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Conserved domains on  [gi|445971941|ref|WP_000049796|]
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DUF1064 domain-containing protein [Staphylococcus aureus]

Protein Classification

DUF1064 domain-containing protein( domain architecture ID 10533835)

DUF1064 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1064 pfam06356
Protein of unknown function (DUF1064); This family consists of several phage and bacterial ...
 1-113 4.76e-54

Protein of unknown function (DUF1064); This family consists of several phage and bacterial proteins of unknown function.


:

Pssm-ID: 428901  Cd Length: 117  Bit Score: 165.35  E-value: 4.76e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445971941    1 MSKYNAKKVEYKGIVFDSKVECEYYQYLESNMNGTNYDRIEIQPKFELQPKFGKQ----RPITYIADFSLWKEGKLVEVI 76
Cdd:pfam06356   1 RSKYNAKKVTIDGITFDSKDEGRYYQYLKKLKRAGKILNFELQPKFELQPSFKKNgktyRPIKYVADFLIYHLDGREEVI 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 445971941   77 DVKGKATEVANIKAKIFRYQYRDANLTWICKAPKYTG 113
Cdd:pfam06356  81 DVKGMATEVANIKRKLFDYKYRELKLTWICRSLKYSG 117
 
Name Accession Description Interval E-value
DUF1064 pfam06356
Protein of unknown function (DUF1064); This family consists of several phage and bacterial ...
 1-113 4.76e-54

Protein of unknown function (DUF1064); This family consists of several phage and bacterial proteins of unknown function.


Pssm-ID: 428901  Cd Length: 117  Bit Score: 165.35  E-value: 4.76e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445971941    1 MSKYNAKKVEYKGIVFDSKVECEYYQYLESNMNGTNYDRIEIQPKFELQPKFGKQ----RPITYIADFSLWKEGKLVEVI 76
Cdd:pfam06356   1 RSKYNAKKVTIDGITFDSKDEGRYYQYLKKLKRAGKILNFELQPKFELQPSFKKNgktyRPIKYVADFLIYHLDGREEVI 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 445971941   77 DVKGKATEVANIKAKIFRYQYRDANLTWICKAPKYTG 113
Cdd:pfam06356  81 DVKGMATEVANIKRKLFDYKYRELKLTWICRSLKYSG 117
 
Name Accession Description Interval E-value
DUF1064 pfam06356
Protein of unknown function (DUF1064); This family consists of several phage and bacterial ...
 1-113 4.76e-54

Protein of unknown function (DUF1064); This family consists of several phage and bacterial proteins of unknown function.


Pssm-ID: 428901  Cd Length: 117  Bit Score: 165.35  E-value: 4.76e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445971941    1 MSKYNAKKVEYKGIVFDSKVECEYYQYLESNMNGTNYDRIEIQPKFELQPKFGKQ----RPITYIADFSLWKEGKLVEVI 76
Cdd:pfam06356   1 RSKYNAKKVTIDGITFDSKDEGRYYQYLKKLKRAGKILNFELQPKFELQPSFKKNgktyRPIKYVADFLIYHLDGREEVI 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 445971941   77 DVKGKATEVANIKAKIFRYQYRDANLTWICKAPKYTG 113
Cdd:pfam06356  81 DVKGMATEVANIKRKLFDYKYRELKLTWICRSLKYSG 117
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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