|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
0e+00 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 546.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 SGHWTISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPNLLVTLAAT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLI 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 241 ASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKWQFEST 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 2474800012 321 KKMILLPPLIVASTMLLPLAPMLSIMD 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.20e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 397.25 E-value: 1.20e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 SGHWTISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSiNPNLLVTLAAT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLI 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 241 ASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKWQFEST 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|...
gi 2474800012 321 KKMILLPPLIVASTMLLPLAPML 343
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAI 342
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.51e-125 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 363.76 E-value: 1.51e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 SGHWTISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPNLLVTLAAT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLI 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 241 ASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKWQFeST 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRT-KP 319
|
330 340
....*....|....*....|....*.
gi 2474800012 321 KKMILLPPLIVASTMLLPLAPMLSIM 346
Cdd:MTH00112 320 KKNTLTATLTTLSTLLLPLSPMILTI 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.03e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 352.30 E-value: 5.03e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 SGHWTISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPNLLVTLAAT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLI 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 241 ASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKWQFEST 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*..
gi 2474800012 321 KKMiLLPPLIVASTMLLPLAP-MLSIM 346
Cdd:MTH00070 321 TNN-LLSLTIILSLMLLPITPtILNLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
5-306 |
3.75e-92 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 279.12 E-value: 3.75e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 5 IFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHW 84
Cdd:MTH00041 5 VLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 85 TISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPNLLVTLAATSVLV 164
Cdd:MTH00041 85 SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 165 GGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLIASLI 244
Cdd:MTH00041 165 GGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLF 244
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2474800012 245 LALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFP 306
Cdd:MTH00041 245 ILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFP 306
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
1.11e-91 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 277.62 E-value: 1.11e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 SGHWTISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPNLLVTLAAT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLI 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 241 ASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKWQFEST 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....
gi 2474800012 321 KKmILLPPLIVASTMLLPLAPMLS 344
Cdd:MTH00200 321 SN-LLVGLLLLLSILGLPLTPQLL 343
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
9.02e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 190.10 E-value: 9.02e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLY 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 SGHWTISmipnpiasTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINP-NLLVTLAA 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 160 TSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTwNKSPL 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYK 231
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2474800012 240 IASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW 315
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.29e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 187.34 E-value: 1.29e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLy 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 sghwtISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQIspsINPNLLVTLAAT 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLI 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 241 ASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFpsaNNMKMKWQFEST 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNY---NKNKWNLKKKKN 309
|
330 340
....*....|....*....|....*.
gi 2474800012 321 KKMILLPPLIVASTMLLPLAPMLSIM 346
Cdd:MTH00160 310 KFSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-299 |
2.67e-52 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 175.74 E-value: 2.67e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLY 80
Cdd:MTH00011 3 STFPTMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 SghwtiSMIPNPIASTvITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPNLLVTLAAT 160
Cdd:MTH00011 83 P-----SLLKNITALM-LLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLI 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2474800012 241 ASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYA 299
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-329 |
5.08e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 148.67 E-value: 5.08e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 11 STIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTISMIP 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLSVVL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 91 npiastvITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPsiNPNLLVTLAATSVLVGGWGGL 170
Cdd:MTH00197 85 -------VILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 171 NQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLIASLILALMLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2474800012 251 LGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKWQFESTKKMILLPPL 329
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILLMMML 314
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-299 |
9.97e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 140.64 E-value: 9.97e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 6 FIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAI-IPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHW 84
Cdd:COG1007 104 FYALLLFATLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 85 TISMIPNPIASTV------------ITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPN 152
Cdd:COG1007 184 NLAGIAAALAAGGanspllllglvlVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 153 L-------LVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWM-AAIMVYNP---TLMILNLAIYIMMTLGTFMLFM- 220
Cdd:COG1007 264 LaadwqllLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILl 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 221 ---HNLSTTTLS-LSHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRL 296
Cdd:COG1007 344 lsrKGGEAEEIEdLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
...
gi 2474800012 297 TYA 299
Cdd:COG1007 424 VKA 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.64e-32 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 126.09 E-value: 1.64e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 14 VLGTMIVLFSSHWLMIWIGFEMNMLAI-IPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTISMIPNP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 93 IASTV------------ITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAP----LSVLYQISPSINP---NL 153
Cdd:PRK05777 193 LADGSgnsllllfglvfLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAfavlLRLLVVAFGGLSEdwqQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 154 LVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWM------------AAIMVYnptlmilnLAIYIMMTLGTF----M 217
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvglaagtaegySAVLFY--------LLAYLFMTLGAFgvisL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 218 LFMHNLSTTTLS----LSHTwnkSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFY 293
Cdd:PRK05777 345 LRRKGGEAESISdfagLSKR---SPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYY 421
|
...
gi 2474800012 294 MRL 296
Cdd:PRK05777 422 LRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
5.68e-32 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 121.27 E-value: 5.68e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 23 SSHWLMIWIGFEMNMLAIIP-ILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSG-----------HWTISMIP 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 91 NPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILL-TWQKIAPL-----SVLYQISPSINPNLLVTLAATSVLV 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 165 GGWGGLNQTQLRKILAYSSIAHMGWMAAIM----VYNPTLMILNLAIYIMMTLGTFMLF------MHNlSTTTLSLSHTW 234
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAgsviyrRVH-TRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2474800012 235 NKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITA 286
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-326 |
6.94e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 117.44 E-value: 6.94e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 13 IVLGTMIVLFSSHWLMIWIGFEMNMLAI-IPILMKKSNPRAMEASTKYFLTQATASMLLMLGI-------------IINL 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCallcgttgglhlsYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 79 LYSGHWTISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSInpNLLVTLA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNV--NILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 159 ATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMI----LNLAIYIMMTLGTFM--LFMHNLSTTTLSLSH 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIqaslVYLFIYIIMSICVFSiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 233 TWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLT---YATALTMFPSAN 309
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVkilFFQANSFLLIST 319
|
330
....*....|....*..
gi 2474800012 310 NMKMKWQFESTKKMILL 326
Cdd:MTH00196 320 KILKKENKINLRKALLI 336
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-296 |
7.69e-30 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 118.90 E-value: 7.69e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 6 FIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAI-IPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHW 84
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 85 TISMI-----------PNPIASTV-ITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSI--- 149
Cdd:TIGR01770 184 NFEDLllflsngmlniSLLLLGIVlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 150 ----NPNLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGW-MAAIMVYNPTLM---ILNLAIYIMMTLGTFMLFMh 221
Cdd:TIGR01770 264 fseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIkavLFYIFIYALMSLGAFGVLS- 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 222 nlstTTLSLSHTWNKS-----------PLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNL 290
Cdd:TIGR01770 343 ----LLRSYKDEWIEYisdfaglfktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGA 418
|
....*.
gi 2474800012 291 YFYMRL 296
Cdd:TIGR01770 419 FYYLRV 424
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
4-267 |
3.05e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 117.04 E-value: 3.05e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 4 PIFIIItstIVLGTMIVLFSSHWLMIWIGFEMNMLAI-IPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIinLLYSG 82
Cdd:MTH00199 100 PILILI---VALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCA--LLYGL 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 83 HWTISMIPN------PIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSInpNLLVT 156
Cdd:MTH00199 175 TGETSIQGInsiltgDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVT--NVVLI 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 157 LAATSVLVGGWGGLNQTQLRKILAYSSIAHMG---WMAAIMVYNPTLMIL-NLAIYIMMTLGTFMLFMHNLSTTTL--SL 230
Cdd:MTH00199 253 CAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESIQASLiYMIIYVIMSICSFSIILSLKLTKGLivEV 332
|
250 260 270
....*....|....*....|....*....|....*..
gi 2474800012 231 SHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMII 267
Cdd:MTH00199 333 SGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
1.58e-24 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 103.30 E-value: 1.58e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 14 VLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIinLLYSGHWTISM----- 88
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVG--LLYGATGTLNMadlaa 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 89 ----IPNPIASTV---ITIALAMKLGLSPFHFWVPE-----------VTQGIPLSSGV--ILLTWQKIAPLSVLYQISPs 148
Cdd:COG0651 195 rlaeLDPGLLLAAfalLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFLGT- 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 149 inpnLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWM-AAIMVYNPTLMILNLAIYIMMTLGTFMLFM------H 221
Cdd:COG0651 274 ----LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIlLGLGLGTPLGLAGALFHLLNHALAKALLFLaagaieR 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2474800012 222 NLSTTTLS-LSHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRL 296
Cdd:COG0651 350 ATGTRDLDkLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
6-295 |
3.89e-20 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 91.27 E-value: 3.89e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 6 FIIITSTIVLGTMIVLFSSHWLMIWIGFEMnmLAIIPILMK---KSNPRAMEASTKYFLTQATASMLLMLGIiiNLLY-- 80
Cdd:PRK02504 112 FAAILLTATLGGMFLSGATELVMIFISLET--LSIASYLLTgymKRDPRSNEAALKYLLIGAASSAIFLYGS--SLLYgl 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 81 -SGHWTISMIPNPIA---STVITIAL-------AMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIA----PLSVLYQI 145
Cdd:PRK02504 188 sGGSTQLSAIALALItspSLGLALALvfviagiAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTA 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 146 SPSINPN---LLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNP----TLMILNLAIYIMMTLGTFM- 217
Cdd:PRK02504 268 FPSFDEQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagyASMVFYLLAYLFMNLGAFAc 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 218 LFMHNLSTTTLSLSH---TWNKSPLIaSLILAL-MLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFY 293
Cdd:PRK02504 348 VILFSLRTGTDQISDyagLYQKDPLL-TLGLSLcLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYY 426
|
..
gi 2474800012 294 MR 295
Cdd:PRK02504 427 IR 428
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-263 |
2.91e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 88.52 E-value: 2.91e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 1 MKPPIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPI--LMKKsNPRAMEASTKYFLTQATASMLLMLGIiiNL 78
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLsgYTKK-DVRSNEATMKYLLMGGASSSILVYGF--SW 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 79 LYS---GHWTISMIPNPIAST-------------VITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVL 142
Cdd:CHL00049 185 LYGlsgGEIELQEIVNGLINTqmynspgisialiFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALA 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 143 YQISPSINP-------NLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGW-MAAIMVYNP----TLMILNLAIYIM 210
Cdd:CHL00049 265 TRIFDIPFYfssnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSndgyASMITYMLFYIF 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2474800012 211 MTLGTF---MLFmhNLSTTTLSL---SHTWNKSPLIASLILALMLSLGGLPPLSGFIPK 263
Cdd:CHL00049 345 MNLGTFaciVLF--GLRTGTDNIrdyAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
1.04e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 84.14 E-value: 1.04e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 15 LGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAM---------EASTKYFLTQATASMLLMLGIIINLLYSGH-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 84 ------------WTISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLyqISPSINP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 152 NLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMaAIMVYNPTLMILN-----LAIYIMMTLGTFMLFM------ 220
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFI-LIGVSAGTYESLQaswtyAVTYLVSALASFTVICtleefg 435
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2474800012 221 ---------------HNLSTTTLSLSHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMII 267
Cdd:MTH00198 436 trtptsrqrdgsfgnYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
16-268 |
5.46e-14 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 72.66 E-value: 5.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 16 GTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASmLLMLGIIINLLYSGHWTIS---MIPNP 92
Cdd:TIGR01972 118 GVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGS-LLMLLAILGLYFLGGGTFDlleLLNLP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 93 IASTV-------ITIALAMKLGLSPFHFWVPEV-----TQGIPLSSGVILltwqKIAPLSVLyQISPSINPN-------L 153
Cdd:TIGR01972 197 LPFGVqtwlflaFFIAFAVKVPLFPLHTWLPDAhveapTAGSVILAGVLL----KMGTYGFL-RFNLPLFPDaslyfapV 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 154 LVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAaimvynptlmilnLAIYIMMTLG----TFMLFMHNLSTTTLS 229
Cdd:TIGR01972 272 LAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL-------------LGIFSFNELGisgaVFQMISHGLITAALF 338
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2474800012 230 L--------SHT---------WNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQ 268
Cdd:TIGR01972 339 LlvgvlyerAHTrdiakygglANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILL 394
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
49-300 |
7.54e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 72.49 E-value: 7.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 49 NPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTIS----MIPNPIASTVITIALAM-------KLGLSPFHFWVPE 117
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSellaAAPTILSSPLLTLILLLlllgafgKSAQFPLHFWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 118 VTQG-IPLSS----------GVILLtwqkiAPLSVLYQISPSINPnLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAH 186
Cdd:COG1009 237 AMEGpTPVSAllhaatmvkaGVYLL-----ARLSPLFALSPVWLT-VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQ 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 187 MGWMaaimvynpTLMI----LNLAIYIMMTLGTFM--LFM------HNLSTTTLS-LSHTWNKSPLIASLILALMLSLGG 253
Cdd:COG1009 311 LGYM--------FLALgvgaYVAALFHLLTHAFFKalLFLgagsviHATGTRDIRkMGGLRKKMPITAITFLIGALSLAG 382
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2474800012 254 LPPLSGFIPKWMIIQELTKNDM--IVMPTFMAITALLNLYFYMRLTYAT 300
Cdd:COG1009 383 IPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
50-288 |
1.07e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 71.65 E-value: 1.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 50 PRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTISMIP---NPIASTV-------ITIALAMKLGLSPFHFWVPEV- 118
Cdd:COG1008 157 ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAElaaAPLPLTAqlllflaFFIAFAVKVPMFPFHTWLPDAh 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 119 ----TQGIPLSSGVIL----------------LTWQKIAPLsvlyqispsinpnlLVTLAATSVLVGGWGGLNQTQLRKI 178
Cdd:COG1008 237 veapTAGSVLLAGVLLkmggygllrfalplfpEASAYFAPL--------------LAALGVIGIIYGALVALAQTDLKRL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 179 LAYSSIAHMGWM-AAIMVYNPtlMILNLAIYIMMTLG--TFMLFM------HNLSTTTLS-LSHTWNKSPLIASLILALM 248
Cdd:COG1008 303 IAYSSVSHMGFVlLGIFALNP--LGLQGAVLQMVSHGliTAALFLlvgvlyDRTHTRDIAdLGGLAKRMPVLAALFLLAA 380
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2474800012 249 LSLGGLPPLSGFIPKWMIIQELTKNDMIVmpTFMAITALL 288
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAFQVNPWL--AILAALGLI 418
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-299 |
2.86e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 70.29 E-value: 2.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 49 NPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTISMIPNPIAST--------VITIALAMKLGLSPFHFWVPEVTQ 120
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENptvvtafgFVLLALALKAAVFPLHTWLPRAYP 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 121 GIPLSSGVILLTWQKIAPLSVLYQISPSINP----------NLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGwm 190
Cdd:PRK08375 231 AAPPVVTALLSGLVTKVAVYALIRIYFTVFGgdfrfalglgWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMG-- 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 191 aaimvynptLMILNLAIY--IMMTLGTFMLFMHNLSTTTLSLS--------HTWN---------KSPLIASLILALMLSL 251
Cdd:PRK08375 309 ---------YILLGLALLtpLALAAGLLHLLHHALMKGALFLAagaievtyGTRRlselsglgrRMPLTAAAFAVASLSL 379
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2474800012 252 GGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYA 299
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-298 |
4.54e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 70.00 E-value: 4.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 47 KSNPRAMEASTKYFLTQATASMLLMLGIIInlLYSGHWTISM------------------IPNPIASTVITIALAM---- 104
Cdd:PRK12667 157 RDRGDAVEAAIKYALIGAVGTTLYFLALAF--LYATFGTLNMadlsakirglsfpltgglAGNPPLALGVALALALwaft 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 105 -KLGLSPFHFWVPEVTQGIP-----LSSGVILLT--WQKIAPLSVLYQISPSINP------NLLVTLAATSVLVGGWGGL 170
Cdd:PRK12667 235 iKAAIFPNHFWLPDAHPAAPspvsaMLSGLVVNVgaYAIIRFLYTIFGISPSLIDfraalsPILIILGAVSAIIGALMMV 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 171 NQTQLRKILAYSSIAHMGWMAaIMVYNPTLMILNLAIYIMM--TLGTFMLFM-------HNLSTTTLSLSHTWNKSPLIA 241
Cdd:PRK12667 315 VQKDVKRLLAYSTISHMGYIF-MGIGIGTQLGLAAALFHIInhAIAKSLLFLasgvfihAAGTRDIDELAGLGRKMPIAS 393
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2474800012 242 SLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTY 298
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
6.21e-13 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 62.66 E-value: 6.21e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2474800012 291 YFYMRLTYATALTMFPSANNMKMKWQFESTKKMILLPPLIVASTMLLPLAP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-266 |
9.60e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 68.97 E-value: 9.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 50 PRAMEASTKYFLTQATASMLLMLGIiiNLLYSGHWTISM------------IPNPIASTVITIALAMKLGLSPFHFWVPE 117
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGI--ALLYGQYGTLNMaylavkmsenptVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 118 VTQGIPLSSGVILLTwQKIAPLSVLYQIS-----PSINPN----LLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMG 188
Cdd:PRK08376 246 AYPAAPSSISAMLLV-IKQAGLYALARVLfsiygPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIG 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 189 WM-----AAIMVYNPTLM--------------ILNLAIYIMMTLGTFMLFMHNLSTTTLS----LSHTWNKSpLIASLIL 245
Cdd:PRK08376 325 YMllglgVGLAALGDPAMasygeialaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNelggLARTMPKT-TIAFLIG 403
|
250 260
....*....|....*....|.
gi 2474800012 246 ALMLSlgGLPPLSGFIPKWMI 266
Cdd:PRK08376 404 AAAIV--GLPPFNGFASKWLI 422
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
33-296 |
2.18e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 64.59 E-value: 2.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 33 FEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIiiNLLYSGHWTISMI-------------PNPIASTVIT 99
Cdd:PRK12663 137 FEVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGI--GLLYGTFGTLNMAhiamrlndmgdtaTLTTIALLFL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 100 IALAMKLGLSPFhFWVPEVTQGIPLSSGVI---LLTWQKIAPL----SVLYQISPSINPNLLVTLAATSVLVGGWGGLNQ 172
Cdd:PRK12663 215 LAFGMKAALFPF-MWLPAAYHTPNTEVAALfaaLLTKVGIYALirvfTLLFPQERELLHPLLATMAAITMVIGALGALAY 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 173 TQLRKILAYSSIAHMGWM-AAIMVYNPTLMilNLAIYIM---MTLGTFMLF----MHNLSTTTL--SLSHTWNKSPLIAS 242
Cdd:PRK12663 294 KDIRRIAGYQVISSIGFIlLGLALGTPAGI--NGAIFYLvhdMVVKTALFLiagsLVRLTGYRSlqYLGGLYRKEPLFGA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2474800012 243 LILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRL 296
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-263 |
4.61e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 64.17 E-value: 4.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 52 AMEAstkyfLTQATASMLLML-GIIINLLYSGHWTISMIP-NPIASTVITIALAM-------KLGLSPFHFWVPEVTQG- 121
Cdd:PRK12644 159 ALQA-----LLVTTAGGLAMLvGIIILGQAAGTYRLSELLaDPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAp 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 122 IPLS----------SGVILltwqkIAPLSVLYQISPSINPnLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMA 191
Cdd:PRK12644 234 TPVSaylhaaamvkAGIYL-----VARLAPGFADVPVWRP-TVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLT 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 192 AIMVY-NPTLMILNLAiyimMTLGTFM----LFM------HNLSTTTL-SLSHTWNKSPLIASLILALMLSLGGLPPLSG 259
Cdd:PRK12644 308 VLVGIgTRDAALAGLA----MLLAHALfkaaLFLvvgiidHSTGTRDIrKLSGLGRRQPVLAVVAALAAASMAGLPPLLG 383
|
....
gi 2474800012 260 FIPK 263
Cdd:PRK12644 384 FVAK 387
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
14-307 |
1.73e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.94 E-value: 1.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 14 VLGTMIVLFSSHWLMIWIGFEMNMLA---IIPILMKKSNpramEASTKYFLTQATASMLLMLGIIINLLYSGHWTISMIP 90
Cdd:PRK08668 108 LAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKKESR----KASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADIS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 91 NP-----------IASTVITIALAMKLGLSPFHFWVPEVTQGIPLS-----SGV--------ILLTWQKIAPLSVLYQIS 146
Cdd:PRK08668 184 QGlindtstgfalIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSfsavlSGQlsklgaygFLLVLYVLPGTKLFSEFG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 147 PSINPNL----LVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGW-MAAIMVYNPT------LMILNLAIYIMMTLGT 215
Cdd:PRK08668 264 TYRGVPLfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLgfagglFHVFNHALFKGLFFLI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 216 FMLFMHNLSTTTLS----LSHtwnKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLY 291
Cdd:PRK08668 344 FAAVIYRTGTTKISemggLIE---KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL 420
|
330
....*....|....*.
gi 2474800012 292 FYMRLTYATALTMFPS 307
Cdd:PRK08668 421 YVFRPLAGVFLGQLPS 436
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
27-330 |
4.72e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 57.62 E-value: 4.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 27 LMIWIGFEMNMLAIIPIL-MKKSNPRAMEASTKYFLTQATASMLLMLGIIInlLYSGHWTISMIPNPIASTVIT------ 99
Cdd:MTH00226 154 FMFYILFEGVLIPMYLILgIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFS--LYNIHGTTDYLTLASCSHVVSeqtqkw 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 100 ------IALAMKLGLSPFHFWVPEVTQGIPLSSGV----ILLTWQKIAPLSVLYQISPSINPNL---LVTLAATSVLVGG 166
Cdd:MTH00226 232 iflgifLAMAVKIPIFPFHIWLPKAHVEAPVAGSVllagILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGS 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 167 WGGLNQTQLRKILAYSSIAHMGwMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTW---------NKS 237
Cdd:MTH00226 312 FATCRQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRlikyyrglsITM 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 238 PLIASLILALMLSLGGLPPLSGFIPKWM-IIQELTKNDMI--VMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMK 314
Cdd:MTH00226 391 PIWGTIMIVTSLANVAVPPSGNFIGEYLsILSSFNWNPIIgvFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRR 470
|
330
....*....|....*.
gi 2474800012 315 wQFESTKKMILLPPLI 330
Cdd:MTH00226 471 -EFYITASMVFFAFLI 485
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
13-267 |
4.63e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 54.44 E-value: 4.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 13 IVLGTMIVLFSSHWLMI-WIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTISMIPN 91
Cdd:PRK05846 119 WLEGGVIGVFAALDLLLfYVFFEAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDIA 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 92 PIASTVIT------------IALAMKLGLSPFHFWVPEV-----TQGIPLSSGVILltwqKIAP---LSVLYQISPSINP 151
Cdd:PRK05846 199 DLLNLPLPpgvqywlflaffIAFAVKMPMFPLHTWLPDAhvqapTAGSVLLAGILL----KMGAyglLRFSLPLFPDASH 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 152 N---LLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAaimvynptlmilnLAIYIMMTLG----TFMLFMHNLS 224
Cdd:PRK05846 275 EfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVT-------------LGIFAGNQLGiqgaIFQMISHGLS 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 225 TTTLSLS--------HT---------WNKSPLIASLILALMLSLGGLPPLSGFIPKWMII 267
Cdd:PRK05846 342 SAALFLLvgvlydrlHTrdiadygglAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
44-263 |
1.74e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.12 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 44 LMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTISMI-------PNPIASTVITIALAM----KLGLSPFH 112
Cdd:PRK12650 149 LIARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGIlhsdvwaEKPGLTTVVAVLIAVaaftKSAQFPFH 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 113 FWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPN-----LLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHM 187
Cdd:PRK12650 229 FWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQL 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 188 GWM-AAIMVYNPTLMILNLAIYIMMTLGTFMLFM------HNLSTTTLS-LSHTWNKSPLIASLILALMLSLGGLPPLSG 259
Cdd:PRK12650 309 GWIvATIGVGTPFALTAAVVHTLAHALFKSSLFMligvvdHQAGTRDIRrLGSLWRRMPFTFVSVTIAALSMAAVPPLFG 388
|
....
gi 2474800012 260 FIPK 263
Cdd:PRK12650 389 FVSK 392
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
29-302 |
1.06e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.03 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 29 IWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTIS----MIPNPIASTVITIALAM 104
Cdd:PRK06277 125 LYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITdihnALLVNPTSPVIYGGLLL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 105 KL-------GLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQI-----SPSINPNLLVTLAATSVLVGGWG---G 169
Cdd:PRK06277 205 LIfgllygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLIALSVLAMVFGvvmA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 170 LNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMI-------LNLAIYI-MMTLGTFMLFMHNLSTTTLSLSHTWNKSPLIA 241
Cdd:PRK06277 285 LLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYKsALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVA 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2474800012 242 SLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATAL 302
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYL 425
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-342 |
5.99e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.81 E-value: 5.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 152 NLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIM-MTLGTFMLFM-------HNL 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnHSIVKSALFMvsgsisyHFG 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 224 STTTLSLSHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALT 303
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFE 439
|
170 180 190
....*....|....*....|....*....|....*....
gi 2474800012 304 MfPSANNMKMKWQFESTKKMILLPPLIVASTMLLPLAPM 342
Cdd:PRK12662 440 S-RMVESKANDKAFKTPNAMVLCIWIMAILSIIVGIYPI 477
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
8.91e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 47.25 E-value: 8.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 56 STKYFLTQATASMLLMLGIIInlLYSGHWTISM--IPNPIAS---------TVITIAL----AMKLGLSPFHFWVPEVTQ 120
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAI--LYSVVGTLNMadISVKIAElsagqtgliTVVAILFlfvfATKAGLFPLYFWLPGSYY 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 121 GIPLSSGVI---LLT----WQKIAPLSVLYQISPSINPNLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWM-AA 192
Cdd:PRK07691 238 APPIAIAALfgaLLTkvgvYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIlVG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 193 IMVYNPTLMILnlAIYIMM--TLGTFMLFMhnLSTTTLSLSHTWN---------KSPLIASLILALMLSLGGLPPLSGFI 261
Cdd:PRK07691 318 VAMMTESGMIG--AIYYLIhdMIVKAALFL--LIGIMIKITGTTDlkkmgglikRYPVLGWMFFIAALSLAGIPPLSGFY 393
|
250 260 270
....*....|....*....|....*....|....*
gi 2474800012 262 PKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRL 296
Cdd:PRK07691 394 GKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
4-339 |
1.05e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 47.03 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 4 PIFIIITSTIVLGTMIVLFSSHWLMiwigfeMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLLYSGH 83
Cdd:PRK08667 118 ALFILSMLGVVASANTFSFLFFWEI------MALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 84 WTISMI--PNPIASTVIT---IALAMKLGLSPFHFWVPEVTQGIP-----LSSGVILltwqKIAPLSVLYQISPSINPNL 153
Cdd:PRK08667 192 FELSPLgaSAGILSLVFLllfLGFGIKAGIIPFHKWLPYAHPASPsnvsaLMSGVML----KVAVYGLVRFLMDVLSPEL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 154 -----LVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGW-MAAIMVY-------NPTLMILNL--AIYIMMTLGTFML 218
Cdd:PRK08667 268 wwgvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIiLMGIGLYvifgvygLDTLALLALggALFHSLNHALFKS 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 219 FMHNLSTTTLSLSHTWN---------KSPLIASLILALMLSLGGLPPLSGFIPKWMIIQE----------LTKNDMIVMP 279
Cdd:PRK08667 348 LLFLTAGSVVHATGTRNiekmgglvkLMPYTSALFLVGAVSIAALPPFNGFASELLLYESffqsfsvadpLIKILLFSVL 427
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 280 TFMAITALLNLYFYMRLTYATALTMFPSANNMKMKwqfESTKKMILLPPLIVASTMLLPL 339
Cdd:PRK08667 428 AIFALTSALAAACFVKAFGITFLAMPRSQEARSAK---EVSKPMLIGPAVLAVACLVLGL 484
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-268 |
1.20e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 46.89 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 29 IWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIiiNLLYSGHWTISM---------IPNPIAST--- 96
Cdd:PRK12665 136 LYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGI--ALVYAATGTLNMadlavrldeLPSGTRTAlfa 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 97 VITIALAMKLGLSPFHFWVPE-----------VTQGIPLSSGVILLtwqkIAPLSVLYQiSPSINpNLLVTLAATSVLVG 165
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLTKVGVYAI----IRTHTLLFP-GGGLD-TLLMVVALLTMVVG 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 166 GWGGLNQTQLRKILAYSSIAHMGWMaaimvynptLMILNLAIYIMMTLGTFMLFMHNLSTTTLSL----------SHTWN 235
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYM---------VFGIALSTVAGLSGAIYYVAHHITVQTTLFLvvglierqagSSSLR 358
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2474800012 236 K-------SPLIASLILALMLSLGGLPPLSGFIPKWMIIQ 268
Cdd:PRK12665 359 RlgglakaSPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
52-332 |
1.30e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 46.68 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 52 AMEASTKYFLTQATASMLLMLGIiiNLLYSGHWTISMIP--------NP----IASTVITIALAMKLGLSPFHFWVPEVT 119
Cdd:PRK08377 156 AAEASMKYIVLGGIGSSFFLIGV--ALIYGATGTLNMAHiaqlagtiDPtvaqVGLALLIFGLAVEAELFPLNAWAPDAY 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 120 QGIP------LSSGVILLTWQKIAPLSVLYQISPSINP--NLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMA 191
Cdd:PRK08377 234 QAAPhpitvmFSAFVVKAGLYAMARILYLMQNANGWSSvlKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIA 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 192 AIMVYNPTL--------MILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWNKSPLIASLILALMLSLGGLPPLSGFIPK 263
Cdd:PRK08377 314 LALALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSK 393
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2474800012 264 WMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYatalTMFPSANNMKMKWQFESTKKMILLPPLIVA 332
Cdd:PRK08377 394 FRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIH----TMWFKGEGERIRENAAIGIILLLLAALIVV 458
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-261 |
7.64e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 44.27 E-value: 7.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 100 IALAMKLGLSPFHFWVPEVTQGIPLSSGVIL--------------LTWqkiaPLsvLYQISPSINPnLLVTLAATSVLVG 165
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILagvllklggygfirFSW----PL--LPEASEYFSP-LIQTLSLLAIIYG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 166 GWGGLNQTQLRKILAYSSIAHMGwMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHT---------WNK 236
Cdd:MTH00217 287 SLTTCRQVDLKRIIAYSSVAHMG-LVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTrlikyyrgmVIT 365
|
170 180
....*....|....*....|....*
gi 2474800012 237 SPLIASLILALMLSLGGLPPLSGFI 261
Cdd:MTH00217 366 MPLFGILMLLLVLANASIPLSCNFV 390
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-288 |
8.41e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 44.25 E-value: 8.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 55 ASTKYFLTQATASMLLMLGIIINLLYSGHWTISMIPNPIASTVIT----------IALAMKLGLSPFHFWVP----EVTQ 120
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLAlelllyagflIAFGVKLPIFPLHTWLPdahgEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 121 GIPLSSGVILLTWQKIAPLSVLYQISPSINPNL---LVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMaAIMVYN 197
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFapaLAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV-LLGIAA 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 198 PTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSLSHTWN---------KSPLIASLILALMLSLGGLPPLSGFIPKWMIIQ 268
Cdd:PRK12561 297 FTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSipnmgglakVMPKTFALFTASSMASLALPGMSGFVSELTVFL 376
|
250 260
....*....|....*....|
gi 2474800012 269 ELTKNDmIVMPTFMAITALL 288
Cdd:PRK12561 377 GITSSD-VYSSTFRTITILL 395
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
4-190 |
1.15e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 43.59 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 4 PIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNML---AIIPILMKKSNpraMEASTKYFLTQATASMLLMLGIII---- 76
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVfsaMLIAILSAREN---IDAALKYIFIASTAMIFAFIGLIFlfsl 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 77 --NLLYSG--HWTISMIPNP--------IASTVITIALAMKLGLSPFHFWVPEVTQGIP------LSSGVILLTWQKIAP 138
Cdd:PRK08676 179 trQALGTGtlNWTELAAHASllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPsvvsalLSGTVLNIGIYGILR 258
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2474800012 139 LSVLYQISP--SINPNLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK08676 259 LSALLRQSGaaEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
6-268 |
1.25e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 43.60 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 6 FIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIINLlYSGHWT 85
Cdd:MTH00207 90 FISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL-NQGHWS 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 86 I-SMIPNPIASTV---ITIALAMKLGLSPFHFWVPE-----------VTQGIPLSSGVILLTwqKIAP-LSVLYQISPsi 149
Cdd:MTH00207 169 ItNMWQTDMNNYIalsIMIAAMTKSAQMPFSSWLPAamaaptpvsalVHSSTLVTAGVFLLI--RFYPfLSSTYWFNP-- 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 150 npnLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMG-WMAAIMVYNPTLMILNLAIYIMMTLGTF-----MLFMHNL 223
Cdd:MTH00207 245 ---ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFvcagsLIHSHHH 321
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 2474800012 224 STTTLSLSHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQ 268
Cdd:MTH00207 322 SQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
14-270 |
1.31e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 14 VLGTMIVLFSSHWLMIWIGFE-MNMLAIIPILMKKSNPRAmeasTKYFLTQATASMLLML-GIIINLLYSGHWTISMIPN 91
Cdd:PRK06459 82 ILGMAIVLTSDNYLLFLAGWEiMTIPSYVAIALTKKNKRP----AFVFMAFGELSTVLILaGFAWAFIISGTTNFSYLPS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 92 PIASTVITIALAMKLGLSPFHF--WVPEVTQGIP------LSSGVILLTWQKIAPLSVLYQISPSINPNL-LVTLAATSV 162
Cdd:PRK06459 158 PVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPsnfsaiLSATMTLMGVYGILKMTILTQTIPIGYFGLtILAIGAFSI 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 163 LVGGWGGLNQTQLRKILAYSSIAHMGWMAA-----IMVYNptlMILNLAIYIMMTLGTFMlFMHNLSTTTLSLS------ 231
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQ---LITSIEHFSLITVILYS-FAHSVAKTGLFLSsglqek 313
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2474800012 232 --HTWNKSPLIASLILALML---SLGGLPPLSGFIPKWMIIQEL 270
Cdd:PRK06459 314 qsITYSKKIRNRWIELGLTLlasSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-278 |
1.35e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 43.40 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 13 IVLGTMIVLF-SSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYfLTQATASMLLMLGIIInLLYSGHWTISMI-- 89
Cdd:PRK07234 102 ILHGSVNAAFvCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY-LFYSNVAMLFYLIGAV-LVYQANGTFAFSgl 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 90 --PNPIASTVITIALAMKLGLSPFHFWVPE--VTQGIPLS---SGVILLTwqKIAPLSVLYQISPSINPnLLVTLAATSV 162
Cdd:PRK07234 180 atADPEAFALIALGLLVKGGIFVSGLWLPLthSEAEPPVSallSGVVVKA--GVFPLVRCALDVPGLDL-IVRIFGVGTA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 163 LVGGWGGLNQTQLRKILAYSSIAHMGW-MAAIMVynptlmilnlaiyimmtlGTFMLFMHNLSTTTL--------SLSHT 233
Cdd:PRK07234 257 LLGVLFALLEKDLKRMLAFSTISQLGFiLAAPLV------------------GGLYALAHGLVKSTLflcagalpSRNFT 318
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2474800012 234 WNKSPLIA-----SLILAlMLSLGGLPPLSGFIPKWMIIQELTKNDMIVM 278
Cdd:PRK07234 319 ELISQMLGigkwiPLTMA-SFSIAGFPLLAGFVSKVLTLKNLLPWQAIAL 367
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
98-190 |
1.58e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.54 E-value: 1.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 98 ITIALAMKLGLSPFHFWVPE--VTQGIPLS---SGVILL----------------TWQKIAPlsvlyqispsinpnLLVT 156
Cdd:PRK06473 211 ILVGFGIKIPLVPFHTWLPDahVEASTPVSvllAGVLLKlgtygllrfgvglfpeAWVYLAP--------------WLAT 276
|
90 100 110
....*....|....*....|....*....|....
gi 2474800012 157 LAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK06473 277 WAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-263 |
3.11e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 42.60 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 110 PFHFWVPEVTQG-IPLSSGVILLTWQKiAPLSVLYQISPSINPN-----LLVTLAATSVLVGGWGGLNQTQLRKILAYSS 183
Cdd:PRK12647 213 PFHFWLPNAMEApTPVSAYLHSATMVK-AGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 184 IAHMGWMAAIMVYNPTLMILNLAIYIMM-TLGTFMLFM------HNLSTTTLS-LSHTWNKSPLIASLILALMLSLGGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFLVAhSLYKGALFMvagiidHETGTRDITkLGGLRRAMPITAAAALLAALSMAGLP 371
|
....*...
gi 2474800012 256 PLSGFIPK 263
Cdd:PRK12647 372 PLFGFLAK 379
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
4.77e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.12 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 107 GLSPFHFWVPEVTQGIP------LSSGVILLTWQKIAPLSVLYQISPSINPNLLVTLAATSVLVGGWGGLNQTQLRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASapaaalFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 181 YSSIAHMG--------WMAAIMVYNPTLMILNLaiyimmTLGTFMLFMHNLSTTTLSLS--HTW---------------N 235
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGL------VGGLYHLLNHSLFKSVLFLGagSVWfrtghrdieklggigK 348
|
170 180 190
....*....|....*....|....*....|....*..
gi 2474800012 236 KSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTK 272
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-284 |
6.90e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 41.34 E-value: 6.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 4 PIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPRAMEASTKYFLTQATASMLLMLGIIInLLYSGH 83
Cdd:PRK06589 116 SRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVI-LIYTKT 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 84 WTISMIPNPIASTVITIALAM-------KLGLSPFHFWVPE-----------------VTQGIPLSSGVILLTWqKIAPL 139
Cdd:PRK06589 195 GNLDFVSGGLFSKNQSIILLLmfiygiaKTAIFPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIF-GLSYL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 140 SVLYQISpsinpNLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGW--MAAIMVYNPTLMILNLAIyIMMTLGTFM 217
Cdd:PRK06589 274 QRIFAEF-----NWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHL-VSHSFAKIC 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2474800012 218 LFMHNLSTTTLS-------LSHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAI 284
Cdd:PRK06589 348 LFYSMGSIYSLKkedqvdkLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
100-298 |
1.01e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 40.82 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 100 IALAMKLGLSPFHFWVPEVTQGIPLSSGV----ILLTWQKIAPLSVLYQISPS----INPnLLVTLAATSVLVGGWGGLN 171
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAHVEAPVAGSVilagILLKLGGYGFLRFSWPLFPAaseyFAP-LIVMLSVIAVIYGSLTTCR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 172 QTQLRKILAYSSIAHMGwMAAIMVYNPTLMILNLAIYIMMTLG----------TFMLFMHNLSTTTLSLSHTWNKsPLIA 241
Cdd:MTH00204 296 QVDFKRLIAYSSVAHMG-LVPLGLFTHTIEGLVAAVFLMLAHGfvssalfiavTFLYERHHTRLIKYYRGLTLTM-PLFV 373
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 242 SLILALMLSLGGLPPLSGFIPKWMIIQELTKND--MIVMPTF-MAITALLNLYFYMRLTY 298
Cdd:MTH00204 374 IIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSlgLGVLVTSgMVWSAAYSLYLYNRISF 433
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-268 |
8.38e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 37.95 E-value: 8.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 50 PRAMEASTKYFLTQATASMLLMLGIIINLLYSGHWTIS--MIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSG 127
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGaiAGLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGS 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 128 VILLTWQKIAPLSVLYQISPSInpNLLVTLAATSVLVGGWGGLNQTQLRKILAYSSIAHMGWM-AAIMVynPTLMILNla 206
Cdd:PRK12668 219 VFLSAFTTKTAVYALARAFPGT--ELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMvAGIGI--GTALAIN-- 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2474800012 207 iyimmtlGTF-----------MLFM------HNLSTTTLS-LSHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQ 268
Cdd:PRK12668 293 -------GAVahafnhilykgLLFMsagavlYRTGTEKLTeLGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIIS 365
|
|
| |
