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Conserved domains on  [gi|445928352|ref|WP_000006207|]
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MULTISPECIES: FaeA/PapI family transcriptional regulator [Enterobacteriaceae]

Protein Classification

FaeA/PapI family transcriptional regulator( domain architecture ID 10520199)

FaeA/PapI family transcriptional regulator is a fimbrial/pilus regulatory protein, similar to Escherichia coli PapI, a key regulator of the pap pili phase variation, and to Salmonella enterica plasmid-encoded fimbriae rgulatory protein PefI

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FaeA pfam04703
FaeA-like protein; This family represents a number of fimbrial protein transcription ...
 5-64 1.16e-26

FaeA-like protein; This family represents a number of fimbrial protein transcription regulators found in Gram-negative bacteria. These proteins are thought to facilitate binding of the leucine-rich regulatory protein to regulatory elements, possibly by inhibiting deoxyadenosine methylation of these elements by deoxyadenosine methylase.


:

Pssm-ID: 398397  Cd Length: 61  Bit Score: 91.77  E-value: 1.16e-26
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 445928352   5 MKNEILEFLNR-HDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLLK 64
Cdd:pfam04703  1 MKESILTFINSiGAPCKTREIADALGLSAYQARYYLMQLEKEGKIKRSPLRRGASTLWELL 61
 
Name Accession Description Interval E-value
FaeA pfam04703
FaeA-like protein; This family represents a number of fimbrial protein transcription ...
 5-64 1.16e-26

FaeA-like protein; This family represents a number of fimbrial protein transcription regulators found in Gram-negative bacteria. These proteins are thought to facilitate binding of the leucine-rich regulatory protein to regulatory elements, possibly by inhibiting deoxyadenosine methylation of these elements by deoxyadenosine methylase.


Pssm-ID: 398397  Cd Length: 61  Bit Score: 91.77  E-value: 1.16e-26
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 445928352   5 MKNEILEFLNR-HDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLLK 64
Cdd:pfam04703  1 MKESILTFINSiGAPCKTREIADALGLSAYQARYYLMQLEKEGKIKRSPLRRGASTLWELL 61
COG2345 COG2345
Predicted transcriptional regulator, ArsR family [Transcription];
6-57 3.31e-05

Predicted transcriptional regulator, ArsR family [Transcription];


Pssm-ID: 441914 [Multi-domain]  Cd Length: 217  Bit Score: 39.52  E-value: 3.31e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 445928352   6 KNEILEFLNRHDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGM 57
Cdd:COG2345   15 RRRILELLKRAGPVTAAELAEALGLTPNAVRRHLDALEEEGLVERETERRGR 66
 
Name Accession Description Interval E-value
FaeA pfam04703
FaeA-like protein; This family represents a number of fimbrial protein transcription ...
 5-64 1.16e-26

FaeA-like protein; This family represents a number of fimbrial protein transcription regulators found in Gram-negative bacteria. These proteins are thought to facilitate binding of the leucine-rich regulatory protein to regulatory elements, possibly by inhibiting deoxyadenosine methylation of these elements by deoxyadenosine methylase.


Pssm-ID: 398397  Cd Length: 61  Bit Score: 91.77  E-value: 1.16e-26
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 445928352   5 MKNEILEFLNR-HDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLLK 64
Cdd:pfam04703  1 MKESILTFINSiGAPCKTREIADALGLSAYQARYYLMQLEKEGKIKRSPLRRGASTLWELL 61
COG2345 COG2345
Predicted transcriptional regulator, ArsR family [Transcription];
6-57 3.31e-05

Predicted transcriptional regulator, ArsR family [Transcription];


Pssm-ID: 441914 [Multi-domain]  Cd Length: 217  Bit Score: 39.52  E-value: 3.31e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 445928352   6 KNEILEFLNRHDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGM 57
Cdd:COG2345   15 RRRILELLKRAGPVTAAELAEALGLTPNAVRRHLDALEEEGLVERETERRGR 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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