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Conserved domains on  [gi|445954785|ref|WP_000032640|]
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MULTISPECIES: fimbrial protein [Enterobacteriaceae]

Protein Classification

fimbrial protein( domain architecture ID 646)

fimbrial protein similar to the type-1 fimbrial major subunit FimA, which is transported to the outer membrane by the lipoprotein sorting system, and a mature or processed FimA protein on the outer membrane is autopolymerized to form Fim fimbriae

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fimbrial super family cl01416
Fimbrial protein;
1-188 4.33e-35

Fimbrial protein;


The actual alignment was detected with superfamily member PRK15283:

Pssm-ID: 445401  Cd Length: 186  Bit Score: 121.80  E-value: 4.33e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   1 MSKFAKTAIAAAMVMGavVSSSAFAAGNN-GTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTPKDFQIRL 79
Cdd:PRK15283   1 MNTAVKAAVAAALVMG--VSSFANAAGSNtGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  80 QDCVFTTETNMETTFTGTNYAGPANTDNYALFNVDSGvAMNHVSLVIGDTHGKGYKVGEKIVQPIVMDTSTSKGkdKQTL 159
Cdd:PRK15283  79 ENCAFTTEKEASTVFSAIGNESSANPGSVALMRIGGG-EMAGSSIVIGNHLGSAIKLGDAYSENLTMNGSVAAA--KQTL 155

                        170       180       190
                 ....*....|....*....|....*....|.
gi 445954785 160 NFKAWLVGETDAP--DLGQFETLTTFQITYL 188
Cdd:PRK15283 156 NFKAWVKGDSAAStiDTGEFSSTVNFTISYL 186
 
Name Accession Description Interval E-value
PRK15283 PRK15283
fimbrial major subunit StfA;
1-188 4.33e-35

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 121.80  E-value: 4.33e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   1 MSKFAKTAIAAAMVMGavVSSSAFAAGNN-GTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTPKDFQIRL 79
Cdd:PRK15283   1 MNTAVKAAVAAALVMG--VSSFANAAGSNtGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  80 QDCVFTTETNMETTFTGTNYAGPANTDNYALFNVDSGvAMNHVSLVIGDTHGKGYKVGEKIVQPIVMDTSTSKGkdKQTL 159
Cdd:PRK15283  79 ENCAFTTEKEASTVFSAIGNESSANPGSVALMRIGGG-EMAGSSIVIGNHLGSAIKLGDAYSENLTMNGSVAAA--KQTL 155

                        170       180       190
                 ....*....|....*....|....*....|.
gi 445954785 160 NFKAWLVGETDAP--DLGQFETLTTFQITYL 188
Cdd:PRK15283 156 NFKAWVKGDSAAStiDTGEFSSTVNFTISYL 186
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
6-187 8.11e-28

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 102.42  E-value: 8.11e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   6 KTAIAAAMVMGAVVSSSAFAAgnNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTT-PKDFQIRLQDCVF 84
Cdd:COG3539    2 KKLLLALLLALALSAAAAAAA--DGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSgPKPFSIKLTNCDA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  85 TTETNMETTFTGTnyagpANTDNYALFNVDSGVAMNHVSLVIGDTHGKGYKVGEKiVQPIVMDTSTSkgkdkQTLNFKAW 164
Cdd:COG3539   80 GTSNSVKVTFTGT-----ADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTP-SSAVTLTSNGS-----ATLPFYAR 148

                        170       180
                 ....*....|....*....|...
gi 445954785 165 LVGETDAPDLGQFETLTTFQITY 187
Cdd:COG3539  149 YVATGATVTAGSFNATATFTIDY 171
Fimbrial pfam00419
Fimbrial protein;
34-187 6.05e-05

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 41.27  E-value: 6.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   34 FYGTIE--DSPCSIVPDDhKLEVDMGDIGAAKLTGGG-TTTPKDFQIRLQDCVFTTETNMETTFTGTnyagpANTDNYAL 110
Cdd:pfam00419   3 FTGTVTrvPATCKITAGT-PIEVDFGQIPVNELNAGGeGSRQKPFSITLECSSGSSAVKVTVGLFGT-----ADASSPNL 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  111 FNVDSGVamnhvslviGDTHGKGYKVGEKIVQPIVMDTSTSKGKDKQT------LNFKAWLVG-ETDAPDLGQFETLTTF 183
Cdd:pfam00419  77 LLTGNGA---------GAATGVGIRLYDANGGALPPNNGTSSIPVSATaavatgITFTASLVAtTGGTPTAGDFNATATI 147


                  ....
gi 445954785  184 QITY 187
Cdd:pfam00419 148 VVDY 151
 
Name Accession Description Interval E-value
PRK15283 PRK15283
fimbrial major subunit StfA;
1-188 4.33e-35

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 121.80  E-value: 4.33e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   1 MSKFAKTAIAAAMVMGavVSSSAFAAGNN-GTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTPKDFQIRL 79
Cdd:PRK15283   1 MNTAVKAAVAAALVMG--VSSFANAAGSNtGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  80 QDCVFTTETNMETTFTGTNYAGPANTDNYALFNVDSGvAMNHVSLVIGDTHGKGYKVGEKIVQPIVMDTSTSKGkdKQTL 159
Cdd:PRK15283  79 ENCAFTTEKEASTVFSAIGNESSANPGSVALMRIGGG-EMAGSSIVIGNHLGSAIKLGDAYSENLTMNGSVAAA--KQTL 155

                        170       180       190
                 ....*....|....*....|....*....|.
gi 445954785 160 NFKAWLVGETDAP--DLGQFETLTTFQITYL 188
Cdd:PRK15283 156 NFKAWVKGDSAAStiDTGEFSSTVNFTISYL 186
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 2-188 2.98e-30

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 109.48  E-value: 2.98e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   2 SKFAKTAIAAAMVMGaVVSSSAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGD-IGAAKLTGGGTT--TPKDFQIR 78
Cdd:PRK15261   4 SHFCKLAVTASLVMG-IVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSsIGNGTLSNGKTTinNARTFHID 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  79 LQDCVFTTETNMETTFT---GTNYAGPAnTDNYALFNVDSGVAMNHVSLVIGDTHGKGYKVGEKIVQPIVMDTSTSKGKD 155
Cdd:PRK15261  83 LEGCTWATEKNMNVVFTtgsGTTAATGA-TDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDE 161

                        170       180       190
                 ....*....|....*....|....*....|....
gi 445954785 156 KQTLNFKAWLVG-ETDAPDLGQFETLTTFQITYL 188
Cdd:PRK15261 162 KQSLNFTAWLVGaATGTVGTGEFSSAANVTISYL 195
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
6-187 8.11e-28

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 102.42  E-value: 8.11e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   6 KTAIAAAMVMGAVVSSSAFAAgnNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTT-PKDFQIRLQDCVF 84
Cdd:COG3539    2 KKLLLALLLALALSAAAAAAA--DGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSgPKPFSIKLTNCDA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  85 TTETNMETTFTGTnyagpANTDNYALFNVDSGVAMNHVSLVIGDTHGKGYKVGEKiVQPIVMDTSTSkgkdkQTLNFKAW 164
Cdd:COG3539   80 GTSNSVKVTFTGT-----ADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTP-SSAVTLTSNGS-----ATLPFYAR 148

                        170       180
                 ....*....|....*....|...
gi 445954785 165 LVGETDAPDLGQFETLTTFQITY 187
Cdd:COG3539  149 YVATGATVTAGSFNATATFTIDY 171
PRK15210 PRK15210
fimbrial protein;
10-188 2.70e-13

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 65.10  E-value: 2.70e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  10 AAAMVMGAVVSSSAF--AAGNNGTAR--FYGTIEDSPCSIVPDDHKLEVDMGDIGAAKL-TGGGTTTPKDFQIRLQDCVF 84
Cdd:PRK15210  11 AAGMMYGASVFAADTtpTAGPFGSGKilFTGTITNSPCDIAPGDDAITVPFGQISYRKLnTADATTESKPFTIHLQNCAF 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  85 TTETNMETTFTG------TNYAGPANTDNYALfnVDSGVAMN-HVSLVIGDThgkgykvgEKIVQPivmDTSTSKGKDKQ 157
Cdd:PRK15210  91 DPNIPDTAGSAGkmskvtVSFSGTANTSKKAY--TTSGSAQHvGVQLLKSDN--------TSIIEP---NTPMPDGDAQQ 157

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 445954785 158 ------TLNFKAWLVGETDAPDLGQFETLTTFQITYL 188
Cdd:PRK15210 158 lqagnnELNFFARLIALDNGVTPGDFNASVTYTLKYL 194
PRK09733 PRK09733
fimbrial-like protein;
4-163 1.97e-12

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 62.66  E-value: 1.97e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   4 FAKTAIAAAMVMgaVVSSSAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTPKDFQIRLQDCV 83
Cdd:PRK09733   2 FKKSLLVAGVAM--ILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  84 F----TTETNMETTFTGtnyagpANTDnyalfNVDSGVAMNHVSLVIGDTHGKGYKVGEK------IVQPIVMDTSTSKG 153
Cdd:PRK09733  80 LsqggTTYSKAKVTFTT------ANTM-----TGQSDLLKNTKETEIGGATGVGVRILDSqsgevtLGTPVVITFNNTNS 148

                        170
                 ....*....|
gi 445954785 154 kdKQTLNFKA 163
Cdd:PRK09733 149 --YQELNFKA 156
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 17-187 5.75e-12

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 61.14  E-value: 5.75e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  17 AVVSSSAFAA-GNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTP-KDFQIRLQDCVFTTETNMETTF 94
Cdd:PRK15209  12 ALTSTSVFAAeSGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSaKPFQIKLEDCDITTNKKVNVSF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  95 TGTnyagpANTDNYALFNVDSGV-AMNHVSLVIgdthgkgYKVGEKIVQPIVMDTSTSKGKDKQTLNFKAWLVGETDAPD 173
Cdd:PRK15209  92 NGV-----GDADDSTLVSVSTEAgAATGVGIGI-------YDNANTLVELNTGKSTTTLAAGQTVLYFTANYVSTKDTVT 159

                        170
                 ....*....|....
gi 445954785 174 LGQFETLTTFQITY 187
Cdd:PRK15209 160 TGYGNAEVDFNLSY 173
lpfA PRK15289
fimbrial protein; Provisional
 13-107 5.74e-07

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 47.65  E-value: 5.74e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  13 MVMGAVVSSSAFAAGN----NGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTG-GGTTTPKDFQIRLQDCVfTTE 87
Cdd:PRK15289   5 IIGGAFTLASLMLAGHalaeDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGvGSLASPQKFSIKLENCP-ATY 83

                         90       100
                 ....*....|....*....|....*....
gi 445954785  88 TNMETTFTGTNYAG---------PANTDN 107
Cdd:PRK15289  84 TQAAVRFDGTEAPGgdgdlkvgtPLTAGN 112
PRK09934 PRK09934
fimbriae assembly protein;
12-187 8.24e-07

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 46.81  E-value: 8.24e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  12 AMVMGAVVSSSAFAAGNNGTA--RFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKL-TGGGTTTPKDFQIRLQDCvftTET 88
Cdd:PRK09934   7 ACFCGLLWSPLSWAADPLGEIniELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLlNAGDTTQPVPFSLKLEGC---PPG 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  89 NMETTFTGTNYAGPantdnyALFNVDSGVAMNHVSLVIGDTHGKGYKVGEKiVQPIVMDTSTSKgkdkqTLNFKAWLVGE 168
Cdd:PRK09934  84 SASITFTGTPASDT------NLLALDDPAMAQTVAIEIRDSDRSRLALGQA-SPTVEVDANGNA-----TLNFYANYIAL 151

                        170
                 ....*....|....*....
gi 445954785 169 TDAPDLGQFETLTTFQITY 187
Cdd:PRK09934 152 ADGVQPGVAKADATFMINY 170
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 17-187 1.83e-06

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 46.00  E-value: 1.83e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  17 AVVSSSAFAA----GNNGTARFYGTIEDSPCSIVPDDhkLEVDMGDIGAAKLTGGGTT-TPKDFQIRLQDCVFTTETNME 91
Cdd:PRK15205  13 LLLTASGMAAptdlGPAGDIHFTITIKAKACELEKDS--LEVDMGTMVLQKPVKVGTElNQKNFSIGLKDCDGISKASVT 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  92 TTftgtnyaGPANTDNYALFNVDSGVAMNhVSLVIGDthGKGYKVGEKIVQPIVMDTSTSkGKDKQTLNFKA-WLVGETD 170
Cdd:PRK15205  91 MD-------GSPDPDDPSLFALDAGGATG-VALKIKT--SKGTQQYPKSTDGTPVEWAIN-GDGTTQLNYIAsYVPVNAD 159

                        170
                 ....*....|....*..
gi 445954785 171 ApDLGQFETLTTFQITY 187
Cdd:PRK15205 160 A-TVGTANATVNFSVTY 175
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 1-138 1.86e-06

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 45.96  E-value: 1.86e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   1 MSKFAKTAIAAAMVMGAVVSSSA--FAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTT--PKDFQ 76
Cdd:PRK15187   1 MKKPVLALMVSAIAFGGMLSTAQadTTTVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVAnqKEDFT 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 445954785  77 IRLQDCVFTTETNMETTFTGTNYAGPANTdnyaLFNVDSGVAMNHVSLVIGDTHGKGYKVGE 138
Cdd:PRK15187  81 IKLEDCDTQTSQNAAVIFNGQQDANQPGS----LANTAGAGSATNVALQLYGPDGQALNIGE 138
Fimbrial pfam00419
Fimbrial protein;
34-187 6.05e-05

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 41.27  E-value: 6.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   34 FYGTIE--DSPCSIVPDDhKLEVDMGDIGAAKLTGGG-TTTPKDFQIRLQDCVFTTETNMETTFTGTnyagpANTDNYAL 110
Cdd:pfam00419   3 FTGTVTrvPATCKITAGT-PIEVDFGQIPVNELNAGGeGSRQKPFSITLECSSGSSAVKVTVGLFGT-----ADASSPNL 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  111 FNVDSGVamnhvslviGDTHGKGYKVGEKIVQPIVMDTSTSKGKDKQT------LNFKAWLVG-ETDAPDLGQFETLTTF 183
Cdd:pfam00419  77 LLTGNGA---------GAATGVGIRLYDANGGALPPNNGTSSIPVSATaavatgITFTASLVAtTGGTPTAGDFNATATI 147


                  ....
gi 445954785  184 QITY 187
Cdd:pfam00419 148 VVDY 151
PRK09723 PRK09723
fimbrial-like adhesin;
54-187 2.66e-04

fimbrial-like adhesin;


Pssm-ID: 236617  Cd Length: 421  Bit Score: 40.54  E-value: 2.66e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  54 VDMGDIGAAKLTGGGTTTPkdFQIRLQDCVFTTetNMETTFTGTNYAGpanTDNYALFNVDSG----------------- 116
Cdd:PRK09723 276 VKMGEYSAEQIKNGATPVP--FDISLQNCVRVR--NIETKLVSTKVGT---ENKQLLGNTLTGndaakgvgvlieglkns 348

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 445954785 117 --VAM----NHVSLVIGDTHGKGYKVGEKIVQPIVMDTSTskgkdkQTLNFKAWLVGETDAP-DLGQFETLTTFQITY 187
Cdd:PRK09723 349 ksPQMtlkpNDSTSVYKDYETPDEDDTTGGIYPDQGNGTT------QPLHFQATLKQDGNIAiEPGEFKATSTFQVTY 420
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
3-187 1.49e-03

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 37.63  E-value: 1.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785   3 KFAKTAIAAAM-VMGAVVSSSAFAAG-NNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTG-GGTTTPKDFQIRL 79
Cdd:PRK15194   4 RFISSAIASLLfVAGAAYAADPTPVSvDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAvGNTTALIPFTIQL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  80 QDCVFTTETNMETTFTGTnyAGPANTDNYALFNVDSGVAMNHVSLVIGDTHgkgykvgEKIVQPIVMDTSTSKG--KDKQ 157
Cdd:PRK15194  84 NDCDPVVAATAAVAFSGQ--ADATNDNLLAVASSTNTTTATGVGIEILDNT-------SSILKPDGATFSANQNliEGTN 154

                        170       180       190
                 ....*....|....*....|....*....|
gi 445954785 158 TLNFKAWLVGETDAPDLGQFETLTTFQITY 187
Cdd:PRK15194 155 TLHFSARYKATGTSASAGQANADATFIMKY 184
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 34-184 7.63e-03

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 35.78  E-value: 7.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  34 FYGTIEDSPCSIVPDDHKL-EVDMGDIGAAKLTGGGTTTPKDFQIRLQDCVFTTETNMETTFTGTNYAGPANTDNYALFN 112
Cdd:PRK15288  31 FSGSLVASPCTLTMQGTGIaEVDFSSLDSSDFTPDGQSARKPLVFELTDCDSALSNGVQVTFTGTEATGMRGILAIDSYS 110

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 445954785 113 VDSGVAmnhvslvIGDTHGKGYKVGEKIVQPIVMDTSTSkgkdKQTLNFKAW---LVGETDAPDLGQFETLTTFQ 184
Cdd:PRK15288 111 GASGIG-------IGIETLSGVPVGMNDEEGAIFTLVTG----KNTLSLNAWvqrLPGEDLIPGRFSASALATFE 174
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 15-110 8.73e-03

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 35.46  E-value: 8.73e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  15 MGAVVSSSAFAAgNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGAAKLTGGGTTTP-KDFQIRLQDCvFTTETNMETT 93
Cdd:PRK15191   9 IGMLLAASGVQA-HDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAwQPFAIDLQNC-GSTASGVTVS 86

                         90
                 ....*....|....*..
gi 445954785  94 FTGTnyAGPANTDNYAL 110
Cdd:PRK15191  87 FSGA--ADSRNTDLLAL 101
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 14-96 9.78e-03

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 35.44  E-value: 9.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445954785  14 VMGAVVSSSAFAAGNNgtARFYGTIEDSPCSIVPD-DHKLEVDMGDIGAAKLTGGGTTTPKDFQIRLQDCVFTTETNMET 92
Cdd:PRK15260  15 VMLWAVCNTLPAATPN--VHYSGKLVAGACNLVVDnDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLV 92


                 ....
gi 445954785  93 TFTG 96
Cdd:PRK15260  93 TFQG 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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