGVTGGMIGsfilQRLGTRRQSMYGFAVVTLALLSLGALATtnpWLSLG 374
Cdd:cd17325  220 PFLPLYAAelGGLSPAQIGlLFGAQGLASALSQPPAGKLS----DRIGRKPLILIGLLLSAVALLLLPLATS---FWLLL 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 375 LLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAIAGLIFWPMLWGALKTE-AFYWLAIVPFLGFLTCV 453
Cdd:cd17325  293 LLLALLGLGLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFAtPFLAAAALLLLAAVLFL 372

                 ..
gi 446000578 454 LI 455
Cdd:cd17325  373 LL 374
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
58-169 2.43e-07

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 52.58  E-value: 2.43e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  58 YIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGI 137
Cdd:cd17473  223 LLQERGGGSAALIGLALAIASLAGAIGALLFGRLKRRLGKRRLLAIGFALMALGFLLLALASGLWVVLLGAILAGLGFGL 302
                         90       100       110
                 ....*....|....*....|....*....|..
gi 446000578 138 DFPLATNAVAELrgSTSKKTGTSVNLWQMAWY 169
Cdd:cd17473  303 LLPTLNSWAMSL--VPPELRGRAMGIVTSAFF 332
PRK03893 PRK03893
putative sialic acid transporter; Provisional
36-135 3.04e-07

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 52.78  E-value: 3.04e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  36 FIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAV 115
Cdd:PRK03893  23 SAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLAC 102
                         90       100
                 ....*....|....*....|
gi 446000578 116 AIAPSIWWVLVCRVIMGFGL 135
Cdd:PRK03893 103 GFAPGYWTLFIARLVIGMGM 122
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
59-149 3.77e-07

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 52.17  E-value: 3.77e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  59 IAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID 138
Cdd:cd17324   25 IARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGGF 104
                         90
                 ....*....|.
gi 446000578 139 FPLATNAVAEL 149
Cdd:cd17324  105 WAIAAAYAADL 115
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
32-136 4.65e-07

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 51.81  E-value: 4.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  32 IGVIFIALGGILIDAYQAAMvgfgnKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIG 111
Cdd:cd17320    3 LLALLVALGPLAIDMYLPAL-----PAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILA 77
                         90       100
                 ....*....|....*....|....*
gi 446000578 112 AAAVAIAPSIWWVLVCRVIMGFGLG 136
Cdd:cd17320   78 SLLCALASSIEQLLIARFLQGLGAA 102
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
35-224 9.09e-07

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 51.10  E-value: 9.09e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGN-----KYIAA---QFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMG 106
Cdd:cd17356    4 AFVSLGGFLFGYDTGSISGILNmksfqKYFADntgTYYPSSSRQGLIVSIVNLGSFFGALISSFLSDRIGRKKSIQIGCV 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 107 LCTIGAA-AVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTtvVYLVLLPLLLS 185
Cdd:cd17356   84 IYIIGAIiQVAAIGKWYQLIVGRIIAGLGVGFASVLVPVYQSEV--APKHIRGTLVSLYQLAITIGI--LVAYCINYGTH 159
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 446000578 186 GIAEEQLWRYGIFIGAIFAVIFMILrYFFIGESAMWAAR 224
Cdd:cd17356  160 KLDGSAQWRIPLGLQIVWGLLLLIG-MFFLPESPRWLYR 197
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
61-137 9.45e-07

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 50.63  E-value: 9.45e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446000578  61 AQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGI 137
Cdd:cd17477   24 EREGVSTALIGLVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAG 100
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
34-213 9.89e-07

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 50.65  E-value: 9.89e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  34 VIFIALGGILIDAYQAAMVGFGNKYIAAQ-FGISPGLAATVNASVL----IAALIGGLLANRVINRFGQKRAFIIGMGLC 108
Cdd:cd17504  178 NVLLANITALLAGFGMFMVFQLLPQLLQLpTPTGFGLGITEAGLLLlpgaLVMLIAGPLAGRLIARVGPRRVLLIGLVIS 257
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 109 TIGAAAVAIAP-SIWWVLVCRVIMGFGLGIDFPLATNAVAEL--RGSTSKKTGTSVNLWQM----AWYVSTTVVYLVLLP 181
Cdd:cd17504  258 AVGLLLLALLHsSLWALVVALLLIGIGLGLAFASLPNIVVESvpPDRTGIATGMNTVLRTIgsaiGPAIAGAILTTYTVS 337
                        170       180       190
                 ....*....|....*....|....*....|..
gi 446000578 182 LLLSGIAEEQLWRYGIFIGAIFAVIFMILRYF 213
Cdd:cd17504  338 ITSGGVPTEGAYVLAFLIGAALALAALLLSLL 369
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
59-142 1.18e-06

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 50.63  E-value: 1.18e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  59 IAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID 138
Cdd:cd17321   22 IARDLGASPSQLQWVVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGIGAAAI 101

                 ....
gi 446000578 139 FPLA 142
Cdd:cd17321  102 MPAS 105
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
60-147 3.36e-06

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 49.13  E-value: 3.36e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  60 AAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIdF 139
Cdd:cd17489   23 AHDLGGSEAVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGA-F 101

                 ....*...
gi 446000578 140 PLATNAVA 147
Cdd:cd17489  102 TTAAATLV 109
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
63-162 3.51e-06

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 49.27  E-value: 3.51e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  63 FGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLA 142
Cdd:cd17362   34 YNLSSLQSGLVVSGSLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLIYGVGIGLAMHAA 113
                         90       100
                 ....*....|....*....|
gi 446000578 143 TNAVAELRGSTSKKTGTSVN 162
Cdd:cd17362  114 PVYIAETSPSHIRGLLVSLK 133
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
59-148 3.55e-06

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 49.11  E-value: 3.55e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  59 IAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID 138
Cdd:cd17503   22 IMGDLGASLDTVQWVITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFGGGVL 101
                         90
                 ....*....|
gi 446000578 139 FPLATNAVAE 148
Cdd:cd17503  102 IPLAQTILLR 111
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
59-167 3.90e-06

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 48.72  E-value: 3.90e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  59 IAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID 138
Cdd:cd17474   25 IAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIGAAGL 104
                         90       100
                 ....*....|....*....|....*....
gi 446000578 139 FPLATNAVAELrgSTSKKTGTSVNLWQMA 167
Cdd:cd17474  105 GPLALTLIGDL--FEGGERAKAMGLYEAA 131
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
34-137 4.30e-06

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 48.77  E-value: 4.30e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  34 VIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:cd06173  210 LRLLLLALALFALLGGALTVLLPLLAKEVLGGGAAGYGLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLALL 289
                         90       100
                 ....*....|....*....|....
gi 446000578 114 AVAIAPSIWWVLVCRVIMGFGLGI 137
Cdd:cd06173  290 VLGLSPSLWLLLAALFLLGLAGGL 313
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
79-149 8.46e-06

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 47.95  E-value: 8.46e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446000578  79 IAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAEL 149
Cdd:cd17473   46 LFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDY 116
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
59-149 9.76e-06

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 47.56  E-value: 9.76e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  59 IAAQFGiSPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID 138
Cdd:cd17502   22 IVAEFG-GLSLVSWVGTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGIGGGGL 100
                         90
                 ....*....|.
gi 446000578 139 FPLATNAVAEL 149
Cdd:cd17502  101 MSLAFIIIADL 111
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
52-216 2.90e-05

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 46.02  E-value: 2.90e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  52 VGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIM 131
Cdd:cd17319   22 ISVAAPTIMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLL 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 132 GFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTVVYLVLLPlllsgIAEEQLWRYGIFIGAIFAVIFMILR 211
Cdd:cd17319  102 GVAEAGFFPGAIKALAEW--FPARERGRATGLFNSGAPLGAAIGPPLSGW-----LLLLFGWRWAFIIEGLLGLLLAVLW 174

                 ....*
gi 446000578 212 YFFIG 216
Cdd:cd17319  175 WFYLR 179
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
69-134 4.39e-05

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 45.26  E-value: 4.39e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446000578  69 LAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFG 134
Cdd:cd17317   26 LVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVT 91
MFS_MosC_like cd17393
Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of ...
64-149 4.52e-05

Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters; The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340951 [Multi-domain]  Cd Length: 373  Bit Score: 45.71  E-value: 4.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  64 GISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLAT 143
Cdd:cd17393  231 GASAALAALGYAVFSLAMTVGRLFGDRLVDRFGDVAVLRAGALLAALGLLLALLAPSVWVALAGFALMGLGLSVVVPLAF 310

                 ....*.
gi 446000578 144 NAVAEL 149
Cdd:cd17393  311 SAAGAL 316
MFS_STP cd17361
Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; ...
73-137 4.92e-05

Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; The plant Sugar transport protein (STP) subfamily includes STP1-STP14; they are also called hexose transporters. They mediate the active uptake of hexoses such as glucose, 3-O-methylglucose, fructose, xylose, mannose, galactose, fucose, 2-deoxyglucose and arabinose, by sugar/hydrogen symport. Several STP family transporters are expressed in a tissue-specific manner, or at specific developmental stages. STP1 is the member with the highest expression level of all members and high expression is detected in photosynthetic tissues, such as leaves and stems, while roots, siliques, and flowers show lower expression levels. It plays a major role in the uptake and response of Arabidopsis seeds and seedlings to sugars. The STP subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340919 [Multi-domain]  Cd Length: 390  Bit Score: 45.32  E-value: 4.92e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446000578  73 VNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGI 137
Cdd:cd17361   56 FTSSLYLAGLVASLLASYVTRKWGRKPSMLIGGVLFLVGAALNAAAQNIAMLIVGRILLGFGVGF 120
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
34-217 6.04e-05

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 45.28  E-value: 6.04e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  34 VIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALI----GGLLANRVINRFGQKRAFI-IGMGLC 108
Cdd:COG2211   12 KLAYGLGDLGLNLAFGLLSAYLLYFYTDVLGLSAALVGLILLVARLWDAItdplIGALSDRTRTRWGRRRPWIlIGAIPL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 109 TIGAAAVAIAPS------IWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVSTTVVYLVLLPL 182
Cdd:COG2211   92 ALSFVLLFTAPDlsptgkLIYALVTYLLLGLAYTLVNIPYSALGAEL--TPDYEERTRLSSWRFAFAGLGGLLASVLPPP 169
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 446000578 183 LLSGIAEEQL--WRYGIFIGAIFAVIFMILRYFFIGE 217
Cdd:COG2211  170 LVAAFGGDAAlgYRLTALIFAVLGLLAFLLTFFGTKE 206
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
62-152 7.64e-05

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 44.87  E-value: 7.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  62 QFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIA-----PSIWWVLVCRVIMGFGLG 136
Cdd:cd17320  231 QLGLSPAQFGLLFALNAIALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAallggLSLWPLVAPLFLIFFGFG 310
                         90
                 ....*....|....*.
gi 446000578 137 IDFPLATNAVAELRGS 152
Cdd:cd17320  311 LIFPNATSLALEPFPH 326
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
63-162 9.21e-05

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 44.48  E-value: 9.21e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  63 FGISPGLAATVNASVLIAALIGGLLANRVIN-RFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPL 141
Cdd:cd17474  229 YGISPIIIGLLFAGWSVLLALGSLFVGRLLKkRFGARRILVIGLLLYALSLLLLGFVPSLALLLIAIVLFGLGLGLNLPL 308
                         90       100
                 ....*....|....*....|.
gi 446000578 142 ATNAVAELRGSTSKKTGTSVN 162
Cdd:cd17474  309 LTTLVTELAPEEERGTASSLY 329
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
35-159 1.51e-04

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 44.33  E-value: 1.51e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   35 IFIALGGILIDAYQAAMVGFGNK-----YIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAF---IIGMG 106
Cdd:TIGR00887  18 IVIAGVGFFTDSYDLFCISLVTKmlgyvYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYgmeLIIMI 97
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 446000578  107 LCTIGAAAVAIAPSIW---WVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGT 159
Cdd:TIGR00887  98 IATVASGLSPGSSPKSvmaTLCFWRFWLGVGIGGDYPLSAIITSEF--ATKKWRGA 151
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
33-140 1.77e-04

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 43.74  E-value: 1.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  33 GVIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNAsvlIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGA 112
Cdd:cd17489  195 KVLPPALILFLASIAYGAISTFLPLYAAERGISNAGLFFTVYA---IALLLSRPFSGKLSDRKGPKTVIIPGLLLLALGL 271
                         90       100
                 ....*....|....*....|....*...
gi 446000578 113 AAVAIAPSIWWVLVCRVIMGFGLGIDFP 140
Cdd:cd17489  272 LLLSFAGSPWMLLLAAVLYGLGFGLLFP 299
2_A_01_02 TIGR00880
Multidrug resistance protein;
82-218 1.98e-04

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 41.48  E-value: 1.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   82 LIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSV 161
Cdd:TIGR00880  12 LIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADI--YPPEERGVAL 89
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 446000578  162 NLWQMAwyvstTVVYLVLLPLLLSGIAEEQLWRYGIFIGAIFAVIFMILRYFFIGES 218
Cdd:TIGR00880  90 GLMSAG-----IALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
58-140 3.42e-04

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 42.57  E-value: 3.42e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  58 YIAAQFGISPGLAATVNASV-LIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLG 136
Cdd:cd17330  200 FLKDRFGFSPSQIGLLLALVgIAGILAQLLLIPRLAKRLGERKLLRLGLLLAIIGLLLLPFASSVPLLVLAAAILAFGTG 279

                 ....
gi 446000578 137 IDFP 140
Cdd:cd17330  280 IVFP 283
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
58-146 3.54e-04

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 42.55  E-value: 3.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  58 YIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQ-KRAFIIGMGLCTIGAAAVAIAP---SIWWVLVCRVIMGF 133
Cdd:cd17502  193 YFQLVLGDSATKSGVRLLPLIIGLVIGSIISGALISKTGRyKPLIVIGTILMSVGAGLLTTLTldtSKWLLIGYLILLGL 272
                         90
                 ....*....|...
gi 446000578 134 GLGIDFPLATNAV 146
Cdd:cd17502  273 GLGIGFQQPLVAV 285
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
35-414 4.16e-04

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 42.67  E-value: 4.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGNKYIAAQF-GISPGLAATVNASVLIAA-----LIGGLLANRVINRFGQKRAFIIGMGLC 108
Cdd:cd17367    1 ILGGSVGNLVEWYDWYVYAAFALYFAPQFfPSGDPTVALLSTAAVFAVgflmrPIGGWLFGRLADRIGRRAALTLSVSLM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 109 TIGAAAVAIAPS-----IW---WVLVCRVIMGFGLGIDFPLATNAVAELRGSTSKKTGTSvnlWQmawYVSTTV---VYL 177
Cdd:cd17367   81 AAGSLVIAVTPTyatigIWapiILLLARLLQGLSVGGEYGTSATYLSEVAPPGRRGFYSS---FQ---YVTLIGgqlLAL 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 178 VLLPLLLSGIAEEQL----WRYGIFIGAIFAVIFMILRYffigesamwaarvgRYQEacdilgkrygvqarvaasgtTEA 253
Cdd:cd17367  155 GVLLVLQHTLGEDQMaawgWRIPFLLGGVLAVVVLWLRR--------------GLEE--------------------TES 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 254 KFSEKAENKYSGgyGILFNDRYRKRTILGCVVATMQAWQYN-AVGVYLPLTL---AGIISGGLTGALTGSAVVNALCGVT 329
Cdd:cd17367  201 FEAIAESNEASA--GTLRELRRHPRELLLVVGLTAGGTLAFyTWTTYLQKFLvntAGFSKGDATWITTAALLVFMLLQPL 278
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 330 GGMIGSFIlqrlgTRRQSMYGFAV---VTLALLSLGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLsYPPAIRPT 406
Cdd:cd17367  279 GGRLSDRI-----GRRPLLLFFGIggtLATVPLLSALDHTDSPYTAFALVLVGLVFLSGYTSINAVVKAEL-FPTHVRAL 352

                 ....*...
gi 446000578 407 GVGFARAI 414
Cdd:cd17367  353 GVGLPYAL 360
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
76-158 4.98e-04

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 42.21  E-value: 4.98e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  76 SVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAP--SIWWVLVCRVIMGFGLGIDFPLATNAVAELRGST 153
Cdd:cd17332  264 LILSGALLALLPWPPLKKRFGKKKAFFIGLLLAILGLLLLFFLPpgNLVLILVLAVLAGIGYGGANLLPWAMLADVIDYG 343

                 ....*
gi 446000578 154 SKKTG 158
Cdd:cd17332  344 ELKTG 348
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
34-149 8.94e-04

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 41.43  E-value: 8.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  34 VIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:cd17316  179 TLLLILLWFFISFGYYGLTTFLPTYLQTVLGLSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILAL 258
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 446000578 114 AVAIAP--SIWWVLVCRVIMGFGLGIDFPLATNAVAEL 149
Cdd:cd17316  259 PLFYLLsgSPTLLLLLLFILSFFVGGVWGALYAYLAEL 296
PRK03633 PRK03633
putative MFS family transporter protein; Provisional
73-172 1.07e-03

putative MFS family transporter protein; Provisional


Pssm-ID: 179614 [Multi-domain]  Cd Length: 381  Bit Score: 41.18  E-value: 1.07e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  73 VNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVaeLRGS 152
Cdd:PRK03633  46 VSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESAL--MCSG 123
                         90       100
                 ....*....|....*....|
gi 446000578 153 TSKKTGTSVNLWQMAWYVST 172
Cdd:PRK03633 124 TSRNRGRLLAAYMMVYYLGT 143
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
78-140 1.18e-03

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 41.08  E-value: 1.18e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446000578  78 LIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGlGIDFP 140
Cdd:cd17388  253 LLHALFQAFVTGPIAKRLGEKRAILLGLAADALGFLLLAFATQGWMVFPILILLALG-GIAGP 314
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
34-164 1.64e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 40.67  E-value: 1.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  34 VIFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:cd17329    1 LWVLLIGSFLNRLGFFMVWPFMAIYLHQQLGLSASIVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFA 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446000578 114 AVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGSTSKKTGTSVNLW 164
Cdd:cd17329   81 LLGFAHSPWLFAIALVLTGFGGGLFEPASEAMIADVTTPENRTRAFSLLYW 131
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
63-149 1.86e-03

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 40.64  E-value: 1.86e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  63 FGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGA---AAVAIAPSIWWVLVCRVIMGFGLGIDF 139
Cdd:cd17503  209 LGYSAFESGLVLAPGGLASAILSPLVGRLLDKFGPRLLLLAGLLLLALGTlllAFLTPDTSLWLIILPLFIRGLGMGLVF 288
                         90
                 ....*....|.
gi 446000578 140 -PLATNAVAEL 149
Cdd:cd17503  289 mPLNTLALNSL 299
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
59-415 1.96e-03

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 40.30  E-value: 1.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  59 IAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGID 138
Cdd:cd17328   25 IQSDFLIDDSLAGLLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVGIGEASY 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 139 FPLATNAVAELRgsTSKKTGTSVNLWQMAWYVSTTVVYLVLLPLLLSGIAeeqlWRYGIFIGAIFAVIFMILRYFFIGEs 218
Cdd:cd17328  105 SPIAPTIIADLF--PKEKRTRALGVFYFAIPLGSGLGYVVGGLVAQATGG----WRWAFRVTGVLGVLLAILLLLFVRE- 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 219 amwaarvgryqeacdilgKRYGVQARVAASGTTeakfsekaenkySGGYGILFNDRYRKRTILGCVVA-TMQAWQYNAVG 297
Cdd:cd17328  178 ------------------PPRGAAEGGVMAKST------------ATSFLADLKALAKNPSFILSTLGfTAVSFVTGALA 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 298 VYLPLTLAGIISGGLTGALTGSAV---VNALCGVTGGMIGSFILQRLGTRRQSMY------GFAVVTLALLSLGALATTN 368
Cdd:cd17328  228 FWAPTFFLRAFGVGDLSSADVGLIfgaITCIAGVLGVLLGGILADRLRRKTPRADplvcavGLLAAAPFLFLALVLALSN 307
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 446000578 369 PWLSLGLLGSIIFFHSAgpgGLGMTIATLSY--PPAIRPTGVGFARAIM 415
Cdd:cd17328  308 LLLAWVLLFLGEFLLSL---NWAPVFAILLYvvIPTRRSTASAIQILLS 353
xylE PRK10077
D-xylose transporter XylE; Provisional
32-237 2.02e-03

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 40.45  E-value: 2.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  32 IGVIFIALGGILIDAYQAAMV-----GFGNKYIAAQ---FGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFII 103
Cdd:PRK10077  11 FSITLVATLGGLLFGYDTAVIsgtveSLNTVFVAPQnlsESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 104 GMGLCTIGAAAVAI-----------APSIWWVLVC-RVIMGFGLGIDFPLATNAVAELrgSTSKKTGTSVNLWQMAWYVS 171
Cdd:PRK10077  91 AAVLFFISALGSAWpefgftsigpdNTGYVPEFVIyRIIGGIGVGLASMLSPMYIAEI--APAHIRGKLVSFNQFAIIFG 168
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446000578 172 TTVVYLVLLPLLLSGIAE---EQLWRYGIFIGAIFAVIFMILrYFFIGESAMWAARVGRYQEACDILGK 237
Cdd:PRK10077 169 QLVVYFVNYFIARSGDASwlnTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRK 236
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
35-256 2.21e-03

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 40.73  E-value: 2.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578   35 IFIALG-GILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:TIGR01299 168 LFFVLGlALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAF 247
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  114 AVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGstSKKTGTSVNLWQMAWYVSTTVVYLVLLPLL-------LSG 186
Cdd:TIGR01299 248 FSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLA--QEKRGEHLSWLCMFWMIGGIYAAAMAWAIIphygwsfQMG 325
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446000578  187 IAEE-QLWRYGIFIGAiFAVIFMILRYFFIGESAMWAARVGRYQEACDILGKRYGVQARvaASGTTEAKFS 256
Cdd:TIGR01299 326 SAYQfHSWRVFVIVCA-FPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMR--AKGHPEKVFS 393
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
76-227 2.29e-03

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 40.08  E-value: 2.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  76 SVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGSTSK 155
Cdd:cd17437   40 SLNIISLVGSLAAGRTSDWIGRRYTIALAALIFFVGALLMGVAPNYPVLMVGRFVAGIGVGFALMIAPVYTAEVAPASSR 119
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446000578 156 KTGTS-----VNLWQMAWYVSTtvvylvllpLLLSGIAEEQLWRYGIFIGAIFAVIFMIlRYFFIGESAMWAARVGR 227
Cdd:cd17437  120 GFLTSfpeifINIGILLGYVSN---------YAFSGLPLHVGWRLMLGVGAVPSLFLAI-GVLAMPESPRWTPAVRR 186
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
39-146 2.61e-03

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 39.85  E-value: 2.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  39 LGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIA 118
Cdd:cd17321  175 LAAFLLGAALGGLLFLLPLYLQGVLGYSPLQAGLALLPLALAMLVAAPLAGRLADRFGPRLVLVAGLLLTAVGLLLLALL 254
                         90       100       110
                 ....*....|....*....|....*....|.
gi 446000578 119 P---SIWWVLVCRVIMGFGLGIDFPLATNAV 146
Cdd:cd17321  255 GadsSVWLLLPGLVLLGLGLGLFATPLTNAA 285
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
59-165 2.76e-03

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 39.90  E-value: 2.76e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  59 IAAQFGISPG-LAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGI 137
Cdd:cd17490  221 IAKQLGASSFqLGLLSIIYLLPNALASLLSGTLFYKKLGERNTIIIGFLLLGAYCFLIPFAPNLTLLYLLQALNGFGTGI 300
                         90       100
                 ....*....|....*....|....*...
gi 446000578 138 DFPLATNAVaeLRGSTSKKTGTSVNLWQ 165
Cdd:cd17490  301 LFPLLMSLS--IEGVPAEQRSTAMGFFQ 326
MFS_SLCO_OATP cd17336
Solute carrier organic anion transporters of the Major Facilitator Superfamily of transporters; ...
35-122 3.89e-03

Solute carrier organic anion transporters of the Major Facilitator Superfamily of transporters; Solute carrier organic anion transporters (SLCOs) are also called organic anion transporting polypeptides (OATPs) or SLC21 (Solute carrier family 21) proteins. They are sodium-independent transporters that mediate the transport of a broad range of endo- as well as xenobiotics. Their substrates are mainly amphipathic organic anions with a molecular weight of more than 300Da, although there are a few known neutral or positively charged substrates. These include drugs including statins, angiotensin-converting enzyme inhibitors, angiotensin receptor blockers, antibiotics, antihistaminics, antihypertensives, and anticancer drugs. SLCOs/OATPs can be classified into 6 families (SLCO1-6 or OATP1-6) and each family may have subfamilies (e.g. OATP1A, OATP1B, OATP1C). Within the subfamilies, individual members are numbered according to the chronology of their identification and if there is already an ortholog known, they are given the same number. For example, the first SLCO identified, is rat OATP1A1 (encoded by the Slco1a1 gene). The second SLCO identified is the first human SLCO from the same subfamily and is called OATP1A2 (encoded by the SLCO1A2 gene). There are 11 human SLCOs/OATPs. SLCOs belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340894 [Multi-domain]  Cd Length: 411  Bit Score: 39.53  E-value: 3.89e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATV-NASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAA 113
Cdd:cd17336  198 ILLLLAIVFESFAISGFSTFLPKYLETQFRLSASLASLLtGLILVPGAALGILLGGLIIKKFKLTARGLAKFVLILSLLS 277

                 ....*....
gi 446000578 114 AVAIAPSIW 122
Cdd:cd17336  278 VILYISLFF 286
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
58-149 3.90e-03

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 39.45  E-value: 3.90e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  58 YIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGI 137
Cdd:cd17324  224 FLTDVPGFSSSAIIGLLLLFGVAGVVGSPLAGRLADRGGRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFA 303
                         90
                 ....*....|..
gi 446000578 138 DFPLATNAVAEL 149
Cdd:cd17324  304 AHSALQTRVLRL 315
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
37-152 5.00e-03

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 39.08  E-value: 5.00e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  37 IALGGILIDAYQAAMVGFgNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVA 116
Cdd:cd17478    1 LSLGHFLNDFYQGFLPAL-LPLLIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLG 79
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 446000578 117 IAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGS 152
Cdd:cd17478   80 FAPNYWLLLLLVALAGIGSAAFHPEGARLASQAAGG 115
PRK12307 PRK12307
MFS transporter;
35-211 5.13e-03

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 39.14  E-value: 5.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAA 114
Cdd:PRK12307  20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 115 VAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGSTSKKTGTsvnlwqmAWYVSTTVVYLVLLPLLLSGIAEEQLWR 194
Cdd:PRK12307 100 SGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKAS-------AFLVSGFGIGNIIAAYFMPSFAEAYGWR 172
                        170
                 ....*....|....*..
gi 446000578 195 YGIFIGAIFAVIFMILR 211
Cdd:PRK12307 173 AAFFVGLLPVLLVIYIR 189
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
36-301 5.90e-03

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 39.14  E-value: 5.90e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  36 FIALG-GILIDAYQAAMVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAA 114
Cdd:cd17438    1 FFVLGlALMADGVEVFVVGFVLPSAEKDMCLSSSNKGMLGLIVYLGMMAGAFIWGGLADKLGRKRCLIISLAINASFAFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 115 VAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRgsTSKKTGTSVNLWQMAW-----YVSTTVVYLVLLPLLLSGIAE 189
Cdd:cd17438   81 SSFVQGYGAFLFCRLISGFGIGGSLPIVFAYFSEFL--AREKRGEHLSWLCMFWmigglYASAMAWSIIPHYGWGFSMGT 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578 190 E---QLWRYGIFIGAIFAVIFMILRYfFIGESAMWAARVGRYQEACDILGKRYGVQARvaASGTTEAKFSekaenkysgg 266
Cdd:cd17438  159 NyhfHSWRVFVIICALPCIASIIALK-FMPESPRFLLEMGKHDEAWMILKNIHDTNMR--AKGTPEKVFT---------- 225
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 446000578 267 ygilFNDRYRKRTILGCVVATMQAWQYNAVGVYLP 301
Cdd:cd17438  226 ----VSNIKRKNTLFLAVVWFTMAFSYYGLTVWFP 256
MFS_MosC_like cd17393
Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of ...
59-136 7.26e-03

Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters; The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340951 [Multi-domain]  Cd Length: 373  Bit Score: 38.39  E-value: 7.26e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446000578  59 IAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLG 136
Cdd:cd17393   25 IKDRLGLSDAALGLLLLALGVGALVAMPLAGRLVARFGSRRVTRLGALLLLLALLLLGLAPSVPALALALFLFGAANG 102
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
35-142 7.50e-03

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 38.46  E-value: 7.50e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  35 IFIALGGILIDAYQAAMVGFGN---KYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIG 111
Cdd:cd17333  199 PSIILGALALFLYVGAETAFSSwvpSYLVEKKHVSDGLAGYLLSGFWVGITIGRLLGGPISRRIKPHTLLVLSGSGALLG 278
                         90       100       110
                 ....*....|....*....|....*....|.
gi 446000578 112 AAAVAIAPSIWWVLVCRVIMGFGLGIDFPLA 142
Cdd:cd17333  279 LLILLLAPTLVVGLVATALLGLFMAALFPTI 309
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
58-148 7.55e-03

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 38.37  E-value: 7.55e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  58 YIAAQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGI 137
Cdd:cd17475   21 FLQEDLHLSLAQVGLLLSALNLGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGAGYGS 100
                         90
                 ....*....|.
gi 446000578 138 DFPLATNAVAE 148
Cdd:cd17475  101 VQPGGGRAIMR 111
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
39-134 9.04e-03

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 38.33  E-value: 9.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  39 LGGILIDAYQAAMvgfgnKYIAAQFGISPGL-AATVnaSVLIAAL-IGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVA 116
Cdd:PRK11043  17 LGFLATDMYLPAF-----KAIQADLQTSASAvSASL--SLFLAGFaLGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGML 89
                         90
                 ....*....|....*...
gi 446000578 117 IAPSIWWVLVCRVIMGFG 134
Cdd:PRK11043  90 WVESAAQLLVLRFVQAVG 107
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
10-141 9.48e-03

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 38.31  E-value: 9.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446000578  10 YSISRPQDVIDIVNKNSAINTSIGVIFIALGGILIDAYQAAMVGFGNKYIAAQFGiSPGLAATVNASVLIAALIGGLLAN 89
Cdd:cd17478  173 KKPEAKKAAAKSSARSTLKGVWRALLLLLIIVFLRSWVLSSLTTFLPFYLVQRGY-SLVFAGLLLSLFLFAGAIGTLIGG 251
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446000578  90 RVINRFGQKRAFIIGMGLCTIGAAAVAIAPSiWWVLVCRVIMGFGLGIDFPL 141
Cdd:cd17478  252 PLSDRFGRRRVIIASLLLAAPFLLLFLLTPG-IWSYILLVLAGFLLFASFPV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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